ZRdb KZFP & Repeats
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Human_ZNF101

  • Protein
    Zinc finger protein 101
  • Length
    436
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    43.0 Mya
  • Time of Changing in binding specificity
    43.0 Mya
  • Uniprot_ID
    Q8IZC7
  • NCBI_ID
    94039
Sequence:
MDSVAFEDVAVNFTQEEWALLSPSQKNLYRDVTLETFRNLASVGIQWKDQDIENLYQNLGIKLRSLVERLCGRKEGNEHRETFSQIPDCHLNKKSQTGVKPCKCSVCGKVFLRHSFLDRHMRAHAGHKRSECGGEWRETPRKQKQHGKASISPSSGARRTVTPTRKRPYECKVCGKAFNSPNLFQIHQRTHTGKRSYKCREIVRAFTVSSFFRKHGKMHTGEKRYECKYCGKPIDYPSLFQIHVRTHTGEKPYKCKQCGKAFISAGYLRTHEIRSHALEKSHQCQECGKKLSCSSSLHRHERTHSGGKLYECQKCAKVFRCPTSLQAHERAHTGERPYECNKCGKTFNYPSCFRRHKKTHSGEKPYECTRCGKAFGWCSSLRRHEMTHTGEKPFDCKQCGKVFTFSNYLRLHERTHLAGRSQCFGRRQGDHLSPGV
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
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# Domain name Pos
1 KRAB 4..82
2 C2h2 102..124
3 C2h2 169..191
4 dec2h2 197..219
5 C2h2 225..247
6 C2h2 253..276
7 C2h2 282..304
8 C2h2 310..332
9 C2h2 338..360
10 C2h2 366..388
11 C2h2 394..416
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II transcription regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 1339 **** 99.0 Weakly correlated
2 AluSx1 1016 **** 74.0 Weakly correlated
3 AluSx 951 **** 74.0 Weakly correlated
4 L2a 933 **** 99.0 Weakly correlated
5 MIR 909 **** 99.0 Weakly correlated
6 AluJb 908 **** 74.0 Weakly correlated
7 AluY 807 **** 74.0 Weakly correlated
8 AluSz 778 **** 74.0 Weakly correlated
9 L2c 699 **** 99.0 Weakly correlated
10 MIRc 684 **** 99.0 Weakly correlated
11 MIR3 639 **** 99.0 Weakly correlated
12 L2b 610 **** 99.0 Weakly correlated
13 AluJr 593 **** 74.0 Weakly correlated
14 AluJo 579 **** 74.0 Weakly correlated
15 AluSq2 463 **** 74.0 Weakly correlated
16 AluSp 436 **** 74.0 Weakly correlated
17 AluSz6 323 **** 74.0 Weakly correlated
18 AluSg 314 **** 74.0 Weakly correlated
19 L2 291 **** 99.0 Weakly correlated
20 AluSc 283 **** 74.0 Weakly correlated
21 AluSx3 270 **** 74.0 Weakly correlated
22 L3 203 **** 99.0 Weakly correlated
23 L1M5 162 n.s 99.0 Weakly correlated
24 AluSc8 153 **** 74.0 Weakly correlated
25 FLAM_C 141 **** 74.0 Weakly correlated
26 L1MC4 140 *** 99.0 Weakly correlated
27 AluSq 138 **** 74.0 Weakly correlated
28 L1ME4a 114 ** 99.0 Weakly correlated
29 MIR1_Amn 109 **** 319.0 Weakly correlated
30 AluSx4 98 **** 74.0 Weakly correlated
31 AluJr4 95 **** 74.0 Weakly correlated
32 L1MC5a 95 **** 99.0 Weakly correlated
33 L1ME1 90 n.s 99.0 Weakly correlated
34 L1MB7 88 n.s 99.0 Weakly correlated
35 MLT1C 85 n.s 94.0 Weakly correlated
36 MLT1K 82 **** 99.0 Weakly correlated
37 L1MB3 78 n.s 99.0 Weakly correlated
38 HAL1 74 n.s 99.0 Weakly correlated
39 L1ME4b 73 n.s 99.0 Weakly correlated
40 L1ME3G 71 ** 99.0 Weakly correlated
41 L1MEc 71 n.s 99.0 Weakly correlated
42 MLT1B 71 n.s 99.0 Weakly correlated
43 L1PA3 66 n.s 19.6 Weakly correlated
44 MamRTE1 65 **** 99.0 Weakly correlated
45 L3b 62 **** 99.0 Weakly correlated
46 AluSg4 61 **** 74.0 Weakly correlated
47 AluSg7 60 **** 74.0 Weakly correlated
48 FLAM_A 59 **** 74.0 Weakly correlated
49 L1M4 59 n.s 99.0 Weakly correlated
50 L1MB8 59 n.s 99.0 Weakly correlated
51 L1MC5 59 n.s 99.0 Weakly correlated
52 L1MA9 56 n.s 99.0 Weakly correlated
53 L1ME3Cz 56 * 99.0 Weakly correlated
54 FRAM 55 **** 74.0 Weakly correlated
55 L1PA2 55 n.s 15.2 Weakly correlated
56 L1MEd 54 n.s 99.0 Weakly correlated
57 AluSc5 53 **** 74.0 Weakly correlated
58 LTR8 52 **** 43.0 Highly correlated
59 MLT1D 52 n.s 99.0 Weakly correlated
60 L1MB2 51 n.s 99.0 Weakly correlated
61 L1PB1 49 n.s 74.0 Weakly correlated
62 MLT1J 49 n.s 99.0 Weakly correlated
63 AluYc 47 **** 74.0 Weakly correlated
64 LTR13 45 **** 19.6 Weakly correlated
65 Alu 44 **** 74.0 Weakly correlated
66 L1ME2 44 n.s 99.0 Weakly correlated
67 MLT1I 44 ** 99.0 Weakly correlated
68 L1MEf 43 n.s 99.0 Weakly correlated
69 L1PA16 43 n.s 74.0 Weakly correlated
70 L1MC3 42 n.s 99.0 Weakly correlated
71 L1ME3A 42 n.s 99.0 Weakly correlated
72 L1MEg 42 n.s 99.0 Weakly correlated
73 MLT1H 42 n.s 99.0 Weakly correlated
74 AluYj4 41 **** 0.0 Weakly correlated
75 L1MC4a 41 n.s 99.0 Weakly correlated
76 MLT1A0 41 n.s 99.0 Weakly correlated
77 L1ME4c 38 ** 99.0 Weakly correlated
78 L1PA5 38 n.s 19.6 Weakly correlated
79 MLT1L 38 n.s 99.0 Weakly correlated
80 AluYm1 36 **** 19.6 Weakly correlated
81 L1MD2 36 n.s 99.0 Weakly correlated
82 L1M1 35 n.s 74.0 Weakly correlated
83 L1MA4 35 n.s 87.0 Weakly correlated
84 L1MB5 35 n.s 99.0 Weakly correlated
85 L1ME3B 35 n.s 99.0 Weakly correlated
86 MSTB1 34 ** 74.0 Weakly correlated
87 AluYh3 33 **** 15.2 Weakly correlated
88 ERVL-E-int 33 n.s 99.0 Weakly correlated
89 L1MA8 32 n.s 87.0 Weakly correlated
90 AmnSINE1 31 **** 319.0 Weakly correlated
91 L4_A_Mam 31 ** 99.0 Weakly correlated
92 ERV3-16A3_I-int 30 n.s 99.0 Weakly correlated
93 SVA_D 30 n.s 15.2 Weakly correlated
94 L1PA13 29 n.s 74.0 Weakly correlated
95 HUERS-P3-int 28 **** 43.0 Highly correlated
96 L1MB4 28 n.s 99.0 Weakly correlated
97 L1ME2z 28 n.s 99.0 Weakly correlated
98 L1ME3 28 n.s 99.0 Weakly correlated
99 L1MC1 27 n.s 99.0 Weakly correlated
100 L1MD 27 n.s 99.0 Weakly correlated
101 MamSINE1 27 **** 99.0 Weakly correlated
102 L1PA4 26 n.s 19.6 Weakly correlated
103 LTR33 26 n.s 99.0 Weakly correlated
104 L1M2 25 n.s 99.0 Weakly correlated
105 L1MA7 25 n.s 87.0 Weakly correlated
106 L1MC 25 n.s 99.0 Weakly correlated
107 L1MCa 25 n.s 99.0 Weakly correlated
108 LTR50 25 **** 99.0 Weakly correlated
109 MLT1A 25 n.s 99.0 Weakly correlated
110 MLT1E2 25 n.s 99.0 Weakly correlated
111 MLT1J2 25 * 99.0 Weakly correlated
112 L1MA3 24 n.s 74.0 Weakly correlated
113 L1MD3 24 n.s 99.0 Weakly correlated
114 LTR41C 24 **** 99.0 Weakly correlated
115 MER39 24 ** 74.0 Weakly correlated
116 MER21C 23 n.s 99.0 Weakly correlated
117 MSTA 23 n.s 43.0 Highly correlated
118 HAL1ME 22 n.s 99.0 Weakly correlated
119 L1PA15 22 n.s 74.0 Weakly correlated
120 AluSq4 21 **** 74.0 Weakly correlated
121 L1M6 21 n.s 99.0 Weakly correlated
122 L1MA2 21 n.s 74.0 Weakly correlated
123 L1MEi 21 n.s 99.0 Weakly correlated
124 L4_C_Mam 21 * 99.0 Weakly correlated
125 MLT1N2 21 * 99.0 Weakly correlated
126 MamGypLTR3 21 **** 99.0 Weakly correlated
127 THE1B 21 n.s 43.0 Highly correlated
128 HERVH-int 20 n.s 28.9 Weakly correlated
129 HERVK-int 20 **** 28.9 Weakly correlated
130 MLT1F 20 n.s 99.0 Weakly correlated
131 AluYa5 19 n.s 15.2 Weakly correlated
132 L1ME3F 19 n.s 99.0 Weakly correlated
133 L1PB4 19 n.s 99.0 Weakly correlated
134 LTR10A 19 **** 28.9 Weakly correlated
135 LTR71B 19 **** 43.0 Highly correlated
136 Plat_L3 19 **** 99.0 Weakly correlated
137 L1M3 18 n.s 99.0 Weakly correlated
138 L1MA4A 18 n.s 87.0 Weakly correlated
139 L1MA6 18 n.s 87.0 Weakly correlated
140 L1PA6 18 n.s 28.9 Weakly correlated
141 L1PA7 18 n.s 74.0 Weakly correlated
142 MLT1H2 18 n.s 99.0 Weakly correlated
143 MLT1J1 18 n.s 99.0 Weakly correlated
144 MLT1O 18 * 99.0 Weakly correlated
145 FAM 17 ** 87.0 Weakly correlated
146 LTR16A 17 n.s 99.0 Weakly correlated
147 LTR8B 17 ** 43.0 Highly correlated
148 MamRep605 17 * 99.0 Weakly correlated
149 AluYb8 16 * 15.2 Weakly correlated
150 L1MA5 16 n.s 87.0 Weakly correlated
151 L1MC2 16 n.s 99.0 Weakly correlated
152 LTR16A1 16 ** 99.0 Weakly correlated
153 LTR41B 16 **** 99.0 Weakly correlated
154 MER50 16 n.s 43.0 Highly correlated
155 MLT1F1 16 n.s 99.0 Weakly correlated
156 MLT1F2 16 n.s 99.0 Weakly correlated
157 MLT2F 16 ** 99.0 Weakly correlated
158 AluSq10 15 *** 74.0 Weakly correlated
159 AluYf1 15 ** 19.6 Weakly correlated
160 ERVL-B4-int 15 n.s 99.0 Weakly correlated
161 L1P4 15 n.s 74.0 Weakly correlated
162 L1PA17 15 n.s 74.0 Weakly correlated
163 L1PA8 15 n.s 74.0 Weakly correlated
164 LTR41 15 **** 99.0 Weakly correlated
165 MSTD 15 n.s 74.0 Weakly correlated
166 THE1D 15 n.s 43.0 Highly correlated
167 L1MB1 14 n.s 99.0 Weakly correlated
168 L1MD1 14 n.s 99.0 Weakly correlated
169 L1P1 14 n.s 19.6 Weakly correlated
170 L1MDa 13 n.s 99.0 Weakly correlated
171 L1PA10 13 n.s 74.0 Weakly correlated
172 MER34 13 *** 87.0 Weakly correlated
173 MER4-int 13 n.s 74.0 Weakly correlated
174 MER4A 13 *** 74.0 Weakly correlated
175 MER66B 13 ** 43.0 Highly correlated
176 MER89 13 ** 99.0 Weakly correlated
177 MLT1M 13 *** 99.0 Weakly correlated
178 MSTB 13 n.s 43.0 Highly correlated
179 AluYe5 12 *** 74.0 Weakly correlated
180 ERV24B_Prim-int 12 **** 74.0 Weakly correlated
181 HUERS-P3b-int 12 ** 43.0 Highly correlated
182 L1ME5 12 n.s 99.0 Weakly correlated
183 L1P3 12 n.s 74.0 Weakly correlated
184 LTR37A 12 ** 99.0 Weakly correlated
185 LTR9 12 *** 43.0 Highly correlated
186 MLT1G 12 n.s 99.0 Weakly correlated
187 MLT2D 12 n.s 99.0 Weakly correlated
188 HERV4_I-int 11 **** 43.0 Highly correlated
189 HERVL40-int 11 * 99.0 Weakly correlated
190 L1ME3D 11 n.s 99.0 Weakly correlated
191 L1PA15-16 11 n.s 74.0 Weakly correlated
192 L1PB 11 n.s 74.0 Weakly correlated
193 L1PB3 11 n.s 74.0 Weakly correlated
194 L1PREC2 11 n.s 43.0 Highly correlated
195 LFSINE_Vert 11 *** 319.0 Weakly correlated
196 LTR16C 11 n.s 99.0 Weakly correlated
197 LTR49-int 11 n.s 74.0 Weakly correlated
198 MLT2B4 11 n.s 99.0 Weakly correlated
199 CR1_Mam 10 ** 99.0 Weakly correlated
200 HERV9N-int 10 * 19.6 Weakly correlated
201 HERV9NC-int 10 n.s 19.6 Weakly correlated
202 L1M4b 10 n.s 99.0 Weakly correlated
203 L1M4c 10 n.s 99.0 Weakly correlated
204 L1ME3C 10 n.s 99.0 Weakly correlated
205 L1PA11 10 n.s 74.0 Weakly correlated
206 LTR104_Mam 10 ** 99.0 Weakly correlated
207 LTR37-int 10 * 99.0 Weakly correlated
208 LTR67B 10 n.s 99.0 Weakly correlated
209 LTR79 10 n.s 99.0 Weakly correlated
210 LTR88b 10 *** 99.0 Weakly correlated
211 MER49 10 n.s 43.0 Highly correlated
212 MER67C 10 n.s 99.0 Weakly correlated
213 MER68 10 n.s 99.0 Weakly correlated
214 MLT1A1 10 n.s 87.0 Weakly correlated
215 MLT1E3 10 n.s 99.0 Weakly correlated
216 MLT1G3 10 n.s 99.0 Weakly correlated
217 SVA_E 10 ** 0.0 Weakly correlated
218 CR1-3_Croc 9 *** 319.0 Weakly correlated
219 HERVFH21-int 9 **** 28.9 Weakly correlated
220 L1M3f 9 n.s 87.0 Weakly correlated
221 L1MA10 9 n.s 99.0 Weakly correlated
222 L1ME3E 9 n.s 99.0 Weakly correlated
223 L1PA14 9 n.s 74.0 Weakly correlated
224 LTR12C 9 n.s 19.6 Weakly correlated
225 LTR33A 9 n.s 99.0 Weakly correlated
226 LTR7 9 n.s 19.6 Weakly correlated
227 LTR78 9 n.s 99.0 Weakly correlated
228 LTR83 9 **** 99.0 Weakly correlated
229 MER31A 9 n.s 87.0 Weakly correlated
230 MER31B 9 n.s 99.0 Weakly correlated
231 MER4B-int 9 n.s 99.0 Weakly correlated
232 MER4D 9 n.s 74.0 Weakly correlated
233 MER4D1 9 n.s 74.0 Weakly correlated
234 MER57E3 9 **** 74.0 Weakly correlated
235 MER74A 9 n.s 99.0 Weakly correlated
236 MER77 9 n.s 99.0 Weakly correlated
237 MLT1E1A 9 n.s 99.0 Weakly correlated
238 MamGypsy2-I 9 n.s 99.0 Weakly correlated
239 SVA_A 9 * 19.6 Weakly correlated
240 ERV24_Prim-int 8 ** 74.0 Weakly correlated
241 L1M3e 8 n.s 99.0 Weakly correlated
242 L1M4a1 8 n.s 99.0 Weakly correlated
243 L1MCc 8 n.s 99.0 Weakly correlated
244 L1MDb 8 n.s 99.0 Weakly correlated
245 L1MEh 8 n.s 99.0 Weakly correlated
246 L1PB2 8 n.s 74.0 Weakly correlated
247 L1PBa 8 n.s 74.0 Weakly correlated
248 LTR16A2 8 n.s 99.0 Weakly correlated
249 LTR24 8 **** 74.0 Weakly correlated
250 LTR33A_ 8 n.s 99.0 Weakly correlated
251 LTR54 8 * 74.0 Weakly correlated
252 LTR5_Hs 8 n.s 0.0 Weakly correlated
253 LTR65 8 **** 99.0 Weakly correlated
254 LTR85a 8 * 99.0 Weakly correlated
255 MER21A 8 n.s 74.0 Weakly correlated
256 MER50-int 8 n.s 43.0 Highly correlated
257 MER65-int 8 n.s 87.0 Weakly correlated
258 MER77B 8 n.s 99.0 Weakly correlated
259 MLT1G1 8 n.s 99.0 Weakly correlated
260 MLT2B3 8 n.s 99.0 Weakly correlated
261 Penelope1_Vert 8 **** 319.0 Weakly correlated
262 HAL1M8 7 n.s 99.0 Weakly correlated
263 HERV17-int 7 n.s 28.9 Weakly correlated
264 HERVFH19-int 7 *** 43.0 Highly correlated
265 HERVH48-int 7 ** 28.9 Weakly correlated
266 L1M7 7 n.s 99.0 Weakly correlated
267 L1MA1 7 n.s 74.0 Weakly correlated
268 L1MA5A 7 n.s 87.0 Weakly correlated
269 L1MCb 7 n.s 99.0 Weakly correlated
270 L1MEb 7 n.s 99.0 Weakly correlated
271 L2-1_AMi 7 ** 319.0 Weakly correlated
272 L2-3_Crp 7 n.s 431.0 Weakly correlated
273 L4_B_Mam 7 n.s 99.0 Weakly correlated
274 LOR1-int 7 n.s 74.0 Weakly correlated
275 LTR101_Mam 7 * 99.0 Weakly correlated
276 LTR12E 7 *** 19.6 Weakly correlated
277 LTR13_ 7 **** 28.9 Weakly correlated
278 LTR18A 7 **** 43.0 Highly correlated
279 LTR43 7 ** 74.0 Weakly correlated
280 LTR48 7 n.s 74.0 Weakly correlated
281 LTR78B 7 n.s 99.0 Weakly correlated
282 MER101-int 7 n.s 74.0 Weakly correlated
283 MER34D 7 **** 74.0 Weakly correlated
284 MER39B 7 n.s 74.0 Weakly correlated
285 MER41B 7 n.s 74.0 Weakly correlated
286 MER51E 7 **** 43.0 Highly correlated
287 MER52D 7 n.s 74.0 Weakly correlated
288 MER65A 7 n.s 74.0 Weakly correlated
289 MER90 7 ** 99.0 Weakly correlated
290 MamGypsy2-LTR 7 **** 99.0 Weakly correlated
291 MamRep1151 7 n.s 99.0 Weakly correlated
292 PRIMA41-int 7 n.s 74.0 Weakly correlated
293 SVA_B 7 n.s 15.2 Weakly correlated
294 SVA_F 7 n.s 0.0 Weakly correlated
295 THE1C 7 n.s 43.0 Highly correlated
296 X7A_LINE 7 *** 319.0 Weakly correlated
297 AluYc3 6 ** 74.0 Weakly correlated
298 AmnSINE2 6 **** 319.0 Weakly correlated
299 HAL1b 6 n.s 99.0 Weakly correlated
300 HERVI-int 6 ** 28.9 Weakly correlated
301 HERVK22-int 6 n.s 43.0 Highly correlated
302 L1HS 6 n.s 8.6 Weakly correlated
303 L1M4a2 6 n.s 99.0 Weakly correlated
304 L1P4a 6 n.s 74.0 Weakly correlated
305 LTR14B 6 ** 28.9 Weakly correlated
306 LTR16E1 6 n.s 99.0 Weakly correlated
307 LTR37B 6 n.s 99.0 Weakly correlated
308 LTR44 6 **** 74.0 Weakly correlated
309 LTR82B 6 n.s 99.0 Weakly correlated
310 LTR85b 6 * 99.0 Weakly correlated
311 LTR8A 6 n.s 43.0 Highly correlated
312 MER110A 6 ** 99.0 Weakly correlated
313 MER21-int 6 n.s 99.0 Weakly correlated
314 MER21B 6 n.s 99.0 Weakly correlated
315 MER41A 6 n.s 74.0 Weakly correlated
316 MER4B 6 n.s 74.0 Weakly correlated
317 MER4CL34 6 n.s 43.0 Highly correlated
318 MER52-int 6 n.s 99.0 Weakly correlated
319 MER57A1 6 n.s 43.0 Highly correlated
320 MER57B2 6 n.s 43.0 Highly correlated
321 MER65C 6 * 74.0 Weakly correlated
322 MLT1H1 6 n.s 99.0 Weakly correlated
323 MLT2B2 6 n.s 99.0 Weakly correlated
324 MSTC 6 n.s 74.0 Weakly correlated
325 THE1B-int 6 n.s 43.0 Highly correlated
326 X6A_LINE 6 *** 99.0 Weakly correlated
327 AluYk2 5 n.s 19.6 Weakly correlated
328 HERV9-int 5 n.s 28.9 Weakly correlated
329 HERVE-int 5 n.s 19.6 Weakly correlated
330 HERVIP10F-int 5 n.s 28.9 Weakly correlated
331 HERVIP10FH-int 5 n.s 28.9 Weakly correlated
332 HERVL18-int 5 n.s 43.0 Highly correlated
333 HERVL74-int 5 * 99.0 Weakly correlated
334 HERVS71-int 5 n.s 28.9 Weakly correlated
335 L1MEg2 5 n.s 99.0 Weakly correlated
336 L1P2 5 n.s 28.9 Weakly correlated
337 L1PA8A 5 n.s 74.0 Weakly correlated
338 L5 5 * 99.0 Weakly correlated
339 LTR10E 5 ** 28.9 Weakly correlated
340 LTR16D 5 n.s 99.0 Weakly correlated
341 LTR18B 5 * 43.0 Highly correlated
342 LTR1A2 5 n.s 43.0 Highly correlated
343 LTR43-int 5 ** 74.0 Weakly correlated
344 LTR45B 5 ** 74.0 Weakly correlated
345 LTR54B 5 n.s 74.0 Weakly correlated
346 LTR56 5 n.s 74.0 Weakly correlated
347 LTR82A 5 n.s 99.0 Weakly correlated
348 LTR84b 5 n.s 99.0 Weakly correlated
349 LTR88a 5 ** 99.0 Weakly correlated
350 LTR88c 5 * 99.0 Weakly correlated
351 MER110 5 * 99.0 Weakly correlated
352 MER41D 5 ** 74.0 Weakly correlated
353 MER4A1 5 n.s 74.0 Weakly correlated
354 MER51-int 5 n.s 43.0 Highly correlated
355 MER57-int 5 n.s 87.0 Weakly correlated
356 MER57B1 5 n.s 43.0 Highly correlated
357 MER66C 5 * 43.0 Highly correlated
358 MER67B 5 * 99.0 Weakly correlated
359 MLT2B1 5 n.s 99.0 Weakly correlated
360 MLT2C1 5 n.s 99.0 Weakly correlated
361 MamGypLTR1b 5 n.s 99.0 Weakly correlated
362 MamGypLTR3a 5 n.s 99.0 Weakly correlated
363 Mam_R4 5 ** 99.0 Weakly correlated
364 X2_LINE 5 **** 319.0 Weakly correlated
365 X6B_LINE 5 ** 99.0 Weakly correlated
366 AluYa8 4 *** 15.2 Weakly correlated
367 AluYk3 4 n.s 19.6 Weakly correlated
368 AluYk4 4 n.s 15.2 Weakly correlated
369 CR1-16_AMi 4 ** 319.0 Weakly correlated
370 ERV3-16A3_LTR 4 n.s 99.0 Weakly correlated
371 HERVIP10B3-int 4 n.s 28.9 Weakly correlated
372 HERVK11-int 4 n.s 28.9 Weakly correlated
373 HERVP71A-int 4 n.s 43.0 Highly correlated
374 L1M6B 4 * 99.0 Weakly correlated
375 L1M8 4 n.s 99.0 Weakly correlated
376 L1MEj 4 n.s 99.0 Weakly correlated
377 L1PA12 4 n.s 74.0 Weakly correlated
378 L1PBb 4 n.s 74.0 Weakly correlated
379 LTR103_Mam 4 * 99.0 Weakly correlated
380 LTR10F 4 n.s 28.9 Weakly correlated
381 LTR16 4 n.s 99.0 Weakly correlated
382 LTR16B 4 n.s 99.0 Weakly correlated
383 LTR16E2 4 n.s 99.0 Weakly correlated
384 LTR19A 4 n.s 43.0 Highly correlated
385 LTR19B 4 * 43.0 Highly correlated
386 LTR24B 4 * 74.0 Weakly correlated
387 LTR25 4 * 43.0 Highly correlated
388 LTR25-int 4 n.s 43.0 Highly correlated
389 LTR35A 4 **** 43.0 Highly correlated
390 LTR40a 4 n.s 99.0 Weakly correlated
391 LTR40c 4 n.s 99.0 Weakly correlated
392 LTR55 4 * 99.0 Weakly correlated
393 LTR62 4 * 74.0 Weakly correlated
394 LTR81B 4 n.s 99.0 Weakly correlated
395 LTR91 4 *** 99.0 Weakly correlated
396 LTR9B 4 n.s 43.0 Highly correlated
397 LTR9D 4 n.s 43.0 Highly correlated
398 MER101 4 * 74.0 Weakly correlated
399 MER11A 4 n.s 28.9 Weakly correlated
400 MER34-int 4 n.s 99.0 Weakly correlated
401 MER34A 4 n.s 99.0 Weakly correlated
402 MER34A1 4 n.s 99.0 Weakly correlated
403 MER34C2 4 n.s 74.0 Weakly correlated
404 MER51A 4 n.s 43.0 Highly correlated
405 MER51B 4 n.s 43.0 Highly correlated
406 MER52A 4 n.s 74.0 Weakly correlated
407 MER57A-int 4 n.s 43.0 Highly correlated
408 MER57C2 4 * 87.0 Weakly correlated
409 MER61-int 4 n.s 43.0 Highly correlated
410 MER67A 4 * 99.0 Weakly correlated
411 MER68-int 4 * 99.0 Weakly correlated
412 MER76 4 n.s 99.0 Weakly correlated
413 MER83 4 n.s 43.0 Highly correlated
414 MER83B-int 4 * 99.0 Weakly correlated
415 MER90a 4 n.s 99.0 Weakly correlated
416 MLT1J1-int 4 n.s 99.0 Weakly correlated
417 MLT2C2 4 n.s 99.0 Weakly correlated
418 PABL_B 4 * 43.0 Highly correlated
419 PABL_B-int 4 n.s 74.0 Weakly correlated
420 PRIMA4-int 4 n.s 74.0 Weakly correlated
421 PrimLTR79 4 **** 74.0 Weakly correlated
422 SVA_C 4 n.s 15.2 Weakly correlated
423 AluYi6 3 * 15.2 Weakly correlated
424 AluYk11 3 * 15.2 Weakly correlated
425 HERV3-int 3 n.s 28.9 Weakly correlated
426 HERVKC4-int 3 * 28.9 Weakly correlated
427 HERVL-int 3 n.s 74.0 Weakly correlated
428 L1M3c 3 n.s 99.0 Weakly correlated
429 LOR1a 3 n.s 74.0 Weakly correlated
430 LOR1b 3 n.s 74.0 Weakly correlated
431 LTR06 3 *** 74.0 Weakly correlated
432 LTR105_Mam 3 n.s 99.0 Weakly correlated
433 LTR10C 3 n.s 28.9 Weakly correlated
434 LTR15 3 n.s 28.9 Weakly correlated
435 LTR16B1 3 n.s 99.0 Weakly correlated
436 LTR19C 3 ** 43.0 Highly correlated
437 LTR22B 3 * 28.9 Weakly correlated
438 LTR23 3 n.s 74.0 Weakly correlated
439 LTR26 3 n.s 74.0 Weakly correlated
440 LTR29 3 n.s 43.0 Highly correlated
441 LTR33B 3 n.s 99.0 Weakly correlated
442 LTR39 3 n.s 43.0 Highly correlated
443 LTR46 3 * 43.0 Highly correlated
444 LTR47A2 3 * 74.0 Weakly correlated
445 LTR49 3 n.s 74.0 Weakly correlated
446 LTR51 3 n.s 74.0 Weakly correlated
447 LTR52 3 n.s 99.0 Weakly correlated
448 LTR5B 3 n.s 28.9 Weakly correlated
449 LTR64 3 n.s 74.0 Weakly correlated
450 LTR6A 3 n.s 28.9 Weakly correlated
451 LTR71A 3 ** 43.0 Highly correlated
452 LTR72 3 ** 74.0 Weakly correlated
453 LTR75 3 * 99.0 Weakly correlated
454 LTR76 3 * 74.0 Weakly correlated
455 LTR7B 3 n.s 28.9 Weakly correlated
456 LTR81 3 * 99.0 Weakly correlated
457 LTR81A 3 n.s 99.0 Weakly correlated
458 LTR90A 3 ** 99.0 Weakly correlated
459 MER34B-int 3 n.s 99.0 Weakly correlated
460 MER34C_ 3 n.s 87.0 Weakly correlated
461 MER41C 3 n.s 74.0 Weakly correlated
462 MER4E 3 n.s 74.0 Weakly correlated
463 MER52C 3 n.s 74.0 Weakly correlated
464 MER54B 3 n.s 87.0 Weakly correlated
465 MER57D 3 n.s 87.0 Weakly correlated
466 MER61C 3 * 43.0 Highly correlated
467 MER61D 3 * 43.0 Highly correlated
468 MER67D 3 n.s 99.0 Weakly correlated
469 MER84-int 3 * 74.0 Weakly correlated
470 MLT1H-int 3 n.s 99.0 Weakly correlated
471 MLT2A2 3 n.s 74.0 Weakly correlated
472 MamGypLTR1a 3 n.s 99.0 Weakly correlated
473 MamGypLTR1d 3 n.s 99.0 Weakly correlated
474 MamGypLTR2b 3 n.s 99.0 Weakly correlated
475 AluYg6 2 n.s 15.2 Weakly correlated
476 AluYh3a3 2 n.s 15.2 Weakly correlated
477 AluYh9 2 *** 15.2 Weakly correlated
478 AluYk12 2 * 15.2 Weakly correlated
479 CR1-L3A_Croc 2 * 319.0 Weakly correlated
480 ERVL-int 2 n.s 99.0 Weakly correlated
481 ERVL47-int 2 n.s 74.0 Weakly correlated
482 HERV16-int 2 n.s 99.0 Weakly correlated
483 HERV35I-int 2 n.s 43.0 Highly correlated
484 HERVE_a-int 2 n.s 28.9 Weakly correlated
485 Harlequin-int 2 n.s 74.0 Weakly correlated
486 L1MEa 2 n.s 99.0 Weakly correlated
487 LTR103b_Mam 2 n.s 99.0 Weakly correlated
488 LTR106_Mam 2 n.s 99.0 Weakly correlated
489 LTR108e_Mam 2 * 99.0 Weakly correlated
490 LTR10D 2 n.s 28.9 Weakly correlated
491 LTR12F 2 n.s 28.9 Weakly correlated
492 LTR13A 2 n.s 28.9 Weakly correlated
493 LTR14C 2 n.s 28.9 Weakly correlated
494 LTR16B2 2 n.s 99.0 Weakly correlated
495 LTR17 2 n.s 28.9 Weakly correlated
496 LTR1D 2 n.s 43.0 Highly correlated
497 LTR2 2 n.s 28.9 Weakly correlated
498 LTR24C 2 n.s 74.0 Weakly correlated
499 LTR26D 2 n.s 0.0 Weakly correlated
500 LTR26E 2 * 74.0 Weakly correlated
501 LTR27 2 * 43.0 Highly correlated
502 LTR27E 2 n.s 43.0 Highly correlated
503 LTR33C 2 n.s 99.0 Weakly correlated
504 LTR38 2 n.s 74.0 Weakly correlated
505 LTR38B 2 n.s 74.0 Weakly correlated
506 LTR40b 2 n.s 99.0 Weakly correlated
507 LTR45C 2 n.s 99.0 Weakly correlated
508 LTR47B4 2 * 74.0 Weakly correlated
509 LTR57-int 2 n.s 74.0 Weakly correlated
510 LTR68 2 n.s 99.0 Weakly correlated
511 LTR73 2 n.s 99.0 Weakly correlated
512 LTR75B 2 * 99.0 Weakly correlated
513 LTR85c 2 n.s 99.0 Weakly correlated
514 LTR86A2 2 n.s 99.0 Weakly correlated
515 LTR86B1 2 * 99.0 Weakly correlated
516 LTR89 2 n.s 99.0 Weakly correlated
517 MER34B 2 n.s 87.0 Weakly correlated
518 MER41G 2 * 74.0 Weakly correlated
519 MER4C 2 n.s 74.0 Weakly correlated
520 MER4E1 2 n.s 74.0 Weakly correlated
521 MER54A 2 n.s 87.0 Weakly correlated
522 MER57E1 2 n.s 87.0 Weakly correlated
523 MER57F 2 n.s 74.0 Weakly correlated
524 MER61E 2 n.s 43.0 Highly correlated
525 MER65D 2 n.s 87.0 Weakly correlated
526 MER66-int 2 n.s 43.0 Highly correlated
527 MER66A 2 n.s 43.0 Highly correlated
528 MER68B 2 n.s 99.0 Weakly correlated
529 MER70B 2 n.s 87.0 Weakly correlated
530 MER72 2 n.s 43.0 Highly correlated
531 MER74B 2 n.s 99.0 Weakly correlated
532 MER92-int 2 n.s 99.0 Weakly correlated
533 MER92B 2 n.s 99.0 Weakly correlated
534 MER95 2 * 99.0 Weakly correlated
535 MLT1C-int 2 n.s 94.0 Weakly correlated
536 MLT1E1 2 n.s 99.0 Weakly correlated
537 MLT1G-int 2 n.s 99.0 Weakly correlated
538 MLT1I-int 2 n.s 99.0 Weakly correlated
539 MLT1J2-int 2 n.s 99.0 Weakly correlated
540 MLT2B5 2 n.s 87.0 Weakly correlated
541 MLT2E 2 n.s 99.0 Weakly correlated
542 MSTB-int 2 n.s 43.0 Highly correlated
543 MSTB2 2 n.s 74.0 Weakly correlated
544 MamGyp-int 2 n.s 99.0 Weakly correlated
545 PABL_A 2 n.s 43.0 Highly correlated
546 THE1A-int 2 n.s 43.0 Highly correlated
547 UCON86 2 *** 319.0 Weakly correlated
548 X7B_LINE 2 n.s 319.0 Weakly correlated
549 AluYb9 1 n.s 15.2 Weakly correlated
550 HERV1_LTRd 1 ** 43.0 Highly correlated
551 HERVK11D-int 1 n.s 19.6 Weakly correlated
552 HERVK13-int 1 n.s 19.6 Weakly correlated
553 HERVK14-int 1 n.s 28.9 Weakly correlated
554 HERVK9-int 1 n.s 28.9 Weakly correlated
555 HUERS-P1-int 1 n.s 43.0 Highly correlated
556 L1M 1 n.s 74.0 Weakly correlated
557 L1M3b 1 n.s 99.0 Weakly correlated
558 L1M3d 1 n.s 99.0 Weakly correlated
559 L1M3de 1 n.s 99.0 Weakly correlated
560 L1P4e 1 n.s 74.0 Weakly correlated
561 L1PBa1 1 n.s 74.0 Weakly correlated
562 L2-1_Crp 1 ** 319.0 Weakly correlated
563 LTR1 1 n.s 43.0 Highly correlated
564 LTR102_Mam 1 n.s 99.0 Weakly correlated
565 LTR107_Mam 1 n.s 99.0 Weakly correlated
566 LTR10B 1 n.s 28.9 Weakly correlated
567 LTR10B1 1 n.s 28.9 Weakly correlated
568 LTR12D 1 n.s 19.6 Weakly correlated
569 LTR14 1 n.s 28.9 Weakly correlated
570 LTR16D1 1 n.s 99.0 Weakly correlated
571 LTR16D2 1 n.s 99.0 Weakly correlated
572 LTR1A1 1 n.s 43.0 Highly correlated
573 LTR1D1 1 n.s 43.0 Highly correlated
574 LTR1F 1 n.s 43.0 Highly correlated
575 LTR21A 1 n.s 28.9 Weakly correlated
576 LTR22 1 n.s 28.9 Weakly correlated
577 LTR23-int 1 n.s 74.0 Weakly correlated
578 LTR26C 1 n.s 0.0 Weakly correlated
579 LTR27C 1 n.s 43.0 Highly correlated
580 LTR28B 1 n.s 43.0 Highly correlated
581 LTR2B 1 n.s 19.6 Weakly correlated
582 LTR2C 1 n.s 19.6 Weakly correlated
583 LTR30 1 n.s 28.9 Weakly correlated
584 LTR32 1 n.s 43.0 Highly correlated
585 LTR34 1 n.s 74.0 Weakly correlated
586 LTR36 1 n.s 74.0 Weakly correlated
587 LTR3B_ 1 n.s 28.9 Weakly correlated
588 LTR4 1 n.s 28.9 Weakly correlated
589 LTR40A1 1 n.s 99.0 Weakly correlated
590 LTR42 1 n.s 74.0 Weakly correlated
591 LTR43B 1 n.s 74.0 Weakly correlated
592 LTR45 1 n.s 99.0 Weakly correlated
593 LTR46-int 1 n.s 74.0 Weakly correlated
594 LTR47B3 1 n.s 74.0 Weakly correlated
595 LTR48B 1 n.s 74.0 Weakly correlated
596 LTR5 1 ** 19.6 Weakly correlated
597 LTR53-int 1 n.s 99.0 Weakly correlated
598 LTR57 1 n.s 74.0 Weakly correlated
599 LTR5A 1 n.s 19.6 Weakly correlated
600 LTR61 1 n.s 43.0 Highly correlated
601 LTR66 1 n.s 43.0 Highly correlated
602 LTR6B 1 n.s 19.6 Weakly correlated
603 LTR72B 1 n.s 74.0 Weakly correlated
604 LTR75_1 1 n.s 99.0 Weakly correlated
605 LTR7C 1 n.s 28.9 Weakly correlated
606 LTR80A 1 n.s 99.0 Weakly correlated
607 LTR81AB 1 n.s 99.0 Weakly correlated
608 LTR81C 1 n.s 99.0 Weakly correlated
609 LTR86A1 1 n.s 99.0 Weakly correlated
610 LTR86C 1 n.s 99.0 Weakly correlated
611 LTR87 1 n.s 99.0 Weakly correlated
612 LTR90B 1 n.s 99.0 Weakly correlated
613 LTR9C 1 n.s 43.0 Highly correlated
614 MER11B 1 n.s 19.6 Weakly correlated
615 MER11C 1 n.s 19.6 Weakly correlated
616 MER11D 1 n.s 19.6 Weakly correlated
617 MER31-int 1 n.s 99.0 Weakly correlated
618 MER41-int 1 n.s 74.0 Weakly correlated
619 MER41E 1 n.s 74.0 Weakly correlated
620 MER50B 1 n.s 43.0 Highly correlated
621 MER51C 1 n.s 43.0 Highly correlated
622 MER51D 1 n.s 43.0 Highly correlated
623 MER57C1 1 n.s 74.0 Weakly correlated
624 MER61A 1 n.s 43.0 Highly correlated
625 MER61B 1 n.s 43.0 Highly correlated
626 MER65B 1 n.s 74.0 Weakly correlated
627 MER70-int 1 n.s 99.0 Weakly correlated
628 MER70A 1 n.s 87.0 Weakly correlated
629 MER70C 1 n.s 99.0 Weakly correlated
630 MER72B 1 n.s 43.0 Highly correlated
631 MER76-int 1 n.s 99.0 Weakly correlated
632 MER83B 1 n.s 43.0 Highly correlated
633 MER84 1 n.s 43.0 Highly correlated
634 MER88 1 n.s 99.0 Weakly correlated
635 MER89-int 1 n.s 99.0 Weakly correlated
636 MER92C 1 n.s 99.0 Weakly correlated
637 MER9a1 1 n.s 19.6 Weakly correlated
638 MLT1A0-int 1 n.s 99.0 Weakly correlated
639 MLT1D-int 1 n.s 99.0 Weakly correlated
640 MLT1E 1 n.s 99.0 Weakly correlated
641 MLT1F-int 1 n.s 99.0 Weakly correlated
642 MLT1F1-int 1 n.s 99.0 Weakly correlated
643 MLT1G3-int 1 n.s 99.0 Weakly correlated
644 MLT1K-int 1 n.s 99.0 Weakly correlated
645 MLT2A1 1 n.s 74.0 Weakly correlated
646 MSTA-int 1 n.s 43.0 Highly correlated
647 MSTA1 1 n.s 74.0 Weakly correlated
648 MSTC-int 1 n.s 74.0 Weakly correlated
649 MSTD-int 1 n.s 74.0 Weakly correlated
650 MamGypLTR1c 1 n.s 99.0 Weakly correlated
651 PRIMAX-int 1 * 74.0 Weakly correlated
652 THE1A 1 n.s 43.0 Highly correlated
653 THE1D-int 1 n.s 28.9 Weakly correlated
654 UCON51 1 ** 319.0 Weakly correlated
655 X7C_LINE 1 n.s 319.0 Weakly correlated
656 X9_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluSx1 672 **** 74.0 Weakly correlated
2 AluSx 612 **** 74.0 Weakly correlated
3 AluY 612 **** 74.0 Weakly correlated
4 AluJb 539 **** 74.0 Weakly correlated
5 AluSz 513 **** 74.0 Weakly correlated
6 AluJo 346 **** 74.0 Weakly correlated
7 AluJr 324 **** 74.0 Weakly correlated
8 AluSq2 317 **** 74.0 Weakly correlated
9 AluSp 286 **** 74.0 Weakly correlated
10 L2a 269 n.s 99.0 Weakly correlated
11 AluSz6 216 **** 74.0 Weakly correlated
12 AluSg 207 **** 74.0 Weakly correlated
13 AluSc 184 **** 74.0 Weakly correlated
14 AluSx3 171 **** 74.0 Weakly correlated
15 MIR 144 n.s 99.0 Weakly correlated
16 MIRb 140 n.s 99.0 Weakly correlated
17 L2c 135 n.s 99.0 Weakly correlated
18 L2b 108 n.s 99.0 Weakly correlated
19 AluSc8 99 * 74.0 Weakly correlated
20 AluSq 90 ** 74.0 Weakly correlated
21 L1M5 84 n.s 99.0 Weakly correlated
22 FLAM_C 67 **** 74.0 Weakly correlated
23 AluSx4 66 **** 74.0 Weakly correlated
24 MIRc 64 n.s 99.0 Weakly correlated
25 L1MC4 62 n.s 99.0 Weakly correlated
26 L2 53 n.s 99.0 Weakly correlated
27 L1ME4a 52 n.s 99.0 Weakly correlated
28 L1MEc 44 n.s 99.0 Weakly correlated
29 AluSg7 42 * 74.0 Weakly correlated
30 L1MC5a 42 n.s 99.0 Weakly correlated
31 L1ME1 42 n.s 99.0 Weakly correlated
32 AluJr4 37 n.s 74.0 Weakly correlated
33 L1MB3 37 n.s 99.0 Weakly correlated
34 L1MB7 37 n.s 99.0 Weakly correlated
35 MIR3 37 n.s 99.0 Weakly correlated
36 AluSg4 35 * 74.0 Weakly correlated
37 L1PB1 35 n.s 74.0 Weakly correlated
38 L1ME3G 34 n.s 99.0 Weakly correlated
39 L1ME4b 34 n.s 99.0 Weakly correlated
40 L1MB8 33 n.s 99.0 Weakly correlated
41 AluSc5 32 * 74.0 Weakly correlated
42 L1MA9 32 n.s 99.0 Weakly correlated
43 L1MEd 31 n.s 99.0 Weakly correlated
44 L3 31 n.s 99.0 Weakly correlated
45 AluYc 30 **** 74.0 Weakly correlated
46 HAL1 30 n.s 99.0 Weakly correlated
47 L1MC5 30 n.s 99.0 Weakly correlated
48 L1ME3Cz 30 n.s 99.0 Weakly correlated
49 FLAM_A 29 * 74.0 Weakly correlated
50 L1M4 29 n.s 99.0 Weakly correlated
51 AluYm1 28 ** 19.6 Weakly correlated
52 L1MB2 28 n.s 99.0 Weakly correlated
53 AluYj4 27 **** 0.0 Weakly correlated
54 SVA_D 26 n.s 15.2 Weakly correlated
55 L1PA5 24 n.s 19.6 Weakly correlated
56 AluYh3 23 **** 15.2 Weakly correlated
57 L1MEf 23 n.s 99.0 Weakly correlated
58 L1MEg 23 n.s 99.0 Weakly correlated
59 L1MA4 22 n.s 87.0 Weakly correlated
60 L1M1 21 n.s 74.0 Weakly correlated
61 L1PA16 21 n.s 74.0 Weakly correlated
62 L1ME3B 19 n.s 99.0 Weakly correlated
63 MLT1B 19 n.s 99.0 Weakly correlated
64 FRAM 18 n.s 74.0 Weakly correlated
65 L1M2 18 n.s 99.0 Weakly correlated
66 L1MC3 18 n.s 99.0 Weakly correlated
67 L1ME2 18 n.s 99.0 Weakly correlated
68 Alu 17 **** 74.0 Weakly correlated
69 L1MB5 17 n.s 99.0 Weakly correlated
70 L1MC 17 n.s 99.0 Weakly correlated
71 L1MC4a 17 n.s 99.0 Weakly correlated
72 L1ME3A 17 n.s 99.0 Weakly correlated
73 L1MA3 16 n.s 74.0 Weakly correlated
74 L1PA3 16 n.s 19.6 Weakly correlated
75 L1MC1 15 n.s 99.0 Weakly correlated
76 L1ME3 15 n.s 99.0 Weakly correlated
77 L1MA2 14 n.s 74.0 Weakly correlated
78 L1MA7 14 n.s 87.0 Weakly correlated
79 L1MA8 14 n.s 87.0 Weakly correlated
80 L1MD2 14 n.s 99.0 Weakly correlated
81 L1PA13 14 n.s 74.0 Weakly correlated
82 L1MCa 13 n.s 99.0 Weakly correlated
83 L1MD 13 n.s 99.0 Weakly correlated
84 L1ME2z 13 n.s 99.0 Weakly correlated
85 L1ME4c 13 n.s 99.0 Weakly correlated
86 HAL1ME 12 n.s 99.0 Weakly correlated
87 L1MB4 12 n.s 99.0 Weakly correlated
88 L1PA15 12 n.s 74.0 Weakly correlated
89 L1PA6 12 n.s 28.9 Weakly correlated
90 LTR13 12 ** 19.6 Weakly correlated
91 MLT1K 12 n.s 99.0 Weakly correlated
92 AluSq4 11 * 74.0 Weakly correlated
93 L1MC2 11 n.s 99.0 Weakly correlated
94 L4_A_Mam 11 n.s 99.0 Weakly correlated
95 MER39 11 n.s 74.0 Weakly correlated
96 AluYf1 10 n.s 19.6 Weakly correlated
97 L1MA5 10 n.s 87.0 Weakly correlated
98 AluYa5 9 n.s 15.2 Weakly correlated
99 L1MA4A 9 n.s 87.0 Weakly correlated
100 L1MD3 9 n.s 99.0 Weakly correlated
101 L1ME3F 9 n.s 99.0 Weakly correlated
102 L1ME5 9 n.s 99.0 Weakly correlated
103 L1PA8 9 n.s 74.0 Weakly correlated
104 MIR1_Amn 9 n.s 319.0 Weakly correlated
105 MLT1L 9 n.s 99.0 Weakly correlated
106 ERV3-16A3_I-int 8 n.s 99.0 Weakly correlated
107 L1M3 8 n.s 99.0 Weakly correlated
108 L1MA6 8 n.s 87.0 Weakly correlated
109 L1MB1 8 n.s 99.0 Weakly correlated
110 L1MEi 8 n.s 99.0 Weakly correlated
111 L1PA10 8 n.s 74.0 Weakly correlated
112 L1PA4 8 n.s 19.6 Weakly correlated
113 L1PA7 8 n.s 74.0 Weakly correlated
114 L1PB 8 n.s 74.0 Weakly correlated
115 L1PB4 8 n.s 99.0 Weakly correlated
116 MER34 8 * 87.0 Weakly correlated
117 AluYe5 7 n.s 74.0 Weakly correlated
118 L1M4a1 7 n.s 99.0 Weakly correlated
119 L1MD1 7 n.s 99.0 Weakly correlated
120 L1P4 7 n.s 74.0 Weakly correlated
121 L1PA17 7 n.s 74.0 Weakly correlated
122 L1PA2 7 n.s 15.2 Weakly correlated
123 L4_C_Mam 7 n.s 99.0 Weakly correlated
124 LTR49-int 7 n.s 74.0 Weakly correlated
125 MER4-int 7 n.s 74.0 Weakly correlated
126 MLT1D 7 n.s 99.0 Weakly correlated
127 MLT1H 7 n.s 99.0 Weakly correlated
128 MLT1J 7 n.s 99.0 Weakly correlated
129 MSTA 7 n.s 43.0 Highly correlated
130 AluYb8 6 n.s 15.2 Weakly correlated
131 ERVL-B4-int 6 n.s 99.0 Weakly correlated
132 FAM 6 n.s 87.0 Weakly correlated
133 L1M4c 6 n.s 99.0 Weakly correlated
134 L1MA1 6 n.s 74.0 Weakly correlated
135 L1MCb 6 n.s 99.0 Weakly correlated
136 L1MDa 6 n.s 99.0 Weakly correlated
137 L1ME3D 6 n.s 99.0 Weakly correlated
138 L1ME3E 6 n.s 99.0 Weakly correlated
139 L1PA15-16 6 n.s 74.0 Weakly correlated
140 L1PB3 6 n.s 74.0 Weakly correlated
141 L3b 6 n.s 99.0 Weakly correlated
142 MER4A 6 n.s 74.0 Weakly correlated
143 MLT1C 6 n.s 94.0 Weakly correlated
144 SVA_E 6 n.s 0.0 Weakly correlated
145 L1M6 5 n.s 99.0 Weakly correlated
146 L1MA5A 5 n.s 87.0 Weakly correlated
147 L1MEb 5 n.s 99.0 Weakly correlated
148 L1MEh 5 n.s 99.0 Weakly correlated
149 L1P3 5 n.s 74.0 Weakly correlated
150 L1PA11 5 n.s 74.0 Weakly correlated
151 L1PREC2 5 n.s 43.0 Highly correlated
152 MER21C 5 n.s 99.0 Weakly correlated
153 MLT1A0 5 n.s 99.0 Weakly correlated
154 MLT1F 5 n.s 99.0 Weakly correlated
155 THE1B 5 n.s 43.0 Highly correlated
156 AluSq10 4 n.s 74.0 Weakly correlated
157 ERVL-E-int 4 n.s 99.0 Weakly correlated
158 HERVK-int 4 n.s 28.9 Weakly correlated
159 L1M7 4 n.s 99.0 Weakly correlated
160 L1MA10 4 n.s 99.0 Weakly correlated
161 L1MCc 4 n.s 99.0 Weakly correlated
162 L1ME3C 4 n.s 99.0 Weakly correlated
163 L1PA14 4 n.s 74.0 Weakly correlated
164 L1PBb 4 n.s 74.0 Weakly correlated
165 LTR10E 4 * 28.9 Weakly correlated
166 LTR37A 4 n.s 99.0 Weakly correlated
167 LTR50 4 n.s 99.0 Weakly correlated
168 LTR8 4 n.s 43.0 Highly correlated
169 MER41B 4 n.s 74.0 Weakly correlated
170 MER50 4 n.s 43.0 Highly correlated
171 MER51-int 4 n.s 43.0 Highly correlated
172 MER51A 4 n.s 43.0 Highly correlated
173 MER89 4 n.s 99.0 Weakly correlated
174 MLT1A 4 n.s 99.0 Weakly correlated
175 MLT1E3 4 n.s 99.0 Weakly correlated
176 MLT1F1 4 n.s 99.0 Weakly correlated
177 MLT1F2 4 n.s 99.0 Weakly correlated
178 MLT2B4 4 n.s 99.0 Weakly correlated
179 MSTB 4 n.s 43.0 Highly correlated
180 MSTB1 4 n.s 74.0 Weakly correlated
181 MamGypsy2-I 4 n.s 99.0 Weakly correlated
182 MamSINE1 4 n.s 99.0 Weakly correlated
183 THE1D 4 n.s 43.0 Highly correlated
184 AluYi6 3 * 15.2 Weakly correlated
185 AluYk2 3 n.s 19.6 Weakly correlated
186 AluYk3 3 n.s 19.6 Weakly correlated
187 AluYk4 3 n.s 15.2 Weakly correlated
188 ERV24_Prim-int 3 n.s 74.0 Weakly correlated
189 HAL1M8 3 n.s 99.0 Weakly correlated
190 HERV4_I-int 3 n.s 43.0 Highly correlated
191 HERVK22-int 3 n.s 43.0 Highly correlated
192 HERVL40-int 3 n.s 99.0 Weakly correlated
193 L1M4b 3 n.s 99.0 Weakly correlated
194 L1MEg2 3 n.s 99.0 Weakly correlated
195 L1P1 3 n.s 19.6 Weakly correlated
196 L1P4a 3 n.s 74.0 Weakly correlated
197 L1PB2 3 n.s 74.0 Weakly correlated
198 L1PBa 3 n.s 74.0 Weakly correlated
199 LOR1-int 3 n.s 74.0 Weakly correlated
200 LTR10C 3 n.s 28.9 Weakly correlated
201 LTR12C 3 n.s 19.6 Weakly correlated
202 LTR16C 3 n.s 99.0 Weakly correlated
203 LTR33 3 n.s 99.0 Weakly correlated
204 LTR37-int 3 n.s 99.0 Weakly correlated
205 LTR37B 3 n.s 99.0 Weakly correlated
206 LTR41B 3 n.s 99.0 Weakly correlated
207 LTR54 3 n.s 74.0 Weakly correlated
208 MER101-int 3 n.s 74.0 Weakly correlated
209 MER21-int 3 n.s 99.0 Weakly correlated
210 MER34D 3 * 74.0 Weakly correlated
211 MER41A 3 n.s 74.0 Weakly correlated
212 MER4B-int 3 n.s 99.0 Weakly correlated
213 MER51E 3 * 43.0 Highly correlated
214 MER57-int 3 n.s 87.0 Weakly correlated
215 MER57A-int 3 n.s 43.0 Highly correlated
216 MER65-int 3 n.s 87.0 Weakly correlated
217 MER76 3 n.s 99.0 Weakly correlated
218 MLT1H2 3 n.s 99.0 Weakly correlated
219 MLT1I 3 n.s 99.0 Weakly correlated
220 MLT2C1 3 n.s 99.0 Weakly correlated
221 MLT2D 3 n.s 99.0 Weakly correlated
222 MSTD 3 n.s 74.0 Weakly correlated
223 MamRep605 3 n.s 99.0 Weakly correlated
224 SVA_A 3 n.s 19.6 Weakly correlated
225 MLT2F 3 n.s 99.0 Weakly correlated
226 HERVIP10B3-int 3 n.s 28.9 Weakly correlated
227 MLT1J1 3 n.s 99.0 Weakly correlated
228 AluYc3 2 n.s 74.0 Weakly correlated
229 AluYg6 2 n.s 15.2 Weakly correlated
230 ERV24B_Prim-int 2 n.s 74.0 Weakly correlated
231 HAL1b 2 n.s 99.0 Weakly correlated
232 L1M3e 2 n.s 99.0 Weakly correlated
233 L1M3f 2 n.s 87.0 Weakly correlated
234 L1M8 2 n.s 99.0 Weakly correlated
235 LTR101_Mam 2 n.s 99.0 Weakly correlated
236 LTR13_ 2 * 28.9 Weakly correlated
237 LTR33A 2 n.s 99.0 Weakly correlated
238 LTR39 2 n.s 43.0 Highly correlated
239 LTR41 2 n.s 99.0 Weakly correlated
240 LTR43 2 n.s 74.0 Weakly correlated
241 LTR44 2 n.s 74.0 Weakly correlated
242 LTR52 2 n.s 99.0 Weakly correlated
243 LTR54B 2 n.s 74.0 Weakly correlated
244 LTR56 2 n.s 74.0 Weakly correlated
245 LTR64 2 n.s 74.0 Weakly correlated
246 LTR7 2 n.s 19.6 Weakly correlated
247 LTR78 2 n.s 99.0 Weakly correlated
248 LTR78B 2 n.s 99.0 Weakly correlated
249 LTR81A 2 n.s 99.0 Weakly correlated
250 LTR82A 2 n.s 99.0 Weakly correlated
251 LTR82B 2 n.s 99.0 Weakly correlated
252 MER101 2 n.s 74.0 Weakly correlated
253 MER34C_ 2 n.s 87.0 Weakly correlated
254 MER41D 2 n.s 74.0 Weakly correlated
255 MER4CL34 2 n.s 43.0 Highly correlated
256 MER4D 2 n.s 74.0 Weakly correlated
257 MER61-int 2 n.s 43.0 Highly correlated
258 MER66B 2 n.s 43.0 Highly correlated
259 MER74A 2 n.s 99.0 Weakly correlated
260 MER77 2 n.s 99.0 Weakly correlated
261 MER83B-int 2 n.s 99.0 Weakly correlated
262 MLT1E1A 2 n.s 99.0 Weakly correlated
263 MLT1E2 2 n.s 99.0 Weakly correlated
264 MLT1G1 2 n.s 99.0 Weakly correlated
265 MLT1G3 2 n.s 99.0 Weakly correlated
266 MLT1H1 2 n.s 99.0 Weakly correlated
267 MLT1J2 2 n.s 99.0 Weakly correlated
268 MLT1J2-int 2 n.s 99.0 Weakly correlated
269 MLT1N2 2 n.s 99.0 Weakly correlated
270 MLT2A2 2 n.s 74.0 Weakly correlated
271 MLT2B1 2 n.s 99.0 Weakly correlated
272 MLT2C2 2 n.s 99.0 Weakly correlated
273 MamGypLTR3 2 n.s 99.0 Weakly correlated
274 MamRep1151 2 n.s 99.0 Weakly correlated
275 PABL_B-int 2 n.s 74.0 Weakly correlated
276 Plat_L3 2 n.s 99.0 Weakly correlated
277 SVA_B 2 n.s 15.2 Weakly correlated
278 SVA_C 2 n.s 15.2 Weakly correlated
279 SVA_F 2 n.s 0.0 Weakly correlated
280 THE1A-int 2 n.s 43.0 Highly correlated
281 HERVFH19-int 2 n.s 43.0 Highly correlated
282 MER51B 2 n.s 43.0 Highly correlated
283 LTR72 2 * 74.0 Weakly correlated
284 MER39B 2 n.s 74.0 Weakly correlated
285 MER65C 2 n.s 74.0 Weakly correlated
286 AluYa8 1 n.s 15.2 Weakly correlated
287 AluYk12 1 n.s 15.2 Weakly correlated
288 CR1-3_Croc 1 n.s 319.0 Weakly correlated
289 CR1_Mam 1 n.s 99.0 Weakly correlated
290 HERV1_LTRd 1 ** 43.0 Highly correlated
291 HERVI-int 1 n.s 28.9 Weakly correlated
292 HERVIP10F-int 1 n.s 28.9 Weakly correlated
293 HERVIP10FH-int 1 n.s 28.9 Weakly correlated
294 HERVKC4-int 1 n.s 28.9 Weakly correlated
295 HUERS-P1-int 1 n.s 43.0 Highly correlated
296 HUERS-P3-int 1 n.s 43.0 Highly correlated
297 L1M3b 1 n.s 99.0 Weakly correlated
298 L1M3d 1 n.s 99.0 Weakly correlated
299 L1M4a2 1 n.s 99.0 Weakly correlated
300 L1M6B 1 n.s 99.0 Weakly correlated
301 L1MDb 1 n.s 99.0 Weakly correlated
302 L1MEa 1 n.s 99.0 Weakly correlated
303 L1MEj 1 n.s 99.0 Weakly correlated
304 L1PA8A 1 n.s 74.0 Weakly correlated
305 L1PBa1 1 n.s 74.0 Weakly correlated
306 L4_B_Mam 1 n.s 99.0 Weakly correlated
307 LTR06 1 * 74.0 Weakly correlated
308 LTR102_Mam 1 n.s 99.0 Weakly correlated
309 LTR15 1 n.s 28.9 Weakly correlated
310 LTR16A 1 n.s 99.0 Weakly correlated
311 LTR19A 1 n.s 43.0 Highly correlated
312 LTR23 1 n.s 74.0 Weakly correlated
313 LTR24C 1 n.s 74.0 Weakly correlated
314 LTR27E 1 n.s 43.0 Highly correlated
315 LTR29 1 n.s 43.0 Highly correlated
316 LTR2B 1 n.s 19.6 Weakly correlated
317 LTR30 1 n.s 28.9 Weakly correlated
318 LTR33A_ 1 n.s 99.0 Weakly correlated
319 LTR38B 1 n.s 74.0 Weakly correlated
320 LTR40a 1 n.s 99.0 Weakly correlated
321 LTR41C 1 n.s 99.0 Weakly correlated
322 LTR42 1 n.s 74.0 Weakly correlated
323 LTR43-int 1 n.s 74.0 Weakly correlated
324 LTR45C 1 n.s 99.0 Weakly correlated
325 LTR48 1 n.s 74.0 Weakly correlated
326 LTR5 1 ** 19.6 Weakly correlated
327 LTR51 1 n.s 74.0 Weakly correlated
328 LTR57-int 1 n.s 74.0 Weakly correlated
329 LTR5_Hs 1 n.s 0.0 Weakly correlated
330 LTR61 1 n.s 43.0 Highly correlated
331 LTR62 1 n.s 74.0 Weakly correlated
332 LTR71B 1 n.s 43.0 Highly correlated
333 LTR76 1 n.s 74.0 Weakly correlated
334 LTR79 1 n.s 99.0 Weakly correlated
335 LTR88c 1 n.s 99.0 Weakly correlated
336 LTR8B 1 n.s 43.0 Highly correlated
337 MER110 1 n.s 99.0 Weakly correlated
338 MER21A 1 n.s 74.0 Weakly correlated
339 MER21B 1 n.s 99.0 Weakly correlated
340 MER34-int 1 n.s 99.0 Weakly correlated
341 MER34A 1 n.s 99.0 Weakly correlated
342 MER34A1 1 n.s 99.0 Weakly correlated
343 MER34B 1 n.s 87.0 Weakly correlated
344 MER34B-int 1 n.s 99.0 Weakly correlated
345 MER34C2 1 n.s 74.0 Weakly correlated
346 MER41-int 1 n.s 74.0 Weakly correlated
347 MER41G 1 n.s 74.0 Weakly correlated
348 MER49 1 n.s 43.0 Highly correlated
349 MER4C 1 n.s 74.0 Weakly correlated
350 MER4D1 1 n.s 74.0 Weakly correlated
351 MER4E1 1 n.s 74.0 Weakly correlated
352 MER50-int 1 n.s 43.0 Highly correlated
353 MER51D 1 n.s 43.0 Highly correlated
354 MER52-int 1 n.s 99.0 Weakly correlated
355 MER57A1 1 n.s 43.0 Highly correlated
356 MER57C2 1 n.s 87.0 Weakly correlated
357 MER57E3 1 n.s 74.0 Weakly correlated
358 MER65B 1 n.s 74.0 Weakly correlated
359 MER66C 1 n.s 43.0 Highly correlated
360 MER67C 1 n.s 99.0 Weakly correlated
361 MER77B 1 n.s 99.0 Weakly correlated
362 MER83B 1 n.s 43.0 Highly correlated
363 MER84-int 1 n.s 74.0 Weakly correlated
364 MER90a 1 n.s 99.0 Weakly correlated
365 MER92-int 1 n.s 99.0 Weakly correlated
366 MLT1A0-int 1 n.s 99.0 Weakly correlated
367 MLT1A1 1 n.s 87.0 Weakly correlated
368 MLT1E 1 n.s 99.0 Weakly correlated
369 MLT1F-int 1 n.s 99.0 Weakly correlated
370 MLT1H-int 1 n.s 99.0 Weakly correlated
371 MLT1J1-int 1 n.s 99.0 Weakly correlated
372 MLT1O 1 n.s 99.0 Weakly correlated
373 MLT2B5 1 n.s 87.0 Weakly correlated
374 MSTC 1 n.s 74.0 Weakly correlated
375 MamGypLTR1a 1 n.s 99.0 Weakly correlated
376 MamGypLTR3a 1 n.s 99.0 Weakly correlated
377 MamRTE1 1 n.s 99.0 Weakly correlated
378 PABL_A 1 n.s 43.0 Highly correlated
379 PRIMA4-int 1 n.s 74.0 Weakly correlated
380 Penelope1_Vert 1 n.s 319.0 Weakly correlated
381 THE1B-int 1 n.s 43.0 Highly correlated
382 THE1C 1 n.s 43.0 Highly correlated
383 X7A_LINE 1 n.s 319.0 Weakly correlated
384 LTR14C 1 n.s 28.9 Weakly correlated
385 LTR3B_ 1 n.s 28.9 Weakly correlated
386 LTR9B 1 n.s 43.0 Highly correlated
387 LTR9D 1 n.s 43.0 Highly correlated
388 MER68-int 1 n.s 99.0 Weakly correlated
389 MER92B 1 n.s 99.0 Weakly correlated
390 LTR81B 1 n.s 99.0 Weakly correlated
391 MER4A1 1 n.s 74.0 Weakly correlated
392 MLT1I-int 1 n.s 99.0 Weakly correlated
393 Mam_R4 1 n.s 99.0 Weakly correlated
394 LTR21A 1 n.s 28.9 Weakly correlated
395 LTR83 1 n.s 99.0 Weakly correlated
396 PRIMA41-int 1 n.s 74.0 Weakly correlated
397 HERVK11D-int 1 n.s 19.6 Weakly correlated
398 HERVP71A-int 1 n.s 43.0 Highly correlated
399 L1M 1 n.s 74.0 Weakly correlated
400 LTR10D 1 n.s 28.9 Weakly correlated
401 LTR22B 1 n.s 28.9 Weakly correlated
402 LTR45B 1 n.s 74.0 Weakly correlated
403 LTR81AB 1 n.s 99.0 Weakly correlated
404 MER57B1 1 n.s 43.0 Highly correlated
405 PrimLTR79 1 n.s 74.0 Weakly correlated
406 HUERS-P3b-int 1 n.s 43.0 Highly correlated
407 L1HS 1 n.s 8.6 Weakly correlated
408 L5 1 n.s 99.0 Weakly correlated
409 LTR104_Mam 1 n.s 99.0 Weakly correlated
410 LTR26 1 n.s 74.0 Weakly correlated
411 LTR57 1 n.s 74.0 Weakly correlated
412 MER61C 1 n.s 43.0 Highly correlated
413 MER66-int 1 n.s 43.0 Highly correlated
414 MLT1E1 1 n.s 99.0 Weakly correlated
415 MLT1G 1 n.s 99.0 Weakly correlated
416 HERVK13-int 1 n.s 19.6 Weakly correlated
417 HERVK9-int 1 n.s 28.9 Weakly correlated
418 LTR22 1 n.s 28.9 Weakly correlated
419 LTR65 1 n.s 99.0 Weakly correlated
420 LTR13A 1 n.s 28.9 Weakly correlated
421 LTR6A 1 n.s 28.9 Weakly correlated
422 MER65D 1 n.s 87.0 Weakly correlated
423 MSTB-int 1 n.s 43.0 Highly correlated
424 X2_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 L1M4A1 99.0 Weakly correlated
2 L1MB4 99.0 Weakly correlated
3 L1ME3E 99.0 Weakly correlated
4 L1MEC 99.0 Weakly correlated
5 L2A 99.0 Weakly correlated
6 L4_A_MAM 99.0 Weakly correlated
7 LTR49-INT 74.0 Weakly correlated
8 MER4-INT 74.0 Weakly correlated