ZRdb KZFP & Repeats
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LINE_L2B_3END

  • Name
    L2B_3END
  • Repbase
    L2B
  • Type
    LINE
  • Emergence
    99.0 Mya
  • Dfam Id
    DF0000360
Description :

L2 3' region. Starts at 2910 of L2 consensus with ~170 bp overlap. MIRand MIRb share 3' terminal end homology over ~50bp.
Consensus sequence The consensus sequences obtained from Dfam are derived from the seed alignment using a specialized caller. :
tcgcacgatctggccccgctacctctccggcctcatctcctaccactctccccttgctcactctgctccagccacactggcctccttgctgttcctcgaacacgccangctcnctcccgcctcagggcctttgcacntgctgttccctctgcctggaacgcccttccccacctcttcgcctggccaactcctactcatccttcaggtctcagctcaaatgtcacctcctccgggaagccctccctgaccccccaggccgggtcaggcgccctcctctgggcccccccagtcctaccctgccactctgggttatnattgtctgnttacatgtctgtctcccccactagactgtgagctccgtgagggcagggaccgngtctgtcttgttcaccgctgtatccccagcgcctagcacagngcctggcacacagtaggcgctcagtaaatatttgttgaatgaatgaat
Repeats structure For certain families, there exists a curated collection of TE-derived proteins, which constitutes a non-redundant set. As a results, several families may lack an associated coding sequences directly linked to them. The annotation for these families is obtained from Dfam. :
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequence on the genome. :
# KZFP name Record number KZFP age(Mya) Time correlation with Repeats
1 ZNF382 4528 99.0 Highly correlated
2 ZKSCAN1 4020 160.0 Weakly correlated
3 ZNF263 2616 180.0 Weakly correlated
4 ZNF394 1696 99.0 Highly correlated
5 ZNF92 1665 28.9 Weakly correlated
6 ZFP37 1563 99.0 Highly correlated
7 ZNF766 1443 43.0 Weakly correlated
8 ZNF2 1328 99.0 Highly correlated
9 ZKSCAN8 1291 160.0 Weakly correlated
10 ZNF436 1253 180.0 Weakly correlated
11 ZFP69B 831 99.0 Highly correlated
12 ZNF18 793 160.0 Weakly correlated
13 ZNF680 723 28.9 Weakly correlated
14 ZNF324 708 99.0 Highly correlated
15 ZNF589 690 28.9 Weakly correlated
16 ZNF175 643 94.0 Moderately correlated
17 ZNF317 614 99.0 Highly correlated
18 ZNF101 610 43.0 Weakly correlated
19 ZNF705B 567 28.9 Weakly correlated
20 ZNF534 566 19.6 Weakly correlated
21 ZNF610 522 28.9 Weakly correlated
22 ZNF792 520 94.0 Moderately correlated
23 ZNF479 477 6.4 Weakly correlated
24 ZIM3 476 87.0 Moderately correlated
25 ZNF584 446 99.0 Highly correlated
26 ZNF257 427 0.0 Weakly correlated
27 ZNF679 422 28.9 Weakly correlated
28 ZNF558 391 99.0 Highly correlated
29 ZNF701 384 28.9 Weakly correlated
30 ZNF197 364 99.0 Highly correlated
31 ZNF554 345 99.0 Highly correlated
32 ZNF189 340 99.0 Highly correlated
33 ZNF705D 329 28.9 Weakly correlated
34 ZNF723 302 15.2 Weakly correlated
35 ZNF251 266 94.0 Moderately correlated
36 ZNF793 248 99.0 Highly correlated
37 ZNF528 224 43.0 Weakly correlated
38 ZNF597 208 94.0 Moderately correlated
39 ZNF75D 201 94.0 Moderately correlated
40 ZNF320 166 28.9 Weakly correlated
41 ZNF585B 147 99.0 Highly correlated
42 ZNF274 137 99.0 Highly correlated
43 ZNF282 130 319.0 Weakly correlated
44 ZNF28 127 28.9 Weakly correlated
45 ZNF8 123 99.0 Highly correlated
46 ZNF485 118 94.0 Moderately correlated
47 ZKSCAN5 117 160.0 Weakly correlated
48 ZNF133 114 99.0 Highly correlated
49 ZFP57 108 87.0 Moderately correlated
50 ZNF140 108 99.0 Highly correlated
51 ZNF547 105 74.0 Weakly correlated
52 ZNF490 95 43.0 Weakly correlated
53 ZNF264 89 99.0 Highly correlated
54 ZNF506 86 28.9 Weakly correlated
55 ZNF641 85 99.0 Highly correlated
56 ZNF707 84 74.0 Weakly correlated
57 ZNF331 74 94.0 Moderately correlated
58 ZNF486 72 8.6 Weakly correlated
59 ZNF549 68 87.0 Moderately correlated
60 ZNF425 67 94.0 Moderately correlated
61 ZNF202 66 160.0 Weakly correlated
62 ZNF585A 64 99.0 Highly correlated
63 ZNF671 62 94.0 Moderately correlated
64 ZNF695 60 28.9 Weakly correlated
65 ZNF273 58 28.9 Weakly correlated
66 ZNF429 56 28.9 Weakly correlated
67 ZNF519 55 19.6 Weakly correlated
68 ZNF682 51 28.9 Weakly correlated
69 ZNF778 50 74.0 Weakly correlated
70 ZNF468 47 28.9 Weakly correlated
71 ZNF735 47 28.9 Weakly correlated
72 ZNF816 46 28.9 Weakly correlated
73 ZNF169 39 94.0 Moderately correlated
74 ZNF563 39 28.9 Weakly correlated
75 ZNF141 38 43.0 Weakly correlated
76 ZNF26 37 99.0 Highly correlated
77 ZNF441 37 43.0 Weakly correlated
78 ZNF347 35 43.0 Weakly correlated
79 ZNF182 34 99.0 Highly correlated
80 ZNF765 34 8.6 Weakly correlated
81 ZNF823 34 43.0 Weakly correlated
82 ZFP28 32 99.0 Highly correlated
83 ZNF84 32 99.0 Highly correlated
84 ZNF786 30 99.0 Highly correlated
85 ZNF44 26 43.0 Weakly correlated
86 ZNF334 25 99.0 Highly correlated
87 ZNF75A 25 94.0 Moderately correlated
88 ZNF30 24 94.0 Moderately correlated
89 ZNF41 24 99.0 Highly correlated
90 ZNF284 23 43.0 Weakly correlated
91 ZNF573 23 94.0 Moderately correlated
92 ZNF674 23 99.0 Highly correlated
93 ZNF677 23 99.0 Highly correlated
94 ZNF780A 23 43.0 Weakly correlated
95 ZNF12 22 99.0 Highly correlated
96 ZNF471 21 94.0 Moderately correlated
97 ZNF716 20 19.6 Weakly correlated
98 ZNF157 19 99.0 Highly correlated
99 ZNF808 19 19.6 Weakly correlated
100 ZNF93 19 8.6 Weakly correlated
101 ZNF343 18 74.0 Weakly correlated
102 ZNF483 18 99.0 Highly correlated
103 ZNF91 18 6.0 Weakly correlated
104 ZNF354C 17 99.0 Highly correlated
105 ZNF611 17 19.6 Weakly correlated
106 ZNF675 17 8.6 Weakly correlated
107 ZNF845 17 28.9 Weakly correlated
108 ZNF17 16 69.0 Weakly correlated
109 ZNF667 16 99.0 Highly correlated
110 ZNF136 15 74.0 Weakly correlated
111 ZNF586 14 43.0 Weakly correlated
112 ZFP14 13 99.0 Highly correlated
113 ZNF510 13 99.0 Highly correlated
114 ZNF605 13 99.0 Highly correlated
115 ZNF616 13 43.0 Weakly correlated
116 ZNF33A 12 99.0 Highly correlated
117 ZNF100 11 28.9 Weakly correlated
118 ZNF85 11 28.9 Weakly correlated
119 ZFP69 10 99.0 Highly correlated
120 ZNF114 10 28.9 Weakly correlated
121 ZNF433 10 43.0 Weakly correlated
122 ZNF440 10 28.9 Weakly correlated
123 ZNF789 10 99.0 Highly correlated
124 ZFP30 9 99.0 Highly correlated
125 ZNF337 9 43.0 Weakly correlated
126 ZNF350 9 99.0 Highly correlated
127 ZNF3 9 160.0 Weakly correlated
128 ZNF454 9 99.0 Highly correlated
129 ZNF727 9 19.6 Weakly correlated
130 ZNF730 9 19.6 Weakly correlated
131 ZNF248 8 99.0 Highly correlated
132 ZNF287 8 99.0 Highly correlated
133 ZNF445 8 99.0 Highly correlated
134 ZNF582 8 99.0 Highly correlated
135 ZNF736 8 43.0 Weakly correlated
136 ZNF777 8 319.0 Weakly correlated
137 ZKSCAN2 7 180.0 Weakly correlated
138 ZNF124 7 43.0 Weakly correlated
139 ZNF224 7 69.0 Weakly correlated
140 ZNF230 7 28.9 Weakly correlated
141 ZNF250 7 99.0 Highly correlated
142 ZNF267 7 43.0 Weakly correlated
143 ZNF530 7 28.9 Weakly correlated
144 ZNF222 6 43.0 Weakly correlated
145 ZNF333 6 99.0 Highly correlated
146 ZNF417 6 28.9 Weakly correlated
147 ZNF557 6 15.2 Weakly correlated
148 ZNF559 6 74.0 Weakly correlated
149 ZNF560 6 43.0 Weakly correlated
150 ZNF684 6 99.0 Highly correlated
151 ZNF878 6 43.0 Weakly correlated
152 ZNF879 6 99.0 Highly correlated
153 PRDM9 5 0.0 Weakly correlated
154 ZNF283 5 99.0 Highly correlated
155 ZNF480 5 43.0 Weakly correlated
156 ZNF562 5 28.9 Weakly correlated
157 ZNF565 5 99.0 Highly correlated
158 ZNF649 5 28.9 Weakly correlated
159 ZNF681 5 28.9 Weakly correlated
160 RBAK 4 99.0 Highly correlated
161 ZNF132 4 94.0 Moderately correlated
162 ZNF160 4 74.0 Weakly correlated
163 ZNF286A 4 160.0 Weakly correlated
164 ZNF304 4 99.0 Highly correlated
165 ZNF354A 4 99.0 Highly correlated
166 ZNF383 4 99.0 Highly correlated
167 ZNF418 4 43.0 Weakly correlated
168 ZNF460 4 74.0 Weakly correlated
169 ZNF544 4 0.0 Weakly correlated
170 ZNF567 4 99.0 Highly correlated
171 ZNF578 4 15.2 Weakly correlated
172 ZNF587 4 28.9 Weakly correlated
173 ZNF613 4 99.0 Highly correlated
174 ZNF749 4 28.9 Weakly correlated
175 ZNF135 3 94.0 Moderately correlated
176 ZNF184 3 99.0 Highly correlated
177 ZNF19 3 99.0 Highly correlated
178 ZNF214 3 99.0 Highly correlated
179 ZNF398 3 99.0 Highly correlated
180 ZNF420 3 94.0 Moderately correlated
181 ZNF431 3 28.9 Weakly correlated
182 ZNF461 3 99.0 Highly correlated
183 ZNF484 3 99.0 Highly correlated
184 ZNF57 3 28.9 Weakly correlated
185 ZNF596 3 94.0 Moderately correlated
186 ZNF700 3 28.9 Weakly correlated
187 ZNF77 3 87.0 Moderately correlated
188 ZNF780B 3 74.0 Weakly correlated
189 ZNF81 3 99.0 Highly correlated
190 ZIK1 2 87.0 Moderately correlated
191 ZNF10 2 99.0 Highly correlated
192 ZNF180 2 99.0 Highly correlated
193 ZNF234 2 99.0 Highly correlated
194 ZNF302 2 43.0 Weakly correlated
195 ZNF439 2 8.6 Weakly correlated
196 ZNF442 2 43.0 Weakly correlated
197 ZNF470 2 99.0 Highly correlated
198 ZNF487 2 28.9 Weakly correlated
199 ZNF543 2 99.0 Highly correlated
200 ZNF561 2 43.0 Weakly correlated
201 ZNF566 2 99.0 Highly correlated
202 ZNF568 2 99.0 Highly correlated
203 ZNF571 2 99.0 Highly correlated
204 ZNF595 2 43.0 Weakly correlated
205 ZNF607 2 43.0 Weakly correlated
206 ZNF626 2 0.0 Weakly correlated
207 ZNF627 2 74.0 Weakly correlated
208 ZNF669 2 43.0 Weakly correlated
209 ZNF66 2 0.0 Weakly correlated
210 ZNF799 2 43.0 Weakly correlated
211 ZNF850 2 28.9 Weakly correlated
212 ZNF880 2 28.9 Weakly correlated
213 ZFP1 1 99.0 Highly correlated
214 ZFP82 1 99.0 Highly correlated
215 ZFP90 1 99.0 Highly correlated
216 ZKSCAN3 1 99.0 Highly correlated
217 ZKSCAN4 1 99.0 Highly correlated
218 ZNF177 1 94.0 Moderately correlated
219 ZNF181 1 94.0 Moderately correlated
220 ZNF20 1 43.0 Weakly correlated
221 ZNF211 1 94.0 Moderately correlated
222 ZNF223 1 43.0 Weakly correlated
223 ZNF225 1 74.0 Weakly correlated
224 ZNF253 1 19.6 Weakly correlated
225 ZNF254 1 43.0 Weakly correlated
226 ZNF256 1 74.0 Weakly correlated
227 ZNF25 1 99.0 Highly correlated
228 ZNF285 1 94.0 Moderately correlated
229 ZNF34 1 99.0 Highly correlated
230 ZNF37A 1 99.0 Highly correlated
231 ZNF419 1 28.9 Weakly correlated
232 ZNF426 1 87.0 Moderately correlated
233 ZNF430 1 19.6 Weakly correlated
234 ZNF432 1 99.0 Highly correlated
235 ZNF43 1 43.0 Weakly correlated
236 ZNF45 1 99.0 Highly correlated
237 ZNF514 1 94.0 Moderately correlated
238 ZNF527 1 99.0 Highly correlated
239 ZNF548 1 94.0 Moderately correlated
240 ZNF550 1 94.0 Moderately correlated
241 ZNF555 1 94.0 Moderately correlated
242 ZNF564 1 74.0 Weakly correlated
243 ZNF570 1 99.0 Highly correlated
244 ZNF614 1 99.0 Highly correlated
245 ZNF624 1 99.0 Highly correlated
246 ZNF658 1 99.0 Highly correlated
247 ZNF665 1 28.9 Weakly correlated
248 ZNF699 1 99.0 Highly correlated
249 ZNF705E 1 0.0 Weakly correlated
250 ZNF718 1 19.6 Weakly correlated
251 ZNF726 1 28.9 Weakly correlated
252 ZNF728 1 19.6 Weakly correlated
253 ZNF746 1 99.0 Highly correlated
254 ZNF747 1 43.0 Weakly correlated
255 ZNF761 1 19.6 Weakly correlated
256 ZNF772 1 94.0 Moderately correlated
257 ZNF7 1 99.0 Highly correlated
258 ZNF805 1 99.0 Highly correlated
259 ZNF813 1 28.9 Weakly correlated
260 ZNF829 1 99.0 Highly correlated
261 ZNF846 1 74.0 Weakly correlated
262 ZNF852 1 94.0 Moderately correlated
263 ZNF891 1 99.0 Highly correlated
KZFPs Motif in Repeats The motif of KZFPs found by the meme-chip appears in the repeats sequence. :
# KZFP name Record number KZFP age(Mya) Time correlation with Repeats
1 ZKSCAN1 1456 160.0 Weakly correlated
2 ZNF436 1139 180.0 Weakly correlated
3 ZNF263 536 180.0 Weakly correlated
4 ZKSCAN8 512 160.0 Weakly correlated
5 ZNF534 320 19.6 Weakly correlated
6 ZNF189 302 99.0 Highly correlated
7 ZNF479 206 6.4 Weakly correlated
8 ZNF680 165 28.9 Weakly correlated
9 ZNF257 162 0.0 Weakly correlated
10 ZIM3 146 87.0 Moderately correlated
11 ZNF701 119 28.9 Weakly correlated
12 ZNF679 110 28.9 Weakly correlated
13 ZNF723 109 15.2 Weakly correlated
14 ZNF101 108 43.0 Weakly correlated
15 ZNF382 97 99.0 Highly correlated
16 ZKSCAN5 78 160.0 Weakly correlated
17 ZNF793 77 99.0 Highly correlated
18 ZFP37 72 99.0 Highly correlated
19 ZNF75D 67 94.0 Moderately correlated
20 ZNF485 64 94.0 Moderately correlated
21 ZNF317 64 99.0 Highly correlated
22 ZNF2 63 99.0 Highly correlated
23 ZNF18 61 160.0 Weakly correlated
24 ZNF92 60 28.9 Weakly correlated
25 ZNF589 58 28.9 Weakly correlated
26 ZNF766 52 43.0 Weakly correlated
27 ZNF554 49 99.0 Highly correlated
28 ZNF705D 45 28.9 Weakly correlated
29 ZNF197 43 99.0 Highly correlated
30 ZNF705B 42 28.9 Weakly correlated
31 ZNF597 38 94.0 Moderately correlated
32 ZNF282 38 319.0 Weakly correlated
33 ZNF28 37 28.9 Weakly correlated
34 ZNF175 37 94.0 Moderately correlated
35 ZNF528 36 43.0 Weakly correlated
36 ZNF133 35 99.0 Highly correlated
37 ZNF506 35 28.9 Weakly correlated
38 ZNF584 35 99.0 Highly correlated
39 ZNF320 31 28.9 Weakly correlated
40 ZNF585A 29 99.0 Highly correlated
41 ZFP69B 24 99.0 Highly correlated
42 ZNF140 24 99.0 Highly correlated
43 ZNF792 24 94.0 Moderately correlated
44 ZNF468 23 28.9 Weakly correlated
45 ZNF610 23 28.9 Weakly correlated
46 ZNF671 22 94.0 Moderately correlated
47 ZNF735 22 28.9 Weakly correlated
48 ZNF347 21 43.0 Weakly correlated
49 ZFP57 20 87.0 Moderately correlated
50 ZNF549 16 87.0 Moderately correlated
51 ZNF490 16 43.0 Weakly correlated
52 ZNF324 16 99.0 Highly correlated
53 ZNF264 16 99.0 Highly correlated
54 ZNF141 15 43.0 Weakly correlated
55 ZNF816 15 28.9 Weakly correlated
56 ZNF429 15 28.9 Weakly correlated
57 ZNF331 14 94.0 Moderately correlated
58 ZNF558 14 99.0 Highly correlated
59 ZNF44 13 43.0 Weakly correlated
60 ZNF823 12 43.0 Weakly correlated
61 ZNF251 11 94.0 Moderately correlated
62 ZNF169 10 94.0 Moderately correlated
63 ZNF780A 10 43.0 Weakly correlated
64 ZNF585B 10 99.0 Highly correlated
65 ZNF674 10 99.0 Highly correlated
66 ZNF707 10 74.0 Weakly correlated
67 ZNF483 9 99.0 Highly correlated
68 ZNF573 9 94.0 Moderately correlated
69 ZNF677 9 99.0 Highly correlated
70 ZNF716 8 19.6 Weakly correlated
71 ZNF202 8 160.0 Weakly correlated
72 ZFP14 7 99.0 Highly correlated
73 ZNF394 7 99.0 Highly correlated
74 ZNF433 7 43.0 Weakly correlated
75 ZNF778 6 74.0 Weakly correlated
76 ZNF667 6 99.0 Highly correlated
77 ZFP28 5 99.0 Highly correlated
78 ZNF684 5 99.0 Highly correlated
79 ZNF440 5 28.9 Weakly correlated
80 ZNF417 5 28.9 Weakly correlated
81 ZNF519 5 19.6 Weakly correlated
82 ZNF695 5 28.9 Weakly correlated
83 PRDM9 4 0.0 Weakly correlated
84 ZNF471 4 94.0 Moderately correlated
85 ZNF587 4 28.9 Weakly correlated
86 ZNF334 4 99.0 Highly correlated
87 ZNF287 4 99.0 Highly correlated
88 ZNF682 4 28.9 Weakly correlated
89 ZNF273 4 28.9 Weakly correlated
90 ZNF547 4 74.0 Weakly correlated
91 ZNF8 4 99.0 Highly correlated
92 ZNF157 3 99.0 Highly correlated
93 ZNF248 3 99.0 Highly correlated
94 ZNF26 3 99.0 Highly correlated
95 ZNF675 3 8.6 Weakly correlated
96 ZNF75A 3 94.0 Moderately correlated
97 ZNF530 3 28.9 Weakly correlated
98 ZNF274 3 99.0 Highly correlated
99 ZNF33A 3 99.0 Highly correlated
100 ZNF486 3 8.6 Weakly correlated
101 ZNF786 3 99.0 Highly correlated
102 ZNF789 3 99.0 Highly correlated
103 ZNF41 3 99.0 Highly correlated
104 ZNF84 3 99.0 Highly correlated
105 ZIK1 2 87.0 Moderately correlated
106 ZNF100 2 28.9 Weakly correlated
107 ZNF10 2 99.0 Highly correlated
108 ZNF132 2 94.0 Moderately correlated
109 ZNF354C 2 99.0 Highly correlated
110 ZNF596 2 94.0 Moderately correlated
111 ZNF641 2 99.0 Highly correlated
112 ZNF736 2 43.0 Weakly correlated
113 ZNF425 2 94.0 Moderately correlated
114 ZNF480 2 43.0 Weakly correlated
115 ZNF484 2 99.0 Highly correlated
116 ZNF283 2 99.0 Highly correlated
117 ZNF343 2 74.0 Weakly correlated
118 ZNF350 2 99.0 Highly correlated
119 ZNF605 2 99.0 Highly correlated
120 ZNF17 2 69.0 Weakly correlated
121 ZNF441 2 43.0 Weakly correlated
122 ZNF85 2 28.9 Weakly correlated
123 ZFP69 1 99.0 Highly correlated
124 ZNF136 1 74.0 Weakly correlated
125 ZNF114 1 28.9 Weakly correlated
126 ZNF81 1 99.0 Highly correlated
127 ZNF445 1 99.0 Highly correlated
128 ZNF470 1 99.0 Highly correlated
129 ZNF565 1 99.0 Highly correlated
130 ZNF700 1 28.9 Weakly correlated
131 ZNF749 1 28.9 Weakly correlated
132 ZNF560 1 43.0 Weakly correlated
133 ZNF607 1 43.0 Weakly correlated
134 ZNF304 1 99.0 Highly correlated
135 ZNF430 1 19.6 Weakly correlated
136 ZNF454 1 99.0 Highly correlated
137 ZNF616 1 43.0 Weakly correlated
138 ZNF880 1 28.9 Weakly correlated
139 ZNF254 1 43.0 Weakly correlated
140 ZNF777 1 319.0 Weakly correlated
141 ZNF30 1 94.0 Moderately correlated
142 ZNF333 1 99.0 Highly correlated
143 ZNF420 1 94.0 Moderately correlated
144 ZNF611 1 19.6 Weakly correlated
145 ZNF730 1 19.6 Weakly correlated
146 ZNF93 1 8.6 Weakly correlated
147 ZNF267 1 43.0 Weakly correlated
148 ZNF302 1 43.0 Weakly correlated
149 ZNF337 1 43.0 Weakly correlated
150 ZNF354A 1 99.0 Highly correlated
151 ZNF563 1 28.9 Weakly correlated
152 ZNF91 1 6.0 Weakly correlated
KZFPs Motif in Repeats Consensus The motif of KZFPs found by the meme-chip can find the corresponding region on the consensus sequence of repeats. :
# KZFP name KZFP age(Mya) Time correlation with Repeats
1 ZFP69B 99.0 Highly correlated
2 ZKSCAN1 160.0 Weakly correlated
3 ZKSCAN8 160.0 Weakly correlated
4 ZNF175 94.0 Moderately correlated
5 ZNF18 160.0 Weakly correlated
6 ZNF257 0.0 Weakly correlated
7 ZNF282 319.0 Weakly correlated
8 ZNF2 99.0 Highly correlated
9 ZNF347 43.0 Weakly correlated
10 ZNF436 180.0 Weakly correlated
11 ZNF558 99.0 Highly correlated
12 ZNF671 94.0 Moderately correlated
13 ZNF679 28.9 Weakly correlated
14 ZNF701 28.9 Weakly correlated
15 ZNF75D 94.0 Moderately correlated
16 ZNF823 43.0 Weakly correlated