ZRdb KZFP & Repeats
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SINE_ALUSX

  • Name
    ALUSX
  • Repbase
    AluSx
  • Type
    SINE
  • Emergence
    74.0 Mya
  • Dfam Id
    DF0000047
Description :

Alu elements derive from a pair of internally-deleted 7SL RNA monomersthat are joined by an A-rich linker.
Consensus sequence The consensus sequences obtained from Dfam are derived from the seed alignment using a specialized caller. :
ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggcgcgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
Repeats structure For certain families, there exists a curated collection of TE-derived proteins, which constitutes a non-redundant set. As a results, several families may lack an associated coding sequences directly linked to them. The annotation for these families is obtained from Dfam. :
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequence on the genome. :
# KZFP name Record number KZFP age(Mya) Time correlation with Repeats
1 ZNF394 3318 99.0 Weakly correlated
2 ZNF382 3265 99.0 Weakly correlated
3 ZNF2 1797 99.0 Weakly correlated
4 ZNF284 1431 43.0 Weakly correlated
5 ZFP37 1257 99.0 Weakly correlated
6 ZNF441 1223 43.0 Weakly correlated
7 ZNF18 1035 160.0 Weakly correlated
8 ZNF101 951 43.0 Weakly correlated
9 ZFP69B 910 99.0 Weakly correlated
10 ZNF766 891 43.0 Weakly correlated
11 ZNF324 831 99.0 Weakly correlated
12 ZNF680 767 28.9 Weakly correlated
13 ZNF558 734 99.0 Weakly correlated
14 ZNF519 717 19.6 Weakly correlated
15 ZNF705B 637 28.9 Weakly correlated
16 ZNF257 613 0.0 Weakly correlated
17 ZNF610 577 28.9 Weakly correlated
18 ZKSCAN1 482 160.0 Weakly correlated
19 ZNF182 460 99.0 Weakly correlated
20 ZNF792 444 94.0 Weakly correlated
21 ZNF263 441 180.0 Weakly correlated
22 ZNF140 436 99.0 Weakly correlated
23 ZNF534 406 19.6 Weakly correlated
24 ZNF589 404 28.9 Weakly correlated
25 ZIM3 396 87.0 Weakly correlated
26 ZNF506 374 28.9 Weakly correlated
27 ZNF175 360 94.0 Weakly correlated
28 ZNF317 353 99.0 Weakly correlated
29 ZNF705D 347 28.9 Weakly correlated
30 ZNF251 303 94.0 Weakly correlated
31 ZNF429 265 28.9 Weakly correlated
32 ZKSCAN8 253 160.0 Weakly correlated
33 ZNF479 247 6.4 Weakly correlated
34 ZNF202 227 160.0 Weakly correlated
35 ZNF679 224 28.9 Weakly correlated
36 ZNF547 223 74.0 Highly correlated
37 ZNF585B 223 99.0 Weakly correlated
38 ZNF8 215 99.0 Weakly correlated
39 ZNF584 210 99.0 Weakly correlated
40 ZNF197 194 99.0 Weakly correlated
41 ZNF723 189 15.2 Weakly correlated
42 ZFP57 188 87.0 Weakly correlated
43 ZNF707 188 74.0 Highly correlated
44 ZNF641 186 99.0 Weakly correlated
45 ZNF92 182 28.9 Weakly correlated
46 ZNF460 180 74.0 Highly correlated
47 ZNF264 171 99.0 Weakly correlated
48 ZNF554 165 99.0 Weakly correlated
49 ZNF597 152 94.0 Weakly correlated
50 ZNF486 135 8.6 Weakly correlated
51 ZNF695 134 28.9 Weakly correlated
52 ZNF793 128 99.0 Weakly correlated
53 ZNF701 120 28.9 Weakly correlated
54 ZNF75D 120 94.0 Weakly correlated
55 ZNF28 118 28.9 Weakly correlated
56 ZNF274 110 99.0 Weakly correlated
57 ZNF528 96 43.0 Weakly correlated
58 ZNF490 91 43.0 Weakly correlated
59 ZNF485 89 94.0 Weakly correlated
60 ZNF585A 89 99.0 Weakly correlated
61 ZNF287 83 99.0 Weakly correlated
62 ZNF320 81 28.9 Weakly correlated
63 ZNF84 77 99.0 Weakly correlated
64 ZNF334 76 99.0 Weakly correlated
65 ZNF786 68 99.0 Weakly correlated
66 ZNF778 63 74.0 Highly correlated
67 ZKSCAN5 60 160.0 Weakly correlated
68 ZNF141 58 43.0 Weakly correlated
69 ZNF133 56 99.0 Weakly correlated
70 ZNF273 56 28.9 Weakly correlated
71 ZNF445 53 99.0 Weakly correlated
72 ZNF136 50 74.0 Highly correlated
73 ZNF471 49 94.0 Weakly correlated
74 ZNF735 46 28.9 Weakly correlated
75 ZNF160 45 74.0 Highly correlated
76 ZFP28 43 99.0 Weakly correlated
77 ZNF354C 41 99.0 Weakly correlated
78 ZNF549 39 87.0 Weakly correlated
79 ZNF823 39 43.0 Weakly correlated
80 ZNF682 36 28.9 Weakly correlated
81 ZNF135 35 94.0 Weakly correlated
82 ZNF671 35 94.0 Weakly correlated
83 ZNF675 35 8.6 Weakly correlated
84 ZNF91 34 6.0 Weakly correlated
85 ZNF331 33 94.0 Weakly correlated
86 ZNF730 33 19.6 Weakly correlated
87 ZNF425 32 94.0 Weakly correlated
88 ZNF169 30 94.0 Weakly correlated
89 ZNF248 30 99.0 Weakly correlated
90 ZNF26 30 99.0 Weakly correlated
91 ZNF100 29 28.9 Weakly correlated
92 ZNF436 29 180.0 Weakly correlated
93 ZNF347 28 43.0 Weakly correlated
94 ZNF468 28 28.9 Weakly correlated
95 ZNF674 28 99.0 Weakly correlated
96 ZNF354A 27 99.0 Weakly correlated
97 ZNF189 26 99.0 Weakly correlated
98 ZNF878 26 43.0 Weakly correlated
99 ZNF879 25 99.0 Weakly correlated
100 ZNF605 23 99.0 Weakly correlated
101 ZNF560 22 43.0 Weakly correlated
102 ZNF282 21 319.0 Weakly correlated
103 ZNF81 20 99.0 Weakly correlated
104 ZNF222 19 43.0 Weakly correlated
105 ZKSCAN2 18 180.0 Weakly correlated
106 ZNF563 18 28.9 Weakly correlated
107 ZFP69 17 99.0 Weakly correlated
108 ZNF33A 17 99.0 Weakly correlated
109 ZNF677 17 99.0 Weakly correlated
110 ZNF230 16 28.9 Weakly correlated
111 ZNF573 16 94.0 Weakly correlated
112 ZNF583 16 99.0 Weakly correlated
113 ZNF780A 16 43.0 Weakly correlated
114 ZNF816 16 28.9 Weakly correlated
115 ZNF211 15 94.0 Weakly correlated
116 ZNF41 15 99.0 Weakly correlated
117 ZNF44 15 43.0 Weakly correlated
118 ZNF611 15 19.6 Weakly correlated
119 ZNF616 15 43.0 Weakly correlated
120 ZIK1 14 87.0 Weakly correlated
121 ZNF17 14 69.0 Moderately correlated
122 ZNF562 14 28.9 Weakly correlated
123 ZNF85 14 28.9 Weakly correlated
124 ZNF124 13 43.0 Weakly correlated
125 ZNF420 13 94.0 Weakly correlated
126 ZNF845 13 28.9 Weakly correlated
127 ZNF93 13 8.6 Weakly correlated
128 ZNF440 12 28.9 Weakly correlated
129 ZNF510 12 99.0 Weakly correlated
130 ZNF700 12 28.9 Weakly correlated
131 ZNF75A 12 94.0 Weakly correlated
132 ZFP30 11 99.0 Weakly correlated
133 ZNF418 11 43.0 Weakly correlated
134 ZNF765 11 8.6 Weakly correlated
135 ZNF10 10 99.0 Weakly correlated
136 ZNF12 10 99.0 Weakly correlated
137 ZNF267 10 43.0 Weakly correlated
138 ZNF30 10 94.0 Weakly correlated
139 ZNF350 10 99.0 Weakly correlated
140 ZNF454 10 99.0 Weakly correlated
141 ZNF736 10 43.0 Weakly correlated
142 ZNF157 9 99.0 Weakly correlated
143 ZNF304 9 99.0 Weakly correlated
144 ZNF567 9 99.0 Weakly correlated
145 ZNF586 9 43.0 Weakly correlated
146 ZNF613 9 99.0 Weakly correlated
147 ZNF716 9 19.6 Weakly correlated
148 ZNF789 9 99.0 Weakly correlated
149 ZFP14 8 99.0 Weakly correlated
150 ZNF224 8 69.0 Moderately correlated
151 ZNF225 8 74.0 Highly correlated
152 ZNF337 8 43.0 Weakly correlated
153 ZNF557 8 15.2 Weakly correlated
154 ZNF777 8 319.0 Weakly correlated
155 ZNF343 7 74.0 Highly correlated
156 ZNF483 7 99.0 Weakly correlated
157 ZNF530 7 28.9 Weakly correlated
158 ZNF559 7 74.0 Highly correlated
159 ZNF561 7 43.0 Weakly correlated
160 ZNF565 7 99.0 Weakly correlated
161 ZNF627 7 74.0 Highly correlated
162 ZNF808 7 19.6 Weakly correlated
163 RBAK 6 99.0 Weakly correlated
164 ZNF184 6 99.0 Weakly correlated
165 ZNF234 6 99.0 Weakly correlated
166 ZNF302 6 43.0 Weakly correlated
167 ZNF417 6 28.9 Weakly correlated
168 ZNF43 6 43.0 Weakly correlated
169 ZNF705E 6 0.0 Weakly correlated
170 ZNF799 6 43.0 Weakly correlated
171 ZNF154 5 94.0 Weakly correlated
172 ZNF286A 5 160.0 Weakly correlated
173 ZNF333 5 99.0 Weakly correlated
174 ZNF430 5 19.6 Weakly correlated
175 ZNF587 5 28.9 Weakly correlated
176 ZNF607 5 43.0 Weakly correlated
177 ZNF649 5 28.9 Weakly correlated
178 ZNF77 5 87.0 Weakly correlated
179 ZNF813 5 28.9 Weakly correlated
180 ZNF846 5 74.0 Highly correlated
181 ZNF283 4 99.0 Weakly correlated
182 ZNF480 4 43.0 Weakly correlated
183 ZNF555 4 94.0 Weakly correlated
184 ZNF564 4 74.0 Highly correlated
185 ZNF568 4 99.0 Weakly correlated
186 ZNF727 4 19.6 Weakly correlated
187 ZNF763 4 15.2 Weakly correlated
188 ZNF776 4 43.0 Weakly correlated
189 ZNF791 4 87.0 Weakly correlated
190 ZFP82 3 99.0 Weakly correlated
191 ZFP90 3 99.0 Weakly correlated
192 ZNF177 3 94.0 Weakly correlated
193 ZNF19 3 99.0 Weakly correlated
194 ZNF205 3 180.0 Weakly correlated
195 ZNF235 3 99.0 Weakly correlated
196 ZNF254 3 43.0 Weakly correlated
197 ZNF543 3 99.0 Weakly correlated
198 ZNF550 3 94.0 Weakly correlated
199 ZNF551 3 94.0 Weakly correlated
200 ZNF582 3 99.0 Weakly correlated
201 ZNF626 3 0.0 Weakly correlated
202 ZNF681 3 28.9 Weakly correlated
203 ZNF74 3 99.0 Weakly correlated
204 ZNF850 3 28.9 Weakly correlated
205 ZNF114 2 28.9 Weakly correlated
206 ZNF250 2 99.0 Weakly correlated
207 ZNF253 2 19.6 Weakly correlated
208 ZNF383 2 99.0 Weakly correlated
209 ZNF398 2 99.0 Weakly correlated
210 ZNF433 2 43.0 Weakly correlated
211 ZNF442 2 43.0 Weakly correlated
212 ZNF443 2 19.6 Weakly correlated
213 ZNF45 2 99.0 Weakly correlated
214 ZNF529 2 99.0 Weakly correlated
215 ZNF548 2 94.0 Weakly correlated
216 ZNF566 2 99.0 Weakly correlated
217 ZNF569 2 99.0 Weakly correlated
218 ZNF570 2 99.0 Weakly correlated
219 ZNF624 2 99.0 Weakly correlated
220 ZNF658 2 99.0 Weakly correlated
221 ZNF665 2 28.9 Weakly correlated
222 ZNF684 2 99.0 Weakly correlated
223 ZNF726 2 28.9 Weakly correlated
224 ZNF746 2 99.0 Weakly correlated
225 ZNF749 2 28.9 Weakly correlated
226 ZNF761 2 19.6 Weakly correlated
227 ZNF780B 2 74.0 Highly correlated
228 ZNF782 2 99.0 Weakly correlated
229 ZNF7 2 99.0 Weakly correlated
230 ZNF836 2 43.0 Weakly correlated
231 ZNF891 2 99.0 Weakly correlated
232 PRDM9 1 0.0 Weakly correlated
233 ZFP92 1 99.0 Weakly correlated
234 ZIM2 1 0.0 Weakly correlated
235 ZKSCAN3 1 99.0 Weakly correlated
236 ZKSCAN4 1 99.0 Weakly correlated
237 ZNF132 1 94.0 Weakly correlated
238 ZNF14 1 69.0 Moderately correlated
239 ZNF180 1 99.0 Weakly correlated
240 ZNF181 1 94.0 Weakly correlated
241 ZNF226 1 99.0 Weakly correlated
242 ZNF227 1 99.0 Weakly correlated
243 ZNF233 1 99.0 Weakly correlated
244 ZNF311 1 99.0 Weakly correlated
245 ZNF324B 1 99.0 Weakly correlated
246 ZNF33B 1 99.0 Weakly correlated
247 ZNF34 1 99.0 Weakly correlated
248 ZNF37A 1 99.0 Weakly correlated
249 ZNF419 1 28.9 Weakly correlated
250 ZNF431 1 28.9 Weakly correlated
251 ZNF439 1 8.6 Weakly correlated
252 ZNF461 1 99.0 Weakly correlated
253 ZNF484 1 99.0 Weakly correlated
254 ZNF514 1 94.0 Weakly correlated
255 ZNF527 1 99.0 Weakly correlated
256 ZNF544 1 0.0 Weakly correlated
257 ZNF556 1 94.0 Weakly correlated
258 ZNF571 1 99.0 Weakly correlated
259 ZNF577 1 94.0 Weakly correlated
260 ZNF595 1 43.0 Weakly correlated
261 ZNF596 1 94.0 Weakly correlated
262 ZNF606 1 99.0 Weakly correlated
263 ZNF614 1 99.0 Weakly correlated
264 ZNF66 1 0.0 Weakly correlated
265 ZNF699 1 99.0 Weakly correlated
266 ZNF717 1 0.0 Weakly correlated
267 ZNF718 1 19.6 Weakly correlated
268 ZNF728 1 19.6 Weakly correlated
269 ZNF729 1 8.6 Weakly correlated
270 ZNF747 1 43.0 Weakly correlated
271 ZNF764 1 160.0 Weakly correlated
272 ZNF772 1 94.0 Weakly correlated
273 ZNF805 1 99.0 Weakly correlated
274 ZNF814 1 0.0 Weakly correlated
275 ZNF852 1 94.0 Weakly correlated
276 ZNF880 1 28.9 Weakly correlated
KZFPs Motif in Repeats The motif of KZFPs found by the meme-chip appears in the repeats sequence. :
# KZFP name Record number KZFP age(Mya) Time correlation with Repeats
1 ZNF284 1293 43.0 Weakly correlated
2 ZNF441 1073 43.0 Weakly correlated
3 ZNF519 645 19.6 Weakly correlated
4 ZNF101 612 43.0 Weakly correlated
5 ZNF257 426 0.0 Weakly correlated
6 ZNF182 400 99.0 Weakly correlated
7 ZNF394 385 99.0 Weakly correlated
8 ZNF382 345 99.0 Weakly correlated
9 ZNF18 333 160.0 Weakly correlated
10 ZNF140 312 99.0 Weakly correlated
11 ZNF610 311 28.9 Weakly correlated
12 ZNF506 275 28.9 Weakly correlated
13 ZNF792 271 94.0 Weakly correlated
14 ZFP37 263 99.0 Weakly correlated
15 ZNF429 209 28.9 Weakly correlated
16 ZNF460 159 74.0 Highly correlated
17 ZNF202 153 160.0 Weakly correlated
18 ZNF641 110 99.0 Weakly correlated
19 ZNF264 109 99.0 Weakly correlated
20 ZNF534 98 19.6 Weakly correlated
21 ZNF695 80 28.9 Weakly correlated
22 ZNF705B 58 28.9 Weakly correlated
23 ZNF334 57 99.0 Weakly correlated
24 ZNF705D 55 28.9 Weakly correlated
25 ZIM3 52 87.0 Weakly correlated
26 ZNF287 46 99.0 Weakly correlated
27 ZNF445 38 99.0 Weakly correlated
28 ZNF680 35 28.9 Weakly correlated
29 ZNF786 35 99.0 Weakly correlated
30 ZFP57 33 87.0 Weakly correlated
31 ZNF554 32 99.0 Weakly correlated
32 ZNF263 31 180.0 Weakly correlated
33 ZNF585A 27 99.0 Weakly correlated
34 ZNF485 25 94.0 Weakly correlated
35 ZNF141 24 43.0 Weakly correlated
36 ZNF324 24 99.0 Weakly correlated
37 ZNF2 18 99.0 Weakly correlated
38 ZNF823 18 43.0 Weakly correlated
39 ZNF135 17 94.0 Weakly correlated
40 ZNF558 17 99.0 Weakly correlated
41 ZKSCAN5 16 160.0 Weakly correlated
42 ZNF479 15 6.4 Weakly correlated
43 ZNF707 15 74.0 Highly correlated
44 ZNF425 14 94.0 Weakly correlated
45 ZNF273 14 28.9 Weakly correlated
46 ZNF793 14 99.0 Weakly correlated
47 ZNF679 13 28.9 Weakly correlated
48 ZNF585B 12 99.0 Weakly correlated
49 ZNF597 12 94.0 Weakly correlated
50 ZNF766 12 43.0 Weakly correlated
51 ZNF28 12 28.9 Weakly correlated
52 ZNF75D 11 94.0 Weakly correlated
53 ZNF8 10 99.0 Weakly correlated
54 ZNF701 10 28.9 Weakly correlated
55 ZNF169 9 94.0 Weakly correlated
56 ZNF251 9 94.0 Weakly correlated
57 ZNF616 9 43.0 Weakly correlated
58 ZNF671 9 94.0 Weakly correlated
59 ZNF674 8 99.0 Weakly correlated
60 ZNF84 8 99.0 Weakly correlated
61 ZNF222 8 43.0 Weakly correlated
62 ZFP69B 6 99.0 Weakly correlated
63 ZIK1 6 87.0 Weakly correlated
64 ZNF471 6 94.0 Weakly correlated
65 ZFP28 5 99.0 Weakly correlated
66 ZNF468 5 28.9 Weakly correlated
67 ZNF723 5 15.2 Weakly correlated
68 ZNF417 5 28.9 Weakly correlated
69 ZNF675 5 8.6 Weakly correlated
70 ZNF440 4 28.9 Weakly correlated
71 ZNF560 4 43.0 Weakly correlated
72 ZNF780A 4 43.0 Weakly correlated
73 ZNF736 3 43.0 Weakly correlated
74 ZNF547 3 74.0 Highly correlated
75 ZNF573 3 94.0 Weakly correlated
76 ZNF587 3 28.9 Weakly correlated
77 ZNF557 3 15.2 Weakly correlated
78 ZNF320 3 28.9 Weakly correlated
79 ZNF100 2 28.9 Weakly correlated
80 ZNF136 2 74.0 Highly correlated
81 ZNF189 2 99.0 Weakly correlated
82 ZNF677 2 99.0 Weakly correlated
83 ZNF317 2 99.0 Weakly correlated
84 ZNF282 2 319.0 Weakly correlated
85 ZNF483 2 99.0 Weakly correlated
86 ZNF354C 2 99.0 Weakly correlated
87 ZNF26 2 99.0 Weakly correlated
88 ZNF486 2 8.6 Weakly correlated
89 ZNF92 2 28.9 Weakly correlated
90 ZNF799 2 43.0 Weakly correlated
91 ZNF347 2 43.0 Weakly correlated
92 ZNF160 2 74.0 Highly correlated
93 ZNF225 2 74.0 Highly correlated
94 ZFP69 1 99.0 Weakly correlated
95 ZNF124 1 43.0 Weakly correlated
96 ZNF132 1 94.0 Weakly correlated
97 ZNF133 1 99.0 Weakly correlated
98 ZNF331 1 94.0 Weakly correlated
99 ZNF561 1 43.0 Weakly correlated
100 ZNF776 1 43.0 Weakly correlated
101 ZNF211 1 94.0 Weakly correlated
102 ZNF454 1 99.0 Weakly correlated
103 ZNF584 1 99.0 Weakly correlated
104 ZFP14 1 99.0 Weakly correlated
105 ZNF197 1 99.0 Weakly correlated
106 ZNF816 1 28.9 Weakly correlated
107 ZNF175 1 94.0 Weakly correlated
108 ZNF568 1 99.0 Weakly correlated
109 ZNF283 1 99.0 Weakly correlated
110 ZNF442 1 43.0 Weakly correlated
111 ZNF490 1 43.0 Weakly correlated
112 ZNF700 1 28.9 Weakly correlated
113 ZNF746 1 99.0 Weakly correlated
114 ZNF778 1 74.0 Highly correlated
115 ZNF789 1 99.0 Weakly correlated
116 ZNF805 1 99.0 Weakly correlated
117 ZNF846 1 74.0 Highly correlated
118 ZNF613 1 99.0 Weakly correlated
119 ZNF879 1 99.0 Weakly correlated
120 ZNF880 1 28.9 Weakly correlated
121 ZNF563 1 28.9 Weakly correlated
122 ZNF589 1 28.9 Weakly correlated
123 ZNF549 1 87.0 Weakly correlated
124 ZNF596 1 94.0 Weakly correlated
125 ZNF705E 1 0.0 Weakly correlated
126 ZNF765 1 8.6 Weakly correlated
127 ZNF777 1 319.0 Weakly correlated
KZFPs Motif in Repeats Consensus The motif of KZFPs found by the meme-chip can find the corresponding region on the consensus sequence of repeats. :
# KZFP name KZFP age(Mya) Time correlation with Repeats
1 ZFP37 99.0 Weakly correlated
2 ZFP69B 99.0 Weakly correlated
3 ZNF182 99.0 Weakly correlated
4 ZNF18 160.0 Weakly correlated
5 ZNF222 43.0 Weakly correlated
6 ZNF251 94.0 Weakly correlated
7 ZNF263 180.0 Weakly correlated
8 ZNF287 99.0 Weakly correlated
9 ZNF28 28.9 Weakly correlated
10 ZNF382 99.0 Weakly correlated
11 ZNF429 28.9 Weakly correlated
12 ZNF441 43.0 Weakly correlated
13 ZNF445 99.0 Weakly correlated
14 ZNF506 28.9 Weakly correlated
15 ZNF554 99.0 Weakly correlated
16 ZNF671 94.0 Weakly correlated
17 ZNF695 28.9 Weakly correlated
18 ZNF707 74.0 Highly correlated
19 ZNF792 94.0 Weakly correlated
20 ZNF84 99.0 Weakly correlated