ZRdb KZFP & Repeats
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Human_ZFP37

  • Protein
    Zinc finger protein 37 homolog
  • Length
    630
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    99.0 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MSVSSGVQILTKPETVDRRRSAETTKEAGRPLEMAVSEPEASAAEWKQLDPAQSNLYNDVMLENYCNQASMGCQAPKPDMISKLEKGEAPWLGKGKRPSQGCPSKIARPKQKETDGKVQKDDDQLENIQKSQNKLLREVAVKKKTQAKKNGSDCGSLGKKNNLHKKHVPSKKRLLKFESCGKILKQNLDLPDHSRNCVKRKSDAAKEHKKSFNHSLSDTRKGKKQTGKKHEKLSSHSSSDKCNKTGKKHDKLCCHSSSHIKQDKIQTGEKHEKSPSLSSSTKHEKPQACVKPYECNQCGKVLSHKQGLIDHQRVHTGEKPYECNECGIAFSQKSHLVVHQRTHTGEKPYECIQCGKAHGHKHALTDHLRIHTGEKPYECAECGKTFRHSSNLIQHVRSHTGEKPYECKECGKSFRYNSSLTEHVRTHTGEIPYECNECGKAFKYSSSLTKHMRIHTGEKPFECNECGKAFSKKSHLIIHQRTHTKEKPYKCNECGKAFGHSSSLTYHMRTHTGESPFECNQCGKGFKQIEGLTQHQRVHTGEKPYECNECGKAFSQKSHLIVHQRTHTGEKPYECNECEKAFNAKSQLVIHQRSHTGEKPYECNECGKTFKQNASLTKHVKTHSEDKSHE
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 32..103
2 C2h2 293..315
3 C2h2 321..343
4 C2h2 349..367
5 C2h2 377..399
6 C2h2 405..427
7 C2h2 433..455
8 C2h2 461..483
9 C2h2 489..511
10 C2h2 517..539
11 C2h2 545..567
12 C2h2 573..595
13 C2h2 601..623
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity
3 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
4 Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific
5 Molecular Function RNA polymerase II transcription regulatory region sequence-specific DNA binding
6 Molecular Function zinc ion binding
7 Biological Process negative regulation of transcription by RNA polymerase II
8 Biological Process regulation of DNA-templated transcription
9 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 2825 **** 99.0 Highly correlated
2 L2a 2106 **** 99.0 Highly correlated
3 MIR 1833 **** 99.0 Highly correlated
4 L2c 1756 **** 99.0 Highly correlated
5 L2b 1563 **** 99.0 Highly correlated
6 MIRc 1428 **** 99.0 Highly correlated
7 MIR3 1422 **** 99.0 Highly correlated
8 AluSx1 1291 **** 74.0 Weakly correlated
9 AluSx 1257 **** 74.0 Weakly correlated
10 AluJb 1221 **** 74.0 Weakly correlated
11 AluSz 971 **** 74.0 Weakly correlated
12 L2 768 **** 99.0 Highly correlated
13 AluY 742 n.s 74.0 Weakly correlated
14 AluJr 739 **** 74.0 Weakly correlated
15 AluJo 680 **** 74.0 Weakly correlated
16 AluSq2 535 **** 74.0 Weakly correlated
17 AluSp 472 **** 74.0 Weakly correlated
18 L3 389 **** 99.0 Highly correlated
19 AluSg 380 **** 74.0 Weakly correlated
20 AluSz6 368 **** 74.0 Weakly correlated
21 AluSx3 343 **** 74.0 Weakly correlated
22 AluSc 280 *** 74.0 Weakly correlated
23 MIR1_Amn 249 **** 319.0 Weakly correlated
24 L1MC4 232 ** 99.0 Highly correlated
25 L1M5 219 n.s 99.0 Highly correlated
26 AluSq 218 **** 74.0 Weakly correlated
27 MLT1C 210 **** 94.0 Weakly correlated
28 FLAM_C 186 **** 74.0 Weakly correlated
29 L1ME4a 151 n.s 99.0 Highly correlated
30 MLT1K 151 **** 99.0 Highly correlated
31 L3b 150 **** 99.0 Highly correlated
32 AluSc8 147 n.s 74.0 Weakly correlated
33 AluJr4 140 *** 74.0 Weakly correlated
34 L1MB7 140 n.s 99.0 Highly correlated
35 MamRTE1 132 **** 99.0 Highly correlated
36 L1MB3 124 n.s 99.0 Highly correlated
37 MLT1B 123 n.s 99.0 Highly correlated
38 FRAM 115 **** 74.0 Weakly correlated
39 HAL1 111 n.s 99.0 Highly correlated
40 L1MEd 111 n.s 99.0 Highly correlated
41 L1MC5a 107 n.s 99.0 Highly correlated
42 L1ME1 104 n.s 99.0 Highly correlated
43 L1ME4b 103 n.s 99.0 Highly correlated
44 L1M4 101 n.s 99.0 Highly correlated
45 FLAM_A 99 **** 74.0 Weakly correlated
46 L1PA2 97 n.s 15.2 Weakly correlated
47 LTR13 92 **** 19.6 Weakly correlated
48 LTR8 91 **** 43.0 Weakly correlated
49 MLT1J 91 n.s 99.0 Highly correlated
50 L1PA3 90 n.s 19.6 Weakly correlated
51 MLT1I 90 **** 99.0 Highly correlated
52 AluSx4 84 n.s 74.0 Weakly correlated
53 MLT1H 84 ** 99.0 Highly correlated
54 AmnSINE1 83 **** 319.0 Weakly correlated
55 L1MEc 83 n.s 99.0 Highly correlated
56 MLT1L 83 *** 99.0 Highly correlated
57 L1ME3A 81 n.s 99.0 Highly correlated
58 MLT1D 81 n.s 99.0 Highly correlated
59 L1MB8 79 n.s 99.0 Highly correlated
60 L1ME3G 76 n.s 99.0 Highly correlated
61 AluSg4 75 **** 74.0 Weakly correlated
62 AluSg7 75 ** 74.0 Weakly correlated
63 L1MC3 74 n.s 99.0 Highly correlated
64 L1MEg 70 n.s 99.0 Highly correlated
65 MamSINE1 65 **** 99.0 Highly correlated
66 LTR33 64 * 99.0 Highly correlated
67 MLT1A0 63 n.s 99.0 Highly correlated
68 MLT1J2 63 **** 99.0 Highly correlated
69 L1ME4c 62 ** 99.0 Highly correlated
70 L1MC5 61 n.s 99.0 Highly correlated
71 L4_A_Mam 61 **** 99.0 Highly correlated
72 LTR8B 61 **** 43.0 Weakly correlated
73 L1ME2 60 n.s 99.0 Highly correlated
74 ERVL-E-int 59 n.s 99.0 Highly correlated
75 L1MEf 57 n.s 99.0 Highly correlated
76 Plat_L3 57 **** 99.0 Highly correlated
77 AluSc5 56 * 74.0 Weakly correlated
78 L1M1 56 n.s 74.0 Weakly correlated
79 L1MA9 56 n.s 99.0 Highly correlated
80 LTR41C 55 **** 99.0 Highly correlated
81 ERV3-16A3_I-int 52 n.s 99.0 Highly correlated
82 L1MC4a 52 n.s 99.0 Highly correlated
83 Alu 50 **** 74.0 Weakly correlated
84 L1MB2 50 n.s 99.0 Highly correlated
85 LTR41 50 **** 99.0 Highly correlated
86 L1MD2 49 n.s 99.0 Highly correlated
87 L1PA16 48 n.s 74.0 Weakly correlated
88 MLT1N2 48 **** 99.0 Highly correlated
89 HERVK-int 47 **** 28.9 Weakly correlated
90 L1MB5 47 n.s 99.0 Highly correlated
91 L1PB1 47 n.s 74.0 Weakly correlated
92 AluYm1 46 * 19.6 Weakly correlated
93 L1MC1 46 n.s 99.0 Highly correlated
94 MLT1F1 45 **** 99.0 Highly correlated
95 AluYc 44 **** 74.0 Weakly correlated
96 HUERS-P3-int 44 **** 43.0 Weakly correlated
97 L1MA4 44 n.s 87.0 Weakly correlated
98 MSTB1 43 n.s 74.0 Weakly correlated
99 L1ME3Cz 42 n.s 99.0 Highly correlated
100 LTR10A 42 **** 28.9 Weakly correlated
101 LTR41B 42 **** 99.0 Highly correlated
102 MLT1F 42 * 99.0 Highly correlated
103 LTR78 41 * 99.0 Highly correlated
104 L1M2 40 n.s 99.0 Highly correlated
105 L1MA8 40 n.s 87.0 Weakly correlated
106 L1MD 40 n.s 99.0 Highly correlated
107 L1PA5 40 n.s 19.6 Weakly correlated
108 MLT1A 40 n.s 99.0 Highly correlated
109 AluYj4 39 **** 0.0 Weakly correlated
110 L1MCa 39 n.s 99.0 Highly correlated
111 LTR16C 39 n.s 99.0 Highly correlated
112 L1ME3 38 n.s 99.0 Highly correlated
113 L1ME3B 38 n.s 99.0 Highly correlated
114 L1PA4 38 n.s 19.6 Weakly correlated
115 L1PB4 38 n.s 99.0 Highly correlated
116 HAL1ME 37 n.s 99.0 Highly correlated
117 MLT1G 37 *** 99.0 Highly correlated
118 MLT2D 37 ** 99.0 Highly correlated
119 L1M4b 36 n.s 99.0 Highly correlated
120 L1MA6 35 n.s 87.0 Weakly correlated
121 L1MC 35 n.s 99.0 Highly correlated
122 L1MD3 35 n.s 99.0 Highly correlated
123 L1ME2z 35 n.s 99.0 Highly correlated
124 LTR50 35 **** 99.0 Highly correlated
125 MLT1M 35 **** 99.0 Highly correlated
126 HUERS-P3b-int 34 **** 43.0 Weakly correlated
127 MER21C 34 n.s 99.0 Highly correlated
128 MER50 34 * 43.0 Weakly correlated
129 MLT1J1 34 * 99.0 Highly correlated
130 MamGypLTR3 34 **** 99.0 Highly correlated
131 HAL1b 33 n.s 99.0 Highly correlated
132 MLT1H2 33 * 99.0 Highly correlated
133 L1MDa 32 n.s 99.0 Highly correlated
134 L2-3_Crp 32 **** 431.0 Weakly correlated
135 LFSINE_Vert 32 **** 319.0 Weakly correlated
136 LTR16A1 32 *** 99.0 Highly correlated
137 L1MA3 31 n.s 74.0 Weakly correlated
138 L1MB4 31 n.s 99.0 Highly correlated
139 L1PA13 31 n.s 74.0 Weakly correlated
140 L4_C_Mam 31 n.s 99.0 Highly correlated
141 THE1B 31 n.s 43.0 Weakly correlated
142 AluSq10 30 **** 74.0 Weakly correlated
143 L1MEi 30 n.s 99.0 Highly correlated
144 LTR16A 30 n.s 99.0 Highly correlated
145 ERVL-B4-int 29 n.s 99.0 Highly correlated
146 MLT1E2 28 n.s 99.0 Highly correlated
147 MLT1F2 28 n.s 99.0 Highly correlated
148 L1PA15 27 n.s 74.0 Weakly correlated
149 L1PBa 27 n.s 74.0 Weakly correlated
150 LTR55 26 **** 99.0 Highly correlated
151 LTR5_Hs 26 *** 0.0 Weakly correlated
152 HERVIP10FH-int 25 **** 28.9 Weakly correlated
153 L4_B_Mam 25 * 99.0 Highly correlated
154 LTR16 25 n.s 99.0 Highly correlated
155 MLT1G1 25 n.s 99.0 Highly correlated
156 MSTD 25 n.s 74.0 Weakly correlated
157 AluYa5 24 n.s 15.2 Weakly correlated
158 L1MA4A 24 n.s 87.0 Weakly correlated
159 L1MA5 24 n.s 87.0 Weakly correlated
160 L1ME3F 24 n.s 99.0 Highly correlated
161 L1PA10 24 n.s 74.0 Weakly correlated
162 LTR67B 24 * 99.0 Highly correlated
163 MER4-int 24 n.s 74.0 Weakly correlated
164 MamRep605 24 n.s 99.0 Highly correlated
165 L1MC2 23 n.s 99.0 Highly correlated
166 LTR10F 23 **** 28.9 Weakly correlated
167 LTR71B 23 **** 43.0 Weakly correlated
168 MER89 23 **** 99.0 Highly correlated
169 MSTA 23 n.s 43.0 Weakly correlated
170 CR1-3_Croc 22 **** 319.0 Weakly correlated
171 L1MCc 22 n.s 99.0 Highly correlated
172 L1PA17 22 n.s 74.0 Weakly correlated
173 LTR12C 22 n.s 19.6 Weakly correlated
174 LTR79 22 n.s 99.0 Highly correlated
175 LTR85a 22 **** 99.0 Highly correlated
176 LTR88b 22 **** 99.0 Highly correlated
177 MLT2B4 22 n.s 99.0 Highly correlated
178 L1M3 21 n.s 99.0 Highly correlated
179 L1ME5 21 n.s 99.0 Highly correlated
180 L1PA7 21 n.s 74.0 Weakly correlated
181 LTR76 21 **** 74.0 Weakly correlated
182 LTR88a 21 **** 99.0 Highly correlated
183 MER41B 21 n.s 74.0 Weakly correlated
184 MER65C 21 **** 74.0 Weakly correlated
185 MLT1O 21 n.s 99.0 Highly correlated
186 MLT2F 21 * 99.0 Highly correlated
187 FAM 20 n.s 87.0 Weakly correlated
188 L1M4c 20 n.s 99.0 Highly correlated
189 L1MA7 20 n.s 87.0 Weakly correlated
190 L1MD1 20 n.s 99.0 Highly correlated
191 L1PA8 20 n.s 74.0 Weakly correlated
192 MLT1E1A 20 n.s 99.0 Highly correlated
193 PRIMA4-int 20 **** 74.0 Weakly correlated
194 AluYf1 19 * 19.6 Weakly correlated
195 CR1_Mam 19 **** 99.0 Highly correlated
196 L1M6 19 n.s 99.0 Highly correlated
197 L1MA5A 19 n.s 87.0 Weakly correlated
198 L1P4 19 n.s 74.0 Weakly correlated
199 L1PB3 19 n.s 74.0 Weakly correlated
200 MER68 19 * 99.0 Highly correlated
201 HAL1M8 18 n.s 99.0 Highly correlated
202 L1MA2 18 n.s 74.0 Weakly correlated
203 L1ME3E 18 n.s 99.0 Highly correlated
204 L1PREC2 18 n.s 43.0 Weakly correlated
205 L2-1_AMi 18 **** 319.0 Weakly correlated
206 LTR16D 18 **** 99.0 Highly correlated
207 LTR26 18 **** 74.0 Weakly correlated
208 LTR33A_ 18 * 99.0 Highly correlated
209 MER21B 18 n.s 99.0 Highly correlated
210 MER41A 18 n.s 74.0 Weakly correlated
211 MER4C 18 **** 74.0 Weakly correlated
212 MER66B 18 ** 43.0 Weakly correlated
213 MLT1A1 18 n.s 87.0 Weakly correlated
214 MLT1G3 18 n.s 99.0 Highly correlated
215 AluSq4 17 n.s 74.0 Weakly correlated
216 HERVL18-int 17 ** 43.0 Weakly correlated
217 L1M7 17 n.s 99.0 Highly correlated
218 MER77B 17 * 99.0 Highly correlated
219 MLT2B3 17 n.s 99.0 Highly correlated
220 L1M3f 16 n.s 87.0 Weakly correlated
221 L1MB1 16 n.s 99.0 Highly correlated
222 LTR104_Mam 16 ** 99.0 Highly correlated
223 LTR18B 16 **** 43.0 Weakly correlated
224 LTR88c 16 **** 99.0 Highly correlated
225 LTR9 16 ** 43.0 Weakly correlated
226 MER4D 16 n.s 74.0 Weakly correlated
227 MamGypsy2-I 16 n.s 99.0 Highly correlated
228 THE1D 16 n.s 43.0 Weakly correlated
229 AluYh3 15 n.s 15.2 Weakly correlated
230 HERVL40-int 15 n.s 99.0 Highly correlated
231 L1P1 15 n.s 19.6 Weakly correlated
232 L1PA6 15 n.s 28.9 Weakly correlated
233 LTR13_ 15 **** 28.9 Weakly correlated
234 LTR16E2 15 n.s 99.0 Highly correlated
235 LTR33A 15 n.s 99.0 Highly correlated
236 LTR82A 15 ** 99.0 Highly correlated
237 LTR83 15 **** 99.0 Highly correlated
238 MER57E3 15 **** 74.0 Weakly correlated
239 MER76 15 *** 99.0 Highly correlated
240 MamGypLTR3a 15 ** 99.0 Highly correlated
241 L1M8 14 n.s 99.0 Highly correlated
242 L1MDb 14 n.s 99.0 Highly correlated
243 L1PA15-16 14 n.s 74.0 Weakly correlated
244 LTR65 14 **** 99.0 Highly correlated
245 LTR8A 14 n.s 43.0 Weakly correlated
246 MER31B 14 n.s 99.0 Highly correlated
247 MER39 14 n.s 74.0 Weakly correlated
248 MLT1H1 14 n.s 99.0 Highly correlated
249 X6B_LINE 14 **** 99.0 Highly correlated
250 AluYb8 13 n.s 15.2 Weakly correlated
251 AmnSINE2 13 **** 319.0 Weakly correlated
252 ERV24_Prim-int 13 ** 74.0 Weakly correlated
253 HERVH-int 13 n.s 28.9 Weakly correlated
254 HERVL-int 13 n.s 74.0 Weakly correlated
255 L1HS 13 n.s 8.6 Weakly correlated
256 L1MEh 13 n.s 99.0 Highly correlated
257 LTR101_Mam 13 * 99.0 Highly correlated
258 LTR16B2 13 n.s 99.0 Highly correlated
259 LTR18A 13 **** 43.0 Weakly correlated
260 MER49 13 n.s 43.0 Weakly correlated
261 MER4B-int 13 n.s 99.0 Highly correlated
262 MER51A 13 n.s 43.0 Weakly correlated
263 MER57-int 13 n.s 87.0 Weakly correlated
264 MER74A 13 n.s 99.0 Highly correlated
265 MSTB 13 n.s 43.0 Weakly correlated
266 SVA_A 13 n.s 19.6 Weakly correlated
267 THE1C 13 n.s 43.0 Weakly correlated
268 L1M3e 12 n.s 99.0 Highly correlated
269 L1P2 12 n.s 28.9 Weakly correlated
270 L1PA14 12 n.s 74.0 Weakly correlated
271 LTR10C 12 ** 28.9 Weakly correlated
272 LTR14B 12 *** 28.9 Weakly correlated
273 LTR16A2 12 n.s 99.0 Highly correlated
274 MER21A 12 n.s 74.0 Weakly correlated
275 MER54B 12 *** 87.0 Weakly correlated
276 MER65-int 12 n.s 87.0 Weakly correlated
277 MLT2B1 12 n.s 99.0 Highly correlated
278 ERV24B_Prim-int 11 ** 74.0 Weakly correlated
279 HERV17-int 11 n.s 28.9 Weakly correlated
280 HERVK22-int 11 n.s 43.0 Weakly correlated
281 L1ME3C 11 n.s 99.0 Highly correlated
282 LTR45B 11 *** 74.0 Weakly correlated
283 LTR54 11 * 74.0 Weakly correlated
284 LTR64 11 **** 74.0 Weakly correlated
285 LTR7 11 n.s 19.6 Weakly correlated
286 MER110 11 ** 99.0 Highly correlated
287 MER4A 11 n.s 74.0 Weakly correlated
288 MER50-int 11 n.s 43.0 Weakly correlated
289 MER77 11 n.s 99.0 Highly correlated
290 MER90a 11 n.s 99.0 Highly correlated
291 MLT2C1 11 n.s 99.0 Highly correlated
292 MSTC 11 n.s 74.0 Weakly correlated
293 SVA_D 11 n.s 15.2 Weakly correlated
294 SVA_E 11 * 0.0 Weakly correlated
295 HERVS71-int 10 n.s 28.9 Weakly correlated
296 LTR12E 10 *** 19.6 Weakly correlated
297 LTR25 10 *** 43.0 Weakly correlated
298 LTR33B 10 n.s 99.0 Highly correlated
299 LTR4 10 **** 28.9 Weakly correlated
300 LTR48 10 n.s 74.0 Weakly correlated
301 MER101-int 10 n.s 74.0 Weakly correlated
302 MER4D1 10 n.s 74.0 Weakly correlated
303 MER52A 10 n.s 74.0 Weakly correlated
304 MLT1E3 10 n.s 99.0 Highly correlated
305 MLT2A2 10 n.s 74.0 Weakly correlated
306 MSTB2 10 n.s 74.0 Weakly correlated
307 MamGypsy2-LTR 10 **** 99.0 Highly correlated
308 Penelope1_Vert 10 **** 319.0 Weakly correlated
309 SVA_C 10 n.s 15.2 Weakly correlated
310 X7A_LINE 10 **** 319.0 Weakly correlated
311 AluYe5 9 n.s 74.0 Weakly correlated
312 CR1-16_AMi 9 **** 319.0 Weakly correlated
313 L1M4a1 9 n.s 99.0 Highly correlated
314 L1M4a2 9 n.s 99.0 Highly correlated
315 L1PB 9 n.s 74.0 Weakly correlated
316 L1PB2 9 n.s 74.0 Weakly correlated
317 LTR16E1 9 n.s 99.0 Highly correlated
318 LTR19B 9 *** 43.0 Weakly correlated
319 LTR1A2 9 n.s 43.0 Weakly correlated
320 LTR2 9 n.s 28.9 Weakly correlated
321 LTR25-int 9 n.s 43.0 Weakly correlated
322 LTR37-int 9 n.s 99.0 Highly correlated
323 LTR44 9 **** 74.0 Weakly correlated
324 LTR72 9 **** 74.0 Weakly correlated
325 LTR75 9 *** 99.0 Highly correlated
326 MER34D 9 **** 74.0 Weakly correlated
327 MER41C 9 n.s 74.0 Weakly correlated
328 MER61-int 9 n.s 43.0 Weakly correlated
329 MER65A 9 n.s 74.0 Weakly correlated
330 MER67C 9 n.s 99.0 Highly correlated
331 MER72 9 n.s 43.0 Weakly correlated
332 MER90 9 * 99.0 Highly correlated
333 AluYg6 8 * 15.2 Weakly correlated
334 AluYk11 8 *** 15.2 Weakly correlated
335 HERVH48-int 8 n.s 28.9 Weakly correlated
336 HERVI-int 8 * 28.9 Weakly correlated
337 L1MA10 8 n.s 99.0 Highly correlated
338 L1MEb 8 n.s 99.0 Highly correlated
339 L1PA11 8 n.s 74.0 Weakly correlated
340 L5 8 ** 99.0 Highly correlated
341 LTR19C 8 **** 43.0 Weakly correlated
342 LTR36 8 * 74.0 Weakly correlated
343 LTR49-int 8 n.s 74.0 Weakly correlated
344 LTR78B 8 n.s 99.0 Highly correlated
345 LTR85b 8 n.s 99.0 Highly correlated
346 LTR89 8 n.s 99.0 Highly correlated
347 MER31-int 8 n.s 99.0 Highly correlated
348 MER31A 8 n.s 87.0 Weakly correlated
349 MER34A 8 n.s 99.0 Highly correlated
350 MER34A1 8 n.s 99.0 Highly correlated
351 MER39B 8 n.s 74.0 Weakly correlated
352 MER4A1 8 n.s 74.0 Weakly correlated
353 MER66C 8 * 43.0 Weakly correlated
354 MamGypLTR1b 8 n.s 99.0 Highly correlated
355 AluYc3 7 * 74.0 Weakly correlated
356 AluYi6 7 ** 15.2 Weakly correlated
357 HERVFH21-int 7 * 28.9 Weakly correlated
358 HERVL74-int 7 * 99.0 Highly correlated
359 L1M3c 7 n.s 99.0 Highly correlated
360 L1ME3D 7 n.s 99.0 Highly correlated
361 L1P3 7 n.s 74.0 Weakly correlated
362 L1PBa1 7 n.s 74.0 Weakly correlated
363 L1PBb 7 n.s 74.0 Weakly correlated
364 LTR15 7 ** 28.9 Weakly correlated
365 LTR24 7 ** 74.0 Weakly correlated
366 LTR37B 7 n.s 99.0 Highly correlated
367 LTR40c 7 n.s 99.0 Highly correlated
368 LTR46 7 *** 43.0 Weakly correlated
369 LTR51 7 * 74.0 Weakly correlated
370 LTR81B 7 n.s 99.0 Highly correlated
371 LTR84a 7 * 99.0 Highly correlated
372 LTR84b 7 n.s 99.0 Highly correlated
373 LTR9B 7 n.s 43.0 Weakly correlated
374 MER41G 7 **** 74.0 Weakly correlated
375 MER4E 7 n.s 74.0 Weakly correlated
376 MER51-int 7 n.s 43.0 Weakly correlated
377 MER68B 7 * 99.0 Highly correlated
378 MamGyp-int 7 n.s 99.0 Highly correlated
379 MamGypLTR1c 7 n.s 99.0 Highly correlated
380 MamRep1527 7 n.s 99.0 Highly correlated
381 X7B_LINE 7 ** 319.0 Weakly correlated
382 X7C_LINE 7 *** 319.0 Weakly correlated
383 AluYk3 6 n.s 19.6 Weakly correlated
384 CR1-L3A_Croc 6 **** 319.0 Weakly correlated
385 HERVE-int 6 n.s 19.6 Weakly correlated
386 L1MA1 6 n.s 74.0 Weakly correlated
387 L1MCb 6 n.s 99.0 Highly correlated
388 LTR21A 6 **** 28.9 Weakly correlated
389 LTR26E 6 **** 74.0 Weakly correlated
390 LTR35A 6 **** 43.0 Weakly correlated
391 LTR37A 6 n.s 99.0 Highly correlated
392 LTR3B 6 **** 28.9 Weakly correlated
393 LTR40b 6 n.s 99.0 Highly correlated
394 LTR7B 6 n.s 28.9 Weakly correlated
395 LTR82B 6 n.s 99.0 Highly correlated
396 LTR85c 6 n.s 99.0 Highly correlated
397 LTR87 6 n.s 99.0 Highly correlated
398 MER110A 6 n.s 99.0 Highly correlated
399 MER11D 6 n.s 19.6 Weakly correlated
400 MER34 6 n.s 87.0 Weakly correlated
401 MER34B 6 n.s 87.0 Weakly correlated
402 MER34C2 6 n.s 74.0 Weakly correlated
403 MER51C 6 ** 43.0 Weakly correlated
404 MER51D 6 **** 43.0 Weakly correlated
405 MER52C 6 n.s 74.0 Weakly correlated
406 MER52D 6 n.s 74.0 Weakly correlated
407 MER54A 6 n.s 87.0 Weakly correlated
408 MER57B2 6 n.s 43.0 Weakly correlated
409 MER61A 6 n.s 43.0 Weakly correlated
410 MER67A 6 * 99.0 Highly correlated
411 MER67D 6 n.s 99.0 Highly correlated
412 MER83 6 n.s 43.0 Weakly correlated
413 MER88 6 **** 99.0 Highly correlated
414 MLT1C-int 6 n.s 94.0 Weakly correlated
415 MLT1D-int 6 n.s 99.0 Highly correlated
416 MLT1J-int 6 n.s 99.0 Highly correlated
417 MLT2C2 6 n.s 99.0 Highly correlated
418 MamGypLTR2b 6 n.s 99.0 Highly correlated
419 MamRep1151 6 n.s 99.0 Highly correlated
420 PrimLTR79 6 **** 74.0 Weakly correlated
421 SVA_B 6 n.s 15.2 Weakly correlated
422 X6A_LINE 6 * 99.0 Highly correlated
423 AluYa8 5 *** 15.2 Weakly correlated
424 ERV3-16A3_LTR 5 n.s 99.0 Highly correlated
425 ERVL-int 5 n.s 99.0 Highly correlated
426 HERV15-int 5 n.s 28.9 Weakly correlated
427 HERV35I-int 5 n.s 43.0 Weakly correlated
428 HERVK13-int 5 * 19.6 Weakly correlated
429 L1M6B 5 n.s 99.0 Highly correlated
430 L1MEj 5 n.s 99.0 Highly correlated
431 L1P4a 5 n.s 74.0 Weakly correlated
432 L1PA12 5 n.s 74.0 Weakly correlated
433 LOR1b 5 n.s 74.0 Weakly correlated
434 LTR10D 5 ** 28.9 Weakly correlated
435 LTR10E 5 n.s 28.9 Weakly correlated
436 LTR16B 5 n.s 99.0 Highly correlated
437 LTR16B1 5 n.s 99.0 Highly correlated
438 LTR16D1 5 ** 99.0 Highly correlated
439 LTR19A 5 n.s 43.0 Weakly correlated
440 LTR23 5 n.s 74.0 Weakly correlated
441 LTR3B_ 5 * 28.9 Weakly correlated
442 LTR40A1 5 n.s 99.0 Highly correlated
443 LTR40a 5 n.s 99.0 Highly correlated
444 LTR43 5 n.s 74.0 Weakly correlated
445 LTR52 5 n.s 99.0 Highly correlated
446 LTR53 5 n.s 99.0 Highly correlated
447 LTR54B 5 n.s 74.0 Weakly correlated
448 LTR56 5 n.s 74.0 Weakly correlated
449 LTR75B 5 ** 99.0 Highly correlated
450 LTR75_1 5 *** 99.0 Highly correlated
451 LTR81 5 ** 99.0 Highly correlated
452 LTR81A 5 n.s 99.0 Highly correlated
453 LTR90A 5 ** 99.0 Highly correlated
454 LTR91 5 *** 99.0 Highly correlated
455 MER11C 5 n.s 19.6 Weakly correlated
456 MER4B 5 n.s 74.0 Weakly correlated
457 MER51B 5 n.s 43.0 Weakly correlated
458 MER51E 5 ** 43.0 Weakly correlated
459 MER65D 5 n.s 87.0 Weakly correlated
460 MER67B 5 n.s 99.0 Highly correlated
461 MER73 5 * 87.0 Weakly correlated
462 MLT1G-int 5 * 99.0 Highly correlated
463 MLT2A1 5 n.s 74.0 Weakly correlated
464 MamGypLTR2c 5 n.s 99.0 Highly correlated
465 Mam_R4 5 * 99.0 Highly correlated
466 PABL_B 5 n.s 43.0 Weakly correlated
467 SVA_F 5 n.s 0.0 Weakly correlated
468 AluYk2 4 n.s 19.6 Weakly correlated
469 AluYk4 4 n.s 15.2 Weakly correlated
470 ERVL47-int 4 n.s 74.0 Weakly correlated
471 HERV16-int 4 n.s 99.0 Highly correlated
472 HERVK11D-int 4 * 19.6 Weakly correlated
473 HERVKC4-int 4 * 28.9 Weakly correlated
474 L1M2a 4 n.s 87.0 Weakly correlated
475 L1M2c 4 n.s 87.0 Weakly correlated
476 L1M3a 4 n.s 99.0 Highly correlated
477 LOR1-int 4 n.s 74.0 Weakly correlated
478 LTR10B 4 *** 28.9 Weakly correlated
479 LTR12F 4 n.s 28.9 Weakly correlated
480 LTR22B2 4 **** 28.9 Weakly correlated
481 LTR26D 4 * 0.0 Weakly correlated
482 LTR3 4 ** 28.9 Weakly correlated
483 LTR32 4 n.s 43.0 Weakly correlated
484 LTR33C 4 n.s 99.0 Highly correlated
485 LTR35 4 ** 43.0 Weakly correlated
486 LTR39 4 n.s 43.0 Weakly correlated
487 LTR45C 4 n.s 99.0 Highly correlated
488 LTR62 4 n.s 74.0 Weakly correlated
489 LTR68 4 n.s 99.0 Highly correlated
490 LTR6A 4 n.s 28.9 Weakly correlated
491 MER11A 4 n.s 28.9 Weakly correlated
492 MER21-int 4 n.s 99.0 Highly correlated
493 MER34-int 4 n.s 99.0 Highly correlated
494 MER41D 4 n.s 74.0 Weakly correlated
495 MER4CL34 4 n.s 43.0 Weakly correlated
496 MER61B 4 n.s 43.0 Weakly correlated
497 MER66A 4 n.s 43.0 Weakly correlated
498 MER74B 4 n.s 99.0 Highly correlated
499 MER92B 4 n.s 99.0 Highly correlated
500 MER95 4 ** 99.0 Highly correlated
501 MLT2B5 4 n.s 87.0 Weakly correlated
502 MLT2E 4 n.s 99.0 Highly correlated
503 MSTA1 4 n.s 74.0 Weakly correlated
504 MamGypLTR1a 4 n.s 99.0 Highly correlated
505 X9_LINE 4 * 319.0 Weakly correlated
506 HERV3-int 3 n.s 28.9 Weakly correlated
507 HERVIP10B3-int 3 n.s 28.9 Weakly correlated
508 HERVIP10F-int 3 n.s 28.9 Weakly correlated
509 HERVK3-int 3 n.s 28.9 Weakly correlated
510 HERVP71A-int 3 n.s 43.0 Weakly correlated
511 L1M 3 n.s 74.0 Weakly correlated
512 L1MEa 3 n.s 99.0 Highly correlated
513 L1MEg2 3 n.s 99.0 Highly correlated
514 L1P4d 3 n.s 74.0 Weakly correlated
515 L1PA8A 3 n.s 74.0 Weakly correlated
516 LOR1a 3 n.s 74.0 Weakly correlated
517 LTR06 3 ** 74.0 Weakly correlated
518 LTR103_Mam 3 n.s 99.0 Highly correlated
519 LTR103b_Mam 3 n.s 99.0 Highly correlated
520 LTR12 3 n.s 28.9 Weakly correlated
521 LTR12D 3 n.s 19.6 Weakly correlated
522 LTR13A 3 n.s 28.9 Weakly correlated
523 LTR16D2 3 n.s 99.0 Highly correlated
524 LTR22C0 3 * 28.9 Weakly correlated
525 LTR24B 3 n.s 74.0 Weakly correlated
526 LTR26C 3 n.s 0.0 Weakly correlated
527 LTR29 3 n.s 43.0 Weakly correlated
528 LTR43B 3 n.s 74.0 Weakly correlated
529 LTR47B4 3 * 74.0 Weakly correlated
530 LTR5A 3 n.s 19.6 Weakly correlated
531 LTR5B 3 n.s 28.9 Weakly correlated
532 LTR61 3 n.s 43.0 Weakly correlated
533 LTR69 3 * 99.0 Highly correlated
534 LTR71A 3 n.s 43.0 Weakly correlated
535 LTR86B1 3 n.s 99.0 Highly correlated
536 MER110-int 3 n.s 99.0 Highly correlated
537 MER34B-int 3 n.s 99.0 Highly correlated
538 MER50C 3 ** 43.0 Weakly correlated
539 MER52-int 3 n.s 99.0 Highly correlated
540 MER57A-int 3 n.s 43.0 Weakly correlated
541 MER57E1 3 n.s 87.0 Weakly correlated
542 MER57F 3 n.s 74.0 Weakly correlated
543 MER61C 3 n.s 43.0 Weakly correlated
544 MER61D 3 n.s 43.0 Weakly correlated
545 MER66-int 3 n.s 43.0 Weakly correlated
546 MER70A 3 n.s 87.0 Weakly correlated
547 MER72B 3 n.s 43.0 Weakly correlated
548 MER87B 3 n.s 74.0 Weakly correlated
549 MER92C 3 ** 99.0 Highly correlated
550 MLT1A1-int 3 n.s 87.0 Weakly correlated
551 MLT1B-int 3 n.s 99.0 Highly correlated
552 MLT1F1-int 3 n.s 99.0 Highly correlated
553 MLT1F2-int 3 n.s 99.0 Highly correlated
554 MLT1I-int 3 n.s 99.0 Highly correlated
555 PABL_A-int 3 n.s 74.0 Weakly correlated
556 THE1B-int 3 n.s 43.0 Weakly correlated
557 AluYb9 2 n.s 15.2 Weakly correlated
558 AluYh9 2 ** 15.2 Weakly correlated
559 AluYk12 2 n.s 15.2 Weakly correlated
560 HERV4_I-int 2 n.s 43.0 Weakly correlated
561 HERV9NC-int 2 n.s 19.6 Weakly correlated
562 HERVK11-int 2 n.s 28.9 Weakly correlated
563 L1M2b 2 n.s 87.0 Weakly correlated
564 L1M3d 2 n.s 99.0 Highly correlated
565 L1P4b 2 n.s 74.0 Weakly correlated
566 L2-1_Crp 2 *** 319.0 Weakly correlated
567 LTR1 2 n.s 43.0 Weakly correlated
568 LTR102_Mam 2 n.s 99.0 Highly correlated
569 LTR105_Mam 2 n.s 99.0 Highly correlated
570 LTR106_Mam 2 n.s 99.0 Highly correlated
571 LTR107_Mam 2 n.s 99.0 Highly correlated
572 LTR108d_Mam 2 * 99.0 Highly correlated
573 LTR10B2 2 * 28.9 Weakly correlated
574 LTR1A1 2 n.s 43.0 Weakly correlated
575 LTR1C1 2 n.s 43.0 Weakly correlated
576 LTR1D1 2 n.s 43.0 Weakly correlated
577 LTR22B 2 n.s 28.9 Weakly correlated
578 LTR26B 2 n.s 74.0 Weakly correlated
579 LTR27 2 n.s 43.0 Weakly correlated
580 LTR27C 2 n.s 43.0 Weakly correlated
581 LTR2C 2 n.s 19.6 Weakly correlated
582 LTR34 2 n.s 74.0 Weakly correlated
583 LTR43-int 2 n.s 74.0 Weakly correlated
584 LTR47A2 2 n.s 74.0 Weakly correlated
585 LTR49 2 n.s 74.0 Weakly correlated
586 LTR53-int 2 n.s 99.0 Highly correlated
587 LTR57 2 n.s 74.0 Weakly correlated
588 LTR60 2 ** 43.0 Weakly correlated
589 LTR60B 2 n.s 74.0 Weakly correlated
590 LTR7C 2 n.s 28.9 Weakly correlated
591 LTR86C 2 n.s 99.0 Highly correlated
592 MER129 2 * 319.0 Weakly correlated
593 MER41-int 2 n.s 74.0 Weakly correlated
594 MER41E 2 n.s 74.0 Weakly correlated
595 MER48 2 n.s 28.9 Weakly correlated
596 MER4A1_ 2 n.s 74.0 Weakly correlated
597 MER4D0 2 n.s 74.0 Weakly correlated
598 MER57B1 2 n.s 43.0 Weakly correlated
599 MER57C2 2 n.s 87.0 Weakly correlated
600 MER57D 2 n.s 87.0 Weakly correlated
601 MER61E 2 n.s 43.0 Weakly correlated
602 MER61F 2 n.s 43.0 Weakly correlated
603 MER65B 2 n.s 74.0 Weakly correlated
604 MER68-int 2 n.s 99.0 Highly correlated
605 MER70B 2 n.s 87.0 Weakly correlated
606 MER74C 2 n.s 99.0 Highly correlated
607 MER84 2 n.s 43.0 Weakly correlated
608 MER89-int 2 n.s 99.0 Highly correlated
609 MER9a1 2 n.s 19.6 Weakly correlated
610 MLT-int 2 n.s 99.0 Highly correlated
611 MLT1H-int 2 n.s 99.0 Highly correlated
612 MLT1H2-int 2 n.s 99.0 Highly correlated
613 MLT1J1-int 2 n.s 99.0 Highly correlated
614 MLT2B2 2 n.s 99.0 Highly correlated
615 MSTA-int 2 n.s 43.0 Weakly correlated
616 MSTB-int 2 n.s 43.0 Weakly correlated
617 MamGypLTR1d 2 n.s 99.0 Highly correlated
618 PABL_B-int 2 n.s 74.0 Weakly correlated
619 THE1A 2 n.s 43.0 Weakly correlated
620 THE1A-int 2 n.s 43.0 Weakly correlated
621 THE1D-int 2 n.s 28.9 Weakly correlated
622 X2_LINE 2 * 319.0 Weakly correlated
623 X8_LINE 2 * 319.0 Weakly correlated
624 AluYd8 1 n.s 15.2 Weakly correlated
625 AluYh3a3 1 n.s 15.2 Weakly correlated
626 HERV1_LTRa 1 * 28.9 Weakly correlated
627 HERV1_LTRd 1 ** 43.0 Weakly correlated
628 HERV30-int 1 n.s 28.9 Weakly correlated
629 HERV9-int 1 n.s 28.9 Weakly correlated
630 HERVK9-int 1 n.s 28.9 Weakly correlated
631 HUERS-P2-int 1 n.s 43.0 Weakly correlated
632 L1M3b 1 n.s 99.0 Highly correlated
633 L1MEg1 1 n.s 99.0 Highly correlated
634 LTR14 1 n.s 28.9 Weakly correlated
635 LTR14A 1 n.s 28.9 Weakly correlated
636 LTR14C 1 n.s 28.9 Weakly correlated
637 LTR17 1 n.s 28.9 Weakly correlated
638 LTR1B 1 n.s 43.0 Weakly correlated
639 LTR1C3 1 n.s 43.0 Weakly correlated
640 LTR22 1 n.s 28.9 Weakly correlated
641 LTR22A 1 n.s 43.0 Weakly correlated
642 LTR22E 1 n.s 28.9 Weakly correlated
643 LTR23-int 1 n.s 74.0 Weakly correlated
644 LTR24C 1 n.s 74.0 Weakly correlated
645 LTR28C 1 n.s 43.0 Weakly correlated
646 LTR30 1 n.s 28.9 Weakly correlated
647 LTR38 1 n.s 74.0 Weakly correlated
648 LTR3A 1 n.s 28.9 Weakly correlated
649 LTR47A 1 n.s 74.0 Weakly correlated
650 LTR47B3 1 n.s 74.0 Weakly correlated
651 LTR48B 1 n.s 74.0 Weakly correlated
652 LTR53B 1 n.s 99.0 Highly correlated
653 LTR57-int 1 n.s 74.0 Weakly correlated
654 LTR6B 1 n.s 19.6 Weakly correlated
655 LTR72B 1 n.s 74.0 Weakly correlated
656 LTR80A 1 n.s 99.0 Highly correlated
657 LTR81AB 1 n.s 99.0 Highly correlated
658 LTR81C 1 n.s 99.0 Highly correlated
659 LTR86A2 1 n.s 99.0 Highly correlated
660 LTR90B 1 n.s 99.0 Highly correlated
661 LTR9A1 1 n.s 43.0 Weakly correlated
662 LTR9D 1 n.s 43.0 Weakly correlated
663 MER34C 1 n.s 87.0 Weakly correlated
664 MER34C_ 1 n.s 87.0 Weakly correlated
665 MER4E1 1 n.s 74.0 Weakly correlated
666 MER50B 1 n.s 43.0 Weakly correlated
667 MER57E2 1 n.s 87.0 Weakly correlated
668 MER70C 1 n.s 99.0 Highly correlated
669 MER83B-int 1 n.s 99.0 Highly correlated
670 MER83C 1 n.s 43.0 Weakly correlated
671 MER92A 1 n.s 99.0 Highly correlated
672 MLT1-int 1 n.s 99.0 Highly correlated
673 MLT1A-int 1 n.s 99.0 Highly correlated
674 MLT1A0-int 1 n.s 99.0 Highly correlated
675 MLT1E 1 n.s 99.0 Highly correlated
676 MLT1E1 1 n.s 99.0 Highly correlated
677 MLT1E1A-int 1 n.s 99.0 Highly correlated
678 MLT1K-int 1 n.s 99.0 Highly correlated
679 PRIMA41-int 1 n.s 74.0 Weakly correlated
680 PRIMA4_LTR 1 n.s 74.0 Weakly correlated
681 THE1C-int 1 n.s 43.0 Weakly correlated
682 UCON49 1 * 0.0 Weakly correlated
683 UCON51 1 ** 319.0 Weakly correlated
684 UCON86 1 * 319.0 Weakly correlated
685 X5B_LINE 1 ** 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluSx 263 n.s 74.0 Weakly correlated
2 AluSx1 245 n.s 74.0 Weakly correlated
3 AluSz 200 n.s 74.0 Weakly correlated
4 AluJb 192 n.s 74.0 Weakly correlated
5 AluY 186 n.s 74.0 Weakly correlated
6 AluSq2 120 n.s 74.0 Weakly correlated
7 AluJr 110 n.s 74.0 Weakly correlated
8 L2c 109 n.s 99.0 Highly correlated
9 AluSp 104 n.s 74.0 Weakly correlated
10 AluJo 100 n.s 74.0 Weakly correlated
11 L2a 95 n.s 99.0 Highly correlated
12 AluSg 83 n.s 74.0 Weakly correlated
13 AluSz6 81 n.s 74.0 Weakly correlated
14 MIRb 74 n.s 99.0 Highly correlated
15 L2b 72 n.s 99.0 Highly correlated
16 AluSc 69 n.s 74.0 Weakly correlated
17 AluSx3 65 n.s 74.0 Weakly correlated
18 MIRc 58 n.s 99.0 Highly correlated
19 MIR 50 n.s 99.0 Highly correlated
20 L2 49 n.s 99.0 Highly correlated
21 MIR3 45 n.s 99.0 Highly correlated
22 FLAM_C 39 n.s 74.0 Weakly correlated
23 AluSq 36 n.s 74.0 Weakly correlated
24 AluSc8 27 n.s 74.0 Weakly correlated
25 L3 23 n.s 99.0 Highly correlated
26 AluSg4 22 n.s 74.0 Weakly correlated
27 LTR13 22 *** 19.6 Weakly correlated
28 AluSx4 18 n.s 74.0 Weakly correlated
29 AluSc5 16 n.s 74.0 Weakly correlated
30 LTR10F 16 **** 28.9 Weakly correlated
31 LTR8B 16 n.s 43.0 Weakly correlated
32 AluJr4 14 n.s 74.0 Weakly correlated
33 AluSg7 13 n.s 74.0 Weakly correlated
34 FRAM 13 n.s 74.0 Weakly correlated
35 L3b 13 n.s 99.0 Highly correlated
36 LTR10A 13 **** 28.9 Weakly correlated
37 MLT1H 13 n.s 99.0 Highly correlated
38 MLT1K 13 n.s 99.0 Highly correlated
39 MamRTE1 13 n.s 99.0 Highly correlated
40 MLT1C 11 n.s 94.0 Weakly correlated
41 MLT1I 11 n.s 99.0 Highly correlated
42 ERVL-B4-int 10 n.s 99.0 Highly correlated
43 LTR8 10 n.s 43.0 Weakly correlated
44 MER21C 10 n.s 99.0 Highly correlated
45 MLT1G 10 n.s 99.0 Highly correlated
46 ERVL-E-int 9 n.s 99.0 Highly correlated
47 L1MB8 9 n.s 99.0 Highly correlated
48 MamSINE1 9 n.s 99.0 Highly correlated
49 AluYf1 8 n.s 19.6 Weakly correlated
50 ERV3-16A3_I-int 8 n.s 99.0 Highly correlated
51 LTR16A1 8 n.s 99.0 Highly correlated
52 MIR1_Amn 8 n.s 319.0 Weakly correlated
53 MLT1F 8 n.s 99.0 Highly correlated
54 MLT1F1 8 n.s 99.0 Highly correlated
55 Alu 7 n.s 74.0 Weakly correlated
56 AluYa5 7 n.s 15.2 Weakly correlated
57 AluYc 7 n.s 74.0 Weakly correlated
58 AmnSINE1 7 n.s 319.0 Weakly correlated
59 L1MB7 7 n.s 99.0 Highly correlated
60 L1ME1 7 n.s 99.0 Highly correlated
61 LTR18A 7 **** 43.0 Weakly correlated
62 LTR18B 7 * 43.0 Weakly correlated
63 MER68 7 n.s 99.0 Highly correlated
64 MLT1F2 7 n.s 99.0 Highly correlated
65 MLT1J 7 n.s 99.0 Highly correlated
66 MamRep605 7 n.s 99.0 Highly correlated
67 AluSq10 6 n.s 74.0 Weakly correlated
68 HAL1 6 n.s 99.0 Highly correlated
69 L1M5 6 n.s 99.0 Highly correlated
70 L1ME3G 6 n.s 99.0 Highly correlated
71 L1MEd 6 n.s 99.0 Highly correlated
72 LTR26 6 n.s 74.0 Weakly correlated
73 LTR33 6 n.s 99.0 Highly correlated
74 MLT1D 6 n.s 99.0 Highly correlated
75 MLT1J2 6 n.s 99.0 Highly correlated
76 MLT1L 6 n.s 99.0 Highly correlated
77 L1MB3 5 n.s 99.0 Highly correlated
78 L1MC3 5 n.s 99.0 Highly correlated
79 L1MD3 5 n.s 99.0 Highly correlated
80 L4_A_Mam 5 n.s 99.0 Highly correlated
81 L4_C_Mam 5 n.s 99.0 Highly correlated
82 LFSINE_Vert 5 n.s 319.0 Weakly correlated
83 LTR16 5 n.s 99.0 Highly correlated
84 LTR16A 5 n.s 99.0 Highly correlated
85 LTR72 5 ** 74.0 Weakly correlated
86 LTR78 5 n.s 99.0 Highly correlated
87 MER4C 5 n.s 74.0 Weakly correlated
88 MLT1G1 5 n.s 99.0 Highly correlated
89 AluSq4 4 n.s 74.0 Weakly correlated
90 L1M4 4 n.s 99.0 Highly correlated
91 L1MC4 4 n.s 99.0 Highly correlated
92 L1MEc 4 n.s 99.0 Highly correlated
93 MLT1G3 4 n.s 99.0 Highly correlated
94 MLT1J-int 4 n.s 99.0 Highly correlated
95 MLT1N2 4 n.s 99.0 Highly correlated
96 Plat_L3 4 n.s 99.0 Highly correlated
97 AluYb8 3 n.s 15.2 Weakly correlated
98 AluYe5 3 n.s 74.0 Weakly correlated
99 AluYi6 3 n.s 15.2 Weakly correlated
100 AluYj4 3 n.s 0.0 Weakly correlated
101 AluYk11 3 n.s 15.2 Weakly correlated
102 FLAM_A 3 n.s 74.0 Weakly correlated
103 HERVK13-int 3 n.s 19.6 Weakly correlated
104 L1M4b 3 n.s 99.0 Highly correlated
105 L1MA9 3 n.s 99.0 Highly correlated
106 L1MD2 3 n.s 99.0 Highly correlated
107 L1ME2z 3 n.s 99.0 Highly correlated
108 L1ME3Cz 3 n.s 99.0 Highly correlated
109 L1ME4b 3 n.s 99.0 Highly correlated
110 L1MEg 3 n.s 99.0 Highly correlated
111 L1PB1 3 n.s 74.0 Weakly correlated
112 L2-1_AMi 3 n.s 319.0 Weakly correlated
113 LTR13_ 3 * 28.9 Weakly correlated
114 LTR44 3 n.s 74.0 Weakly correlated
115 LTR64 3 n.s 74.0 Weakly correlated
116 LTR8A 3 n.s 43.0 Weakly correlated
117 MER21B 3 n.s 99.0 Highly correlated
118 MER76 3 n.s 99.0 Highly correlated
119 MER77 3 n.s 99.0 Highly correlated
120 MER77B 3 n.s 99.0 Highly correlated
121 MLT1B 3 n.s 99.0 Highly correlated
122 MLT1E1A 3 n.s 99.0 Highly correlated
123 MLT1H2 3 n.s 99.0 Highly correlated
124 MSTB1 3 n.s 74.0 Weakly correlated
125 MamGypLTR3a 3 n.s 99.0 Highly correlated
126 SVA_A 3 n.s 19.6 Weakly correlated
127 AluYh3 2 n.s 15.2 Weakly correlated
128 AluYk2 2 n.s 19.6 Weakly correlated
129 AluYk3 2 n.s 19.6 Weakly correlated
130 CR1-16_AMi 2 n.s 319.0 Weakly correlated
131 CR1-3_Croc 2 n.s 319.0 Weakly correlated
132 ERVL-int 2 n.s 99.0 Highly correlated
133 HAL1ME 2 n.s 99.0 Highly correlated
134 HERVK-int 2 n.s 28.9 Weakly correlated
135 HERVL40-int 2 n.s 99.0 Highly correlated
136 L1M2 2 n.s 99.0 Highly correlated
137 L1M3f 2 n.s 87.0 Weakly correlated
138 L1MA4A 2 n.s 87.0 Weakly correlated
139 L1MA5 2 n.s 87.0 Weakly correlated
140 L1MB2 2 n.s 99.0 Highly correlated
141 L1MCa 2 n.s 99.0 Highly correlated
142 L1MD 2 n.s 99.0 Highly correlated
143 L1ME3A 2 n.s 99.0 Highly correlated
144 L1ME4a 2 n.s 99.0 Highly correlated
145 L1PA2 2 n.s 15.2 Weakly correlated
146 L2-3_Crp 2 n.s 431.0 Weakly correlated
147 LTR1 2 n.s 43.0 Weakly correlated
148 LTR106_Mam 2 n.s 99.0 Highly correlated
149 LTR16D 2 n.s 99.0 Highly correlated
150 LTR16E1 2 n.s 99.0 Highly correlated
151 LTR76 2 n.s 74.0 Weakly correlated
152 LTR87 2 n.s 99.0 Highly correlated
153 MER31-int 2 n.s 99.0 Highly correlated
154 MER41A 2 n.s 74.0 Weakly correlated
155 MER41G 2 n.s 74.0 Weakly correlated
156 MER50-int 2 n.s 43.0 Weakly correlated
157 MER57F 2 n.s 74.0 Weakly correlated
158 MER74A 2 n.s 99.0 Highly correlated
159 MLT1O 2 n.s 99.0 Highly correlated
160 MLT2B3 2 n.s 99.0 Highly correlated
161 MLT2B5 2 n.s 87.0 Weakly correlated
162 MLT2D 2 n.s 99.0 Highly correlated
163 MLT2F 2 n.s 99.0 Highly correlated
164 MSTB2 2 n.s 74.0 Weakly correlated
165 MamGypsy2-I 2 n.s 99.0 Highly correlated
166 AluYb9 1 n.s 15.2 Weakly correlated
167 AluYd8 1 n.s 15.2 Weakly correlated
168 CR1-L3A_Croc 1 n.s 319.0 Weakly correlated
169 CR1_Mam 1 n.s 99.0 Highly correlated
170 ERV24B_Prim-int 1 n.s 74.0 Weakly correlated
171 ERV24_Prim-int 1 n.s 74.0 Weakly correlated
172 HAL1b 1 n.s 99.0 Highly correlated
173 HERVE-int 1 n.s 19.6 Weakly correlated
174 HERVK11-int 1 n.s 28.9 Weakly correlated
175 HERVL-int 1 n.s 74.0 Weakly correlated
176 L1M1 1 n.s 74.0 Weakly correlated
177 L1M2b 1 n.s 87.0 Weakly correlated
178 L1M4a1 1 n.s 99.0 Highly correlated
179 L1M4a2 1 n.s 99.0 Highly correlated
180 L1M6B 1 n.s 99.0 Highly correlated
181 L1MA3 1 n.s 74.0 Weakly correlated
182 L1MA5A 1 n.s 87.0 Weakly correlated
183 L1MA6 1 n.s 87.0 Weakly correlated
184 L1MB4 1 n.s 99.0 Highly correlated
185 L1MB5 1 n.s 99.0 Highly correlated
186 L1MC1 1 n.s 99.0 Highly correlated
187 L1MC4a 1 n.s 99.0 Highly correlated
188 L1MC5a 1 n.s 99.0 Highly correlated
189 L1MCb 1 n.s 99.0 Highly correlated
190 L1MDa 1 n.s 99.0 Highly correlated
191 L1ME2 1 n.s 99.0 Highly correlated
192 L1ME3 1 n.s 99.0 Highly correlated
193 L1ME3B 1 n.s 99.0 Highly correlated
194 L1ME3F 1 n.s 99.0 Highly correlated
195 L1ME4c 1 n.s 99.0 Highly correlated
196 L1MEf 1 n.s 99.0 Highly correlated
197 L1MEh 1 n.s 99.0 Highly correlated
198 L1MEi 1 n.s 99.0 Highly correlated
199 L1PA10 1 n.s 74.0 Weakly correlated
200 L1PA16 1 n.s 74.0 Weakly correlated
201 L1PA5 1 n.s 19.6 Weakly correlated
202 L1PA7 1 n.s 74.0 Weakly correlated
203 L1PB3 1 n.s 74.0 Weakly correlated
204 L1PB4 1 n.s 99.0 Highly correlated
205 L1PBa 1 n.s 74.0 Weakly correlated
206 L1PBa1 1 n.s 74.0 Weakly correlated
207 L1PREC2 1 n.s 43.0 Weakly correlated
208 L2-1_Crp 1 ** 319.0 Weakly correlated
209 LTR13A 1 n.s 28.9 Weakly correlated
210 LTR16A2 1 n.s 99.0 Highly correlated
211 LTR16B 1 n.s 99.0 Highly correlated
212 LTR16C 1 n.s 99.0 Highly correlated
213 LTR16D1 1 n.s 99.0 Highly correlated
214 LTR16D2 1 n.s 99.0 Highly correlated
215 LTR16E2 1 n.s 99.0 Highly correlated
216 LTR23 1 n.s 74.0 Weakly correlated
217 LTR24 1 n.s 74.0 Weakly correlated
218 LTR25 1 n.s 43.0 Weakly correlated
219 LTR33B 1 n.s 99.0 Highly correlated
220 LTR34 1 n.s 74.0 Weakly correlated
221 LTR37-int 1 n.s 99.0 Highly correlated
222 LTR38 1 n.s 74.0 Weakly correlated
223 LTR3B 1 n.s 28.9 Weakly correlated
224 LTR40A1 1 n.s 99.0 Highly correlated
225 LTR40b 1 n.s 99.0 Highly correlated
226 LTR40c 1 n.s 99.0 Highly correlated
227 LTR41 1 n.s 99.0 Highly correlated
228 LTR41B 1 n.s 99.0 Highly correlated
229 LTR41C 1 n.s 99.0 Highly correlated
230 LTR43 1 n.s 74.0 Weakly correlated
231 LTR43-int 1 n.s 74.0 Weakly correlated
232 LTR45B 1 n.s 74.0 Weakly correlated
233 LTR47B3 1 n.s 74.0 Weakly correlated
234 LTR47B4 1 n.s 74.0 Weakly correlated
235 LTR49-int 1 n.s 74.0 Weakly correlated
236 LTR51 1 n.s 74.0 Weakly correlated
237 LTR53 1 n.s 99.0 Highly correlated
238 LTR54 1 n.s 74.0 Weakly correlated
239 LTR57 1 n.s 74.0 Weakly correlated
240 LTR57-int 1 n.s 74.0 Weakly correlated
241 LTR5_Hs 1 n.s 0.0 Weakly correlated
242 LTR67B 1 n.s 99.0 Highly correlated
243 LTR78B 1 n.s 99.0 Highly correlated
244 LTR79 1 n.s 99.0 Highly correlated
245 LTR7C 1 n.s 28.9 Weakly correlated
246 LTR81 1 n.s 99.0 Highly correlated
247 LTR81A 1 n.s 99.0 Highly correlated
248 LTR81C 1 n.s 99.0 Highly correlated
249 LTR83 1 n.s 99.0 Highly correlated
250 LTR85c 1 n.s 99.0 Highly correlated
251 LTR88b 1 n.s 99.0 Highly correlated
252 LTR90A 1 n.s 99.0 Highly correlated
253 LTR90B 1 n.s 99.0 Highly correlated
254 LTR9B 1 n.s 43.0 Weakly correlated
255 MER110-int 1 n.s 99.0 Highly correlated
256 MER11A 1 n.s 28.9 Weakly correlated
257 MER21-int 1 n.s 99.0 Highly correlated
258 MER34B 1 n.s 87.0 Weakly correlated
259 MER39 1 n.s 74.0 Weakly correlated
260 MER49 1 n.s 43.0 Weakly correlated
261 MER4B-int 1 n.s 99.0 Highly correlated
262 MER4CL34 1 n.s 43.0 Weakly correlated
263 MER4D0 1 n.s 74.0 Weakly correlated
264 MER54A 1 n.s 87.0 Weakly correlated
265 MER57E1 1 n.s 87.0 Weakly correlated
266 MER65-int 1 n.s 87.0 Weakly correlated
267 MER65A 1 n.s 74.0 Weakly correlated
268 MER65C 1 n.s 74.0 Weakly correlated
269 MER65D 1 n.s 87.0 Weakly correlated
270 MER66B 1 n.s 43.0 Weakly correlated
271 MER67C 1 n.s 99.0 Highly correlated
272 MER67D 1 n.s 99.0 Highly correlated
273 MER68B 1 n.s 99.0 Highly correlated
274 MER89 1 n.s 99.0 Highly correlated
275 MER90 1 n.s 99.0 Highly correlated
276 MER92C 1 n.s 99.0 Highly correlated
277 MLT1A 1 n.s 99.0 Highly correlated
278 MLT1A-int 1 n.s 99.0 Highly correlated
279 MLT1A1 1 n.s 87.0 Weakly correlated
280 MLT1B-int 1 n.s 99.0 Highly correlated
281 MLT1C-int 1 n.s 94.0 Weakly correlated
282 MLT1D-int 1 n.s 99.0 Highly correlated
283 MLT1E1A-int 1 n.s 99.0 Highly correlated
284 MLT1E2 1 n.s 99.0 Highly correlated
285 MLT1H-int 1 n.s 99.0 Highly correlated
286 MLT1J1 1 n.s 99.0 Highly correlated
287 MLT1J1-int 1 n.s 99.0 Highly correlated
288 MLT1M 1 n.s 99.0 Highly correlated
289 MLT2A2 1 n.s 74.0 Weakly correlated
290 MLT2B1 1 n.s 99.0 Highly correlated
291 MLT2B4 1 n.s 99.0 Highly correlated
292 MLT2C1 1 n.s 99.0 Highly correlated
293 MSTA 1 n.s 43.0 Weakly correlated
294 MSTB 1 n.s 43.0 Weakly correlated
295 MSTD 1 n.s 74.0 Weakly correlated
296 MamGypLTR1a 1 n.s 99.0 Highly correlated
297 MamGypLTR1b 1 n.s 99.0 Highly correlated
298 MamGypLTR2c 1 n.s 99.0 Highly correlated
299 PABL_A-int 1 n.s 74.0 Weakly correlated
300 Penelope1_Vert 1 n.s 319.0 Weakly correlated
301 SVA_B 1 n.s 15.2 Weakly correlated
302 THE1B 1 n.s 43.0 Weakly correlated
303 THE1D 1 n.s 43.0 Weakly correlated
304 X6A_LINE 1 n.s 99.0 Highly correlated
305 X6B_LINE 1 n.s 99.0 Highly correlated
306 X9_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUJB 74.0 Weakly correlated
2 ALUJO 74.0 Weakly correlated
3 ALUJR 74.0 Weakly correlated
4 ALUJR4 74.0 Weakly correlated
5 ALUSC 74.0 Weakly correlated
6 ALUSC5 74.0 Weakly correlated
7 ALUSC8 74.0 Weakly correlated
8 ALUSG 74.0 Weakly correlated
9 ALUSG4 74.0 Weakly correlated
10 ALUSG7 74.0 Weakly correlated
11 ALUSP 74.0 Weakly correlated
12 ALUSQ 74.0 Weakly correlated
13 ALUSQ10 74.0 Weakly correlated
14 ALUSQ2 74.0 Weakly correlated
15 ALUSX 74.0 Weakly correlated
16 ALUSX1 74.0 Weakly correlated
17 ALUSX3 74.0 Weakly correlated
18 ALUSX4 74.0 Weakly correlated
19 ALUSZ 74.0 Weakly correlated
20 ALUSZ6 74.0 Weakly correlated
21 ALUY 74.0 Weakly correlated
22 ALUYA5 15.2 Weakly correlated
23 ALUYC 74.0 Weakly correlated
24 ALUYF1 19.6 Weakly correlated
25 ERV3-16A3_I-INT 99.0 Highly correlated
26 ERVL-B4-INT 99.0 Highly correlated
27 ERVL-E-INT 99.0 Highly correlated
28 FLAM_C 74.0 Weakly correlated
29 HAL1 99.0 Highly correlated
30 L1M5 99.0 Highly correlated
31 L1MB7 99.0 Highly correlated
32 L1MED 99.0 Highly correlated
33 L2 99.0 Highly correlated
34 L3 99.0 Highly correlated
35 LTR10A 28.9 Weakly correlated
36 LTR10F 28.9 Weakly correlated
37 LTR13 19.6 Weakly correlated
38 LTR18B 43.0 Weakly correlated
39 LTR26 74.0 Weakly correlated
40 LTR8 43.0 Weakly correlated
41 LTR8B 43.0 Weakly correlated
42 MER68 99.0 Highly correlated
43 MLT1C 94.0 Weakly correlated
44 MLT1F 99.0 Highly correlated
45 MLT1F2 99.0 Highly correlated
46 MLT1G 99.0 Highly correlated
47 MLT1I 99.0 Highly correlated
48 MLT1J 99.0 Highly correlated
49 MAMRTE1 99.0 Highly correlated
50 MAMREP605 99.0 Highly correlated