ZRdb KZFP & Repeats
Index

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All KRAB zinc-finger proteins and repeat families in ZRdb. Every name links to its own page with motifs, ChIP-seq evidence and ranked KZFP–repeat associations.

KZFPs 348

KRAB zinc-finger proteins annotated in ZRdb, listed by gene symbol.

PRDM9 RBAK ZFP1 ZFP14 ZFP28 ZFP30 ZFP37 ZFP57 ZFP69 ZFP69B ZFP82 ZFP90 ZFP92 ZIK1 ZIM2 ZIM3 ZKSCAN1 ZKSCAN2 ZKSCAN3 ZKSCAN4 ZKSCAN5 ZKSCAN7 ZKSCAN8 ZNF10 ZNF100 ZNF101 ZNF112 ZNF114 ZNF12 ZNF124 ZNF132 ZNF133 ZNF135 ZNF136 ZNF14 ZNF140 ZNF141 ZNF154 ZNF155 ZNF157 ZNF160 ZNF169 ZNF17 ZNF175 ZNF177 ZNF18 ZNF180 ZNF181 ZNF182 ZNF184 ZNF189 ZNF19 ZNF195 ZNF197 ZNF2 ZNF20 ZNF202 ZNF205 ZNF208 ZNF211 ZNF212 ZNF213 ZNF214 ZNF215 ZNF221 ZNF222 ZNF223 ZNF224 ZNF225 ZNF226 ZNF227 ZNF229 ZNF230 ZNF233 ZNF234 ZNF235 ZNF248 ZNF25 ZNF250 ZNF251 ZNF253 ZNF254 ZNF256 ZNF257 ZNF26 ZNF263 ZNF264 ZNF267 ZNF268 ZNF273 ZNF274 ZNF28 ZNF282 ZNF283 ZNF284 ZNF285 ZNF286A ZNF287 ZNF3 ZNF30 ZNF300 ZNF302 ZNF304 ZNF311 ZNF316 ZNF317 ZNF320 ZNF324 ZNF324B ZNF331 ZNF333 ZNF334 ZNF337 ZNF33A ZNF33B ZNF34 ZNF343 ZNF347 ZNF350 ZNF354A ZNF354B ZNF354C ZNF37A ZNF382 ZNF383 ZNF394 ZNF398 ZNF404 ZNF41 ZNF416 ZNF417 ZNF418 ZNF419 ZNF420 ZNF425 ZNF426 ZNF429 ZNF43 ZNF430 ZNF431 ZNF432 ZNF433 ZNF436 ZNF439 ZNF44 ZNF440 ZNF441 ZNF442 ZNF443 ZNF445 ZNF446 ZNF45 ZNF454 ZNF460 ZNF461 ZNF468 ZNF470 ZNF471 ZNF473 ZNF479 ZNF480 ZNF483 ZNF484 ZNF485 ZNF486 ZNF487 ZNF490 ZNF496 ZNF500 ZNF506 ZNF510 ZNF514 ZNF517 ZNF519 ZNF525 ZNF527 ZNF528 ZNF529 ZNF530 ZNF534 ZNF540 ZNF543 ZNF544 ZNF546 ZNF547 ZNF548 ZNF549 ZNF550 ZNF551 ZNF552 ZNF554 ZNF555 ZNF556 ZNF557 ZNF558 ZNF559 ZNF560 ZNF561 ZNF562 ZNF563 ZNF564 ZNF565 ZNF566 ZNF567 ZNF568 ZNF569 ZNF57 ZNF570 ZNF571 ZNF573 ZNF577 ZNF578 ZNF582 ZNF583 ZNF584 ZNF585A ZNF585B ZNF586 ZNF587 ZNF587B ZNF589 ZNF595 ZNF596 ZNF597 ZNF599 ZNF605 ZNF606 ZNF607 ZNF610 ZNF611 ZNF613 ZNF614 ZNF615 ZNF616 ZNF620 ZNF621 ZNF624 ZNF626 ZNF627 ZNF630 ZNF641 ZNF649 ZNF658 ZNF66 ZNF665 ZNF667 ZNF669 ZNF670 ZNF671 ZNF674 ZNF675 ZNF677 ZNF679 ZNF680 ZNF681 ZNF682 ZNF684 ZNF688 ZNF689 ZNF69 ZNF695 ZNF699 ZNF7 ZNF700 ZNF701 ZNF705A ZNF705B ZNF705D ZNF705E ZNF705G ZNF707 ZNF709 ZNF713 ZNF716 ZNF717 ZNF718 ZNF722P ZNF723 ZNF724 ZNF726 ZNF727 ZNF728 ZNF729 ZNF730 ZNF732 ZNF735 ZNF736 ZNF737 ZNF74 ZNF746 ZNF747 ZNF749 ZNF75A ZNF75CP ZNF75D ZNF761 ZNF763 ZNF764 ZNF765 ZNF766 ZNF77 ZNF772 ZNF773 ZNF776 ZNF777 ZNF778 ZNF780A ZNF780B ZNF782 ZNF785 ZNF786 ZNF789 ZNF790 ZNF791 ZNF792 ZNF793 ZNF799 ZNF8 ZNF805 ZNF808 ZNF81 ZNF813 ZNF814 ZNF816 ZNF823 ZNF829 ZNF836 ZNF84 ZNF840P ZNF844 ZNF845 ZNF846 ZNF85 ZNF850 ZNF852 ZNF860 ZNF875 ZNF878 ZNF879 ZNF880 ZNF888 ZNF891 ZNF90 ZNF91 ZNF92 ZNF93 ZNF98 ZNF99

Repeat families 765

Repeat elements with a consensus sequence, classification and KZFP binding evidence.

ALUJB ALUJO ALUJR ALUJR4 ALUSC ALUSC5 ALUSC8 ALUSG ALUSG4 ALUSG7 ALUSP ALUSQ ALUSQ10 ALUSQ2 ALUSQ4 ALUSX ALUSX1 ALUSX3 ALUSX4 ALUSZ ALUSZ6 ALUY ALUYA5 ALUYA8 ALUYB8 ALUYB9 ALUYC ALUYC3 ALUYD8 ALUYE5 ALUYE6 ALUYF1 ALUYG6 ALUYH3 ALUYH7 ALUYH9 ALUYI6 ALUYI6_4D ALUYJ4 ALUYK11 ALUYK12 ALUYK2 ALUYK3 ALUYK4 ALUYM1 AMNSINE1 AMNSINE2 CR1_MAM CR1-12_AMI CR1-13_AMI CR1-16_AMI CR1-3_CROC CR1-L3A_CROC CR1-L3B_CROC ERV24_PRIM ERV24B_PRIM ERV3-16A3_I ERV3-16A3_LTR ERVL ERVL-B4 ERVL-E ERVL47 FAM FLAM_A FLAM_C FRAM HAL1 HAL1B HAL1M8 HAL1ME HARLEQUIN HERV-FC1 HERV-FC1_LTR1 HERV-FC1_LTR3 HERV-FC2 HERV-FC2_LTR HERV1_I HERV1_LTRA HERV1_LTRB HERV1_LTRC HERV1_LTRD HERV1_LTRE HERV15 HERV16 HERV17 HERV3 HERV30 HERV35I HERV4_I HERV9 HERV9N HERV9NC HERVE HERVE_A HERVFH19 HERVFH21 HERVH HERVH48 HERVI HERVIP10B3 HERVIP10F HERVIP10FH HERVK HERVK11 HERVK11D HERVK13 HERVK14 HERVK14C HERVK22 HERVK3 HERVK9 HERVKC4 HERVL HERVL18 HERVL32 HERVL40 HERVL66 HERVL74 HERVP71A HERVS71 HUERS-P1 HUERS-P2 HUERS-P3 HUERS-P3B L1HS_3END L1M1_5END L1M2_5END L1M2A_5END L1M2A1_5END L1M2B_5END L1M2C_5END L1M3_ORF2 L1M3A_5END L1M3B_5END L1M3C_5END L1M3D_5END L1M3DE_5END L1M3E_5END L1M3F_5END L1M4_5END L1M4A1_5END L1M4A2_5END L1M4B_5END L1M4C_5END L1M5_ORF2 L1M6_5END L1M6B_5END L1M7_5END L1M8_5END L1MA1_3END L1MA10_3END L1MA2_3END L1MA3_3END L1MA4_3END L1MA4A_3END L1MA5_3END L1MA5A_3END L1MA6_3END L1MA7_3END L1MA8_3END L1MA9_3END L1MB1_3END L1MB2_3END L1MB3_3END L1MB4_3END L1MB5_3END L1MB7_3END L1MB8_3END L1MC_ORF2 L1MC1_3END L1MC2_3END L1MC3_3END L1MC4_3END L1MC4A_3END L1MC5_3END L1MC5A_3END L1MCA_5END L1MCB_5END L1MCC_5END L1MD_ORF2 L1MD1_3END L1MD2_3END L1MD3_3END L1MDA_5END L1MDB_5END L1ME1_3END L1ME2_3END L1ME2Z_3END L1ME3_3END L1ME3A_3END L1ME3B_3END L1ME3C_3END L1ME3CZ_3END L1ME3D_3END L1ME3E_3END L1ME3F_3END L1ME3G_3END L1ME4A_3END L1ME4B_3END L1ME4C_3END L1ME5_3END L1MEA_5END L1MEB_5END L1MEC_5END L1MED_5END L1MEF_5END L1MEG_5END L1MEG1_5END L1MEG2_5END L1MEH_5END L1MEI_5END L1MEJ_5END L1P1_5END L1P2_5END L1P3_5END L1P3B_5END L1P4_ORF2 L1P4A_5END L1P4B_5END L1P4C_5END L1P4D_5END L1P4E_5END L1PA10_3END L1PA11_3END L1PA12_3END L1PA13_3END L1PA14_3END L1PA15_3END L1PA15-16_5END L1PA16_3END L1PA17_3END L1PA2_3END L1PA3_3END L1PA4_3END L1PA5_3END L1PA6_3END L1PA7_3END L1PA8_3END L1PA8A_3END L1PB_ORF2 L1PB1_3END L1PB2_3END L1PB3_3END L1PB4_3END L1PBA_5END L1PBA1_5END L1PBB_5END L1PREC2_3END L2 L2-1_AMI L2-1_CRP L2A_3END L2B_3END L2C_3END L3 L3B_3END L4_A_MAM L4_B_MAM L4_C_MAM L5 LFSINE_VERT LOR1-INT LOR1A LOR1B LTR06 LTR1 LTR101_MAM LTR102_MAM LTR103_MAM LTR103B_MAM LTR104_MAM LTR105_MAM LTR106_MAM LTR107_MAM LTR108A_MAM LTR108B_MAM LTR108C_MAM LTR108D_MAM LTR108E_MAM LTR109A2 LTR10A LTR10B LTR10B1 LTR10B2 LTR10C LTR10D LTR10E LTR10F LTR10G LTR12 LTR12B LTR12C LTR12D LTR12E LTR12F LTR13 LTR13A LTR14 LTR14A LTR14B LTR14C LTR15 LTR16 LTR16A LTR16A1 LTR16A2 LTR16B LTR16B1 LTR16B2 LTR16C LTR16D LTR16D1 LTR16D2 LTR16E1 LTR16E2 LTR17 LTR18A LTR18B LTR18C LTR19-INT LTR19A LTR19B LTR19C LTR1A1 LTR1A2 LTR1B LTR1B0 LTR1B1 LTR1C LTR1C1 LTR1C3 LTR1D LTR1D1 LTR1E LTR1F LTR1F1 LTR1F2 LTR2 LTR21A LTR21B LTR21C LTR22 LTR22A LTR22B LTR22B1 LTR22B2 LTR22C LTR22C0 LTR22C2 LTR22E LTR23 LTR23-INT LTR24 LTR24B LTR24C LTR25 LTR25-INT LTR26 LTR26B LTR26C LTR26D LTR26E LTR27 LTR2752 LTR27B LTR27C LTR27D LTR27E LTR28 LTR28B LTR28C LTR29 LTR2B LTR2C LTR3 LTR30 LTR31 LTR32 LTR33 LTR33A LTR33B LTR33C LTR34 LTR35 LTR35A LTR35B LTR36 LTR37-INT LTR37A LTR37B LTR38 LTR38-INT LTR38A1 LTR38B LTR38C LTR39 LTR39-INT LTR3A LTR3B LTR4 LTR40A LTR40A1 LTR40B LTR40C LTR41 LTR41B LTR41C LTR42 LTR43 LTR43-INT LTR43B LTR44 LTR45 LTR45B LTR45C LTR46 LTR46-INT LTR47A LTR47A2 LTR47B LTR47B2 LTR47B3 LTR47B4 LTR48 LTR48B LTR49 LTR49-INT LTR5 LTR5_HS LTR50 LTR51 LTR52 LTR52-INT LTR53 LTR53-INT LTR53B LTR54 LTR54B LTR55 LTR56 LTR57 LTR57-INT LTR58 LTR59 LTR5A LTR5B LTR60 LTR60B LTR61 LTR62 LTR64 LTR65 LTR66 LTR67B LTR68 LTR69 LTR6A LTR6B LTR7 LTR70 LTR71A LTR71B LTR72 LTR72B LTR73 LTR75 LTR75_1 LTR75B LTR76 LTR77 LTR78 LTR78B LTR79 LTR7B LTR7C LTR7Y LTR8 LTR80A LTR80B LTR81 LTR81A LTR81AB LTR81B LTR81C LTR82A LTR82B LTR83 LTR84A LTR84B LTR85A LTR85B LTR85C LTR86A1 LTR86A2 LTR86B1 LTR86B2 LTR86C LTR87 LTR88A LTR88B LTR88C LTR89 LTR8A LTR8B LTR9 LTR90A LTR90B LTR91 LTR9A1 LTR9B LTR9C LTR9D MAM_R4 MAMGYP-INT MAMGYPLTR1A MAMGYPLTR1B MAMGYPLTR1C MAMGYPLTR1D MAMGYPLTR2B MAMGYPLTR2C MAMGYPLTR3 MAMGYPLTR3A MAMGYPSY2-I MAMGYPSY2-LTR MAMREP1151 MAMREP1527 MAMREP605 MAMRTE1 MAMSINE1 MER101 MER101-INT MER101B MER110 MER110-INT MER110A MER11A MER11B MER11C MER11D MER129 MER21-INT MER21A MER21B MER21C MER31-INT MER31A MER31B MER34 MER34-INT MER34A MER34A1 MER34B MER34B-INT MER34C MER34C2 MER34D MER39 MER39B MER4-INT MER41-INT MER41A MER41B MER41C MER41D MER41E MER41G MER48 MER49 MER4A MER4A1 MER4B MER4B-INT MER4C MER4CL34 MER4D MER4D0 MER4D1 MER4E MER4E1 MER50 MER50-INT MER50B MER50C MER51-INT MER51A MER51B MER51C MER51D MER51E MER52-INT MER52A MER52C MER52D MER54A MER54B MER57-INT MER57A-INT MER57A1 MER57B1 MER57B2 MER57C1 MER57C2 MER57D MER57E1 MER57E2 MER57E3 MER57F MER61-INT MER61A MER61B MER61C MER61D MER61E MER61F MER65-INT MER65A MER65B MER65C MER65D MER66-INT MER66A MER66B MER66C MER66D MER67A MER67B MER67C MER67D MER68 MER68-INT MER68B MER68C MER70-INT MER70A MER70B MER70C MER72 MER72B MER73 MER74A MER74B MER74C MER76 MER76-INT MER77 MER77B MER83 MER83A-INT MER83B MER83B-INT MER83C MER84 MER84-INT MER87 MER87B MER88 MER89 MER89-INT MER90 MER90A MER92-INT MER92A MER92B MER92C MER92D MER95 MER9A1 MER9A2 MER9A3 MER9B MIR MIR1_AMN MIR3 MIRB MIRC MLT-INT MLT1-INT MLT1A MLT1A0 MLT1A1 MLT1B MLT1C MLT1D MLT1E MLT1E1 MLT1E1A MLT1E2 MLT1E3 MLT1F MLT1F-INT MLT1F1 MLT1F2 MLT1G MLT1G1 MLT1G3 MLT1H MLT1H-INT MLT1H1 MLT1H2 MLT1I MLT1J MLT1J-INT MLT1J1 MLT1J2 MLT1K MLT1L MLT1M MLT1N2 MLT1O MLT2A1 MLT2A2 MLT2B1 MLT2B2 MLT2B3 MLT2B4 MLT2B5 MLT2C1 MLT2C2 MLT2D MLT2E MLT2F MST-INT MSTA MSTA1 MSTB MSTB1 MSTB2 MSTC MSTD PABL_A PABL_A-INT PABL_B PABL_B-INT PENELOPE1_VERT PLAT_L3 PRIMA4_LTR PRIMA4-INT PRIMA41-INT PRIMAX-INT PRIMLTR79 SVA_A SVA_B SVA_C SVA_D SVA_E SVA_F THE1-INT THE1A THE1B THE1C THE1D THE1D-INT UCON51 UCON86 X1_LINE X2_LINE X5B_LINE X6A_LINE X6B_LINE X7A_LINE X7B_LINE X7C_LINE X7D_LINE X8_LINE X9_LINE