ZRdb KZFP & Repeats
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Human_ZNF735

  • Protein
    Putative zinc finger protein 735
  • Length
    412
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    28.9 Mya
  • Time of Changing in binding specificity
    28.9 Mya
  • Uniprot_ID
    P0CB33
  • NCBI_ID
    730291
Sequence:
MAKRPGPPGSREMGLLTFRDIAIEFSLAEWQCLDHAQQNLYRDVMLENYRNLFSLGMTVSKPDLIACLEQNKEPQNIKRNEMAAKHPVTCSHFNQDLQPEQSIKDSLQKVIPRTYGKCGHENLQLKKCCKRVDECEVHKGGYNDLNQCLSNTQNKIFQTHKCVKVFSKFSNSNRHNARYTGKKHLKCKKYGKSFCMFSHLNQHQIIHTKEKSYKCEECGKSFNHSSSGTTHKRILTGEKPYRCEECGKAFRWPSNLTRHKRIHTGEKPYACEECGQAFRRSSTLTNHKRIHTGERPYKCEECGKAFSVSSALIYHKRIHTGEKPYTCEECGKAFNCSSTLKTHKIIHTGEKPYTCEECGRTFNCSSTVKAHKRIHTGEKPYKCEECDKAFKWHSSLAKHKIIHTGEKPYKCK
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 16..87
2 dec2h2 157..179
3 dec2h2 185..207
4 dec2h2 213..235
5 C2h2 241..263
6 C2h2 269..291
7 C2h2 297..319
8 C2h2 325..347
9 C2h2 353..375
10 C2h2 381..403
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of DNA-templated transcription
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 HERVH-int 163 **** 28.9 Highly correlated
2 L1PB1 161 **** 74.0 Weakly correlated
3 MIRb 134 **** 99.0 Weakly correlated
4 LTR7B 125 **** 28.9 Highly correlated
5 L1PA3 103 **** 19.6 Weakly correlated
6 L2a 91 n.s 99.0 Weakly correlated
7 L2c 87 ** 99.0 Weakly correlated
8 L1PBa 84 **** 74.0 Weakly correlated
9 AluY 73 n.s 74.0 Weakly correlated
10 MIR 68 n.s 99.0 Weakly correlated
11 MIRc 56 **** 99.0 Weakly correlated
12 MLT1A0 56 **** 99.0 Weakly correlated
13 MLT1A 55 **** 99.0 Weakly correlated
14 THE1B 54 **** 43.0 Moderately correlated
15 L2b 47 n.s 99.0 Weakly correlated
16 MIR3 47 **** 99.0 Weakly correlated
17 AluSx 46 n.s 74.0 Weakly correlated
18 AluJb 43 n.s 74.0 Weakly correlated
19 L1MB7 43 *** 99.0 Weakly correlated
20 LTR8 41 **** 43.0 Moderately correlated
21 L1ME1 40 n.s 99.0 Weakly correlated
22 AluSx1 39 n.s 74.0 Weakly correlated
23 L2 36 n.s 99.0 Weakly correlated
24 AluJr 30 n.s 74.0 Weakly correlated
25 AluSz 30 n.s 74.0 Weakly correlated
26 SVA_F 30 **** 0.0 Weakly correlated
27 L1MC4 28 * 99.0 Weakly correlated
28 L1MB8 27 ** 99.0 Weakly correlated
29 MLT2B3 27 **** 99.0 Weakly correlated
30 L1MEd 26 * 99.0 Weakly correlated
31 L1PB3 25 **** 74.0 Weakly correlated
32 AluJo 23 n.s 74.0 Weakly correlated
33 L1MC5a 23 ** 99.0 Weakly correlated
34 AluSq2 22 n.s 74.0 Weakly correlated
35 L1ME4a 21 n.s 99.0 Weakly correlated
36 MLT2A2 21 **** 74.0 Weakly correlated
37 L1M5 20 n.s 99.0 Weakly correlated
38 L1MC3 20 n.s 99.0 Weakly correlated
39 L3 20 n.s 99.0 Weakly correlated
40 MLT1D 20 n.s 99.0 Weakly correlated
41 L1ME2 19 n.s 99.0 Weakly correlated
42 MLT1C 19 n.s 94.0 Weakly correlated
43 MSTA 19 n.s 43.0 Moderately correlated
44 AluSc8 17 n.s 74.0 Weakly correlated
45 L1M4 17 n.s 99.0 Weakly correlated
46 LTR8B 17 **** 43.0 Moderately correlated
47 MLT1B 17 n.s 99.0 Weakly correlated
48 AluSc 16 n.s 74.0 Weakly correlated
49 AluSz6 16 n.s 74.0 Weakly correlated
50 HAL1 16 n.s 99.0 Weakly correlated
51 L1MEc 16 n.s 99.0 Weakly correlated
52 MER34A 15 **** 99.0 Weakly correlated
53 MLT2A1 15 **** 74.0 Weakly correlated
54 AluSp 14 n.s 74.0 Weakly correlated
55 L1ME4b 14 n.s 99.0 Weakly correlated
56 L1MEg 14 n.s 99.0 Weakly correlated
57 AluSx3 13 n.s 74.0 Weakly correlated
58 L1MB3 13 n.s 99.0 Weakly correlated
59 L1P3 13 ** 74.0 Weakly correlated
60 ERVL-E-int 12 n.s 99.0 Weakly correlated
61 L1MC1 12 n.s 99.0 Weakly correlated
62 L1MD1 12 n.s 99.0 Weakly correlated
63 L1MD2 12 n.s 99.0 Weakly correlated
64 LTR33 12 ** 99.0 Weakly correlated
65 L1M2 11 n.s 99.0 Weakly correlated
66 L1PB2 11 ** 74.0 Weakly correlated
67 MLT1F 11 *** 99.0 Weakly correlated
68 MLT1L 11 * 99.0 Weakly correlated
69 L1MA3 10 n.s 74.0 Weakly correlated
70 L1MC5 10 n.s 99.0 Weakly correlated
71 L1PB4 10 n.s 99.0 Weakly correlated
72 L1PBb 10 **** 74.0 Weakly correlated
73 MLT1A1 10 ** 87.0 Weakly correlated
74 MLT1J 10 n.s 99.0 Weakly correlated
75 SVA_D 10 ** 15.2 Weakly correlated
76 SVA_E 10 **** 0.0 Weakly correlated
77 L1MA2 9 n.s 74.0 Weakly correlated
78 L1MA4A 9 n.s 87.0 Weakly correlated
79 L1MB5 9 n.s 99.0 Weakly correlated
80 L1ME3A 9 n.s 99.0 Weakly correlated
81 L1PA2 9 n.s 15.2 Weakly correlated
82 L1PA4 9 n.s 19.6 Weakly correlated
83 LTR12C 9 n.s 19.6 Weakly correlated
84 LTR16E2 9 **** 99.0 Weakly correlated
85 LTR7 9 *** 19.6 Weakly correlated
86 MER39 9 *** 74.0 Weakly correlated
87 MSTA-int 9 n.s 43.0 Moderately correlated
88 THE1B-int 9 n.s 43.0 Moderately correlated
89 AluSg 8 n.s 74.0 Weakly correlated
90 ERV3-16A3_I-int 8 n.s 99.0 Weakly correlated
91 L1PA7 8 n.s 74.0 Weakly correlated
92 LTR16 8 *** 99.0 Weakly correlated
93 MLT1I 8 n.s 99.0 Weakly correlated
94 MLT1J2 8 ** 99.0 Weakly correlated
95 MLT2B5 8 **** 87.0 Weakly correlated
96 AluYj4 7 *** 0.0 Weakly correlated
97 ERVL-B4-int 7 n.s 99.0 Weakly correlated
98 FRAM 7 ** 74.0 Weakly correlated
99 HERVL-int 7 n.s 74.0 Weakly correlated
100 L1M1 7 n.s 74.0 Weakly correlated
101 L1MA9 7 n.s 99.0 Weakly correlated
102 L1ME3 7 n.s 99.0 Weakly correlated
103 L1PA17 7 n.s 74.0 Weakly correlated
104 L1PA5 7 n.s 19.6 Weakly correlated
105 MER21B 7 * 99.0 Weakly correlated
106 MLT1G1 7 ** 99.0 Weakly correlated
107 MSTD 7 n.s 74.0 Weakly correlated
108 THE1D-int 7 n.s 28.9 Highly correlated
109 AluSg7 6 n.s 74.0 Weakly correlated
110 FLAM_C 6 n.s 74.0 Weakly correlated
111 L1M3 6 n.s 99.0 Weakly correlated
112 L1MB2 6 n.s 99.0 Weakly correlated
113 L1MCa 6 n.s 99.0 Weakly correlated
114 L1PA10 6 n.s 74.0 Weakly correlated
115 L1PA6 6 n.s 28.9 Highly correlated
116 LTR16A1 6 ** 99.0 Weakly correlated
117 LTR16C 6 n.s 99.0 Weakly correlated
118 LTR8A 6 ** 43.0 Moderately correlated
119 MER34 6 **** 87.0 Weakly correlated
120 MER34A1 6 **** 99.0 Weakly correlated
121 MER52A 6 n.s 74.0 Weakly correlated
122 MLT1F2 6 n.s 99.0 Weakly correlated
123 MLT1H1 6 * 99.0 Weakly correlated
124 MLT1K 6 n.s 99.0 Weakly correlated
125 MLT2B2 6 ** 99.0 Weakly correlated
126 MamRTE1 6 * 99.0 Weakly correlated
127 AluJr4 5 n.s 74.0 Weakly correlated
128 AluYa5 5 n.s 15.2 Weakly correlated
129 HAL1b 5 n.s 99.0 Weakly correlated
130 HERVL74-int 5 **** 99.0 Weakly correlated
131 L1MD 5 n.s 99.0 Weakly correlated
132 L1ME3B 5 n.s 99.0 Weakly correlated
133 L1ME3Cz 5 n.s 99.0 Weakly correlated
134 L1ME3E 5 n.s 99.0 Weakly correlated
135 L1P1 5 n.s 19.6 Weakly correlated
136 L1P4 5 n.s 74.0 Weakly correlated
137 L1PA15-16 5 n.s 74.0 Weakly correlated
138 L1PA16 5 n.s 74.0 Weakly correlated
139 L1PA8 5 n.s 74.0 Weakly correlated
140 LTR41B 5 **** 99.0 Weakly correlated
141 LTR48B 5 *** 74.0 Weakly correlated
142 MER61-int 5 * 43.0 Moderately correlated
143 MER77B 5 ** 99.0 Weakly correlated
144 MIR1_Amn 5 n.s 319.0 Weakly correlated
145 MLT1E3 5 ** 99.0 Weakly correlated
146 MLT1H 5 n.s 99.0 Weakly correlated
147 MLT1O 5 * 99.0 Weakly correlated
148 MSTB 5 n.s 43.0 Moderately correlated
149 MSTC 5 * 74.0 Weakly correlated
150 MamGypLTR3 5 **** 99.0 Weakly correlated
151 Alu 4 *** 74.0 Weakly correlated
152 AluYm1 4 n.s 19.6 Weakly correlated
153 FAM 4 * 87.0 Weakly correlated
154 HAL1ME 4 n.s 99.0 Weakly correlated
155 L1M4b 4 n.s 99.0 Weakly correlated
156 L1M4c 4 n.s 99.0 Weakly correlated
157 L1M6 4 n.s 99.0 Weakly correlated
158 L1MA1 4 n.s 74.0 Weakly correlated
159 L1MB4 4 n.s 99.0 Weakly correlated
160 L1MC4a 4 n.s 99.0 Weakly correlated
161 L1MD3 4 n.s 99.0 Weakly correlated
162 L1ME4c 4 n.s 99.0 Weakly correlated
163 L1MEf 4 n.s 99.0 Weakly correlated
164 L1PA12 4 n.s 74.0 Weakly correlated
165 L1PA8A 4 n.s 74.0 Weakly correlated
166 L3b 4 n.s 99.0 Weakly correlated
167 L4_C_Mam 4 n.s 99.0 Weakly correlated
168 LOR1b 4 ** 74.0 Weakly correlated
169 LTR10A 4 **** 28.9 Highly correlated
170 LTR16A 4 n.s 99.0 Weakly correlated
171 LTR25-int 4 * 43.0 Moderately correlated
172 LTR49-int 4 n.s 74.0 Weakly correlated
173 LTR7Y 4 **** 8.6 Weakly correlated
174 MER4B-int 4 * 99.0 Weakly correlated
175 MER89-int 4 ** 99.0 Weakly correlated
176 MLT1E2 4 n.s 99.0 Weakly correlated
177 MLT1N2 4 n.s 99.0 Weakly correlated
178 MLT2F 4 * 99.0 Weakly correlated
179 MSTB1 4 n.s 74.0 Weakly correlated
180 MamGypLTR3a 4 *** 99.0 Weakly correlated
181 AluSq 3 n.s 74.0 Weakly correlated
182 AluSx4 3 n.s 74.0 Weakly correlated
183 FLAM_A 3 n.s 74.0 Weakly correlated
184 HERV17-int 3 n.s 28.9 Highly correlated
185 HERV9-int 3 n.s 28.9 Highly correlated
186 HERVL32-int 3 **** 43.0 Moderately correlated
187 HERVL40-int 3 * 99.0 Weakly correlated
188 L1HS 3 n.s 8.6 Weakly correlated
189 L1M4a1 3 n.s 99.0 Weakly correlated
190 L1MA6 3 n.s 87.0 Weakly correlated
191 L1MA7 3 n.s 87.0 Weakly correlated
192 L1MA8 3 n.s 87.0 Weakly correlated
193 L1MB1 3 n.s 99.0 Weakly correlated
194 L1ME2z 3 n.s 99.0 Weakly correlated
195 L1ME3G 3 n.s 99.0 Weakly correlated
196 L1MEh 3 n.s 99.0 Weakly correlated
197 L1MEi 3 n.s 99.0 Weakly correlated
198 L1PA13 3 n.s 74.0 Weakly correlated
199 L1PA15 3 n.s 74.0 Weakly correlated
200 L1PBa1 3 n.s 74.0 Weakly correlated
201 L1PREC2 3 n.s 43.0 Moderately correlated
202 L4_A_Mam 3 n.s 99.0 Weakly correlated
203 LTR105_Mam 3 *** 99.0 Weakly correlated
204 LTR12E 3 *** 19.6 Weakly correlated
205 LTR39 3 * 43.0 Moderately correlated
206 LTR41 3 * 99.0 Weakly correlated
207 LTR67B 3 n.s 99.0 Weakly correlated
208 LTR78B 3 n.s 99.0 Weakly correlated
209 LTR79 3 n.s 99.0 Weakly correlated
210 LTR82B 3 ** 99.0 Weakly correlated
211 LTR88b 3 ** 99.0 Weakly correlated
212 MER48 3 **** 28.9 Highly correlated
213 MER4A1 3 n.s 74.0 Weakly correlated
214 MER4D1 3 n.s 74.0 Weakly correlated
215 MER4E1 3 * 74.0 Weakly correlated
216 MER51A 3 * 43.0 Moderately correlated
217 MER77 3 * 99.0 Weakly correlated
218 MLT1A0-int 3 * 99.0 Weakly correlated
219 MLT1E 3 ** 99.0 Weakly correlated
220 MLT1F1 3 n.s 99.0 Weakly correlated
221 MLT1G 3 n.s 99.0 Weakly correlated
222 MLT1G3 3 n.s 99.0 Weakly correlated
223 MLT1M 3 * 99.0 Weakly correlated
224 MSTB-int 3 n.s 43.0 Moderately correlated
225 MamGypsy2-I 3 n.s 99.0 Weakly correlated
226 THE1C-int 3 n.s 43.0 Moderately correlated
227 THE1D 3 n.s 43.0 Moderately correlated
228 AluSc5 2 n.s 74.0 Weakly correlated
229 AluSg4 2 n.s 74.0 Weakly correlated
230 AluSq10 2 n.s 74.0 Weakly correlated
231 AluYa8 2 *** 15.2 Weakly correlated
232 AmnSINE1 2 * 319.0 Weakly correlated
233 ERVL-int 2 n.s 99.0 Weakly correlated
234 HERV4_I-int 2 * 43.0 Moderately correlated
235 HERVE-int 2 n.s 19.6 Weakly correlated
236 HERVFH21-int 2 ** 28.9 Highly correlated
237 HERVK3-int 2 n.s 28.9 Highly correlated
238 HERVP71A-int 2 * 43.0 Moderately correlated
239 HUERS-P3-int 2 n.s 43.0 Moderately correlated
240 L1M3a 2 * 99.0 Weakly correlated
241 L1M3f 2 n.s 87.0 Weakly correlated
242 L1MA10 2 n.s 99.0 Weakly correlated
243 L1MA5 2 n.s 87.0 Weakly correlated
244 L1MC2 2 n.s 99.0 Weakly correlated
245 L1MDa 2 n.s 99.0 Weakly correlated
246 L1ME3C 2 n.s 99.0 Weakly correlated
247 L1ME3D 2 n.s 99.0 Weakly correlated
248 L1ME3F 2 n.s 99.0 Weakly correlated
249 L1MEj 2 n.s 99.0 Weakly correlated
250 L1PA11 2 n.s 74.0 Weakly correlated
251 L5 2 ** 99.0 Weakly correlated
252 LTR10B1 2 *** 28.9 Highly correlated
253 LTR13 2 n.s 19.6 Weakly correlated
254 LTR16E1 2 n.s 99.0 Weakly correlated
255 LTR1D 2 * 43.0 Moderately correlated
256 LTR2 2 n.s 28.9 Highly correlated
257 LTR22B2 2 **** 28.9 Highly correlated
258 LTR28C 2 * 43.0 Moderately correlated
259 LTR32 2 n.s 43.0 Moderately correlated
260 LTR37A 2 n.s 99.0 Weakly correlated
261 LTR41C 2 * 99.0 Weakly correlated
262 LTR46-int 2 ** 74.0 Weakly correlated
263 LTR50 2 n.s 99.0 Weakly correlated
264 LTR54 2 * 74.0 Weakly correlated
265 LTR76 2 ** 74.0 Weakly correlated
266 LTR78 2 n.s 99.0 Weakly correlated
267 LTR89 2 * 99.0 Weakly correlated
268 MER21-int 2 n.s 99.0 Weakly correlated
269 MER21C 2 n.s 99.0 Weakly correlated
270 MER34C2 2 ** 74.0 Weakly correlated
271 MER39B 2 n.s 74.0 Weakly correlated
272 MER41-int 2 n.s 74.0 Weakly correlated
273 MER4B 2 n.s 74.0 Weakly correlated
274 MER50B 2 * 43.0 Moderately correlated
275 MER57A-int 2 n.s 43.0 Moderately correlated
276 MER65-int 2 n.s 87.0 Weakly correlated
277 MER70-int 2 ** 99.0 Weakly correlated
278 MER76 2 * 99.0 Weakly correlated
279 MER90a 2 n.s 99.0 Weakly correlated
280 MLT1E1 2 * 99.0 Weakly correlated
281 MLT1E1A 2 n.s 99.0 Weakly correlated
282 MLT1H2 2 n.s 99.0 Weakly correlated
283 MLT2B4 2 n.s 99.0 Weakly correlated
284 MLT2C1 2 n.s 99.0 Weakly correlated
285 MLT2D 2 n.s 99.0 Weakly correlated
286 MSTA1 2 ** 74.0 Weakly correlated
287 MamSINE1 2 n.s 99.0 Weakly correlated
288 PABL_B 2 ** 43.0 Moderately correlated
289 PABL_B-int 2 * 74.0 Weakly correlated
290 SVA_B 2 n.s 15.2 Weakly correlated
291 THE1A 2 n.s 43.0 Moderately correlated
292 THE1A-int 2 n.s 43.0 Moderately correlated
293 AluSq4 1 n.s 74.0 Weakly correlated
294 AluYc 1 n.s 74.0 Weakly correlated
295 AluYe5 1 n.s 74.0 Weakly correlated
296 AluYf1 1 n.s 19.6 Weakly correlated
297 AluYh9 1 *** 15.2 Weakly correlated
298 AluYk11 1 * 15.2 Weakly correlated
299 CR1-3_Croc 1 n.s 319.0 Weakly correlated
300 CR1_Mam 1 n.s 99.0 Weakly correlated
301 ERV3-16A3_LTR 1 n.s 99.0 Weakly correlated
302 HERV15-int 1 n.s 28.9 Highly correlated
303 HERV35I-int 1 n.s 43.0 Moderately correlated
304 HERV9NC-int 1 n.s 19.6 Weakly correlated
305 HERVFH19-int 1 * 43.0 Moderately correlated
306 HERVH48-int 1 n.s 28.9 Highly correlated
307 HERVIP10F-int 1 n.s 28.9 Highly correlated
308 Harlequin-int 1 n.s 74.0 Weakly correlated
309 L1M2a 1 n.s 87.0 Weakly correlated
310 L1M2c 1 n.s 87.0 Weakly correlated
311 L1M3b 1 n.s 99.0 Weakly correlated
312 L1M3c 1 n.s 99.0 Weakly correlated
313 L1M3e 1 n.s 99.0 Weakly correlated
314 L1M4a2 1 n.s 99.0 Weakly correlated
315 L1MA4 1 n.s 87.0 Weakly correlated
316 L1MA5A 1 n.s 87.0 Weakly correlated
317 L1MC 1 n.s 99.0 Weakly correlated
318 L1MCb 1 n.s 99.0 Weakly correlated
319 L1MCc 1 n.s 99.0 Weakly correlated
320 L1ME5 1 n.s 99.0 Weakly correlated
321 L1MEg1 1 n.s 99.0 Weakly correlated
322 L1P4e 1 n.s 74.0 Weakly correlated
323 L1PA14 1 n.s 74.0 Weakly correlated
324 L2-1_AMi 1 n.s 319.0 Weakly correlated
325 LFSINE_Vert 1 n.s 319.0 Weakly correlated
326 LOR1-int 1 n.s 74.0 Weakly correlated
327 LOR1a 1 n.s 74.0 Weakly correlated
328 LTR101_Mam 1 n.s 99.0 Weakly correlated
329 LTR104_Mam 1 n.s 99.0 Weakly correlated
330 LTR108c_Mam 1 *** 99.0 Weakly correlated
331 LTR12B 1 n.s 28.9 Highly correlated
332 LTR12F 1 n.s 28.9 Highly correlated
333 LTR13_ 1 ** 28.9 Highly correlated
334 LTR16B1 1 n.s 99.0 Weakly correlated
335 LTR16B2 1 n.s 99.0 Weakly correlated
336 LTR16D 1 n.s 99.0 Weakly correlated
337 LTR19C 1 * 43.0 Moderately correlated
338 LTR1D1 1 n.s 43.0 Moderately correlated
339 LTR1E 1 n.s 43.0 Moderately correlated
340 LTR22 1 ** 28.9 Highly correlated
341 LTR23 1 n.s 74.0 Weakly correlated
342 LTR23-int 1 ** 74.0 Weakly correlated
343 LTR2752 1 n.s 43.0 Moderately correlated
344 LTR29 1 n.s 43.0 Moderately correlated
345 LTR33A 1 n.s 99.0 Weakly correlated
346 LTR38B 1 * 74.0 Weakly correlated
347 LTR38C 1 ** 74.0 Weakly correlated
348 LTR40a 1 n.s 99.0 Weakly correlated
349 LTR44 1 * 74.0 Weakly correlated
350 LTR47A 1 n.s 74.0 Weakly correlated
351 LTR48 1 n.s 74.0 Weakly correlated
352 LTR49 1 n.s 74.0 Weakly correlated
353 LTR54B 1 n.s 74.0 Weakly correlated
354 LTR64 1 * 74.0 Weakly correlated
355 LTR66 1 * 43.0 Moderately correlated
356 LTR6B 1 * 19.6 Weakly correlated
357 LTR75 1 * 99.0 Weakly correlated
358 LTR7C 1 * 28.9 Highly correlated
359 LTR81B 1 n.s 99.0 Weakly correlated
360 LTR84b 1 n.s 99.0 Weakly correlated
361 LTR85a 1 n.s 99.0 Weakly correlated
362 LTR85b 1 n.s 99.0 Weakly correlated
363 LTR85c 1 n.s 99.0 Weakly correlated
364 LTR87 1 n.s 99.0 Weakly correlated
365 LTR91 1 ** 99.0 Weakly correlated
366 LTR9D 1 n.s 43.0 Moderately correlated
367 MER110 1 n.s 99.0 Weakly correlated
368 MER11B 1 n.s 19.6 Weakly correlated
369 MER11C 1 n.s 19.6 Weakly correlated
370 MER129 1 ** 319.0 Weakly correlated
371 MER31-int 1 n.s 99.0 Weakly correlated
372 MER31A 1 n.s 87.0 Weakly correlated
373 MER34B 1 n.s 87.0 Weakly correlated
374 MER34B-int 1 n.s 99.0 Weakly correlated
375 MER34C_ 1 n.s 87.0 Weakly correlated
376 MER41B 1 n.s 74.0 Weakly correlated
377 MER41E 1 * 74.0 Weakly correlated
378 MER4D0 1 n.s 74.0 Weakly correlated
379 MER4E 1 n.s 74.0 Weakly correlated
380 MER50 1 n.s 43.0 Moderately correlated
381 MER50-int 1 n.s 43.0 Moderately correlated
382 MER52-int 1 n.s 99.0 Weakly correlated
383 MER52C 1 n.s 74.0 Weakly correlated
384 MER54B 1 n.s 87.0 Weakly correlated
385 MER57F 1 * 74.0 Weakly correlated
386 MER61A 1 n.s 43.0 Moderately correlated
387 MER61C 1 * 43.0 Moderately correlated
388 MER65A 1 n.s 74.0 Weakly correlated
389 MER65C 1 n.s 74.0 Weakly correlated
390 MER66-int 1 n.s 43.0 Moderately correlated
391 MER66B 1 n.s 43.0 Moderately correlated
392 MER67B 1 n.s 99.0 Weakly correlated
393 MER68 1 n.s 99.0 Weakly correlated
394 MER68C 1 ** 99.0 Weakly correlated
395 MER73 1 * 87.0 Weakly correlated
396 MER74A 1 n.s 99.0 Weakly correlated
397 MER74B 1 n.s 99.0 Weakly correlated
398 MER76-int 1 * 99.0 Weakly correlated
399 MER83B-int 1 * 99.0 Weakly correlated
400 MER89 1 n.s 99.0 Weakly correlated
401 MLT1E2-int 1 ** 99.0 Weakly correlated
402 MLT1J1 1 n.s 99.0 Weakly correlated
403 MLT1J2-int 1 n.s 99.0 Weakly correlated
404 MLT2B1 1 n.s 99.0 Weakly correlated
405 MamGyp-int 1 n.s 99.0 Weakly correlated
406 MamGypLTR1a 1 n.s 99.0 Weakly correlated
407 MamGypLTR1c 1 n.s 99.0 Weakly correlated
408 PABL_A-int 1 n.s 74.0 Weakly correlated
409 PRIMA41-int 1 n.s 74.0 Weakly correlated
410 Penelope1_Vert 1 * 319.0 Weakly correlated
411 Plat_L3 1 n.s 99.0 Weakly correlated
412 X6A_LINE 1 * 99.0 Weakly correlated
413 X7A_LINE 1 * 319.0 Weakly correlated
414 X7B_LINE 1 * 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1PB1 153 **** 74.0 Weakly correlated
2 HERVH-int 141 **** 28.9 Highly correlated
3 LTR7B 106 **** 28.9 Highly correlated
4 L1PA3 100 **** 19.6 Weakly correlated
5 L1PBa 79 **** 74.0 Weakly correlated
6 MIRb 45 n.s 99.0 Weakly correlated
7 L2a 45 n.s 99.0 Weakly correlated
8 L2c 45 n.s 99.0 Weakly correlated
9 MLT1A 36 **** 99.0 Weakly correlated
10 THE1B 35 **** 43.0 Moderately correlated
11 MLT1A0 32 **** 99.0 Weakly correlated
12 MIR 31 n.s 99.0 Weakly correlated
13 L1ME1 30 n.s 99.0 Weakly correlated
14 L1MB7 29 n.s 99.0 Weakly correlated
15 MLT2B3 26 **** 99.0 Weakly correlated
16 L2b 22 n.s 99.0 Weakly correlated
17 L1PB3 22 **** 74.0 Weakly correlated
18 L1MB8 21 n.s 99.0 Weakly correlated
19 MIRc 19 n.s 99.0 Weakly correlated
20 MLT2A2 19 **** 74.0 Weakly correlated
21 LTR8 19 **** 43.0 Moderately correlated
22 L1MC5a 15 n.s 99.0 Weakly correlated
23 L2 15 n.s 99.0 Weakly correlated
24 L3 15 n.s 99.0 Weakly correlated
25 L1MEd 14 n.s 99.0 Weakly correlated
26 L1ME2 13 n.s 99.0 Weakly correlated
27 MLT2A1 13 **** 74.0 Weakly correlated
28 MER34A 12 **** 99.0 Weakly correlated
29 L1MC4 12 n.s 99.0 Weakly correlated
30 L1ME4a 12 n.s 99.0 Weakly correlated
31 MLT1C 12 n.s 94.0 Weakly correlated
32 L1MEg 12 n.s 99.0 Weakly correlated
33 MLT1D 11 n.s 99.0 Weakly correlated
34 L1PB2 11 ** 74.0 Weakly correlated
35 L1M5 10 n.s 99.0 Weakly correlated
36 L1PB4 10 n.s 99.0 Weakly correlated
37 L1PBb 10 **** 74.0 Weakly correlated
38 L1MD2 10 n.s 99.0 Weakly correlated
39 L1MA3 9 n.s 74.0 Weakly correlated
40 HAL1 9 n.s 99.0 Weakly correlated
41 L1MD1 9 n.s 99.0 Weakly correlated
42 L1MC1 9 n.s 99.0 Weakly correlated
43 L1M4 9 n.s 99.0 Weakly correlated
44 L1M2 8 n.s 99.0 Weakly correlated
45 AluJr 8 n.s 74.0 Weakly correlated
46 ERVL-E-int 8 n.s 99.0 Weakly correlated
47 LTR7 8 *** 19.6 Weakly correlated
48 MIR3 8 n.s 99.0 Weakly correlated
49 L1MC3 8 n.s 99.0 Weakly correlated
50 L1ME4b 8 n.s 99.0 Weakly correlated
51 LTR33 7 n.s 99.0 Weakly correlated
52 MLT2B5 7 **** 87.0 Weakly correlated
53 MLT1B 7 n.s 99.0 Weakly correlated
54 THE1B-int 7 n.s 43.0 Moderately correlated
55 L1MA4A 7 n.s 87.0 Weakly correlated
56 MLT1G1 6 * 99.0 Weakly correlated
57 MLT2B2 6 ** 99.0 Weakly correlated
58 L1MA2 6 n.s 74.0 Weakly correlated
59 ERV3-16A3_I-int 6 n.s 99.0 Weakly correlated
60 MLT1A1 6 n.s 87.0 Weakly correlated
61 L1MB5 6 n.s 99.0 Weakly correlated
62 L1MEc 6 n.s 99.0 Weakly correlated
63 MER39 6 * 74.0 Weakly correlated
64 MLT1J 6 n.s 99.0 Weakly correlated
65 L1PA4 6 n.s 19.6 Weakly correlated
66 LTR16 6 ** 99.0 Weakly correlated
67 MLT1F 6 n.s 99.0 Weakly correlated
68 ERVL-B4-int 5 n.s 99.0 Weakly correlated
69 L1PA7 5 n.s 74.0 Weakly correlated
70 MER34 5 *** 87.0 Weakly correlated
71 L1ME3 5 n.s 99.0 Weakly correlated
72 MER61-int 5 * 43.0 Moderately correlated
73 MLT1I 5 n.s 99.0 Weakly correlated
74 AluJb 5 n.s 74.0 Weakly correlated
75 L1M1 5 n.s 74.0 Weakly correlated
76 L1MC5 5 n.s 99.0 Weakly correlated
77 LTR48B 5 *** 74.0 Weakly correlated
78 L1MCa 5 n.s 99.0 Weakly correlated
79 L1PA10 5 n.s 74.0 Weakly correlated
80 MER34A1 5 **** 99.0 Weakly correlated
81 L1ME3A 5 n.s 99.0 Weakly correlated
82 MSTA 5 n.s 43.0 Moderately correlated
83 HAL1ME 4 n.s 99.0 Weakly correlated
84 L1PA2 4 n.s 15.2 Weakly correlated
85 LTR16E2 4 * 99.0 Weakly correlated
86 LTR8A 4 * 43.0 Moderately correlated
87 AluSz 4 n.s 74.0 Weakly correlated
88 L1MB4 4 n.s 99.0 Weakly correlated
89 L1PA17 4 n.s 74.0 Weakly correlated
90 LTR8B 4 * 43.0 Moderately correlated
91 MER4B-int 4 * 99.0 Weakly correlated
92 MLT1L 4 n.s 99.0 Weakly correlated
93 L1MA1 4 n.s 74.0 Weakly correlated
94 LOR1b 4 ** 74.0 Weakly correlated
95 MSTA-int 4 n.s 43.0 Moderately correlated
96 HERVL74-int 4 **** 99.0 Weakly correlated
97 L1PA5 4 n.s 19.6 Weakly correlated
98 L1PA6 4 n.s 28.9 Highly correlated
99 LTR7Y 4 **** 8.6 Weakly correlated
100 L1PA15-16 4 n.s 74.0 Weakly correlated
101 LTR49-int 4 n.s 74.0 Weakly correlated
102 MER89-int 4 ** 99.0 Weakly correlated
103 MLT1J2 4 n.s 99.0 Weakly correlated
104 THE1D-int 4 n.s 28.9 Highly correlated
105 HERV9-int 3 n.s 28.9 Highly correlated
106 L1ME3B 3 n.s 99.0 Weakly correlated
107 MER48 3 **** 28.9 Highly correlated
108 HERVL-int 3 n.s 74.0 Weakly correlated
109 L1ME3E 3 n.s 99.0 Weakly correlated
110 MLT1G3 3 n.s 99.0 Weakly correlated
111 AluSz6 3 n.s 74.0 Weakly correlated
112 HAL1b 3 n.s 99.0 Weakly correlated
113 L1M4a1 3 n.s 99.0 Weakly correlated
114 L1MA9 3 n.s 99.0 Weakly correlated
115 L1MB1 3 n.s 99.0 Weakly correlated
116 LTR39 3 * 43.0 Moderately correlated
117 MLT1K 3 n.s 99.0 Weakly correlated
118 AluJo 3 n.s 74.0 Weakly correlated
119 L1MB3 3 n.s 99.0 Weakly correlated
120 L1ME2z 3 n.s 99.0 Weakly correlated
121 L1PA16 3 n.s 74.0 Weakly correlated
122 L1PA8 3 n.s 74.0 Weakly correlated
123 LTR82B 3 ** 99.0 Weakly correlated
124 MamGypLTR3a 3 ** 99.0 Weakly correlated
125 L1PA8A 3 n.s 74.0 Weakly correlated
126 L1PBa1 3 n.s 74.0 Weakly correlated
127 L1M6 3 n.s 99.0 Weakly correlated
128 L1P3 3 n.s 74.0 Weakly correlated
129 MSTD 3 n.s 74.0 Weakly correlated
130 AluY 3 n.s 74.0 Weakly correlated
131 L1HS 3 n.s 8.6 Weakly correlated
132 L4_C_Mam 3 n.s 99.0 Weakly correlated
133 MLT1H 3 n.s 99.0 Weakly correlated
134 MamGypLTR3 3 *** 99.0 Weakly correlated
135 AluSc8 2 n.s 74.0 Weakly correlated
136 HERV4_I-int 2 * 43.0 Moderately correlated
137 HERVP71A-int 2 * 43.0 Moderately correlated
138 L1ME3F 2 n.s 99.0 Weakly correlated
139 MER77 2 n.s 99.0 Weakly correlated
140 MLT1H2 2 n.s 99.0 Weakly correlated
141 MLT1M 2 n.s 99.0 Weakly correlated
142 MLT2F 2 n.s 99.0 Weakly correlated
143 HERVK3-int 2 n.s 28.9 Highly correlated
144 L1MA7 2 n.s 87.0 Weakly correlated
145 L1ME3D 2 n.s 99.0 Weakly correlated
146 L1ME3G 2 n.s 99.0 Weakly correlated
147 LTR105_Mam 2 ** 99.0 Weakly correlated
148 MSTB1 2 n.s 74.0 Weakly correlated
149 AluJr4 2 n.s 74.0 Weakly correlated
150 L1MC4a 2 n.s 99.0 Weakly correlated
151 LTR46-int 2 ** 74.0 Weakly correlated
152 MER34C2 2 ** 74.0 Weakly correlated
153 MLT1O 2 n.s 99.0 Weakly correlated
154 MSTB-int 2 n.s 43.0 Moderately correlated
155 AluSx3 2 n.s 74.0 Weakly correlated
156 LTR41 2 n.s 99.0 Weakly correlated
157 MLT1H1 2 n.s 99.0 Weakly correlated
158 MamGypsy2-I 2 n.s 99.0 Weakly correlated
159 L1MA10 2 n.s 99.0 Weakly correlated
160 LTR16A 2 n.s 99.0 Weakly correlated
161 LTR16A1 2 n.s 99.0 Weakly correlated
162 LTR25-int 2 n.s 43.0 Moderately correlated
163 MER21-int 2 n.s 99.0 Weakly correlated
164 THE1C-int 2 n.s 43.0 Moderately correlated
165 L1M3a 2 * 99.0 Weakly correlated
166 L1MEf 2 n.s 99.0 Weakly correlated
167 LTR16C 2 n.s 99.0 Weakly correlated
168 MER41-int 2 n.s 74.0 Weakly correlated
169 MLT1E2 2 n.s 99.0 Weakly correlated
170 MLT1G 2 n.s 99.0 Weakly correlated
171 MSTC 2 n.s 74.0 Weakly correlated
172 L1M4c 2 n.s 99.0 Weakly correlated
173 L1MA5 2 n.s 87.0 Weakly correlated
174 L1MB2 2 n.s 99.0 Weakly correlated
175 L1MEh 2 n.s 99.0 Weakly correlated
176 LTR54 2 * 74.0 Weakly correlated
177 HERV17-int 2 n.s 28.9 Highly correlated
178 HERVFH21-int 2 ** 28.9 Highly correlated
179 HUERS-P3-int 2 n.s 43.0 Moderately correlated
180 L1MD3 2 n.s 99.0 Weakly correlated
181 L1PA15 2 n.s 74.0 Weakly correlated
182 MER21C 2 n.s 99.0 Weakly correlated
183 MSTA1 2 ** 74.0 Weakly correlated
184 HERV9NC-int 1 n.s 19.6 Weakly correlated
185 Harlequin-int 1 n.s 74.0 Weakly correlated
186 L1M4b 1 n.s 99.0 Weakly correlated
187 L1ME3Cz 1 n.s 99.0 Weakly correlated
188 L1ME4c 1 n.s 99.0 Weakly correlated
189 L1ME5 1 n.s 99.0 Weakly correlated
190 LTR22B2 1 *** 28.9 Highly correlated
191 LTR28C 1 n.s 43.0 Moderately correlated
192 LTR38B 1 * 74.0 Weakly correlated
193 MER21B 1 n.s 99.0 Weakly correlated
194 MER57A-int 1 n.s 43.0 Moderately correlated
195 MLT2B1 1 n.s 99.0 Weakly correlated
196 MLT2D 1 n.s 99.0 Weakly correlated
197 AluSc5 1 n.s 74.0 Weakly correlated
198 AluSg7 1 n.s 74.0 Weakly correlated
199 HERVL40-int 1 n.s 99.0 Weakly correlated
200 L1P4 1 n.s 74.0 Weakly correlated
201 LOR1a 1 n.s 74.0 Weakly correlated
202 LTR12C 1 n.s 19.6 Weakly correlated
203 LTR2 1 n.s 28.9 Highly correlated
204 LTR50 1 n.s 99.0 Weakly correlated
205 MER34B 1 n.s 87.0 Weakly correlated
206 MER41E 1 * 74.0 Weakly correlated
207 MER4A1 1 n.s 74.0 Weakly correlated
208 MLT1E2-int 1 ** 99.0 Weakly correlated
209 AluSg 1 n.s 74.0 Weakly correlated
210 AluSg4 1 n.s 74.0 Weakly correlated
211 L1MA5A 1 n.s 87.0 Weakly correlated
212 L1ME3C 1 n.s 99.0 Weakly correlated
213 L1PA11 1 n.s 74.0 Weakly correlated
214 LTR1E 1 n.s 43.0 Moderately correlated
215 LTR78B 1 n.s 99.0 Weakly correlated
216 LTR7C 1 * 28.9 Highly correlated
217 LTR87 1 n.s 99.0 Weakly correlated
218 MER129 1 ** 319.0 Weakly correlated
219 MER39B 1 n.s 74.0 Weakly correlated
220 MER61C 1 * 43.0 Moderately correlated
221 MLT1E1A 1 n.s 99.0 Weakly correlated
222 HERVE-int 1 n.s 19.6 Weakly correlated
223 HERVFH19-int 1 * 43.0 Moderately correlated
224 HERVH48-int 1 n.s 28.9 Highly correlated
225 L1MCc 1 n.s 99.0 Weakly correlated
226 LTR16B1 1 n.s 99.0 Weakly correlated
227 LTR2752 1 n.s 43.0 Moderately correlated
228 LTR41B 1 n.s 99.0 Weakly correlated
229 LTR49 1 n.s 74.0 Weakly correlated
230 LTR78 1 n.s 99.0 Weakly correlated
231 MER34B-int 1 n.s 99.0 Weakly correlated
232 MER68C 1 ** 99.0 Weakly correlated
233 MER76 1 n.s 99.0 Weakly correlated
234 MER77B 1 n.s 99.0 Weakly correlated
235 MER90a 1 n.s 99.0 Weakly correlated
236 MLT1E3 1 n.s 99.0 Weakly correlated
237 FLAM_A 1 n.s 74.0 Weakly correlated
238 FRAM 1 n.s 74.0 Weakly correlated
239 L1M2a 1 n.s 87.0 Weakly correlated
240 L1MEg1 1 n.s 99.0 Weakly correlated
241 L1PA13 1 n.s 74.0 Weakly correlated
242 LOR1-int 1 n.s 74.0 Weakly correlated
243 LTR9D 1 n.s 43.0 Moderately correlated
244 MER4B 1 n.s 74.0 Weakly correlated
245 MER4D1 1 n.s 74.0 Weakly correlated
246 MER50-int 1 n.s 43.0 Moderately correlated
247 MER50B 1 n.s 43.0 Moderately correlated
248 MER51A 1 n.s 43.0 Moderately correlated
249 MER65C 1 n.s 74.0 Weakly correlated
250 AluSp 1 n.s 74.0 Weakly correlated
251 CR1_Mam 1 n.s 99.0 Weakly correlated
252 ERV3-16A3_LTR 1 n.s 99.0 Weakly correlated
253 HERVL32-int 1 * 43.0 Moderately correlated
254 L1M2c 1 n.s 87.0 Weakly correlated
255 L1M3b 1 n.s 99.0 Weakly correlated
256 L1M4a2 1 n.s 99.0 Weakly correlated
257 L1MA4 1 n.s 87.0 Weakly correlated
258 L1MD 1 n.s 99.0 Weakly correlated
259 L4_B_Mam 1 n.s 99.0 Weakly correlated
260 L5 1 * 99.0 Weakly correlated
261 MER110 1 n.s 99.0 Weakly correlated
262 MER31A 1 n.s 87.0 Weakly correlated
263 MER4D0 1 n.s 74.0 Weakly correlated
264 MER66-int 1 n.s 43.0 Moderately correlated
265 MLT1E1 1 n.s 99.0 Weakly correlated
266 MamRTE1 1 n.s 99.0 Weakly correlated
267 PABL_A-int 1 n.s 74.0 Weakly correlated
268 L1M3e 1 n.s 99.0 Weakly correlated
269 L1MA6 1 n.s 87.0 Weakly correlated
270 L1P1 1 n.s 19.6 Weakly correlated
271 L1PA12 1 n.s 74.0 Weakly correlated
272 L2-1_AMi 1 n.s 319.0 Weakly correlated
273 LTR29 1 n.s 43.0 Moderately correlated
274 LTR32 1 n.s 43.0 Moderately correlated
275 LTR48 1 n.s 74.0 Weakly correlated
276 LTR67B 1 n.s 99.0 Weakly correlated
277 MER54B 1 n.s 87.0 Weakly correlated
278 MER65-int 1 n.s 87.0 Weakly correlated
279 MER70-int 1 n.s 99.0 Weakly correlated
280 MER73 1 * 87.0 Weakly correlated
281 MER74A 1 n.s 99.0 Weakly correlated
282 MER83B-int 1 * 99.0 Weakly correlated
283 MER89 1 n.s 99.0 Weakly correlated
284 MamGypLTR1a 1 n.s 99.0 Weakly correlated
285 PABL_B 1 * 43.0 Moderately correlated
286 PABL_B-int 1 n.s 74.0 Weakly correlated
287 Penelope1_Vert 1 * 319.0 Weakly correlated
288 L1M3c 1 n.s 99.0 Weakly correlated
289 L1MA8 1 n.s 87.0 Weakly correlated
290 L1MC2 1 n.s 99.0 Weakly correlated
291 L1P4e 1 n.s 74.0 Weakly correlated
292 L1PA14 1 n.s 74.0 Weakly correlated
293 L4_A_Mam 1 n.s 99.0 Weakly correlated
294 LTR101_Mam 1 n.s 99.0 Weakly correlated
295 LTR75 1 * 99.0 Weakly correlated
296 MER31-int 1 n.s 99.0 Weakly correlated
297 MER52-int 1 n.s 99.0 Weakly correlated
298 MER61A 1 n.s 43.0 Moderately correlated
299 MER66B 1 n.s 43.0 Moderately correlated
300 MER67B 1 n.s 99.0 Weakly correlated
301 MER76-int 1 * 99.0 Weakly correlated
302 MLT1F1 1 n.s 99.0 Weakly correlated
303 MLT1F2 1 n.s 99.0 Weakly correlated
304 MLT1J2-int 1 n.s 99.0 Weakly correlated
305 MLT2B4 1 n.s 99.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 MLT2A1 74.0 Weakly correlated
2 MLT2A2 74.0 Weakly correlated
3 MLT2B2 99.0 Weakly correlated
4 MLT2B3 99.0 Weakly correlated
5 MLT2B5 87.0 Weakly correlated