ZRdb KZFP & Repeats
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Human_ZNF597

  • Protein
    Zinc finger protein 597
  • Length
    424
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    94.0 Mya
  • Uniprot_ID
    Q96LX8
  • NCBI_ID
    146434
Sequence:
MASMPPTPEAQGPILFEDLAVYFSQEECVTLHPAQRSLSKDGTKESLEDAALMGEEGKPEINQQLSLESMELDELALEKYPIAAPLVPYPEKSSEDGVGNPEAKILSGTPTYKRRVISLLVTIENHTPLVELSEYLGTNTLSEILDSPWEGAKNVYKCPECDQNFSDHSYLVLHQKIHSGEKKHKCGDCGKIFNHRANLRTHRRIHTGEKPYKCAKCSASFRQHSHLSRHMNSHVKEKPYTCSICGRGFMWLPGLAQHQKSHSAENTYESTNCDKHFNEKPNLALPEETFVSGPQYQHTKCMKSFRQSLYPALSEKSHDEDSERCSDDGDNFFSFSKFKPLQCPDCDMTFPCFSELISHQNIHTEERPHKCKTCEESFALDSELACHQKSHMLAEPFKCTVCGKTFKSNLHLITHKRTHIKNTT
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
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# Domain name Pos
1 KRAB 14..88
2 C2h2 156..178
3 C2h2 184..206
4 C2h2 212..234
5 C2h2 240..262
6 C2h2 341..363
7 C2h2 369..391
8 C2h2 397..419
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription activator activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Molecular Function sequence-specific double-stranded DNA binding
6 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 472 **** 99.0 Moderately correlated
2 L2a 330 **** 99.0 Moderately correlated
3 MIR3 291 **** 99.0 Moderately correlated
4 L2c 277 **** 99.0 Moderately correlated
5 MIR 273 **** 99.0 Moderately correlated
6 MIRc 253 **** 99.0 Moderately correlated
7 L2b 208 **** 99.0 Moderately correlated
8 THE1B 158 **** 43.0 Weakly correlated
9 L2 155 **** 99.0 Moderately correlated
10 AluSx 152 n.s 74.0 Weakly correlated
11 AluJb 136 n.s 74.0 Weakly correlated
12 AluSx1 120 n.s 74.0 Weakly correlated
13 AluSz 109 n.s 74.0 Weakly correlated
14 L3 102 **** 99.0 Moderately correlated
15 THE1C 74 **** 43.0 Weakly correlated
16 AluJr 71 n.s 74.0 Weakly correlated
17 AluJo 67 n.s 74.0 Weakly correlated
18 MLT1K 63 **** 99.0 Moderately correlated
19 AluSp 60 n.s 74.0 Weakly correlated
20 HAL1 60 n.s 99.0 Moderately correlated
21 L1MB7 56 n.s 99.0 Moderately correlated
22 L1MB3 54 n.s 99.0 Moderately correlated
23 L1ME1 52 n.s 99.0 Moderately correlated
24 AluSq2 51 n.s 74.0 Weakly correlated
25 AluSz6 51 n.s 74.0 Weakly correlated
26 AluY 47 n.s 74.0 Weakly correlated
27 MIR1_Amn 47 **** 319.0 Weakly correlated
28 L1MB2 42 *** 99.0 Moderately correlated
29 L1MEd 41 n.s 99.0 Moderately correlated
30 AluSg 40 n.s 74.0 Weakly correlated
31 THE1D 38 ** 43.0 Weakly correlated
32 MLT1I 34 **** 99.0 Moderately correlated
33 MSTA 33 n.s 43.0 Weakly correlated
34 L1M5 32 n.s 99.0 Moderately correlated
35 L1ME4b 32 n.s 99.0 Moderately correlated
36 MLT1H 32 *** 99.0 Moderately correlated
37 MLT1L 32 **** 99.0 Moderately correlated
38 LTR13 31 **** 19.6 Weakly correlated
39 L1M4 30 n.s 99.0 Moderately correlated
40 L1MC4 30 n.s 99.0 Moderately correlated
41 MER21C 29 *** 99.0 Moderately correlated
42 L1MB8 28 n.s 99.0 Moderately correlated
43 L1ME3A 28 n.s 99.0 Moderately correlated
44 MLT1N2 28 **** 99.0 Moderately correlated
45 AmnSINE1 27 **** 319.0 Weakly correlated
46 MLT1D 27 n.s 99.0 Moderately correlated
47 AluSx3 26 n.s 74.0 Weakly correlated
48 L1MA9 26 n.s 99.0 Moderately correlated
49 L1ME4a 26 n.s 99.0 Moderately correlated
50 MLT1C 26 n.s 94.0 Highly correlated
51 AluSc 25 n.s 74.0 Weakly correlated
52 L1MB4 25 n.s 99.0 Moderately correlated
53 MLT1F 25 **** 99.0 Moderately correlated
54 LTR8 24 **** 43.0 Weakly correlated
55 L1MC1 23 n.s 99.0 Moderately correlated
56 L1MCa 23 n.s 99.0 Moderately correlated
57 MamRTE1 23 **** 99.0 Moderately correlated
58 FLAM_C 22 n.s 74.0 Weakly correlated
59 AluSc8 21 n.s 74.0 Weakly correlated
60 ERVL-E-int 21 n.s 99.0 Moderately correlated
61 L1MD2 21 n.s 99.0 Moderately correlated
62 L3b 21 *** 99.0 Moderately correlated
63 MER74A 21 **** 99.0 Moderately correlated
64 MLT1J 21 n.s 99.0 Moderately correlated
65 L1MC3 20 n.s 99.0 Moderately correlated
66 L1ME3G 20 n.s 99.0 Moderately correlated
67 LTR43 20 **** 74.0 Weakly correlated
68 MLT1B 20 n.s 99.0 Moderately correlated
69 MLT1F2 20 * 99.0 Moderately correlated
70 AluSq 19 n.s 74.0 Weakly correlated
71 L1M1 19 n.s 74.0 Weakly correlated
72 L1MB5 18 n.s 99.0 Moderately correlated
73 L1MC5a 18 n.s 99.0 Moderately correlated
74 L1PA7 18 n.s 74.0 Weakly correlated
75 LTR16C 18 * 99.0 Moderately correlated
76 LTR2B 18 **** 19.6 Weakly correlated
77 HERVE-int 17 **** 19.6 Weakly correlated
78 L1MEf 17 n.s 99.0 Moderately correlated
79 L1MEg 17 n.s 99.0 Moderately correlated
80 L1MC5 16 n.s 99.0 Moderately correlated
81 L1MEc 16 n.s 99.0 Moderately correlated
82 MLT1J2 16 * 99.0 Moderately correlated
83 L1MC2 15 n.s 99.0 Moderately correlated
84 L1ME2 15 n.s 99.0 Moderately correlated
85 MLT1F1 15 *** 99.0 Moderately correlated
86 ERV3-16A3_I-int 14 n.s 99.0 Moderately correlated
87 L4_A_Mam 14 n.s 99.0 Moderately correlated
88 LTR33 14 n.s 99.0 Moderately correlated
89 LTR50 14 **** 99.0 Moderately correlated
90 MER73 14 **** 87.0 Weakly correlated
91 MLT1G1 14 ** 99.0 Moderately correlated
92 AluSg7 13 n.s 74.0 Weakly correlated
93 AluSx4 13 n.s 74.0 Weakly correlated
94 HAL1ME 13 n.s 99.0 Moderately correlated
95 L1M2 13 n.s 99.0 Moderately correlated
96 L1MC4a 13 n.s 99.0 Moderately correlated
97 LTR41 13 **** 99.0 Moderately correlated
98 LTR78 13 * 99.0 Moderately correlated
99 MLT1O 13 ** 99.0 Moderately correlated
100 FRAM 12 * 74.0 Weakly correlated
101 HAL1b 12 n.s 99.0 Moderately correlated
102 L1MEi 12 n.s 99.0 Moderately correlated
103 LTR104_Mam 12 **** 99.0 Moderately correlated
104 LTR12F 12 **** 28.9 Weakly correlated
105 LTR13_ 12 **** 28.9 Weakly correlated
106 LTR43B 12 **** 74.0 Weakly correlated
107 MER21B 12 * 99.0 Moderately correlated
108 MLT1A0 12 n.s 99.0 Moderately correlated
109 MamSINE1 12 *** 99.0 Moderately correlated
110 FLAM_A 11 n.s 74.0 Weakly correlated
111 L1ME3Cz 11 n.s 99.0 Moderately correlated
112 LFSINE_Vert 11 **** 319.0 Weakly correlated
113 LTR67B 11 ** 99.0 Moderately correlated
114 LTR78B 11 ** 99.0 Moderately correlated
115 MER41B 11 * 74.0 Weakly correlated
116 Plat_L3 11 **** 99.0 Moderately correlated
117 THE1A 11 n.s 43.0 Weakly correlated
118 ERVL-B4-int 10 n.s 99.0 Moderately correlated
119 HERVIP10FH-int 10 **** 28.9 Weakly correlated
120 L1MCb 10 n.s 99.0 Moderately correlated
121 L1MD 10 n.s 99.0 Moderately correlated
122 L1ME3 10 n.s 99.0 Moderately correlated
123 L1ME3B 10 n.s 99.0 Moderately correlated
124 L1ME4c 10 n.s 99.0 Moderately correlated
125 L1PA16 10 n.s 74.0 Weakly correlated
126 L4_C_Mam 10 n.s 99.0 Moderately correlated
127 LTR41C 10 **** 99.0 Moderately correlated
128 LTR79 10 ** 99.0 Moderately correlated
129 LTR84b 10 **** 99.0 Moderately correlated
130 MER21A 10 ** 74.0 Weakly correlated
131 MER4-int 10 n.s 74.0 Weakly correlated
132 MLT1A 10 n.s 99.0 Moderately correlated
133 MLT1E2 10 n.s 99.0 Moderately correlated
134 MLT1G3 10 * 99.0 Moderately correlated
135 MLT1H1 10 n.s 99.0 Moderately correlated
136 MLT1M 10 **** 99.0 Moderately correlated
137 AluJr4 9 n.s 74.0 Weakly correlated
138 L1MA3 9 n.s 74.0 Weakly correlated
139 L1MD1 9 n.s 99.0 Moderately correlated
140 L1ME5 9 n.s 99.0 Moderately correlated
141 L1PB1 9 n.s 74.0 Weakly correlated
142 MER21-int 9 ** 99.0 Moderately correlated
143 MER90a 9 *** 99.0 Moderately correlated
144 MLT2F 9 ** 99.0 Moderately correlated
145 HERVL-int 8 n.s 74.0 Weakly correlated
146 L1MA4 8 n.s 87.0 Weakly correlated
147 L1PREC2 8 n.s 43.0 Weakly correlated
148 LTR101_Mam 8 *** 99.0 Moderately correlated
149 LTR13A 8 **** 28.9 Weakly correlated
150 LTR2 8 *** 28.9 Weakly correlated
151 LTR40a 8 * 99.0 Moderately correlated
152 LTR49-int 8 n.s 74.0 Weakly correlated
153 MSTB 8 n.s 43.0 Weakly correlated
154 MSTD 8 n.s 74.0 Weakly correlated
155 AluSc5 7 n.s 74.0 Weakly correlated
156 HAL1M8 7 n.s 99.0 Moderately correlated
157 L1M4c 7 n.s 99.0 Moderately correlated
158 L1MA5 7 n.s 87.0 Weakly correlated
159 L1MB1 7 n.s 99.0 Moderately correlated
160 L1MC 7 n.s 99.0 Moderately correlated
161 L1ME2z 7 n.s 99.0 Moderately correlated
162 L1PA10 7 n.s 74.0 Weakly correlated
163 L2-3_Crp 7 ** 431.0 Weakly correlated
164 LOR1b 7 ** 74.0 Weakly correlated
165 LTR10A 7 **** 28.9 Weakly correlated
166 LTR16 7 n.s 99.0 Moderately correlated
167 LTR77 7 **** 94.0 Highly correlated
168 MER39 7 n.s 74.0 Weakly correlated
169 MER41C 7 *** 74.0 Weakly correlated
170 MER57B2 7 *** 43.0 Weakly correlated
171 MLT1E3 7 n.s 99.0 Moderately correlated
172 AluYj4 6 n.s 0.0 Weakly correlated
173 AluYm1 6 n.s 19.6 Weakly correlated
174 L1M4b 6 n.s 99.0 Moderately correlated
175 L1M8 6 n.s 99.0 Moderately correlated
176 L1MA4A 6 n.s 87.0 Weakly correlated
177 L1MA8 6 n.s 87.0 Weakly correlated
178 L1MCc 6 n.s 99.0 Moderately correlated
179 L1MD3 6 n.s 99.0 Moderately correlated
180 L1PA11 6 n.s 74.0 Weakly correlated
181 L1PA15 6 n.s 74.0 Weakly correlated
182 LOR1a 6 ** 74.0 Weakly correlated
183 LTR16A1 6 n.s 99.0 Moderately correlated
184 LTR27B 6 **** 43.0 Weakly correlated
185 LTR35B 6 **** 43.0 Weakly correlated
186 LTR55 6 **** 99.0 Moderately correlated
187 LTR81B 6 ** 99.0 Moderately correlated
188 MER34A 6 * 99.0 Moderately correlated
189 MER39B 6 * 74.0 Weakly correlated
190 MER41-int 6 n.s 74.0 Weakly correlated
191 MER41E 6 **** 74.0 Weakly correlated
192 MER77B 6 * 99.0 Moderately correlated
193 MLT1J1 6 n.s 99.0 Moderately correlated
194 CR1-3_Croc 5 ** 319.0 Weakly correlated
195 CR1_Mam 5 * 99.0 Moderately correlated
196 FAM 5 n.s 87.0 Weakly correlated
197 HERV17-int 5 n.s 28.9 Weakly correlated
198 HERVP71A-int 5 ** 43.0 Weakly correlated
199 L1M3 5 n.s 99.0 Moderately correlated
200 L1M6 5 n.s 99.0 Moderately correlated
201 L1MA7 5 n.s 87.0 Weakly correlated
202 L1ME3D 5 n.s 99.0 Moderately correlated
203 L1PA14 5 n.s 74.0 Weakly correlated
204 L1PA17 5 n.s 74.0 Weakly correlated
205 L1PA8 5 n.s 74.0 Weakly correlated
206 L1PB4 5 n.s 99.0 Moderately correlated
207 L1PBa 5 n.s 74.0 Weakly correlated
208 L4_B_Mam 5 n.s 99.0 Moderately correlated
209 LTR12C 5 n.s 19.6 Weakly correlated
210 LTR49 5 n.s 74.0 Weakly correlated
211 LTR52 5 * 99.0 Moderately correlated
212 LTR5B 5 * 28.9 Weakly correlated
213 LTR88b 5 ** 99.0 Moderately correlated
214 LTR8B 5 n.s 43.0 Weakly correlated
215 MER52A 5 n.s 74.0 Weakly correlated
216 MER57F 5 *** 74.0 Weakly correlated
217 MER65A 5 n.s 74.0 Weakly correlated
218 MER74B 5 * 99.0 Moderately correlated
219 MER76 5 ** 99.0 Moderately correlated
220 MLT1A1 5 n.s 87.0 Weakly correlated
221 MLT1H2 5 n.s 99.0 Moderately correlated
222 MLT2B3 5 n.s 99.0 Moderately correlated
223 MSTB2 5 n.s 74.0 Weakly correlated
224 MamGypLTR3a 5 * 99.0 Moderately correlated
225 MamRep605 5 n.s 99.0 Moderately correlated
226 AluSg4 4 n.s 74.0 Weakly correlated
227 HERV3-int 4 n.s 28.9 Weakly correlated
228 L1M7 4 n.s 99.0 Moderately correlated
229 L1MA10 4 n.s 99.0 Moderately correlated
230 L1MA2 4 n.s 74.0 Weakly correlated
231 L1MA6 4 n.s 87.0 Weakly correlated
232 L1MDa 4 n.s 99.0 Moderately correlated
233 L1MEb 4 n.s 99.0 Moderately correlated
234 L1P3 4 n.s 74.0 Weakly correlated
235 L1PA8A 4 n.s 74.0 Weakly correlated
236 LTR10F 4 ** 28.9 Weakly correlated
237 LTR16A 4 n.s 99.0 Moderately correlated
238 LTR16E1 4 n.s 99.0 Moderately correlated
239 LTR18B 4 ** 43.0 Weakly correlated
240 LTR22A 4 **** 43.0 Weakly correlated
241 LTR23 4 ** 74.0 Weakly correlated
242 LTR32 4 n.s 43.0 Weakly correlated
243 LTR33A_ 4 n.s 99.0 Moderately correlated
244 LTR33B 4 n.s 99.0 Moderately correlated
245 LTR37B 4 n.s 99.0 Moderately correlated
246 LTR62 4 ** 74.0 Weakly correlated
247 LTR69 4 **** 99.0 Moderately correlated
248 LTR81A 4 ** 99.0 Moderately correlated
249 LTR89 4 * 99.0 Moderately correlated
250 LTR8A 4 n.s 43.0 Weakly correlated
251 MER101 4 *** 74.0 Weakly correlated
252 MER41A 4 n.s 74.0 Weakly correlated
253 MER52D 4 n.s 74.0 Weakly correlated
254 MER61F 4 **** 43.0 Weakly correlated
255 MER66C 4 ** 43.0 Weakly correlated
256 MER72 4 n.s 43.0 Weakly correlated
257 MER72B 4 *** 43.0 Weakly correlated
258 MLT1I-int 4 * 99.0 Moderately correlated
259 MLT2B2 4 n.s 99.0 Moderately correlated
260 MSTC 4 n.s 74.0 Weakly correlated
261 MamGypLTR1a 4 * 99.0 Moderately correlated
262 MamGypLTR1c 4 * 99.0 Moderately correlated
263 MamGypsy2-LTR 4 *** 99.0 Moderately correlated
264 Penelope1_Vert 4 *** 319.0 Weakly correlated
265 X6A_LINE 4 ** 99.0 Moderately correlated
266 AmnSINE2 3 *** 319.0 Weakly correlated
267 ERV24_Prim-int 3 n.s 74.0 Weakly correlated
268 ERV3-16A3_LTR 3 n.s 99.0 Moderately correlated
269 HERV9NC-int 3 n.s 19.6 Weakly correlated
270 HERVL40-int 3 n.s 99.0 Moderately correlated
271 HERVL66-int 3 ** 43.0 Weakly correlated
272 Harlequin-int 3 n.s 74.0 Weakly correlated
273 L1M3f 3 n.s 87.0 Weakly correlated
274 L1M4a2 3 n.s 99.0 Moderately correlated
275 L1M6B 3 ** 99.0 Moderately correlated
276 L1MDb 3 n.s 99.0 Moderately correlated
277 L1ME3F 3 n.s 99.0 Moderately correlated
278 L1MEj 3 n.s 99.0 Moderately correlated
279 L1P4 3 n.s 74.0 Weakly correlated
280 L1PA12 3 n.s 74.0 Weakly correlated
281 L1PB 3 n.s 74.0 Weakly correlated
282 L1PB3 3 n.s 74.0 Weakly correlated
283 LOR1-int 3 n.s 74.0 Weakly correlated
284 LTR103_Mam 3 ** 99.0 Moderately correlated
285 LTR103b_Mam 3 ** 99.0 Moderately correlated
286 LTR12E 3 ** 19.6 Weakly correlated
287 LTR15 3 ** 28.9 Weakly correlated
288 LTR1A2 3 n.s 43.0 Weakly correlated
289 LTR33C 3 n.s 99.0 Moderately correlated
290 LTR37-int 3 n.s 99.0 Moderately correlated
291 LTR40b 3 n.s 99.0 Moderately correlated
292 LTR40c 3 * 99.0 Moderately correlated
293 LTR41B 3 n.s 99.0 Moderately correlated
294 LTR42 3 ** 74.0 Weakly correlated
295 LTR46 3 ** 43.0 Weakly correlated
296 LTR54 3 n.s 74.0 Weakly correlated
297 LTR54B 3 n.s 74.0 Weakly correlated
298 LTR60B 3 ** 74.0 Weakly correlated
299 LTR66 3 ** 43.0 Weakly correlated
300 LTR7 3 n.s 19.6 Weakly correlated
301 LTR73 3 ** 99.0 Moderately correlated
302 LTR82B 3 n.s 99.0 Moderately correlated
303 LTR9B 3 n.s 43.0 Weakly correlated
304 MER11D 3 * 19.6 Weakly correlated
305 MER31A 3 n.s 87.0 Weakly correlated
306 MER41G 3 *** 74.0 Weakly correlated
307 MER49 3 n.s 43.0 Weakly correlated
308 MER4A1 3 n.s 74.0 Weakly correlated
309 MER51A 3 n.s 43.0 Weakly correlated
310 MER57A1 3 n.s 43.0 Weakly correlated
311 MER57B1 3 n.s 43.0 Weakly correlated
312 MER61B 3 * 43.0 Weakly correlated
313 MER67A 3 ** 99.0 Moderately correlated
314 MER67C 3 n.s 99.0 Moderately correlated
315 MER77 3 n.s 99.0 Moderately correlated
316 MER89 3 n.s 99.0 Moderately correlated
317 MLT2A2 3 n.s 74.0 Weakly correlated
318 MLT2B4 3 n.s 99.0 Moderately correlated
319 MLT2E 3 ** 99.0 Moderately correlated
320 MSTB1 3 n.s 74.0 Weakly correlated
321 MamGyp-int 3 * 99.0 Moderately correlated
322 MamGypLTR2c 3 * 99.0 Moderately correlated
323 MamRep1527 3 n.s 99.0 Moderately correlated
324 X7C_LINE 3 ** 319.0 Weakly correlated
325 Alu 2 n.s 74.0 Weakly correlated
326 AluSq4 2 n.s 74.0 Weakly correlated
327 AluYc 2 n.s 74.0 Weakly correlated
328 AluYf1 2 n.s 19.6 Weakly correlated
329 AluYh3a3 2 * 15.2 Weakly correlated
330 AluYi6 2 * 15.2 Weakly correlated
331 ERV24B_Prim-int 2 n.s 74.0 Weakly correlated
332 HERV15-int 2 n.s 28.9 Weakly correlated
333 HERV16-int 2 n.s 99.0 Moderately correlated
334 HERV1_I-int 2 * 43.0 Weakly correlated
335 HERV35I-int 2 n.s 43.0 Weakly correlated
336 HERVE_a-int 2 n.s 28.9 Weakly correlated
337 HERVIP10B3-int 2 n.s 28.9 Weakly correlated
338 HERVK-int 2 n.s 28.9 Weakly correlated
339 HERVK22-int 2 n.s 43.0 Weakly correlated
340 HUERS-P1-int 2 n.s 43.0 Weakly correlated
341 HUERS-P3b-int 2 n.s 43.0 Weakly correlated
342 L1M3c 2 n.s 99.0 Moderately correlated
343 L1M4a1 2 n.s 99.0 Moderately correlated
344 L1ME3C 2 n.s 99.0 Moderately correlated
345 L1PA13 2 n.s 74.0 Weakly correlated
346 L1PA3 2 n.s 19.6 Weakly correlated
347 L1PB2 2 n.s 74.0 Weakly correlated
348 L1PBa1 2 n.s 74.0 Weakly correlated
349 LTR102_Mam 2 n.s 99.0 Moderately correlated
350 LTR105_Mam 2 n.s 99.0 Moderately correlated
351 LTR12_ 2 n.s 28.9 Weakly correlated
352 LTR16A2 2 n.s 99.0 Moderately correlated
353 LTR16B 2 n.s 99.0 Moderately correlated
354 LTR16B1 2 n.s 99.0 Moderately correlated
355 LTR16E2 2 n.s 99.0 Moderately correlated
356 LTR17 2 n.s 28.9 Weakly correlated
357 LTR19C 2 ** 43.0 Weakly correlated
358 LTR1A1 2 n.s 43.0 Weakly correlated
359 LTR21A 2 ** 28.9 Weakly correlated
360 LTR27 2 ** 43.0 Weakly correlated
361 LTR28C 2 n.s 43.0 Weakly correlated
362 LTR29 2 n.s 43.0 Weakly correlated
363 LTR33A 2 n.s 99.0 Moderately correlated
364 LTR38 2 * 74.0 Weakly correlated
365 LTR38B 2 * 74.0 Weakly correlated
366 LTR39 2 n.s 43.0 Weakly correlated
367 LTR3B_ 2 * 28.9 Weakly correlated
368 LTR43-int 2 * 74.0 Weakly correlated
369 LTR45C 2 n.s 99.0 Moderately correlated
370 LTR47B 2 **** 74.0 Weakly correlated
371 LTR48B 2 n.s 74.0 Weakly correlated
372 LTR51 2 n.s 74.0 Weakly correlated
373 LTR53 2 n.s 99.0 Moderately correlated
374 LTR53B 2 * 99.0 Moderately correlated
375 LTR56 2 n.s 74.0 Weakly correlated
376 LTR57 2 * 74.0 Weakly correlated
377 LTR81C 2 n.s 99.0 Moderately correlated
378 LTR83 2 n.s 99.0 Moderately correlated
379 LTR88a 2 n.s 99.0 Moderately correlated
380 LTR88c 2 n.s 99.0 Moderately correlated
381 LTR90A 2 ** 99.0 Moderately correlated
382 LTR91 2 ** 99.0 Moderately correlated
383 LTR9D 2 n.s 43.0 Weakly correlated
384 MER101B 2 * 87.0 Weakly correlated
385 MER31B 2 n.s 99.0 Moderately correlated
386 MER34C2 2 n.s 74.0 Weakly correlated
387 MER4B-int 2 n.s 99.0 Moderately correlated
388 MER50 2 n.s 43.0 Weakly correlated
389 MER51-int 2 n.s 43.0 Weakly correlated
390 MER54A 2 n.s 87.0 Weakly correlated
391 MER57C2 2 n.s 87.0 Weakly correlated
392 MER57E3 2 ** 74.0 Weakly correlated
393 MER61-int 2 n.s 43.0 Weakly correlated
394 MER66-int 2 n.s 43.0 Weakly correlated
395 MER74C 2 * 99.0 Moderately correlated
396 MER84 2 * 43.0 Weakly correlated
397 MER89-int 2 n.s 99.0 Moderately correlated
398 MER92B 2 n.s 99.0 Moderately correlated
399 MER92C 2 ** 99.0 Moderately correlated
400 MLT1A0-int 2 n.s 99.0 Moderately correlated
401 MLT1B-int 2 n.s 99.0 Moderately correlated
402 MLT1E 2 n.s 99.0 Moderately correlated
403 MLT1E1A 2 n.s 99.0 Moderately correlated
404 MLT1E3-int 2 ** 99.0 Moderately correlated
405 MLT1G 2 n.s 99.0 Moderately correlated
406 MLT1J-int 2 n.s 99.0 Moderately correlated
407 MLT1J2-int 2 n.s 99.0 Moderately correlated
408 MLT2B1 2 n.s 99.0 Moderately correlated
409 MLT2C2 2 n.s 99.0 Moderately correlated
410 MLT2D 2 n.s 99.0 Moderately correlated
411 MamGypLTR2b 2 n.s 99.0 Moderately correlated
412 MamGypLTR3 2 n.s 99.0 Moderately correlated
413 MamGypsy2-I 2 n.s 99.0 Moderately correlated
414 THE1B-int 2 n.s 43.0 Weakly correlated
415 THE1C-int 2 n.s 43.0 Weakly correlated
416 X7B_LINE 2 * 319.0 Weakly correlated
417 X9_LINE 2 ** 319.0 Weakly correlated
418 AluYa8 1 * 15.2 Weakly correlated
419 AluYb8 1 n.s 15.2 Weakly correlated
420 AluYc3 1 n.s 74.0 Weakly correlated
421 AluYe5 1 n.s 74.0 Weakly correlated
422 AluYh3 1 n.s 15.2 Weakly correlated
423 CR1-16_AMi 1 n.s 319.0 Weakly correlated
424 ERVL-int 1 n.s 99.0 Moderately correlated
425 HERV30-int 1 n.s 28.9 Weakly correlated
426 HERV4_I-int 1 n.s 43.0 Weakly correlated
427 HERVH48-int 1 n.s 28.9 Weakly correlated
428 HERVI-int 1 n.s 28.9 Weakly correlated
429 HERVIP10F-int 1 n.s 28.9 Weakly correlated
430 HERVK13-int 1 n.s 19.6 Weakly correlated
431 HERVK14-int 1 n.s 28.9 Weakly correlated
432 HERVS71-int 1 n.s 28.9 Weakly correlated
433 HUERS-P3-int 1 n.s 43.0 Weakly correlated
434 L1M2a1 1 n.s 79.0 Weakly correlated
435 L1M2c 1 n.s 87.0 Weakly correlated
436 L1M3a 1 n.s 99.0 Moderately correlated
437 L1M3de 1 n.s 99.0 Moderately correlated
438 L1MA1 1 n.s 74.0 Weakly correlated
439 L1ME3E 1 n.s 99.0 Moderately correlated
440 L1MEg2 1 n.s 99.0 Moderately correlated
441 L1MEh 1 n.s 99.0 Moderately correlated
442 L1P3b 1 * 43.0 Weakly correlated
443 L1P4d 1 n.s 74.0 Weakly correlated
444 L1P4e 1 n.s 74.0 Weakly correlated
445 L1PA15-16 1 n.s 74.0 Weakly correlated
446 L2-1_AMi 1 n.s 319.0 Weakly correlated
447 L5 1 n.s 99.0 Moderately correlated
448 LTR10B1 1 n.s 28.9 Weakly correlated
449 LTR12 1 n.s 28.9 Weakly correlated
450 LTR16B2 1 n.s 99.0 Moderately correlated
451 LTR19B 1 n.s 43.0 Weakly correlated
452 LTR1B1 1 n.s 43.0 Weakly correlated
453 LTR1E 1 n.s 43.0 Weakly correlated
454 LTR1F 1 n.s 43.0 Weakly correlated
455 LTR23-int 1 * 74.0 Weakly correlated
456 LTR24 1 n.s 74.0 Weakly correlated
457 LTR24B 1 n.s 74.0 Weakly correlated
458 LTR26 1 n.s 74.0 Weakly correlated
459 LTR26B 1 * 74.0 Weakly correlated
460 LTR27C 1 n.s 43.0 Weakly correlated
461 LTR28B 1 n.s 43.0 Weakly correlated
462 LTR31 1 n.s 74.0 Weakly correlated
463 LTR35 1 * 43.0 Weakly correlated
464 LTR35A 1 * 43.0 Weakly correlated
465 LTR36 1 n.s 74.0 Weakly correlated
466 LTR37A 1 n.s 99.0 Moderately correlated
467 LTR38-int 1 * 74.0 Weakly correlated
468 LTR4 1 * 28.9 Weakly correlated
469 LTR40A1 1 n.s 99.0 Moderately correlated
470 LTR44 1 n.s 74.0 Weakly correlated
471 LTR45B 1 n.s 74.0 Weakly correlated
472 LTR47A2 1 n.s 74.0 Weakly correlated
473 LTR48 1 n.s 74.0 Weakly correlated
474 LTR61 1 n.s 43.0 Weakly correlated
475 LTR64 1 n.s 74.0 Weakly correlated
476 LTR68 1 n.s 99.0 Moderately correlated
477 LTR6A 1 n.s 28.9 Weakly correlated
478 LTR6B 1 n.s 19.6 Weakly correlated
479 LTR71B 1 n.s 43.0 Weakly correlated
480 LTR72B 1 * 74.0 Weakly correlated
481 LTR75B 1 n.s 99.0 Moderately correlated
482 LTR7C 1 n.s 28.9 Weakly correlated
483 LTR81 1 n.s 99.0 Moderately correlated
484 LTR81AB 1 * 99.0 Moderately correlated
485 LTR82A 1 n.s 99.0 Moderately correlated
486 LTR84a 1 n.s 99.0 Moderately correlated
487 LTR85a 1 n.s 99.0 Moderately correlated
488 LTR85b 1 n.s 99.0 Moderately correlated
489 LTR85c 1 n.s 99.0 Moderately correlated
490 LTR86A1 1 n.s 99.0 Moderately correlated
491 LTR86A2 1 n.s 99.0 Moderately correlated
492 LTR86B1 1 n.s 99.0 Moderately correlated
493 MER101-int 1 n.s 74.0 Weakly correlated
494 MER110-int 1 n.s 99.0 Moderately correlated
495 MER110A 1 n.s 99.0 Moderately correlated
496 MER11C 1 n.s 19.6 Weakly correlated
497 MER129 1 ** 319.0 Weakly correlated
498 MER31-int 1 n.s 99.0 Moderately correlated
499 MER34B 1 n.s 87.0 Weakly correlated
500 MER34C_ 1 n.s 87.0 Weakly correlated
501 MER48 1 n.s 28.9 Weakly correlated
502 MER4CL34 1 n.s 43.0 Weakly correlated
503 MER4D1 1 n.s 74.0 Weakly correlated
504 MER4E 1 n.s 74.0 Weakly correlated
505 MER50B 1 n.s 43.0 Weakly correlated
506 MER51C 1 n.s 43.0 Weakly correlated
507 MER51D 1 * 43.0 Weakly correlated
508 MER51E 1 n.s 43.0 Weakly correlated
509 MER52-int 1 n.s 99.0 Moderately correlated
510 MER57A-int 1 n.s 43.0 Weakly correlated
511 MER57E1 1 n.s 87.0 Weakly correlated
512 MER61A 1 n.s 43.0 Weakly correlated
513 MER61C 1 n.s 43.0 Weakly correlated
514 MER61D 1 n.s 43.0 Weakly correlated
515 MER61E 1 n.s 43.0 Weakly correlated
516 MER65-int 1 n.s 87.0 Weakly correlated
517 MER65B 1 * 74.0 Weakly correlated
518 MER65C 1 n.s 74.0 Weakly correlated
519 MER65D 1 n.s 87.0 Weakly correlated
520 MER66B 1 n.s 43.0 Weakly correlated
521 MER68 1 n.s 99.0 Moderately correlated
522 MER68-int 1 n.s 99.0 Moderately correlated
523 MER68B 1 n.s 99.0 Moderately correlated
524 MER70C 1 n.s 99.0 Moderately correlated
525 MER83B 1 * 43.0 Weakly correlated
526 MER90 1 n.s 99.0 Moderately correlated
527 MER92A 1 * 99.0 Moderately correlated
528 MER92D 1 * 99.0 Moderately correlated
529 MER9a2 1 n.s 19.6 Weakly correlated
530 MLT1D-int 1 n.s 99.0 Moderately correlated
531 MLT1E1 1 n.s 99.0 Moderately correlated
532 MLT1F-int 1 n.s 99.0 Moderately correlated
533 MLT1G3-int 1 n.s 99.0 Moderately correlated
534 MLT1H-int 1 n.s 99.0 Moderately correlated
535 MLT1H2-int 1 n.s 99.0 Moderately correlated
536 MLT2A1 1 n.s 74.0 Weakly correlated
537 MLT2C1 1 n.s 99.0 Moderately correlated
538 MSTA1 1 n.s 74.0 Weakly correlated
539 MSTB-int 1 n.s 43.0 Weakly correlated
540 PABL_A 1 n.s 43.0 Weakly correlated
541 PABL_B 1 n.s 43.0 Weakly correlated
542 PABL_B-int 1 n.s 74.0 Weakly correlated
543 PRIMA41-int 1 n.s 74.0 Weakly correlated
544 PRIMA4_LTR 1 n.s 74.0 Weakly correlated
545 PrimLTR79 1 * 74.0 Weakly correlated
546 SVA_C 1 n.s 15.2 Weakly correlated
547 THE1A-int 1 n.s 43.0 Weakly correlated
548 THE1D-int 1 n.s 28.9 Weakly correlated
549 X7A_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 THE1B 143 **** 43.0 Weakly correlated
2 THE1C 70 **** 43.0 Weakly correlated
3 MIRb 46 n.s 99.0 Moderately correlated
4 MIR3 42 n.s 99.0 Moderately correlated
5 L2a 40 n.s 99.0 Moderately correlated
6 L2b 38 n.s 99.0 Moderately correlated
7 L2c 38 n.s 99.0 Moderately correlated
8 LTR13 24 **** 19.6 Weakly correlated
9 THE1D 23 n.s 43.0 Weakly correlated
10 L2 21 n.s 99.0 Moderately correlated
11 MIRc 21 n.s 99.0 Moderately correlated
12 L1MEd 19 n.s 99.0 Moderately correlated
13 LTR43 17 **** 74.0 Weakly correlated
14 MER74A 17 **** 99.0 Moderately correlated
15 HERVE-int 16 **** 19.6 Weakly correlated
16 L3 15 n.s 99.0 Moderately correlated
17 AluJb 15 n.s 74.0 Weakly correlated
18 HAL1 15 n.s 99.0 Moderately correlated
19 MER21C 15 n.s 99.0 Moderately correlated
20 MLT1K 15 n.s 99.0 Moderately correlated
21 MSTA 13 n.s 43.0 Weakly correlated
22 AluSx 12 n.s 74.0 Weakly correlated
23 MLT1N2 12 * 99.0 Moderately correlated
24 L1PA7 11 n.s 74.0 Weakly correlated
25 L1MCa 11 n.s 99.0 Moderately correlated
26 LTR13_ 11 **** 28.9 Weakly correlated
27 ERVL-E-int 10 n.s 99.0 Moderately correlated
28 LTR43B 10 **** 74.0 Weakly correlated
29 L1MEf 9 n.s 99.0 Moderately correlated
30 AluSz 9 n.s 74.0 Weakly correlated
31 L1MC1 9 n.s 99.0 Moderately correlated
32 MER21B 9 n.s 99.0 Moderately correlated
33 L1M1 9 n.s 74.0 Weakly correlated
34 L1MB7 8 n.s 99.0 Moderately correlated
35 L1M4 8 n.s 99.0 Moderately correlated
36 MLT1L 8 n.s 99.0 Moderately correlated
37 MIR 8 n.s 99.0 Moderately correlated
38 MLT1H 8 n.s 99.0 Moderately correlated
39 LTR41 8 *** 99.0 Moderately correlated
40 L1ME1 8 n.s 99.0 Moderately correlated
41 MLT1D 8 n.s 99.0 Moderately correlated
42 L1ME4b 8 n.s 99.0 Moderately correlated
43 MER21A 8 n.s 74.0 Weakly correlated
44 AluSx1 7 n.s 74.0 Weakly correlated
45 L1MB2 7 n.s 99.0 Moderately correlated
46 L1MA9 7 n.s 99.0 Moderately correlated
47 L1MCb 7 n.s 99.0 Moderately correlated
48 LTR84b 6 ** 99.0 Moderately correlated
49 L1MB3 6 n.s 99.0 Moderately correlated
50 L1ME3A 6 n.s 99.0 Moderately correlated
51 THE1A 6 n.s 43.0 Weakly correlated
52 L1MC2 6 n.s 99.0 Moderately correlated
53 L1MA4 6 n.s 87.0 Weakly correlated
54 MER4-int 6 n.s 74.0 Weakly correlated
55 MIR1_Amn 6 n.s 319.0 Weakly correlated
56 LTR13A 6 *** 28.9 Weakly correlated
57 AluSp 6 n.s 74.0 Weakly correlated
58 L1MEc 6 n.s 99.0 Moderately correlated
59 MER41E 5 *** 74.0 Weakly correlated
60 MLT1F 5 n.s 99.0 Moderately correlated
61 ERVL-B4-int 5 n.s 99.0 Moderately correlated
62 LTR27B 5 **** 43.0 Weakly correlated
63 LTR55 5 *** 99.0 Moderately correlated
64 L1MC3 5 n.s 99.0 Moderately correlated
65 MLT1F2 5 n.s 99.0 Moderately correlated
66 HERVL-int 5 n.s 74.0 Weakly correlated
67 MER41B 5 n.s 74.0 Weakly correlated
68 MLT1J 4 n.s 99.0 Moderately correlated
69 L1MC4a 4 n.s 99.0 Moderately correlated
70 HAL1b 4 n.s 99.0 Moderately correlated
71 L1MEg 4 n.s 99.0 Moderately correlated
72 L1PA11 4 n.s 74.0 Weakly correlated
73 MLT1J1 4 n.s 99.0 Moderately correlated
74 AluSg 4 n.s 74.0 Weakly correlated
75 L1M5 4 n.s 99.0 Moderately correlated
76 L1MA3 4 n.s 74.0 Weakly correlated
77 MLT1C 4 n.s 94.0 Highly correlated
78 L1MC4 4 n.s 99.0 Moderately correlated
79 MER73 4 *** 87.0 Weakly correlated
80 MamRTE1 4 n.s 99.0 Moderately correlated
81 LTR69 4 **** 99.0 Moderately correlated
82 MER74B 4 n.s 99.0 Moderately correlated
83 L1ME4a 3 n.s 99.0 Moderately correlated
84 L1PB1 3 n.s 74.0 Weakly correlated
85 LTR42 3 ** 74.0 Weakly correlated
86 MLT2B2 3 n.s 99.0 Moderately correlated
87 L1PA10 3 n.s 74.0 Weakly correlated
88 L1PREC2 3 n.s 43.0 Weakly correlated
89 MLT1B 3 n.s 99.0 Moderately correlated
90 AluSc 3 n.s 74.0 Weakly correlated
91 HERVL66-int 3 ** 43.0 Weakly correlated
92 L1MD2 3 n.s 99.0 Moderately correlated
93 LTR54 3 n.s 74.0 Weakly correlated
94 LTR78B 3 n.s 99.0 Moderately correlated
95 MER57F 3 ** 74.0 Weakly correlated
96 MLT1O 3 n.s 99.0 Moderately correlated
97 AluSq2 3 n.s 74.0 Weakly correlated
98 L1MB5 3 n.s 99.0 Moderately correlated
99 L1MC5a 3 n.s 99.0 Moderately correlated
100 AluSz6 3 n.s 74.0 Weakly correlated
101 AmnSINE1 3 n.s 319.0 Weakly correlated
102 L1MEb 3 n.s 99.0 Moderately correlated
103 LTR33 3 n.s 99.0 Moderately correlated
104 MamGypLTR1a 3 n.s 99.0 Moderately correlated
105 AluSx3 3 n.s 74.0 Weakly correlated
106 HERV9NC-int 3 n.s 19.6 Weakly correlated
107 LTR33A_ 3 n.s 99.0 Moderately correlated
108 LTR78 3 n.s 99.0 Moderately correlated
109 MER77B 3 n.s 99.0 Moderately correlated
110 MLT1I 3 n.s 99.0 Moderately correlated
111 MamGypLTR1c 3 n.s 99.0 Moderately correlated
112 HERV17-int 3 n.s 28.9 Weakly correlated
113 LTR104_Mam 3 n.s 99.0 Moderately correlated
114 LTR5B 3 n.s 28.9 Weakly correlated
115 MLT1E3 3 n.s 99.0 Moderately correlated
116 HAL1ME 3 n.s 99.0 Moderately correlated
117 MLT1E2 3 n.s 99.0 Moderately correlated
118 MLT1G1 3 n.s 99.0 Moderately correlated
119 MLT1J2 3 n.s 99.0 Moderately correlated
120 AluSx4 2 n.s 74.0 Weakly correlated
121 L1ME3Cz 2 n.s 99.0 Moderately correlated
122 LTR50 2 n.s 99.0 Moderately correlated
123 LTR77 2 ** 94.0 Highly correlated
124 MER72 2 n.s 43.0 Weakly correlated
125 MLT1A1 2 n.s 87.0 Weakly correlated
126 MLT2E 2 * 99.0 Moderately correlated
127 FLAM_A 2 n.s 74.0 Weakly correlated
128 LTR27 2 ** 43.0 Weakly correlated
129 LTR40a 2 n.s 99.0 Moderately correlated
130 MER21-int 2 n.s 99.0 Moderately correlated
131 MER74C 2 * 99.0 Moderately correlated
132 MLT1M 2 n.s 99.0 Moderately correlated
133 AluJo 2 n.s 74.0 Weakly correlated
134 HUERS-P1-int 2 n.s 43.0 Weakly correlated
135 L1M3f 2 n.s 87.0 Weakly correlated
136 L1ME2 2 n.s 99.0 Moderately correlated
137 L1PB4 2 n.s 99.0 Moderately correlated
138 LTR1A2 2 n.s 43.0 Weakly correlated
139 LTR54B 2 n.s 74.0 Weakly correlated
140 MER41-int 2 n.s 74.0 Weakly correlated
141 AluJr 2 n.s 74.0 Weakly correlated
142 L1M2 2 n.s 99.0 Moderately correlated
143 L1M3c 2 n.s 99.0 Moderately correlated
144 L1ME2z 2 n.s 99.0 Moderately correlated
145 L1MEi 2 n.s 99.0 Moderately correlated
146 LTR16 2 n.s 99.0 Moderately correlated
147 LTR28C 2 n.s 43.0 Weakly correlated
148 MLT2B3 2 n.s 99.0 Moderately correlated
149 ERV3-16A3_I-int 2 n.s 99.0 Moderately correlated
150 L1M4b 2 n.s 99.0 Moderately correlated
151 L1MB8 2 n.s 99.0 Moderately correlated
152 L1MD3 2 n.s 99.0 Moderately correlated
153 L4_A_Mam 2 n.s 99.0 Moderately correlated
154 LFSINE_Vert 2 n.s 319.0 Weakly correlated
155 LTR8 2 n.s 43.0 Weakly correlated
156 AluSg7 2 n.s 74.0 Weakly correlated
157 HERVK22-int 2 n.s 43.0 Weakly correlated
158 L1PBa 2 n.s 74.0 Weakly correlated
159 L1PBa1 2 n.s 74.0 Weakly correlated
160 LOR1-int 2 n.s 74.0 Weakly correlated
161 LTR105_Mam 2 n.s 99.0 Moderately correlated
162 LTR41C 2 n.s 99.0 Moderately correlated
163 LTR9B 2 n.s 43.0 Weakly correlated
164 L1P3 2 n.s 74.0 Weakly correlated
165 L1PA14 2 n.s 74.0 Weakly correlated
166 LTR16C 2 n.s 99.0 Moderately correlated
167 LTR60B 2 * 74.0 Weakly correlated
168 MER39B 2 n.s 74.0 Weakly correlated
169 HAL1M8 2 n.s 99.0 Moderately correlated
170 HERV3-int 2 n.s 28.9 Weakly correlated
171 HERVP71A-int 2 n.s 43.0 Weakly correlated
172 L1MB1 2 n.s 99.0 Moderately correlated
173 L1PA16 2 n.s 74.0 Weakly correlated
174 MER52A 2 n.s 74.0 Weakly correlated
175 MSTD 2 n.s 74.0 Weakly correlated
176 HERV15-int 1 n.s 28.9 Weakly correlated
177 HERV1_I-int 1 n.s 43.0 Weakly correlated
178 HERVK-int 1 n.s 28.9 Weakly correlated
179 L1M4a2 1 n.s 99.0 Moderately correlated
180 L1MA1 1 n.s 74.0 Weakly correlated
181 L1MA10 1 n.s 99.0 Moderately correlated
182 L1MA2 1 n.s 74.0 Weakly correlated
183 L1MA7 1 n.s 87.0 Weakly correlated
184 L1ME3D 1 n.s 99.0 Moderately correlated
185 LTR1A1 1 n.s 43.0 Weakly correlated
186 LTR52 1 n.s 99.0 Moderately correlated
187 LTR88c 1 n.s 99.0 Moderately correlated
188 MER41A 1 n.s 74.0 Weakly correlated
189 MER54A 1 n.s 87.0 Weakly correlated
190 MER67A 1 n.s 99.0 Moderately correlated
191 MER77 1 n.s 99.0 Moderately correlated
192 MER90a 1 n.s 99.0 Moderately correlated
193 MSTB2 1 n.s 74.0 Weakly correlated
194 MamGypsy2-LTR 1 n.s 99.0 Moderately correlated
195 THE1C-int 1 n.s 43.0 Weakly correlated
196 AluSc5 1 n.s 74.0 Weakly correlated
197 AmnSINE2 1 n.s 319.0 Weakly correlated
198 ERV24_Prim-int 1 n.s 74.0 Weakly correlated
199 ERVL-int 1 n.s 99.0 Moderately correlated
200 FLAM_C 1 n.s 74.0 Weakly correlated
201 HERV30-int 1 n.s 28.9 Weakly correlated
202 L1MC 1 n.s 99.0 Moderately correlated
203 L1ME3 1 n.s 99.0 Moderately correlated
204 LTR103b_Mam 1 n.s 99.0 Moderately correlated
205 LTR16B2 1 n.s 99.0 Moderately correlated
206 LTR16E2 1 n.s 99.0 Moderately correlated
207 LTR33C 1 n.s 99.0 Moderately correlated
208 LTR40b 1 n.s 99.0 Moderately correlated
209 LTR48 1 n.s 74.0 Weakly correlated
210 MER34C_ 1 n.s 87.0 Weakly correlated
211 MER4D1 1 n.s 74.0 Weakly correlated
212 MER51C 1 n.s 43.0 Weakly correlated
213 MER61F 1 n.s 43.0 Weakly correlated
214 MLT1D-int 1 n.s 99.0 Moderately correlated
215 MLT1E3-int 1 * 99.0 Moderately correlated
216 MLT1G3 1 n.s 99.0 Moderately correlated
217 MLT1H2-int 1 n.s 99.0 Moderately correlated
218 MLT1J2-int 1 n.s 99.0 Moderately correlated
219 MamRep1527 1 n.s 99.0 Moderately correlated
220 PABL_B-int 1 n.s 74.0 Weakly correlated
221 AluJr4 1 n.s 74.0 Weakly correlated
222 HERV35I-int 1 n.s 43.0 Weakly correlated
223 HERVI-int 1 n.s 28.9 Weakly correlated
224 HERVIP10B3-int 1 n.s 28.9 Weakly correlated
225 HERVL40-int 1 n.s 99.0 Moderately correlated
226 L1MA4A 1 n.s 87.0 Weakly correlated
227 L1MA6 1 n.s 87.0 Weakly correlated
228 L1PA8A 1 n.s 74.0 Weakly correlated
229 L2-1_AMi 1 n.s 319.0 Weakly correlated
230 LTR16B1 1 n.s 99.0 Moderately correlated
231 LTR33B 1 n.s 99.0 Moderately correlated
232 LTR35B 1 n.s 43.0 Weakly correlated
233 LTR45C 1 n.s 99.0 Moderately correlated
234 LTR73 1 n.s 99.0 Moderately correlated
235 LTR82B 1 n.s 99.0 Moderately correlated
236 MER41G 1 * 74.0 Weakly correlated
237 MER51A 1 n.s 43.0 Weakly correlated
238 MER52D 1 n.s 74.0 Weakly correlated
239 MER65A 1 n.s 74.0 Weakly correlated
240 MLT1A0 1 n.s 99.0 Moderately correlated
241 MLT1F1 1 n.s 99.0 Moderately correlated
242 MLT1H2 1 n.s 99.0 Moderately correlated
243 PRIMA41-int 1 n.s 74.0 Weakly correlated
244 X6A_LINE 1 n.s 99.0 Moderately correlated
245 CR1-3_Croc 1 n.s 319.0 Weakly correlated
246 HERV16-int 1 n.s 99.0 Moderately correlated
247 HERVIP10FH-int 1 n.s 28.9 Weakly correlated
248 L1M3 1 n.s 99.0 Moderately correlated
249 L1M6B 1 n.s 99.0 Moderately correlated
250 L1MB4 1 n.s 99.0 Moderately correlated
251 L1MD 1 n.s 99.0 Moderately correlated
252 L1MEj 1 n.s 99.0 Moderately correlated
253 LTR39 1 n.s 43.0 Weakly correlated
254 LTR85c 1 n.s 99.0 Moderately correlated
255 MER34A 1 n.s 99.0 Moderately correlated
256 MER52-int 1 n.s 99.0 Moderately correlated
257 MER61B 1 n.s 43.0 Weakly correlated
258 MLT2A2 1 n.s 74.0 Weakly correlated
259 MamRep605 1 n.s 99.0 Moderately correlated
260 PRIMA4_LTR 1 n.s 74.0 Weakly correlated
261 AluSq 1 n.s 74.0 Weakly correlated
262 Harlequin-int 1 n.s 74.0 Weakly correlated
263 L1M2a1 1 n.s 79.0 Weakly correlated
264 L1MA5 1 n.s 87.0 Weakly correlated
265 L1ME3C 1 n.s 99.0 Moderately correlated
266 L1P3b 1 * 43.0 Weakly correlated
267 LTR12F 1 n.s 28.9 Weakly correlated
268 LTR16E1 1 n.s 99.0 Moderately correlated
269 LTR82A 1 n.s 99.0 Moderately correlated
270 MER31A 1 n.s 87.0 Weakly correlated
271 MER66-int 1 n.s 43.0 Weakly correlated
272 MER68 1 n.s 99.0 Moderately correlated
273 MLT1H1 1 n.s 99.0 Moderately correlated
274 MamGypLTR2c 1 n.s 99.0 Moderately correlated
275 Penelope1_Vert 1 n.s 319.0 Weakly correlated
276 AluSc8 1 n.s 74.0 Weakly correlated
277 L1M7 1 n.s 99.0 Moderately correlated
278 L1ME3F 1 n.s 99.0 Moderately correlated
279 L3b 1 n.s 99.0 Moderately correlated
280 LTR16A 1 n.s 99.0 Moderately correlated
281 LTR16A1 1 n.s 99.0 Moderately correlated
282 LTR18B 1 n.s 43.0 Weakly correlated
283 LTR19C 1 n.s 43.0 Weakly correlated
284 LTR1B1 1 n.s 43.0 Weakly correlated
285 LTR1F 1 n.s 43.0 Weakly correlated
286 LTR24 1 n.s 74.0 Weakly correlated
287 LTR38-int 1 * 74.0 Weakly correlated
288 LTR48B 1 n.s 74.0 Weakly correlated
289 LTR91 1 * 99.0 Moderately correlated
290 MER101 1 n.s 74.0 Weakly correlated
291 MER50B 1 n.s 43.0 Weakly correlated
292 MLT1G 1 n.s 99.0 Moderately correlated
293 MLT2D 1 n.s 99.0 Moderately correlated
294 MLT2F 1 n.s 99.0 Moderately correlated
295 MSTB1 1 n.s 74.0 Weakly correlated
296 MamGypLTR3a 1 n.s 99.0 Moderately correlated
297 PABL_B 1 n.s 43.0 Weakly correlated
298 HERVS71-int 1 n.s 28.9 Weakly correlated
299 L1PA12 1 n.s 74.0 Weakly correlated
300 LTR2B 1 n.s 19.6 Weakly correlated
301 LTR49-int 1 n.s 74.0 Weakly correlated
302 LTR66 1 n.s 43.0 Weakly correlated
303 LTR79 1 n.s 99.0 Moderately correlated
304 LTR81C 1 n.s 99.0 Moderately correlated
305 LTR88a 1 n.s 99.0 Moderately correlated
306 LTR9D 1 n.s 43.0 Weakly correlated
307 MER57B2 1 n.s 43.0 Weakly correlated
308 MER61-int 1 n.s 43.0 Weakly correlated
309 MER92C 1 * 99.0 Moderately correlated
310 MLT1J-int 1 n.s 99.0 Moderately correlated
311 MSTB 1 n.s 43.0 Weakly correlated
312 MSTC 1 n.s 74.0 Weakly correlated
313 X7C_LINE 1 n.s 319.0 Weakly correlated
314 ERV24B_Prim-int 1 n.s 74.0 Weakly correlated
315 ERV3-16A3_LTR 1 n.s 99.0 Moderately correlated
316 FRAM 1 n.s 74.0 Weakly correlated
317 HERV4_I-int 1 n.s 43.0 Weakly correlated
318 L1M4c 1 n.s 99.0 Moderately correlated
319 L1M8 1 n.s 99.0 Moderately correlated
320 L1MD1 1 n.s 99.0 Moderately correlated
321 L1MDb 1 n.s 99.0 Moderately correlated
322 L4_B_Mam 1 n.s 99.0 Moderately correlated
323 LTR19B 1 n.s 43.0 Weakly correlated
324 LTR26 1 n.s 74.0 Weakly correlated
325 LTR28B 1 n.s 43.0 Weakly correlated
326 LTR40c 1 n.s 99.0 Moderately correlated
327 MER51-int 1 n.s 43.0 Weakly correlated
328 MER61A 1 n.s 43.0 Weakly correlated
329 MER84 1 n.s 43.0 Weakly correlated
330 MLT1A 1 n.s 99.0 Moderately correlated
331 MLT2C1 1 n.s 99.0 Moderately correlated
332 MSTB-int 1 n.s 43.0 Weakly correlated
333 MamGypsy2-I 1 n.s 99.0 Moderately correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ERVL-E-INT 99.0 Moderately correlated
2 HAL1 99.0 Moderately correlated
3 HERVE-INT 19.6 Weakly correlated
4 L1M1 74.0 Weakly correlated
5 L1M4 99.0 Moderately correlated
6 L1MA4 87.0 Weakly correlated
7 L1MA9 99.0 Moderately correlated
8 L1MB2 99.0 Moderately correlated
9 L1MB3 99.0 Moderately correlated
10 L1MC1 99.0 Moderately correlated
11 L1MCA 99.0 Moderately correlated
12 L1MCB 99.0 Moderately correlated
13 L1ME1 99.0 Moderately correlated
14 L1ME3A 99.0 Moderately correlated
15 L1MEC 99.0 Moderately correlated
16 L1MED 99.0 Moderately correlated
17 L1MEF 99.0 Moderately correlated
18 L1PA7 74.0 Weakly correlated
19 L2 99.0 Moderately correlated
20 L2A 99.0 Moderately correlated
21 L3 99.0 Moderately correlated
22 LTR13 19.6 Weakly correlated
23 LTR13A 28.9 Weakly correlated
24 LTR13_ 28.9 Weakly correlated
25 LTR41 99.0 Moderately correlated
26 LTR43 74.0 Weakly correlated
27 LTR43B 74.0 Weakly correlated
28 MER21A 74.0 Weakly correlated
29 MER21B 99.0 Moderately correlated
30 MER21C 99.0 Moderately correlated
31 MER4-INT 74.0 Weakly correlated
32 MER74A 99.0 Moderately correlated
33 MLT1N2 99.0 Moderately correlated
34 MSTA 43.0 Weakly correlated
35 THE1A 43.0 Weakly correlated
36 THE1B 43.0 Weakly correlated
37 THE1C 43.0 Weakly correlated
38 THE1D 43.0 Weakly correlated