ZRdb KZFP & Repeats
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Human_ZNF136

  • Protein
    Zinc finger protein 136
  • Length
    540
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    94.0 Mya
  • Time of Changing in binding specificity
    74.0 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MDSVAFEDVDVNFTQEEWALLDPSQKNLYRDVMWETMRNLASIGKKWKDQNIKDHYKHRGRNLRSHMLERLYQTKDGSQRGGIFSQFANQNLSKKIPGVKLCESIVYGEVSMGQSSLNRHIKDHSGHEPKEYQEYGEKPDTRNQCWKPFSSHHSFRTHEIIHTGEKLYDCKECGKTFFSLKRIRRHIITHSGYTPYKCKVCGKAFDYPSRFRTHERSHTGEKPYECQECGKAFTCITSVRRHMIKHTGDGPYKCKVCGKPFHSLSSFQVHERIHTGEKPFKCKQCGKAFSCSPTLRIHERTHTGEKPYECKQCGKAFSYLPSLRLHERIHTGEKPFVCKQCGKAFRSASTFQIHERTHTGEKPYECKECGEAFSCIPSMRRHMIKHTGEGPYKCKVCGKPFHSLSPFRIHERTHTGEKPYVCKHCGKAFVSSTSIRIHERTHTGEKPYECKQCGKAFSYLNSFRTHEMIHTGEKPFECKRCGKAFRSSSSFRLHERTHTGQKPYHCKECGKAYSCRASFQRHMLTHAEDGPPYKCMWESL
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
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# Domain name Pos
1 KRAB 4..90
2 dec2h2 140..162
3 C2h2 168..190
4 C2h2 196..218
5 C2h2 224..246
6 C2h2 252..274
7 C2h2 280..302
8 C2h2 308..330
9 C2h2 336..358
10 C2h2 364..386
11 C2h2 392..414
12 C2h2 420..442
13 C2h2 448..470
14 C2h2 476..498
15 C2h2 504..526
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process negative regulation of transcription by RNA polymerase II
6 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1M2 301 **** 99.0 Weakly correlated
2 L1M4 277 **** 99.0 Weakly correlated
3 L1MEc 234 **** 99.0 Weakly correlated
4 L1PB1 234 **** 74.0 Highly correlated
5 L1MEf 223 **** 99.0 Weakly correlated
6 L1M1 210 **** 74.0 Highly correlated
7 L1MA4 176 **** 87.0 Moderately correlated
8 L1MDa 165 **** 99.0 Weakly correlated
9 L1MA4A 149 **** 87.0 Moderately correlated
10 L1M4c 148 **** 99.0 Weakly correlated
11 L1PA3 147 **** 19.6 Weakly correlated
12 L1MEg 125 **** 99.0 Weakly correlated
13 L1M4b 123 **** 99.0 Weakly correlated
14 L1PA4 116 **** 19.6 Weakly correlated
15 L1PA7 113 **** 74.0 Highly correlated
16 L1PA5 109 **** 19.6 Weakly correlated
17 L1PBa 109 **** 74.0 Highly correlated
18 L1MA9 108 **** 99.0 Weakly correlated
19 L1MB7 104 **** 99.0 Weakly correlated
20 HAL1 102 **** 99.0 Weakly correlated
21 L1PA6 90 **** 28.9 Weakly correlated
22 L1ME1 86 **** 99.0 Weakly correlated
23 L1MEd 85 **** 99.0 Weakly correlated
24 L1MA5 80 **** 87.0 Moderately correlated
25 L1MA8 79 **** 87.0 Moderately correlated
26 L1M3f 78 **** 87.0 Moderately correlated
27 L1PA2 75 **** 15.2 Weakly correlated
28 L1MCa 74 **** 99.0 Weakly correlated
29 AluY 73 n.s 74.0 Highly correlated
30 L1MA6 65 **** 87.0 Moderately correlated
31 L1MA7 62 **** 87.0 Moderately correlated
32 AluSx1 56 n.s 74.0 Highly correlated
33 AluSz 53 n.s 74.0 Highly correlated
34 L1M4a2 51 **** 99.0 Weakly correlated
35 AluSx 50 n.s 74.0 Highly correlated
36 L1MB8 50 **** 99.0 Weakly correlated
37 L1MB1 49 **** 99.0 Weakly correlated
38 L1PB2 48 **** 74.0 Highly correlated
39 L1PB3 48 **** 74.0 Highly correlated
40 L1M4a1 47 **** 99.0 Weakly correlated
41 L1MB3 47 **** 99.0 Weakly correlated
42 L1MD1 46 **** 99.0 Weakly correlated
43 L1PA15 44 **** 74.0 Highly correlated
44 AluJb 43 n.s 74.0 Highly correlated
45 L1M2a 42 **** 87.0 Moderately correlated
46 AluJr 38 n.s 74.0 Highly correlated
47 L1MB5 37 **** 99.0 Weakly correlated
48 L1PA10 36 **** 74.0 Highly correlated
49 L1MA5A 35 **** 87.0 Moderately correlated
50 L1MB2 32 **** 99.0 Weakly correlated
51 L1MD2 30 **** 99.0 Weakly correlated
52 L1PA13 30 *** 74.0 Highly correlated
53 AluJo 27 n.s 74.0 Highly correlated
54 AluSz6 27 n.s 74.0 Highly correlated
55 L1M3e 27 **** 99.0 Weakly correlated
56 L1PA8 27 ** 74.0 Highly correlated
57 L1PB4 27 **** 99.0 Weakly correlated
58 L1M2c 26 **** 87.0 Moderately correlated
59 L1MB4 26 **** 99.0 Weakly correlated
60 L1P2 26 **** 28.9 Weakly correlated
61 AluSp 24 n.s 74.0 Highly correlated
62 L1MA3 24 n.s 74.0 Highly correlated
63 L1MC1 24 * 99.0 Weakly correlated
64 L1M3de 23 **** 99.0 Weakly correlated
65 L1PA14 23 **** 74.0 Highly correlated
66 L1M3b 22 **** 99.0 Weakly correlated
67 L1ME2 22 ** 99.0 Weakly correlated
68 L1ME3A 22 ** 99.0 Weakly correlated
69 L1M3c 21 **** 99.0 Weakly correlated
70 L1PREC2 21 * 43.0 Weakly correlated
71 AluSq2 20 n.s 74.0 Highly correlated
72 L1P3 20 **** 74.0 Highly correlated
73 L1PA11 20 *** 74.0 Highly correlated
74 L2a 20 n.s 99.0 Weakly correlated
75 L1MEi 18 **** 99.0 Weakly correlated
76 L1PA8A 18 *** 74.0 Highly correlated
77 L1PBa1 18 **** 74.0 Highly correlated
78 AluSx3 17 n.s 74.0 Highly correlated
79 AluSg 15 n.s 74.0 Highly correlated
80 L1MA10 15 **** 99.0 Weakly correlated
81 L1MCc 15 **** 99.0 Weakly correlated
82 L1ME3 15 ** 99.0 Weakly correlated
83 L2b 15 n.s 99.0 Weakly correlated
84 MIRb 15 n.s 99.0 Weakly correlated
85 AluSc8 14 n.s 74.0 Highly correlated
86 L1P1 14 ** 19.6 Weakly correlated
87 AluSc 13 n.s 74.0 Highly correlated
88 L1PA16 13 n.s 74.0 Highly correlated
89 L1PBb 13 **** 74.0 Highly correlated
90 L1MC4 12 n.s 99.0 Weakly correlated
91 L1ME3Cz 12 n.s 99.0 Weakly correlated
92 L1ME4a 12 n.s 99.0 Weakly correlated
93 L2c 12 n.s 99.0 Weakly correlated
94 FLAM_C 11 * 74.0 Highly correlated
95 L1MCb 11 **** 99.0 Weakly correlated
96 L1ME3B 11 * 99.0 Weakly correlated
97 AluJr4 10 n.s 74.0 Highly correlated
98 AluSq 10 n.s 74.0 Highly correlated
99 FLAM_A 10 ** 74.0 Highly correlated
100 FRAM 10 **** 74.0 Highly correlated
101 HAL1M8 10 **** 99.0 Weakly correlated
102 L1HS 10 n.s 8.6 Weakly correlated
103 L1MC3 10 n.s 99.0 Weakly correlated
104 L1M3d 9 **** 99.0 Weakly correlated
105 L1MC5a 9 n.s 99.0 Weakly correlated
106 L1ME2z 9 * 99.0 Weakly correlated
107 L1ME3F 9 ** 99.0 Weakly correlated
108 L1ME3G 9 n.s 99.0 Weakly correlated
109 HAL1ME 8 * 99.0 Weakly correlated
110 L1MC2 8 n.s 99.0 Weakly correlated
111 SVA_D 8 * 15.2 Weakly correlated
112 L1MA2 7 n.s 74.0 Highly correlated
113 L1MC4a 7 n.s 99.0 Weakly correlated
114 L1MD3 7 * 99.0 Weakly correlated
115 L1PA15-16 7 * 74.0 Highly correlated
116 L1PA17 7 n.s 74.0 Highly correlated
117 L3 7 n.s 99.0 Weakly correlated
118 AluSx4 6 n.s 74.0 Highly correlated
119 HAL1b 6 * 99.0 Weakly correlated
120 L1M3a 6 **** 99.0 Weakly correlated
121 L1M6 6 n.s 99.0 Weakly correlated
122 L1MC5 6 n.s 99.0 Weakly correlated
123 MIR 6 n.s 99.0 Weakly correlated
124 AluYa5 5 * 15.2 Weakly correlated
125 AluYm1 5 n.s 19.6 Weakly correlated
126 L1M3 5 n.s 99.0 Weakly correlated
127 L1MA1 5 n.s 74.0 Highly correlated
128 L1ME3E 5 n.s 99.0 Weakly correlated
129 L1ME4b 5 n.s 99.0 Weakly correlated
130 L1MEj 5 ** 99.0 Weakly correlated
131 MLT1D 5 n.s 99.0 Weakly correlated
132 AluSg4 4 n.s 74.0 Highly correlated
133 L1M2a1 4 **** 79.0 Moderately correlated
134 L1M2b 4 **** 87.0 Moderately correlated
135 LTR12C 4 n.s 19.6 Weakly correlated
136 MER11A 4 * 28.9 Weakly correlated
137 MIR3 4 n.s 99.0 Weakly correlated
138 MIRc 4 n.s 99.0 Weakly correlated
139 MLT1A1 4 n.s 87.0 Moderately correlated
140 MSTA 4 n.s 43.0 Weakly correlated
141 MSTD 4 n.s 74.0 Highly correlated
142 SVA_F 4 * 0.0 Weakly correlated
143 THE1B 4 n.s 43.0 Weakly correlated
144 THE1D 4 n.s 43.0 Weakly correlated
145 AluSg7 3 n.s 74.0 Highly correlated
146 AluYb8 3 n.s 15.2 Weakly correlated
147 AluYj4 3 n.s 0.0 Weakly correlated
148 FAM 3 n.s 87.0 Moderately correlated
149 L1M5 3 n.s 99.0 Weakly correlated
150 L1ME4c 3 n.s 99.0 Weakly correlated
151 L1MEb 3 n.s 99.0 Weakly correlated
152 L1P4a 3 n.s 74.0 Highly correlated
153 L1PB 3 n.s 74.0 Highly correlated
154 L2 3 n.s 99.0 Weakly correlated
155 LTR10A 3 *** 28.9 Weakly correlated
156 LTR18A 3 **** 43.0 Weakly correlated
157 MER50 3 n.s 43.0 Weakly correlated
158 MLT1A0 3 n.s 99.0 Weakly correlated
159 MLT1B 3 n.s 99.0 Weakly correlated
160 MLT1C 3 n.s 94.0 Weakly correlated
161 MLT1F 3 n.s 99.0 Weakly correlated
162 MLT1J2 3 n.s 99.0 Weakly correlated
163 MLT1L 3 n.s 99.0 Weakly correlated
164 MSTB 3 n.s 43.0 Weakly correlated
165 SVA_A 3 * 19.6 Weakly correlated
166 SVA_C 3 * 15.2 Weakly correlated
167 AluSq4 2 n.s 74.0 Highly correlated
168 AluYc 2 n.s 74.0 Highly correlated
169 ERVL-B4-int 2 n.s 99.0 Weakly correlated
170 ERVL-E-int 2 n.s 99.0 Weakly correlated
171 Harlequin-int 2 n.s 74.0 Highly correlated
172 L1M8 2 n.s 99.0 Weakly correlated
173 L1MC 2 n.s 99.0 Weakly correlated
174 L1MDb 2 n.s 99.0 Weakly correlated
175 L1ME3D 2 n.s 99.0 Weakly correlated
176 L1P4 2 n.s 74.0 Highly correlated
177 L1P4e 2 ** 74.0 Highly correlated
178 L1PA12 2 n.s 74.0 Highly correlated
179 LTR10C 2 * 28.9 Weakly correlated
180 LTR16 2 n.s 99.0 Weakly correlated
181 LTR16A 2 n.s 99.0 Weakly correlated
182 LTR7 2 n.s 19.6 Weakly correlated
183 MER11B 2 n.s 19.6 Weakly correlated
184 MER4A1 2 n.s 74.0 Highly correlated
185 MER4D 2 n.s 74.0 Highly correlated
186 MER57-int 2 n.s 87.0 Moderately correlated
187 MER61B 2 ** 43.0 Weakly correlated
188 MER9a3 2 * 28.9 Weakly correlated
189 MLT1E2 2 n.s 99.0 Weakly correlated
190 MLT1F2 2 n.s 99.0 Weakly correlated
191 MLT1J 2 n.s 99.0 Weakly correlated
192 MLT1J1 2 n.s 99.0 Weakly correlated
193 MLT1O 2 n.s 99.0 Weakly correlated
194 MSTB1 2 n.s 74.0 Highly correlated
195 MamRTE1 2 n.s 99.0 Weakly correlated
196 MamRep605 2 n.s 99.0 Weakly correlated
197 THE1C 2 n.s 43.0 Weakly correlated
198 AluSc5 1 n.s 74.0 Highly correlated
199 AluYd8 1 ** 15.2 Weakly correlated
200 AluYe6 1 ** 74.0 Highly correlated
201 AluYh3 1 n.s 15.2 Weakly correlated
202 AluYk3 1 n.s 19.6 Weakly correlated
203 AluYk4 1 n.s 15.2 Weakly correlated
204 HERV9-int 1 n.s 28.9 Weakly correlated
205 HERVH-int 1 n.s 28.9 Weakly correlated
206 L1M7 1 n.s 99.0 Weakly correlated
207 L1MD 1 n.s 99.0 Weakly correlated
208 L1ME5 1 n.s 99.0 Weakly correlated
209 L1MEg2 1 n.s 99.0 Weakly correlated
210 L1MEh 1 n.s 99.0 Weakly correlated
211 L1P5 1 * 74.0 Highly correlated
212 L4_A_Mam 1 n.s 99.0 Weakly correlated
213 L4_C_Mam 1 n.s 99.0 Weakly correlated
214 LTR101_Mam 1 n.s 99.0 Weakly correlated
215 LTR103b_Mam 1 * 99.0 Weakly correlated
216 LTR13 1 n.s 19.6 Weakly correlated
217 LTR13A 1 n.s 28.9 Weakly correlated
218 LTR14B 1 n.s 28.9 Weakly correlated
219 LTR17 1 n.s 28.9 Weakly correlated
220 LTR27D 1 * 43.0 Weakly correlated
221 LTR2B 1 * 19.6 Weakly correlated
222 LTR31 1 * 74.0 Highly correlated
223 LTR32 1 n.s 43.0 Weakly correlated
224 LTR33 1 n.s 99.0 Weakly correlated
225 LTR33A 1 n.s 99.0 Weakly correlated
226 LTR37-int 1 n.s 99.0 Weakly correlated
227 LTR40c 1 n.s 99.0 Weakly correlated
228 LTR49-int 1 n.s 74.0 Highly correlated
229 LTR55 1 * 99.0 Weakly correlated
230 LTR80A 1 * 99.0 Weakly correlated
231 LTR81A 1 n.s 99.0 Weakly correlated
232 LTR84a 1 * 99.0 Weakly correlated
233 LTR9D 1 n.s 43.0 Weakly correlated
234 MER101-int 1 n.s 74.0 Highly correlated
235 MER34B 1 n.s 87.0 Moderately correlated
236 MER39 1 n.s 74.0 Highly correlated
237 MER39B 1 n.s 74.0 Highly correlated
238 MER41B 1 n.s 74.0 Highly correlated
239 MER4A 1 n.s 74.0 Highly correlated
240 MER4B-int 1 n.s 99.0 Weakly correlated
241 MER4CL34 1 n.s 43.0 Weakly correlated
242 MER50-int 1 n.s 43.0 Weakly correlated
243 MER57F 1 * 74.0 Highly correlated
244 MER65A 1 n.s 74.0 Highly correlated
245 MER70B 1 n.s 87.0 Moderately correlated
246 MER70C 1 * 99.0 Weakly correlated
247 MER74A 1 n.s 99.0 Weakly correlated
248 MER77 1 n.s 99.0 Weakly correlated
249 MER89 1 n.s 99.0 Weakly correlated
250 MLT1A1-int 1 n.s 87.0 Moderately correlated
251 MLT1F1 1 n.s 99.0 Weakly correlated
252 MLT1G1 1 n.s 99.0 Weakly correlated
253 MLT1H 1 n.s 99.0 Weakly correlated
254 MLT1H2 1 n.s 99.0 Weakly correlated
255 MLT1I 1 n.s 99.0 Weakly correlated
256 MLT1N2 1 n.s 99.0 Weakly correlated
257 MLT2B2 1 n.s 99.0 Weakly correlated
258 MLT2B3 1 n.s 99.0 Weakly correlated
259 MLT2D 1 n.s 99.0 Weakly correlated
260 MSTA-int 1 n.s 43.0 Weakly correlated
261 MSTA1 1 * 74.0 Highly correlated
262 MamGyp-int 1 n.s 99.0 Weakly correlated
263 SVA_B 1 n.s 15.2 Weakly correlated
264 THE1A 1 n.s 43.0 Weakly correlated
265 THE1D-int 1 n.s 28.9 Weakly correlated
266 X9_LINE 1 ** 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1M2 239 **** 99.0 Weakly correlated
2 L1M4 223 **** 99.0 Weakly correlated
3 L1PB1 208 **** 74.0 Highly correlated
4 L1MEf 181 **** 99.0 Weakly correlated
5 L1MEc 180 **** 99.0 Weakly correlated
6 L1M1 168 **** 74.0 Highly correlated
7 L1MA4 140 **** 87.0 Moderately correlated
8 L1MDa 134 **** 99.0 Weakly correlated
9 L1M4c 124 **** 99.0 Weakly correlated
10 L1MA4A 118 **** 87.0 Moderately correlated
11 L1M4b 101 **** 99.0 Weakly correlated
12 L1PBa 101 **** 74.0 Highly correlated
13 L1MEg 97 **** 99.0 Weakly correlated
14 L1PA7 90 **** 74.0 Highly correlated
15 L1MA9 88 **** 99.0 Weakly correlated
16 HAL1 77 **** 99.0 Weakly correlated
17 L1MB7 72 **** 99.0 Weakly correlated
18 L1MA8 64 **** 87.0 Moderately correlated
19 L1ME1 63 **** 99.0 Weakly correlated
20 L1MEd 62 **** 99.0 Weakly correlated
21 L1M3f 60 **** 87.0 Moderately correlated
22 L1MA5 60 **** 87.0 Moderately correlated
23 L1PA6 58 **** 28.9 Weakly correlated
24 L1MCa 57 **** 99.0 Weakly correlated
25 L1MA7 52 **** 87.0 Moderately correlated
26 L1MA6 50 **** 87.0 Moderately correlated
27 L1PA3 43 n.s 19.6 Weakly correlated
28 L1MB1 42 **** 99.0 Weakly correlated
29 L1MD1 42 **** 99.0 Weakly correlated
30 L1PB2 42 **** 74.0 Highly correlated
31 L1PB3 42 **** 74.0 Highly correlated
32 L1M4a2 39 **** 99.0 Weakly correlated
33 L1MB3 39 **** 99.0 Weakly correlated
34 L1PA15 39 **** 74.0 Highly correlated
35 L1MB8 38 **** 99.0 Weakly correlated
36 L1PA5 38 n.s 19.6 Weakly correlated
37 L1M4a1 36 **** 99.0 Weakly correlated
38 L1PA4 36 n.s 19.6 Weakly correlated
39 L1MA5A 32 **** 87.0 Moderately correlated
40 L1PA10 31 **** 74.0 Highly correlated
41 L1M2a 29 **** 87.0 Moderately correlated
42 L1MB5 26 **** 99.0 Weakly correlated
43 L1M3e 24 **** 99.0 Weakly correlated
44 L1MB2 24 **** 99.0 Weakly correlated
45 L1PA13 23 * 74.0 Highly correlated
46 L1PA2 22 n.s 15.2 Weakly correlated
47 L1PB4 21 *** 99.0 Weakly correlated
48 L1M2c 20 **** 87.0 Moderately correlated
49 L1MB4 20 **** 99.0 Weakly correlated
50 L1PA8 20 n.s 74.0 Highly correlated
51 L1M3b 19 **** 99.0 Weakly correlated
52 L1M3c 19 **** 99.0 Weakly correlated
53 L1MD2 19 ** 99.0 Weakly correlated
54 L1P2 19 **** 28.9 Weakly correlated
55 L1PA14 18 **** 74.0 Highly correlated
56 L1M3de 16 **** 99.0 Weakly correlated
57 L1MA3 16 n.s 74.0 Highly correlated
58 L1PA11 16 ** 74.0 Highly correlated
59 L1PBa1 16 **** 74.0 Highly correlated
60 L1PREC2 16 n.s 43.0 Weakly correlated
61 L1MEi 15 **** 99.0 Weakly correlated
62 L1PA8A 15 ** 74.0 Highly correlated
63 L1MC1 14 n.s 99.0 Weakly correlated
64 L1ME3 14 ** 99.0 Weakly correlated
65 L1ME3A 13 n.s 99.0 Weakly correlated
66 L1P3 13 ** 74.0 Highly correlated
67 L1MA10 12 *** 99.0 Weakly correlated
68 L1PBb 12 **** 74.0 Highly correlated
69 L1MCc 11 **** 99.0 Weakly correlated
70 L1ME2 10 n.s 99.0 Weakly correlated
71 L1ME3Cz 9 n.s 99.0 Weakly correlated
72 L1PA16 9 n.s 74.0 Highly correlated
73 L1MC2 8 n.s 99.0 Weakly correlated
74 L1P1 8 n.s 19.6 Weakly correlated
75 L1M3d 7 **** 99.0 Weakly correlated
76 L1ME3G 7 n.s 99.0 Weakly correlated
77 L1PA15-16 7 * 74.0 Highly correlated
78 HAL1M8 6 ** 99.0 Weakly correlated
79 L1HS 6 n.s 8.6 Weakly correlated
80 L1M3a 6 **** 99.0 Weakly correlated
81 L1MC3 6 n.s 99.0 Weakly correlated
82 L1MC4 6 n.s 99.0 Weakly correlated
83 L1MCb 6 * 99.0 Weakly correlated
84 L1ME2z 6 n.s 99.0 Weakly correlated
85 L1ME3B 6 n.s 99.0 Weakly correlated
86 L1ME3F 6 n.s 99.0 Weakly correlated
87 L1ME4a 6 n.s 99.0 Weakly correlated
88 HAL1ME 5 n.s 99.0 Weakly correlated
89 L1MA1 5 n.s 74.0 Highly correlated
90 L1PA17 5 n.s 74.0 Highly correlated
91 AluSz6 4 n.s 74.0 Highly correlated
92 L1M2a1 4 **** 79.0 Moderately correlated
93 L2a 4 n.s 99.0 Weakly correlated
94 AluJr 3 n.s 74.0 Highly correlated
95 AluSz 3 n.s 74.0 Highly correlated
96 HAL1b 3 n.s 99.0 Weakly correlated
97 L1M6 3 n.s 99.0 Weakly correlated
98 L1MC5a 3 n.s 99.0 Weakly correlated
99 L1ME3E 3 n.s 99.0 Weakly correlated
100 L1ME4b 3 n.s 99.0 Weakly correlated
101 L1MEj 3 n.s 99.0 Weakly correlated
102 L2c 3 n.s 99.0 Weakly correlated
103 AluSq 2 n.s 74.0 Highly correlated
104 AluSx 2 n.s 74.0 Highly correlated
105 AluSx3 2 n.s 74.0 Highly correlated
106 AluY 2 n.s 74.0 Highly correlated
107 L1M2b 2 ** 87.0 Moderately correlated
108 L1M8 2 n.s 99.0 Weakly correlated
109 L1MA2 2 n.s 74.0 Highly correlated
110 L1MC5 2 n.s 99.0 Weakly correlated
111 L1MDb 2 n.s 99.0 Weakly correlated
112 L1ME4c 2 n.s 99.0 Weakly correlated
113 L1MEb 2 n.s 99.0 Weakly correlated
114 L1P4a 2 n.s 74.0 Highly correlated
115 L1P4e 2 ** 74.0 Highly correlated
116 L1PA12 2 n.s 74.0 Highly correlated
117 L2 2 n.s 99.0 Weakly correlated
118 MIR 2 n.s 99.0 Weakly correlated
119 MIRb 2 n.s 99.0 Weakly correlated
120 MamRep605 2 n.s 99.0 Weakly correlated
121 AluJb 1 n.s 74.0 Highly correlated
122 AluJr4 1 n.s 74.0 Highly correlated
123 AluSc8 1 n.s 74.0 Highly correlated
124 AluSg 1 n.s 74.0 Highly correlated
125 AluSq2 1 n.s 74.0 Highly correlated
126 AluSx1 1 n.s 74.0 Highly correlated
127 AluYc 1 n.s 74.0 Highly correlated
128 HERV9-int 1 n.s 28.9 Weakly correlated
129 L1M5 1 n.s 99.0 Weakly correlated
130 L1M7 1 n.s 99.0 Weakly correlated
131 L1MC4a 1 n.s 99.0 Weakly correlated
132 L1MD3 1 n.s 99.0 Weakly correlated
133 L1ME3D 1 n.s 99.0 Weakly correlated
134 L1MEg2 1 n.s 99.0 Weakly correlated
135 L2b 1 n.s 99.0 Weakly correlated
136 L4_C_Mam 1 n.s 99.0 Weakly correlated
137 LTR27D 1 * 43.0 Weakly correlated
138 LTR40c 1 n.s 99.0 Weakly correlated
139 LTR81A 1 n.s 99.0 Weakly correlated
140 LTR9D 1 n.s 43.0 Weakly correlated
141 MER57-int 1 n.s 87.0 Moderately correlated
142 MER89 1 n.s 99.0 Weakly correlated
143 MLT1A0 1 n.s 99.0 Weakly correlated
144 MLT1D 1 n.s 99.0 Weakly correlated
145 MLT1F 1 n.s 99.0 Weakly correlated
146 MLT1F1 1 n.s 99.0 Weakly correlated
147 MLT1J1 1 n.s 99.0 Weakly correlated
148 MLT1J2 1 n.s 99.0 Weakly correlated
149 MLT1N2 1 n.s 99.0 Weakly correlated
150 MLT1O 1 n.s 99.0 Weakly correlated
151 MSTB 1 n.s 43.0 Weakly correlated
152 MSTD 1 n.s 74.0 Highly correlated
153 SVA_A 1 n.s 19.6 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 HAL1 99.0 Weakly correlated
2 HAL1M8 99.0 Weakly correlated
3 L1M2 99.0 Weakly correlated
4 L1M4 99.0 Weakly correlated
5 L1M4A1 99.0 Weakly correlated
6 L1M4A2 99.0 Weakly correlated
7 L1M4B 99.0 Weakly correlated
8 L1M4C 99.0 Weakly correlated
9 L1MA3 74.0 Highly correlated
10 L1MC4 99.0 Weakly correlated
11 L1MCA 99.0 Weakly correlated
12 L1MDA 99.0 Weakly correlated
13 L1ME2Z 99.0 Weakly correlated
14 L1MEC 99.0 Weakly correlated
15 L1MED 99.0 Weakly correlated
16 L1MEF 99.0 Weakly correlated
17 L1MEG 99.0 Weakly correlated
18 L1MEI 99.0 Weakly correlated
19 L1P1 19.6 Weakly correlated
20 L1P2 28.9 Weakly correlated
21 L1PA15-16 74.0 Highly correlated
22 L1PBA 74.0 Highly correlated