ZRdb KZFP & Repeats
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Human_ZNF506

  • Protein
    Zinc finger protein 506
  • Length
    444
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    28.9 Mya
  • Time of Changing in binding specificity
    28.9 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MGPLQFRDVAIEFSLEEWHCLDAAQRNLYRDVMLENYRNLIFLGIVVSKPNLITCLEQGKKPLTMKRHEMIAKPPVMYSHFAQDLWSEQSIKDSFQKVILRRYEKCRHDNLQLKKGCESVDECPVHKRGYNGLKQCLATTQRKIFQCDEYVKFLHKFSNSNKHKIRDTGKKSFKCIEYGKTFNQSSTRTTYKKIDAGEKRYKCEECGKAYKQSSHLTTHKKIHTGEKPYKCEECGKAYKQSCNLTTHKIIHTGEKPYRCRECGKAFNHPATLFSHKKIHTGEKPYKCDKCGKAFISSSTLTKHEIIHTGEKPYKCEECGKAFNRSSNLTKHKRIHTGDVPYKCDECGKTFTWYSSLSKHKRAHTGEKPYKCEECGKAFTAFSTLTEHKIIHTGEKPYKCEECGKAFNWSSALNKHKKIHIRQKPCIVKNVENLLNVPQPLISIR
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 4..75
2 C2h2 201..223
3 C2h2 229..251
4 C2h2 257..279
5 C2h2 285..307
6 C2h2 313..335
7 C2h2 341..363
8 C2h2 369..391
9 C2h2 397..419
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleolus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of DNA-templated transcription
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluJb 685 **** 74.0 Weakly correlated
2 AluJr 416 **** 74.0 Weakly correlated
3 AluSz 405 **** 74.0 Weakly correlated
4 AluSx 374 **** 74.0 Weakly correlated
5 AluJo 363 **** 74.0 Weakly correlated
6 AluSx1 333 **** 74.0 Weakly correlated
7 THE1B-int 287 **** 43.0 Moderately correlated
8 AluY 225 **** 74.0 Weakly correlated
9 AluSq2 181 **** 74.0 Weakly correlated
10 AluSz6 172 **** 74.0 Weakly correlated
11 L2a 160 n.s 99.0 Weakly correlated
12 THE1C-int 152 **** 43.0 Moderately correlated
13 FLAM_C 139 **** 74.0 Weakly correlated
14 MSTA-int 136 **** 43.0 Moderately correlated
15 AluSp 131 **** 74.0 Weakly correlated
16 THE1D-int 125 **** 28.9 Highly correlated
17 AluSg 116 **** 74.0 Weakly correlated
18 MIRb 114 n.s 99.0 Weakly correlated
19 L2c 96 n.s 99.0 Weakly correlated
20 AluJr4 95 **** 74.0 Weakly correlated
21 AluSc 95 **** 74.0 Weakly correlated
22 THE1A-int 91 **** 43.0 Moderately correlated
23 AluSx3 86 **** 74.0 Weakly correlated
24 L2b 86 * 99.0 Weakly correlated
25 MIR 81 n.s 99.0 Weakly correlated
26 MIR3 58 *** 99.0 Weakly correlated
27 AluSq 54 **** 74.0 Weakly correlated
28 MIRc 54 n.s 99.0 Weakly correlated
29 LTR8 52 **** 43.0 Moderately correlated
30 MLT1C 50 **** 94.0 Weakly correlated
31 L2 49 n.s 99.0 Weakly correlated
32 AluSc8 48 **** 74.0 Weakly correlated
33 L1MEc 46 * 99.0 Weakly correlated
34 HUERS-P1-int 45 **** 43.0 Moderately correlated
35 L1M5 42 n.s 99.0 Weakly correlated
36 LTR10F 42 **** 28.9 Highly correlated
37 MER52-int 41 **** 99.0 Weakly correlated
38 HUERS-P2-int 40 **** 43.0 Moderately correlated
39 LTR12C 38 **** 19.6 Weakly correlated
40 L1MB7 37 n.s 99.0 Weakly correlated
41 AluSx4 35 **** 74.0 Weakly correlated
42 L1MEd 35 n.s 99.0 Weakly correlated
43 MLT1D 35 n.s 99.0 Weakly correlated
44 L1M4 33 n.s 99.0 Weakly correlated
45 L1ME1 32 n.s 99.0 Weakly correlated
46 L1MEf 32 * 99.0 Weakly correlated
47 HAL1 29 n.s 99.0 Weakly correlated
48 LTR12D 29 **** 19.6 Weakly correlated
49 LTR13 29 **** 19.6 Weakly correlated
50 Alu 28 **** 74.0 Weakly correlated
51 MLT1A0 28 n.s 99.0 Weakly correlated
52 HERVIP10FH-int 27 **** 28.9 Highly correlated
53 MLT1A 27 **** 99.0 Weakly correlated
54 HERVIP10F-int 26 **** 28.9 Highly correlated
55 L1MB3 26 n.s 99.0 Weakly correlated
56 L1MC4 26 n.s 99.0 Weakly correlated
57 HERVIP10B3-int 25 **** 28.9 Highly correlated
58 LTR12F 25 **** 28.9 Highly correlated
59 MLT1H 25 **** 99.0 Weakly correlated
60 AluSc5 24 **** 74.0 Weakly correlated
61 L1PB1 24 n.s 74.0 Weakly correlated
62 L1PREC2 24 n.s 43.0 Moderately correlated
63 L3 24 n.s 99.0 Weakly correlated
64 L1MB8 23 n.s 99.0 Weakly correlated
65 MER52A 23 **** 74.0 Weakly correlated
66 MLT1K 23 * 99.0 Weakly correlated
67 HUERS-P3-int 22 **** 43.0 Moderately correlated
68 MER21C 21 *** 99.0 Weakly correlated
69 MLT1B 21 n.s 99.0 Weakly correlated
70 MSTB-int 21 **** 43.0 Moderately correlated
71 L1MA9 20 n.s 99.0 Weakly correlated
72 L1MC3 20 n.s 99.0 Weakly correlated
73 L1PA16 20 n.s 74.0 Weakly correlated
74 MER66B 20 **** 43.0 Moderately correlated
75 AluSg7 19 ** 74.0 Weakly correlated
76 FLAM_A 19 **** 74.0 Weakly correlated
77 MER4A1 19 **** 74.0 Weakly correlated
78 ERV3-16A3_I-int 18 n.s 99.0 Weakly correlated
79 L1MCa 18 n.s 99.0 Weakly correlated
80 LTR1A2 18 **** 43.0 Moderately correlated
81 L1M1 17 n.s 74.0 Weakly correlated
82 L1ME4b 17 n.s 99.0 Weakly correlated
83 L1PA10 17 n.s 74.0 Weakly correlated
84 L1PA15 17 n.s 74.0 Weakly correlated
85 MLT1J 17 n.s 99.0 Weakly correlated
86 AluSg4 16 ** 74.0 Weakly correlated
87 HERVH-int 16 n.s 28.9 Highly correlated
88 L1M2 16 n.s 99.0 Weakly correlated
89 L1MC5 16 n.s 99.0 Weakly correlated
90 L1ME4a 16 n.s 99.0 Weakly correlated
91 ERVL-B4-int 15 n.s 99.0 Weakly correlated
92 Harlequin-int 15 **** 74.0 Weakly correlated
93 L1MB4 15 n.s 99.0 Weakly correlated
94 L1MC1 15 n.s 99.0 Weakly correlated
95 L1PA3 15 n.s 19.6 Weakly correlated
96 MER4-int 15 ** 74.0 Weakly correlated
97 FRAM 14 **** 74.0 Weakly correlated
98 HERV9-int 14 **** 28.9 Highly correlated
99 L1MB5 14 n.s 99.0 Weakly correlated
100 L1MD 14 n.s 99.0 Weakly correlated
101 MIR1_Amn 14 **** 319.0 Weakly correlated
102 MLT1I 14 * 99.0 Weakly correlated
103 THE1D 14 n.s 43.0 Moderately correlated
104 L1MC4a 13 n.s 99.0 Weakly correlated
105 LTR10B1 13 **** 28.9 Highly correlated
106 LTR9 13 **** 43.0 Moderately correlated
107 LTR9D 13 **** 43.0 Moderately correlated
108 MER21B 13 *** 99.0 Weakly correlated
109 MER51A 13 **** 43.0 Moderately correlated
110 MLT1G1 13 *** 99.0 Weakly correlated
111 HERVI-int 12 **** 28.9 Highly correlated
112 L1MA4A 12 n.s 87.0 Weakly correlated
113 L1MC5a 12 n.s 99.0 Weakly correlated
114 L1MEg 12 n.s 99.0 Weakly correlated
115 L1PA5 12 n.s 19.6 Weakly correlated
116 LTR8A 12 **** 43.0 Moderately correlated
117 MER21A 12 **** 74.0 Weakly correlated
118 MSTA 12 n.s 43.0 Moderately correlated
119 ERVL-E-int 11 n.s 99.0 Weakly correlated
120 HERV35I-int 11 **** 43.0 Moderately correlated
121 L1M3 11 n.s 99.0 Weakly correlated
122 L1MA3 11 n.s 74.0 Weakly correlated
123 L1MA4 11 n.s 87.0 Weakly correlated
124 L1MA8 11 n.s 87.0 Weakly correlated
125 L1MB2 11 n.s 99.0 Weakly correlated
126 L1MD1 11 n.s 99.0 Weakly correlated
127 L1ME2 11 n.s 99.0 Weakly correlated
128 L1ME3B 11 n.s 99.0 Weakly correlated
129 LTR10G 11 **** 28.9 Highly correlated
130 MER41-int 11 ** 74.0 Weakly correlated
131 MER52C 11 **** 74.0 Weakly correlated
132 MLT1F2 11 n.s 99.0 Weakly correlated
133 MLT1J2 11 * 99.0 Weakly correlated
134 THE1B 11 n.s 43.0 Moderately correlated
135 AluYh3 10 **** 15.2 Weakly correlated
136 L1MCb 10 ** 99.0 Weakly correlated
137 L1MDa 10 n.s 99.0 Weakly correlated
138 L1ME3G 10 n.s 99.0 Weakly correlated
139 L1PA11 10 n.s 74.0 Weakly correlated
140 L1PA14 10 n.s 74.0 Weakly correlated
141 L1PA7 10 n.s 74.0 Weakly correlated
142 LTR16C 10 n.s 99.0 Weakly correlated
143 LTR9A1 10 **** 43.0 Moderately correlated
144 MER52D 10 **** 74.0 Weakly correlated
145 HERV9N-int 9 **** 19.6 Weakly correlated
146 HERV9NC-int 9 *** 19.6 Weakly correlated
147 HERVP71A-int 9 **** 43.0 Moderately correlated
148 HUERS-P3b-int 9 **** 43.0 Moderately correlated
149 L1PA17 9 n.s 74.0 Weakly correlated
150 L1PB2 9 n.s 74.0 Weakly correlated
151 LTR10B2 9 **** 28.9 Highly correlated
152 LTR33 9 n.s 99.0 Weakly correlated
153 LTR8B 9 *** 43.0 Moderately correlated
154 MER31-int 9 **** 99.0 Weakly correlated
155 MER66A 9 **** 43.0 Moderately correlated
156 MLT1E2 9 n.s 99.0 Weakly correlated
157 MSTB 9 n.s 43.0 Moderately correlated
158 HERV3-int 8 **** 28.9 Highly correlated
159 HERVK11-int 8 **** 28.9 Highly correlated
160 L1M4c 8 n.s 99.0 Weakly correlated
161 L1MA2 8 n.s 74.0 Weakly correlated
162 L1ME2z 8 n.s 99.0 Weakly correlated
163 L1PA12 8 n.s 74.0 Weakly correlated
164 L1PA13 8 n.s 74.0 Weakly correlated
165 LTR10A 8 **** 28.9 Highly correlated
166 LTR2 8 **** 28.9 Highly correlated
167 LTR27D 8 **** 43.0 Moderately correlated
168 LTR27E 8 **** 43.0 Moderately correlated
169 MER9a3 8 **** 28.9 Highly correlated
170 MLT1A1 8 n.s 87.0 Weakly correlated
171 MLT1G 8 ** 99.0 Weakly correlated
172 MLT1G3 8 ** 99.0 Weakly correlated
173 MLT1H2 8 * 99.0 Weakly correlated
174 MLT1N2 8 * 99.0 Weakly correlated
175 HERVK9-int 7 n.s 28.9 Highly correlated
176 HERVL-int 7 n.s 74.0 Weakly correlated
177 L1MD2 7 n.s 99.0 Weakly correlated
178 L1MD3 7 n.s 99.0 Weakly correlated
179 L1ME3Cz 7 n.s 99.0 Weakly correlated
180 L1PA2 7 n.s 15.2 Weakly correlated
181 L1PA4 7 n.s 19.6 Weakly correlated
182 L1PB4 7 n.s 99.0 Weakly correlated
183 L4_A_Mam 7 n.s 99.0 Weakly correlated
184 LOR1-int 7 ** 74.0 Weakly correlated
185 LTR16A 7 n.s 99.0 Weakly correlated
186 LTR25-int 7 ** 43.0 Moderately correlated
187 LTR55 7 **** 99.0 Weakly correlated
188 MLT1E1A 7 n.s 99.0 Weakly correlated
189 MLT1F1 7 * 99.0 Weakly correlated
190 MLT2A1 7 n.s 74.0 Weakly correlated
191 SVA_A 7 *** 19.6 Weakly correlated
192 THE1C 7 n.s 43.0 Moderately correlated
193 HAL1ME 6 n.s 99.0 Weakly correlated
194 L1M3e 6 ** 99.0 Weakly correlated
195 L1M4b 6 n.s 99.0 Weakly correlated
196 L1MA1 6 n.s 74.0 Weakly correlated
197 L1MA6 6 n.s 87.0 Weakly correlated
198 L1MB1 6 n.s 99.0 Weakly correlated
199 L1MC2 6 n.s 99.0 Weakly correlated
200 L1MDb 6 ** 99.0 Weakly correlated
201 L1ME3 6 n.s 99.0 Weakly correlated
202 L1ME3A 6 n.s 99.0 Weakly correlated
203 L1MEi 6 n.s 99.0 Weakly correlated
204 LTR12 6 ** 28.9 Highly correlated
205 LTR1A1 6 **** 43.0 Moderately correlated
206 LTR1E 6 **** 43.0 Moderately correlated
207 LTR4 6 **** 28.9 Highly correlated
208 LTR41 6 *** 99.0 Weakly correlated
209 MER34A1 6 **** 99.0 Weakly correlated
210 MER39 6 n.s 74.0 Weakly correlated
211 MER61-int 6 n.s 43.0 Moderately correlated
212 MER76 6 *** 99.0 Weakly correlated
213 MER77 6 ** 99.0 Weakly correlated
214 MLT1F 6 n.s 99.0 Weakly correlated
215 MLT1O 6 * 99.0 Weakly correlated
216 MLT2B3 6 n.s 99.0 Weakly correlated
217 THE1A 6 n.s 43.0 Moderately correlated
218 AluSq4 5 * 74.0 Weakly correlated
219 AluYc 5 n.s 74.0 Weakly correlated
220 AluYk11 5 **** 15.2 Weakly correlated
221 AluYk3 5 ** 19.6 Weakly correlated
222 AluYm1 5 n.s 19.6 Weakly correlated
223 FAM 5 * 87.0 Weakly correlated
224 HERV4_I-int 5 *** 43.0 Moderately correlated
225 L1MA5A 5 n.s 87.0 Weakly correlated
226 L1MC 5 n.s 99.0 Weakly correlated
227 L1PA15-16 5 n.s 74.0 Weakly correlated
228 L1PA6 5 n.s 28.9 Highly correlated
229 L1PBa 5 n.s 74.0 Weakly correlated
230 L3b 5 n.s 99.0 Weakly correlated
231 LTR12E 5 **** 19.6 Weakly correlated
232 LTR16A1 5 n.s 99.0 Weakly correlated
233 LTR16B2 5 * 99.0 Weakly correlated
234 LTR16E1 5 * 99.0 Weakly correlated
235 LTR16E2 5 * 99.0 Weakly correlated
236 LTR19A 5 **** 43.0 Moderately correlated
237 LTR1C1 5 **** 43.0 Moderately correlated
238 LTR27C 5 **** 43.0 Moderately correlated
239 LTR67B 5 n.s 99.0 Weakly correlated
240 LTR71A 5 **** 43.0 Moderately correlated
241 LTR9C 5 **** 43.0 Moderately correlated
242 MER41A 5 n.s 74.0 Weakly correlated
243 MER57-int 5 n.s 87.0 Weakly correlated
244 MER66C 5 **** 43.0 Moderately correlated
245 MER68 5 * 99.0 Weakly correlated
246 MLT1L 5 n.s 99.0 Weakly correlated
247 MSTB1 5 n.s 74.0 Weakly correlated
248 MamGypLTR3 5 **** 99.0 Weakly correlated
249 AluYa5 4 n.s 15.2 Weakly correlated
250 AluYf1 4 n.s 19.6 Weakly correlated
251 AluYj4 4 n.s 0.0 Weakly correlated
252 HERVE-int 4 n.s 19.6 Weakly correlated
253 L1M2a 4 * 87.0 Weakly correlated
254 L1MA5 4 n.s 87.0 Weakly correlated
255 L1MCc 4 n.s 99.0 Weakly correlated
256 L1ME3C 4 n.s 99.0 Weakly correlated
257 L1MEb 4 n.s 99.0 Weakly correlated
258 L1MEh 4 n.s 99.0 Weakly correlated
259 L1P4 4 n.s 74.0 Weakly correlated
260 L1PA8 4 n.s 74.0 Weakly correlated
261 L1PBa1 4 n.s 74.0 Weakly correlated
262 L4_C_Mam 4 n.s 99.0 Weakly correlated
263 LTR16 4 n.s 99.0 Weakly correlated
264 LTR1F 4 **** 43.0 Moderately correlated
265 LTR28C 4 ** 43.0 Moderately correlated
266 LTR2B 4 *** 19.6 Weakly correlated
267 LTR45B 4 *** 74.0 Weakly correlated
268 LTR54B 4 ** 74.0 Weakly correlated
269 LTR78 4 n.s 99.0 Weakly correlated
270 LTR84b 4 ** 99.0 Weakly correlated
271 MER41B 4 n.s 74.0 Weakly correlated
272 MER4B 4 n.s 74.0 Weakly correlated
273 MER4D0 4 *** 74.0 Weakly correlated
274 MER61D 4 **** 43.0 Moderately correlated
275 MER77B 4 * 99.0 Weakly correlated
276 MER83B-int 4 *** 99.0 Weakly correlated
277 MLT1E3 4 n.s 99.0 Weakly correlated
278 MSTC 4 n.s 74.0 Weakly correlated
279 MSTD 4 n.s 74.0 Weakly correlated
280 MamGypLTR3a 4 ** 99.0 Weakly correlated
281 MamRTE1 4 n.s 99.0 Weakly correlated
282 PRIMA4_LTR 4 *** 74.0 Weakly correlated
283 THE1-int 4 **** 43.0 Moderately correlated
284 AluSq10 3 n.s 74.0 Weakly correlated
285 AluYb8 3 n.s 15.2 Weakly correlated
286 HERV1_I-int 3 *** 43.0 Moderately correlated
287 HERVE_a-int 3 * 28.9 Highly correlated
288 HERVK-int 3 n.s 28.9 Highly correlated
289 HERVL18-int 3 n.s 43.0 Moderately correlated
290 L1M4a2 3 n.s 99.0 Weakly correlated
291 L1MA7 3 n.s 87.0 Weakly correlated
292 L1ME3D 3 n.s 99.0 Weakly correlated
293 L1ME3E 3 n.s 99.0 Weakly correlated
294 L1ME3F 3 n.s 99.0 Weakly correlated
295 L1P3 3 n.s 74.0 Weakly correlated
296 LOR1b 3 n.s 74.0 Weakly correlated
297 LTR1 3 ** 43.0 Moderately correlated
298 LTR10E 3 ** 28.9 Highly correlated
299 LTR19C 3 *** 43.0 Moderately correlated
300 LTR2752 3 ** 43.0 Moderately correlated
301 LTR33A_ 3 n.s 99.0 Weakly correlated
302 LTR50 3 n.s 99.0 Weakly correlated
303 LTR53 3 ** 99.0 Weakly correlated
304 LTR54 3 * 74.0 Weakly correlated
305 LTR71B 3 *** 43.0 Moderately correlated
306 LTR77 3 **** 94.0 Weakly correlated
307 LTR79 3 n.s 99.0 Weakly correlated
308 LTR88b 3 * 99.0 Weakly correlated
309 MER31B 3 n.s 99.0 Weakly correlated
310 MER34 3 * 87.0 Weakly correlated
311 MER4B-int 3 n.s 99.0 Weakly correlated
312 MER4D1 3 n.s 74.0 Weakly correlated
313 MER50 3 n.s 43.0 Moderately correlated
314 MER51-int 3 n.s 43.0 Moderately correlated
315 MER51C 3 *** 43.0 Moderately correlated
316 MER54B 3 ** 87.0 Weakly correlated
317 MER57F 3 ** 74.0 Weakly correlated
318 MER9a1 3 ** 19.6 Weakly correlated
319 MER9a2 3 ** 19.6 Weakly correlated
320 MLT1A0-int 3 n.s 99.0 Weakly correlated
321 MLT1H1 3 n.s 99.0 Weakly correlated
322 MLT1J1 3 n.s 99.0 Weakly correlated
323 MLT2A2 3 n.s 74.0 Weakly correlated
324 MLT2B1 3 n.s 99.0 Weakly correlated
325 MLT2C1 3 n.s 99.0 Weakly correlated
326 MLT2D 3 n.s 99.0 Weakly correlated
327 MLT2F 3 n.s 99.0 Weakly correlated
328 MST-int 3 *** 74.0 Weakly correlated
329 MamSINE1 3 n.s 99.0 Weakly correlated
330 SVA_B 3 n.s 15.2 Weakly correlated
331 AluYg6 2 * 15.2 Weakly correlated
332 AmnSINE1 2 n.s 319.0 Weakly correlated
333 ERV3-16A3_LTR 2 n.s 99.0 Weakly correlated
334 ERVL-int 2 n.s 99.0 Weakly correlated
335 HAL1M8 2 n.s 99.0 Weakly correlated
336 HAL1b 2 n.s 99.0 Weakly correlated
337 HERV16-int 2 n.s 99.0 Weakly correlated
338 HERV1_LTRe 2 **** 43.0 Moderately correlated
339 HERVFH19-int 2 * 43.0 Moderately correlated
340 L1HS 2 n.s 8.6 Weakly correlated
341 L1M3b 2 n.s 99.0 Weakly correlated
342 L1M4a1 2 n.s 99.0 Weakly correlated
343 L1MA10 2 n.s 99.0 Weakly correlated
344 L1ME4c 2 n.s 99.0 Weakly correlated
345 L1ME5 2 n.s 99.0 Weakly correlated
346 L1MEg1 2 n.s 99.0 Weakly correlated
347 L1P1 2 n.s 19.6 Weakly correlated
348 L1P4a 2 n.s 74.0 Weakly correlated
349 L1P4d 2 * 74.0 Weakly correlated
350 L1PA8A 2 n.s 74.0 Weakly correlated
351 L4_B_Mam 2 n.s 99.0 Weakly correlated
352 LFSINE_Vert 2 n.s 319.0 Weakly correlated
353 LTR18A 2 ** 43.0 Moderately correlated
354 LTR18C 2 **** 43.0 Moderately correlated
355 LTR26 2 n.s 74.0 Weakly correlated
356 LTR27B 2 ** 43.0 Moderately correlated
357 LTR28 2 ** 43.0 Moderately correlated
358 LTR28B 2 * 43.0 Moderately correlated
359 LTR2C 2 ** 19.6 Weakly correlated
360 LTR32 2 n.s 43.0 Moderately correlated
361 LTR33A 2 n.s 99.0 Weakly correlated
362 LTR33B 2 n.s 99.0 Weakly correlated
363 LTR33C 2 n.s 99.0 Weakly correlated
364 LTR39 2 n.s 43.0 Moderately correlated
365 LTR40a 2 n.s 99.0 Weakly correlated
366 LTR41B 2 n.s 99.0 Weakly correlated
367 LTR45 2 ** 99.0 Weakly correlated
368 LTR47A 2 * 74.0 Weakly correlated
369 LTR49-int 2 n.s 74.0 Weakly correlated
370 LTR56 2 n.s 74.0 Weakly correlated
371 LTR78B 2 n.s 99.0 Weakly correlated
372 LTR81 2 ** 99.0 Weakly correlated
373 LTR81B 2 n.s 99.0 Weakly correlated
374 LTR87 2 * 99.0 Weakly correlated
375 LTR88c 2 * 99.0 Weakly correlated
376 LTR89 2 * 99.0 Weakly correlated
377 MER110A 2 * 99.0 Weakly correlated
378 MER21-int 2 n.s 99.0 Weakly correlated
379 MER34B-int 2 * 99.0 Weakly correlated
380 MER4CL34 2 n.s 43.0 Moderately correlated
381 MER4E1 2 n.s 74.0 Weakly correlated
382 MER50-int 2 n.s 43.0 Moderately correlated
383 MER57A-int 2 n.s 43.0 Moderately correlated
384 MER61E 2 * 43.0 Moderately correlated
385 MER66-int 2 n.s 43.0 Moderately correlated
386 MER67C 2 n.s 99.0 Weakly correlated
387 MER67D 2 n.s 99.0 Weakly correlated
388 MER74A 2 n.s 99.0 Weakly correlated
389 MER74B 2 n.s 99.0 Weakly correlated
390 MER89-int 2 n.s 99.0 Weakly correlated
391 MLT-int 2 * 99.0 Weakly correlated
392 MLT1E 2 n.s 99.0 Weakly correlated
393 MLT1E1 2 n.s 99.0 Weakly correlated
394 MLT2B4 2 n.s 99.0 Weakly correlated
395 MSTB1-int 2 * 74.0 Weakly correlated
396 MamGypLTR1a 2 n.s 99.0 Weakly correlated
397 MamGypLTR1b 2 n.s 99.0 Weakly correlated
398 MamGypsy2-LTR 2 ** 99.0 Weakly correlated
399 PABL_B-int 2 * 74.0 Weakly correlated
400 Plat_L3 2 n.s 99.0 Weakly correlated
401 SVA_C 2 n.s 15.2 Weakly correlated
402 SVA_F 2 n.s 0.0 Weakly correlated
403 AluYb9 1 n.s 15.2 Weakly correlated
404 AluYh3a3 1 * 15.2 Weakly correlated
405 AluYh9 1 ** 15.2 Weakly correlated
406 HERV15-int 1 n.s 28.9 Highly correlated
407 HERV17-int 1 n.s 28.9 Highly correlated
408 HERV1_LTRa 1 *** 28.9 Highly correlated
409 HERV1_LTRb 1 *** 28.9 Highly correlated
410 HERV1_LTRc 1 ** 28.9 Highly correlated
411 HERVK14-int 1 n.s 28.9 Highly correlated
412 HERVL40-int 1 n.s 99.0 Weakly correlated
413 HERVL66-int 1 n.s 43.0 Moderately correlated
414 HERVL74-int 1 n.s 99.0 Weakly correlated
415 L1M2c 1 n.s 87.0 Weakly correlated
416 L1M3c 1 n.s 99.0 Weakly correlated
417 L1M3d 1 n.s 99.0 Weakly correlated
418 L1M3f 1 n.s 87.0 Weakly correlated
419 L1M7 1 n.s 99.0 Weakly correlated
420 L1MEa 1 n.s 99.0 Weakly correlated
421 L1MEg2 1 n.s 99.0 Weakly correlated
422 L1P2 1 n.s 28.9 Highly correlated
423 L1P4e 1 n.s 74.0 Weakly correlated
424 L1PB 1 n.s 74.0 Weakly correlated
425 L1PBb 1 n.s 74.0 Weakly correlated
426 L2-1_AMi 1 n.s 319.0 Weakly correlated
427 L2-3_Crp 1 n.s 431.0 Weakly correlated
428 L5 1 n.s 99.0 Weakly correlated
429 LTR102_Mam 1 n.s 99.0 Weakly correlated
430 LTR103_Mam 1 n.s 99.0 Weakly correlated
431 LTR104_Mam 1 n.s 99.0 Weakly correlated
432 LTR10B 1 ** 28.9 Highly correlated
433 LTR10C 1 n.s 28.9 Highly correlated
434 LTR12_ 1 n.s 28.9 Highly correlated
435 LTR13A 1 n.s 28.9 Highly correlated
436 LTR15 1 n.s 28.9 Highly correlated
437 LTR16A2 1 n.s 99.0 Weakly correlated
438 LTR16D2 1 n.s 99.0 Weakly correlated
439 LTR1B0 1 * 43.0 Moderately correlated
440 LTR1C3 1 ** 43.0 Moderately correlated
441 LTR1D 1 n.s 43.0 Moderately correlated
442 LTR1F2 1 * 43.0 Moderately correlated
443 LTR22B1 1 * 28.9 Highly correlated
444 LTR23 1 n.s 74.0 Weakly correlated
445 LTR25 1 n.s 43.0 Moderately correlated
446 LTR26C 1 n.s 0.0 Weakly correlated
447 LTR31 1 n.s 74.0 Weakly correlated
448 LTR35A 1 ** 43.0 Moderately correlated
449 LTR37B 1 n.s 99.0 Weakly correlated
450 LTR38A1 1 * 74.0 Weakly correlated
451 LTR40b 1 n.s 99.0 Weakly correlated
452 LTR41C 1 n.s 99.0 Weakly correlated
453 LTR45C 1 n.s 99.0 Weakly correlated
454 LTR47B2 1 * 74.0 Weakly correlated
455 LTR48B 1 n.s 74.0 Weakly correlated
456 LTR49 1 n.s 74.0 Weakly correlated
457 LTR52 1 n.s 99.0 Weakly correlated
458 LTR53B 1 * 99.0 Weakly correlated
459 LTR5B 1 n.s 28.9 Highly correlated
460 LTR66 1 n.s 43.0 Moderately correlated
461 LTR6A 1 n.s 28.9 Highly correlated
462 LTR7 1 n.s 19.6 Weakly correlated
463 LTR72B 1 * 74.0 Weakly correlated
464 LTR75_1 1 * 99.0 Weakly correlated
465 LTR76 1 n.s 74.0 Weakly correlated
466 LTR7B 1 n.s 28.9 Highly correlated
467 LTR7C 1 n.s 28.9 Highly correlated
468 LTR7Y 1 * 8.6 Weakly correlated
469 LTR80B 1 n.s 99.0 Weakly correlated
470 LTR82A 1 n.s 99.0 Weakly correlated
471 LTR85a 1 n.s 99.0 Weakly correlated
472 LTR86A2 1 * 99.0 Weakly correlated
473 LTR86B1 1 * 99.0 Weakly correlated
474 LTR88a 1 n.s 99.0 Weakly correlated
475 LTR9B 1 n.s 43.0 Moderately correlated
476 MER101 1 n.s 74.0 Weakly correlated
477 MER101-int 1 n.s 74.0 Weakly correlated
478 MER101B 1 * 87.0 Weakly correlated
479 MER11C 1 n.s 19.6 Weakly correlated
480 MER11D 1 n.s 19.6 Weakly correlated
481 MER34-int 1 n.s 99.0 Weakly correlated
482 MER34A 1 n.s 99.0 Weakly correlated
483 MER34B 1 n.s 87.0 Weakly correlated
484 MER34C2 1 n.s 74.0 Weakly correlated
485 MER39B 1 n.s 74.0 Weakly correlated
486 MER41D 1 n.s 74.0 Weakly correlated
487 MER41G 1 * 74.0 Weakly correlated
488 MER4A 1 n.s 74.0 Weakly correlated
489 MER4A1_ 1 n.s 74.0 Weakly correlated
490 MER51B 1 n.s 43.0 Moderately correlated
491 MER51E 1 * 43.0 Moderately correlated
492 MER57B1 1 n.s 43.0 Moderately correlated
493 MER61A 1 n.s 43.0 Moderately correlated
494 MER61F 1 * 43.0 Moderately correlated
495 MER65-int 1 n.s 87.0 Weakly correlated
496 MER66D 1 * 43.0 Moderately correlated
497 MER67A 1 n.s 99.0 Weakly correlated
498 MER68B 1 n.s 99.0 Weakly correlated
499 MER68C 1 * 99.0 Weakly correlated
500 MER72 1 n.s 43.0 Moderately correlated
501 MER72B 1 * 43.0 Moderately correlated
502 MER83C 1 * 43.0 Moderately correlated
503 MER89 1 n.s 99.0 Weakly correlated
504 MER90 1 n.s 99.0 Weakly correlated
505 MER90a 1 n.s 99.0 Weakly correlated
506 MER92-int 1 n.s 99.0 Weakly correlated
507 MER92D 1 * 99.0 Weakly correlated
508 MLT1-int 1 * 99.0 Weakly correlated
509 MLT1A-int 1 n.s 99.0 Weakly correlated
510 MLT1A1-int 1 n.s 87.0 Weakly correlated
511 MLT1D-int 1 n.s 99.0 Weakly correlated
512 MLT1E1A-int 1 ** 99.0 Weakly correlated
513 MLT1F1-int 1 * 99.0 Weakly correlated
514 MLT1I-int 1 n.s 99.0 Weakly correlated
515 MLT1J-int 1 n.s 99.0 Weakly correlated
516 MLT1J2-int 1 n.s 99.0 Weakly correlated
517 MLT1K-int 1 * 99.0 Weakly correlated
518 MLT1M 1 n.s 99.0 Weakly correlated
519 MLT2B2 1 n.s 99.0 Weakly correlated
520 MSTB2 1 n.s 74.0 Weakly correlated
521 MSTB2-int 1 * 74.0 Weakly correlated
522 MSTC-int 1 n.s 74.0 Weakly correlated
523 MSTD-int 1 n.s 74.0 Weakly correlated
524 MamGyp-int 1 n.s 99.0 Weakly correlated
525 MamRep1151 1 n.s 99.0 Weakly correlated
526 MamRep605 1 n.s 99.0 Weakly correlated
527 PRIMA41-int 1 n.s 74.0 Weakly correlated
528 PRIMAX-int 1 ** 74.0 Weakly correlated
529 SVA_D 1 n.s 15.2 Weakly correlated
530 X9_LINE 1 * 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluJb 567 **** 74.0 Weakly correlated
2 AluJr 350 **** 74.0 Weakly correlated
3 AluJo 327 **** 74.0 Weakly correlated
4 AluSz 311 **** 74.0 Weakly correlated
5 AluSx 275 **** 74.0 Weakly correlated
6 THE1B-int 273 **** 43.0 Moderately correlated
7 AluSx1 248 **** 74.0 Weakly correlated
8 THE1C-int 145 **** 43.0 Moderately correlated
9 AluSz6 144 **** 74.0 Weakly correlated
10 AluY 134 n.s 74.0 Weakly correlated
11 AluSq2 130 **** 74.0 Weakly correlated
12 MSTA-int 126 **** 43.0 Moderately correlated
13 THE1D-int 120 **** 28.9 Highly correlated
14 FLAM_C 119 **** 74.0 Weakly correlated
15 AluSp 102 **** 74.0 Weakly correlated
16 AluSg 84 **** 74.0 Weakly correlated
17 THE1A-int 84 **** 43.0 Moderately correlated
18 AluSc 72 **** 74.0 Weakly correlated
19 AluJr4 72 **** 74.0 Weakly correlated
20 AluSx3 71 **** 74.0 Weakly correlated
21 L2a 59 n.s 99.0 Weakly correlated
22 MLT1C 39 *** 94.0 Weakly correlated
23 HUERS-P1-int 39 **** 43.0 Moderately correlated
24 AluSq 38 *** 74.0 Weakly correlated
25 L2c 38 n.s 99.0 Weakly correlated
26 L2b 35 n.s 99.0 Weakly correlated
27 MER52-int 34 **** 99.0 Weakly correlated
28 HERVIP10FH-int 26 **** 28.9 Highly correlated
29 AluSx4 26 *** 74.0 Weakly correlated
30 AluSc8 25 n.s 74.0 Weakly correlated
31 MIRb 24 n.s 99.0 Weakly correlated
32 HUERS-P2-int 23 **** 43.0 Moderately correlated
33 Alu 22 **** 74.0 Weakly correlated
34 HERVIP10F-int 22 **** 28.9 Highly correlated
35 MLT1D 22 n.s 99.0 Weakly correlated
36 MSTB-int 21 **** 43.0 Moderately correlated
37 MLT1A 20 *** 99.0 Weakly correlated
38 MER66B 19 **** 43.0 Moderately correlated
39 L2 18 n.s 99.0 Weakly correlated
40 MIR3 18 n.s 99.0 Weakly correlated
41 HERVIP10B3-int 16 **** 28.9 Highly correlated
42 AluSc5 16 ** 74.0 Weakly correlated
43 L1PB1 16 n.s 74.0 Weakly correlated
44 MLT1A0 15 n.s 99.0 Weakly correlated
45 MER4A1 15 **** 74.0 Weakly correlated
46 MER21C 14 * 99.0 Weakly correlated
47 MIR 13 n.s 99.0 Weakly correlated
48 MER21B 12 ** 99.0 Weakly correlated
49 LTR12C 12 n.s 19.6 Weakly correlated
50 ERV3-16A3_I-int 12 n.s 99.0 Weakly correlated
51 MIRc 11 n.s 99.0 Weakly correlated
52 MLT1G1 11 ** 99.0 Weakly correlated
53 AluSg7 11 n.s 74.0 Weakly correlated
54 L1PREC2 11 n.s 43.0 Moderately correlated
55 MER52A 11 * 74.0 Weakly correlated
56 MLT1H 11 n.s 99.0 Weakly correlated
57 L1PA10 11 n.s 74.0 Weakly correlated
58 L1PA16 10 n.s 74.0 Weakly correlated
59 LTR16C 10 n.s 99.0 Weakly correlated
60 MLT1B 10 n.s 99.0 Weakly correlated
61 L1MEf 10 n.s 99.0 Weakly correlated
62 AluSg4 10 n.s 74.0 Weakly correlated
63 L1MEc 10 n.s 99.0 Weakly correlated
64 MLT1I 10 n.s 99.0 Weakly correlated
65 HAL1 10 n.s 99.0 Weakly correlated
66 HERVH-int 9 n.s 28.9 Highly correlated
67 MER21A 9 *** 74.0 Weakly correlated
68 Harlequin-int 9 ** 74.0 Weakly correlated
69 MLT1K 9 n.s 99.0 Weakly correlated
70 L1MC3 9 n.s 99.0 Weakly correlated
71 L1MEd 9 n.s 99.0 Weakly correlated
72 ERVL-B4-int 9 n.s 99.0 Weakly correlated
73 FRAM 9 ** 74.0 Weakly correlated
74 L1M4 9 n.s 99.0 Weakly correlated
75 HERV3-int 8 **** 28.9 Highly correlated
76 HERV35I-int 8 **** 43.0 Moderately correlated
77 L1ME1 8 n.s 99.0 Weakly correlated
78 LTR9D 8 **** 43.0 Moderately correlated
79 L1MA9 8 n.s 99.0 Weakly correlated
80 L1MB7 8 n.s 99.0 Weakly correlated
81 L1PA12 8 n.s 74.0 Weakly correlated
82 ERVL-E-int 8 n.s 99.0 Weakly correlated
83 FLAM_A 8 n.s 74.0 Weakly correlated
84 MLT1J 8 n.s 99.0 Weakly correlated
85 L1MCa 7 n.s 99.0 Weakly correlated
86 HERVI-int 7 **** 28.9 Highly correlated
87 MLT1F2 7 n.s 99.0 Weakly correlated
88 HERV9NC-int 7 ** 19.6 Weakly correlated
89 HERVK11-int 7 *** 28.9 Highly correlated
90 MER66A 7 **** 43.0 Moderately correlated
91 L1MA4A 7 n.s 87.0 Weakly correlated
92 L1PA15 7 n.s 74.0 Weakly correlated
93 MLT1E2 7 n.s 99.0 Weakly correlated
94 LTR55 6 **** 99.0 Weakly correlated
95 L1MC4 6 n.s 99.0 Weakly correlated
96 L1PA11 6 n.s 74.0 Weakly correlated
97 L1PA17 6 n.s 74.0 Weakly correlated
98 HERVP71A-int 6 *** 43.0 Moderately correlated
99 LTR27E 6 **** 43.0 Moderately correlated
100 LTR12D 6 ** 19.6 Weakly correlated
101 MER41-int 6 n.s 74.0 Weakly correlated
102 L1PA13 5 n.s 74.0 Weakly correlated
103 HUERS-P3-int 5 * 43.0 Moderately correlated
104 MER68 5 * 99.0 Weakly correlated
105 MER9a3 5 *** 28.9 Highly correlated
106 MLT2A1 5 n.s 74.0 Weakly correlated
107 LTR9A1 5 *** 43.0 Moderately correlated
108 THE1A 5 n.s 43.0 Moderately correlated
109 MIR1_Amn 5 n.s 319.0 Weakly correlated
110 L1M1 5 n.s 74.0 Weakly correlated
111 L1MC5a 5 n.s 99.0 Weakly correlated
112 MLT1J2 5 n.s 99.0 Weakly correlated
113 HERVK9-int 5 n.s 28.9 Highly correlated
114 L1PA7 5 n.s 74.0 Weakly correlated
115 L1PA14 5 n.s 74.0 Weakly correlated
116 LTR16E1 5 * 99.0 Weakly correlated
117 MLT1F1 5 n.s 99.0 Weakly correlated
118 L3 4 n.s 99.0 Weakly correlated
119 LTR13 4 * 19.6 Weakly correlated
120 L1MC1 4 n.s 99.0 Weakly correlated
121 LTR16B2 4 * 99.0 Weakly correlated
122 AluYh3 4 n.s 15.2 Weakly correlated
123 L1M3e 4 n.s 99.0 Weakly correlated
124 L1MDa 4 n.s 99.0 Weakly correlated
125 MER66C 4 *** 43.0 Moderately correlated
126 MER76 4 ** 99.0 Weakly correlated
127 AluSq4 4 n.s 74.0 Weakly correlated
128 HERV9-int 4 n.s 28.9 Highly correlated
129 THE1B 4 n.s 43.0 Moderately correlated
130 HERVL-int 4 n.s 74.0 Weakly correlated
131 L1MB2 4 n.s 99.0 Weakly correlated
132 L1PB4 4 n.s 99.0 Weakly correlated
133 L1PBa 4 n.s 74.0 Weakly correlated
134 LTR16E2 4 n.s 99.0 Weakly correlated
135 LTR45B 4 *** 74.0 Weakly correlated
136 MLT1H2 4 n.s 99.0 Weakly correlated
137 AluYf1 4 n.s 19.6 Weakly correlated
138 L1PB2 4 n.s 74.0 Weakly correlated
139 MLT1N2 4 n.s 99.0 Weakly correlated
140 THE1-int 4 **** 43.0 Moderately correlated
141 L1MB4 4 n.s 99.0 Weakly correlated
142 LTR4 4 **** 28.9 Highly correlated
143 MER77B 4 * 99.0 Weakly correlated
144 MLT1E1A 4 n.s 99.0 Weakly correlated
145 PRIMA4_LTR 4 *** 74.0 Weakly correlated
146 L1MEb 4 n.s 99.0 Weakly correlated
147 LTR25-int 4 n.s 43.0 Moderately correlated
148 MLT1O 4 n.s 99.0 Weakly correlated
149 MLT2B3 4 n.s 99.0 Weakly correlated
150 L1M2 3 n.s 99.0 Weakly correlated
151 LTR27C 3 *** 43.0 Moderately correlated
152 MER51A 3 n.s 43.0 Moderately correlated
153 MST-int 3 *** 74.0 Weakly correlated
154 MLT1G3 3 n.s 99.0 Weakly correlated
155 L1MCb 3 n.s 99.0 Weakly correlated
156 LTR50 3 n.s 99.0 Weakly correlated
157 MER57F 3 ** 74.0 Weakly correlated
158 SVA_A 3 n.s 19.6 Weakly correlated
159 AluYc 3 n.s 74.0 Weakly correlated
160 L1MA4 3 n.s 87.0 Weakly correlated
161 L1PA15-16 3 n.s 74.0 Weakly correlated
162 L1PA3 3 n.s 19.6 Weakly correlated
163 MLT1A1 3 n.s 87.0 Weakly correlated
164 MLT2C1 3 n.s 99.0 Weakly correlated
165 HUERS-P3b-int 3 n.s 43.0 Moderately correlated
166 L1MA2 3 n.s 74.0 Weakly correlated
167 L1MB5 3 n.s 99.0 Weakly correlated
168 MER34 3 * 87.0 Weakly correlated
169 MLT1F 3 n.s 99.0 Weakly correlated
170 MSTB 3 n.s 43.0 Moderately correlated
171 AluYk11 3 *** 15.2 Weakly correlated
172 L1ME3A 3 n.s 99.0 Weakly correlated
173 MER39 3 n.s 74.0 Weakly correlated
174 MER54B 3 ** 87.0 Weakly correlated
175 MLT1G 3 n.s 99.0 Weakly correlated
176 HERV1_I-int 3 *** 43.0 Moderately correlated
177 L1M4b 3 n.s 99.0 Weakly correlated
178 L1MDb 3 n.s 99.0 Weakly correlated
179 MER61-int 3 n.s 43.0 Moderately correlated
180 HERVE-int 3 n.s 19.6 Weakly correlated
181 L1MC5 3 n.s 99.0 Weakly correlated
182 L1MD2 3 n.s 99.0 Weakly correlated
183 L1ME2 3 n.s 99.0 Weakly correlated
184 LTR2 3 n.s 28.9 Highly correlated
185 AluSq10 2 n.s 74.0 Weakly correlated
186 AluYg6 2 * 15.2 Weakly correlated
187 HAL1ME 2 n.s 99.0 Weakly correlated
188 L1M5 2 n.s 99.0 Weakly correlated
189 LTR12E 2 * 19.6 Weakly correlated
190 LTR33 2 n.s 99.0 Weakly correlated
191 LTR41 2 n.s 99.0 Weakly correlated
192 MER83B-int 2 * 99.0 Weakly correlated
193 MLT-int 2 * 99.0 Weakly correlated
194 HERVK-int 2 n.s 28.9 Highly correlated
195 L1PBa1 2 n.s 74.0 Weakly correlated
196 L4_A_Mam 2 n.s 99.0 Weakly correlated
197 L1MA5 2 n.s 87.0 Weakly correlated
198 L1MEg 2 n.s 99.0 Weakly correlated
199 L1PA5 2 n.s 19.6 Weakly correlated
200 LTR16A 2 n.s 99.0 Weakly correlated
201 LTR87 2 * 99.0 Weakly correlated
202 MER77 2 n.s 99.0 Weakly correlated
203 MLT1E 2 n.s 99.0 Weakly correlated
204 MamGypLTR1b 2 n.s 99.0 Weakly correlated
205 THE1D 2 n.s 43.0 Moderately correlated
206 L1MB1 2 n.s 99.0 Weakly correlated
207 L1MC4a 2 n.s 99.0 Weakly correlated
208 L1ME3G 2 n.s 99.0 Weakly correlated
209 LTR1A2 2 n.s 43.0 Moderately correlated
210 LTR27D 2 ** 43.0 Moderately correlated
211 THE1C 2 n.s 43.0 Moderately correlated
212 L1MB3 2 n.s 99.0 Weakly correlated
213 LTR12 2 n.s 28.9 Highly correlated
214 LTR1A1 2 n.s 43.0 Moderately correlated
215 LTR54B 2 n.s 74.0 Weakly correlated
216 HERV16-int 2 n.s 99.0 Weakly correlated
217 L1MD1 2 n.s 99.0 Weakly correlated
218 LTR16A1 2 n.s 99.0 Weakly correlated
219 LTR79 2 n.s 99.0 Weakly correlated
220 MER52D 2 n.s 74.0 Weakly correlated
221 MER9a1 2 * 19.6 Weakly correlated
222 MLT2A2 2 n.s 74.0 Weakly correlated
223 L1MB8 2 n.s 99.0 Weakly correlated
224 L1MEh 2 n.s 99.0 Weakly correlated
225 LOR1-int 2 n.s 74.0 Weakly correlated
226 LTR78B 2 n.s 99.0 Weakly correlated
227 MER31-int 2 n.s 99.0 Weakly correlated
228 MER67C 2 n.s 99.0 Weakly correlated
229 MER89-int 2 n.s 99.0 Weakly correlated
230 FAM 2 n.s 87.0 Weakly correlated
231 L1M2a 2 n.s 87.0 Weakly correlated
232 LTR39 2 n.s 43.0 Moderately correlated
233 MLT1H1 2 n.s 99.0 Weakly correlated
234 L1M3b 1 n.s 99.0 Weakly correlated
235 L1M4a1 1 n.s 99.0 Weakly correlated
236 L1M4c 1 n.s 99.0 Weakly correlated
237 L1MA8 1 n.s 87.0 Weakly correlated
238 L1MC 1 n.s 99.0 Weakly correlated
239 LTR49 1 n.s 74.0 Weakly correlated
240 LTR53 1 n.s 99.0 Weakly correlated
241 LTR67B 1 n.s 99.0 Weakly correlated
242 MER21-int 1 n.s 99.0 Weakly correlated
243 MER34A 1 n.s 99.0 Weakly correlated
244 MER74A 1 n.s 99.0 Weakly correlated
245 MLT1A1-int 1 n.s 87.0 Weakly correlated
246 MLT1J1 1 n.s 99.0 Weakly correlated
247 MLT2F 1 n.s 99.0 Weakly correlated
248 SVA_F 1 n.s 0.0 Weakly correlated
249 HERV17-int 1 n.s 28.9 Highly correlated
250 HERV1_LTRc 1 ** 28.9 Highly correlated
251 L1MA1 1 n.s 74.0 Weakly correlated
252 L1MA5A 1 n.s 87.0 Weakly correlated
253 L1MD 1 n.s 99.0 Weakly correlated
254 L1P4a 1 n.s 74.0 Weakly correlated
255 LOR1b 1 n.s 74.0 Weakly correlated
256 LTR33A_ 1 n.s 99.0 Weakly correlated
257 MER34B-int 1 n.s 99.0 Weakly correlated
258 MER34C2 1 n.s 74.0 Weakly correlated
259 MER4A 1 n.s 74.0 Weakly correlated
260 MLT1E1 1 n.s 99.0 Weakly correlated
261 MLT1K-int 1 * 99.0 Weakly correlated
262 MSTD 1 n.s 74.0 Weakly correlated
263 MamGyp-int 1 n.s 99.0 Weakly correlated
264 MamGypLTR1a 1 n.s 99.0 Weakly correlated
265 AluYj4 1 n.s 0.0 Weakly correlated
266 HERV15-int 1 n.s 28.9 Highly correlated
267 L1ME3C 1 n.s 99.0 Weakly correlated
268 L1MEg1 1 n.s 99.0 Weakly correlated
269 L1PA8A 1 n.s 74.0 Weakly correlated
270 LTR102_Mam 1 n.s 99.0 Weakly correlated
271 LTR13A 1 n.s 28.9 Highly correlated
272 LTR84b 1 n.s 99.0 Weakly correlated
273 LTR86B1 1 * 99.0 Weakly correlated
274 LTR88b 1 n.s 99.0 Weakly correlated
275 MER52C 1 n.s 74.0 Weakly correlated
276 MER68C 1 * 99.0 Weakly correlated
277 MLT1A0-int 1 n.s 99.0 Weakly correlated
278 MSTB1-int 1 n.s 74.0 Weakly correlated
279 SVA_B 1 n.s 15.2 Weakly correlated
280 L1M4a2 1 n.s 99.0 Weakly correlated
281 L1M7 1 n.s 99.0 Weakly correlated
282 L1P4e 1 n.s 74.0 Weakly correlated
283 L1PA8 1 n.s 74.0 Weakly correlated
284 LTR10F 1 n.s 28.9 Highly correlated
285 LTR22B1 1 * 28.9 Highly correlated
286 LTR28C 1 n.s 43.0 Moderately correlated
287 LTR2B 1 n.s 19.6 Weakly correlated
288 LTR72B 1 * 74.0 Weakly correlated
289 MER4B 1 n.s 74.0 Weakly correlated
290 MER4E1 1 n.s 74.0 Weakly correlated
291 MER57-int 1 n.s 87.0 Weakly correlated
292 MER68B 1 n.s 99.0 Weakly correlated
293 MLT1A-int 1 n.s 99.0 Weakly correlated
294 MLT1L 1 n.s 99.0 Weakly correlated
295 MamGypLTR3 1 n.s 99.0 Weakly correlated
296 ERV3-16A3_LTR 1 n.s 99.0 Weakly correlated
297 HERVL18-int 1 n.s 43.0 Moderately correlated
298 L1MA6 1 n.s 87.0 Weakly correlated
299 L1MD3 1 n.s 99.0 Weakly correlated
300 L1ME3Cz 1 n.s 99.0 Weakly correlated
301 LTR18C 1 ** 43.0 Moderately correlated
302 LTR33A 1 n.s 99.0 Weakly correlated
303 LTR33B 1 n.s 99.0 Weakly correlated
304 LTR53B 1 * 99.0 Weakly correlated
305 LTR78 1 n.s 99.0 Weakly correlated
306 LTR81 1 * 99.0 Weakly correlated
307 MER4-int 1 n.s 74.0 Weakly correlated
308 MER41A 1 n.s 74.0 Weakly correlated
309 MLT1E1A-int 1 ** 99.0 Weakly correlated
310 MLT1J-int 1 n.s 99.0 Weakly correlated
311 MLT2D 1 n.s 99.0 Weakly correlated
312 MamRep605 1 n.s 99.0 Weakly correlated
313 AluYb9 1 n.s 15.2 Weakly correlated
314 ERVL-int 1 n.s 99.0 Weakly correlated
315 L1MCc 1 n.s 99.0 Weakly correlated
316 L1PA4 1 n.s 19.6 Weakly correlated
317 LTR18A 1 * 43.0 Moderately correlated
318 LTR2752 1 n.s 43.0 Moderately correlated
319 LTR86A2 1 * 99.0 Weakly correlated
320 LTR9 1 n.s 43.0 Moderately correlated
321 LTR9B 1 n.s 43.0 Moderately correlated
322 MER41B 1 n.s 74.0 Weakly correlated
323 MER41D 1 n.s 74.0 Weakly correlated
324 MER4D1 1 n.s 74.0 Weakly correlated
325 MER67A 1 n.s 99.0 Weakly correlated
326 MLT2B4 1 n.s 99.0 Weakly correlated
327 HERV9N-int 1 n.s 19.6 Weakly correlated
328 HERVL40-int 1 n.s 99.0 Weakly correlated
329 L1MA3 1 n.s 74.0 Weakly correlated
330 L1ME3B 1 n.s 99.0 Weakly correlated
331 L1ME4a 1 n.s 99.0 Weakly correlated
332 L1MEg2 1 n.s 99.0 Weakly correlated
333 L1MEi 1 n.s 99.0 Weakly correlated
334 L1PA6 1 n.s 28.9 Highly correlated
335 LTR47B2 1 * 74.0 Weakly correlated
336 MER101 1 n.s 74.0 Weakly correlated
337 MER34-int 1 n.s 99.0 Weakly correlated
338 MER41G 1 * 74.0 Weakly correlated
339 MER51-int 1 n.s 43.0 Moderately correlated
340 MER57A-int 1 n.s 43.0 Moderately correlated
341 MSTC-int 1 n.s 74.0 Weakly correlated
342 MSTD-int 1 n.s 74.0 Weakly correlated
343 MamGypLTR3a 1 n.s 99.0 Weakly correlated
344 MamGypsy2-LTR 1 n.s 99.0 Weakly correlated
345 MamRTE1 1 n.s 99.0 Weakly correlated
346 HERVK14-int 1 n.s 28.9 Highly correlated
347 L1MC2 1 n.s 99.0 Weakly correlated
348 L1P4d 1 n.s 74.0 Weakly correlated
349 LTR1 1 n.s 43.0 Moderately correlated
350 LTR15 1 n.s 28.9 Highly correlated
351 LTR32 1 n.s 43.0 Moderately correlated
352 LTR41C 1 n.s 99.0 Weakly correlated
353 LTR45C 1 n.s 99.0 Weakly correlated
354 LTR7B 1 n.s 28.9 Highly correlated
355 LTR85a 1 n.s 99.0 Weakly correlated
356 MER11D 1 n.s 19.6 Weakly correlated
357 MER34A1 1 n.s 99.0 Weakly correlated
358 MER92D 1 * 99.0 Weakly correlated
359 MER9a2 1 n.s 19.6 Weakly correlated
360 MLT1E3 1 n.s 99.0 Weakly correlated
361 MLT2B1 1 n.s 99.0 Weakly correlated
362 MSTB2-int 1 * 74.0 Weakly correlated
363 PABL_B-int 1 n.s 74.0 Weakly correlated
364 PRIMAX-int 1 ** 74.0 Weakly correlated
365 SVA_C 1 n.s 15.2 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUJB 74.0 Weakly correlated
2 ALUJO 74.0 Weakly correlated
3 ALUJR 74.0 Weakly correlated
4 ALUJR4 74.0 Weakly correlated
5 ALUSC 74.0 Weakly correlated
6 ALUSC5 74.0 Weakly correlated
7 ALUSC8 74.0 Weakly correlated
8 ALUSG 74.0 Weakly correlated
9 ALUSG4 74.0 Weakly correlated
10 ALUSG7 74.0 Weakly correlated
11 ALUSP 74.0 Weakly correlated
12 ALUSQ 74.0 Weakly correlated
13 ALUSQ2 74.0 Weakly correlated
14 ALUSX 74.0 Weakly correlated
15 ALUSX1 74.0 Weakly correlated
16 ALUSX3 74.0 Weakly correlated
17 ALUSX4 74.0 Weakly correlated
18 ALUSZ 74.0 Weakly correlated
19 ALUSZ6 74.0 Weakly correlated
20 ALUY 74.0 Weakly correlated
21 ERV3-16A3_I-INT 99.0 Weakly correlated
22 FLAM_C 74.0 Weakly correlated
23 HERV3-INT 28.9 Highly correlated
24 HERV35I-INT 43.0 Moderately correlated
25 HERVH-INT 28.9 Highly correlated
26 HERVI-INT 28.9 Highly correlated
27 HERVIP10B3-INT 28.9 Highly correlated
28 HERVIP10F-INT 28.9 Highly correlated
29 HERVIP10FH-INT 28.9 Highly correlated
30 HERVK11-INT 28.9 Highly correlated
31 HERVP71A-INT 43.0 Moderately correlated
32 HUERS-P1-INT 43.0 Moderately correlated
33 HUERS-P2-INT 43.0 Moderately correlated
34 HARLEQUIN-INT 74.0 Weakly correlated
35 L1MC4 99.0 Weakly correlated
36 L1MCA 99.0 Weakly correlated
37 LTR12C 19.6 Weakly correlated
38 LTR12D 19.6 Weakly correlated
39 LTR27E 43.0 Moderately correlated
40 MER21A 74.0 Weakly correlated
41 MER21B 99.0 Weakly correlated
42 MER41-INT 74.0 Weakly correlated
43 MER52-INT 99.0 Weakly correlated
44 MER66B 43.0 Moderately correlated
45 MLT1K 99.0 Weakly correlated
46 THE1D-INT 28.9 Highly correlated