ZRdb KZFP & Repeats
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Human_ZNF707

  • Protein
    Zinc finger protein 707
  • Length
    371
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    74.0 Mya
  • Time of Changing in binding specificity
    74.0 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MDMAQEPVTFRDVAIYFSREEWACLEPSQRALYRDVMLDNFSSVAALGFCSPRPDLVSRLEQWEEPWVEDRERPEFQAVQRGPRPGARKSADPKRPCDHPAWAHKKTHVRRERAREGSSFRKGFRLDTDDGQLPRAAPERTDAKPTAFPCQVLTQRCGRRPGRRERRKQRAVELSFICGTCGKALSCHSRLLAHQTVHTGTKAFECPECGQTFRWASNLQRHQKNHTREKPFCCEACGQAFSLKDRLAQHRKVHTEHRPYSCGDCGKAFKQKSNLLRHQLVHTGERPFYCADCGKAFRTKENLSHHQRVHSGEKPYTCAECGKSFRWPKGFSIHRRLHLTKRFYECGHCGKGFRHLGFFTRHQRTHRHGEV
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 8..79
2 C2h2 176..198
3 C2h2 204..226
4 C2h2 232..254
5 C2h2 260..282
6 C2h2 288..310
7 C2h2 316..338
8 C2h2 344..366
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 THE1B 826 **** 43.0 Weakly correlated
2 THE1B-int 821 **** 43.0 Weakly correlated
3 THE1D-int 285 **** 28.9 Weakly correlated
4 THE1D 265 **** 43.0 Weakly correlated
5 THE1A 262 **** 43.0 Weakly correlated
6 THE1A-int 260 **** 43.0 Weakly correlated
7 MSTA-int 238 **** 43.0 Weakly correlated
8 MSTA 237 **** 43.0 Weakly correlated
9 THE1C-int 217 **** 43.0 Weakly correlated
10 THE1C 211 **** 43.0 Weakly correlated
11 AluSx 188 * 74.0 Highly correlated
12 AluSx1 166 n.s 74.0 Highly correlated
13 AluJb 141 n.s 74.0 Highly correlated
14 L2a 139 n.s 99.0 Weakly correlated
15 L2c 119 n.s 99.0 Weakly correlated
16 AluSz 118 n.s 74.0 Highly correlated
17 MIRb 114 n.s 99.0 Weakly correlated
18 AluY 104 n.s 74.0 Highly correlated
19 MSTB 99 **** 43.0 Weakly correlated
20 MSTB-int 94 **** 43.0 Weakly correlated
21 L2b 84 n.s 99.0 Weakly correlated
22 MIR 80 n.s 99.0 Weakly correlated
23 AluSg 69 * 74.0 Highly correlated
24 AluSq2 69 n.s 74.0 Highly correlated
25 L1MC4 67 *** 99.0 Weakly correlated
26 L2 64 n.s 99.0 Weakly correlated
27 AluJo 60 n.s 74.0 Highly correlated
28 AluSp 60 n.s 74.0 Highly correlated
29 AluJr 59 n.s 74.0 Highly correlated
30 MIR3 57 n.s 99.0 Weakly correlated
31 MLT1A0 54 **** 99.0 Weakly correlated
32 MLT1A0-int 49 **** 99.0 Weakly correlated
33 MLT1C 43 * 94.0 Weakly correlated
34 MIRc 42 n.s 99.0 Weakly correlated
35 AluSx3 41 n.s 74.0 Highly correlated
36 MLT1B 41 *** 99.0 Weakly correlated
37 MLT1K 38 **** 99.0 Weakly correlated
38 MLT1D 37 n.s 99.0 Weakly correlated
39 MLT1A1 36 **** 87.0 Moderately correlated
40 MLT1A1-int 35 **** 87.0 Moderately correlated
41 HERVL-int 34 *** 74.0 Highly correlated
42 AluSz6 32 n.s 74.0 Highly correlated
43 AluSc 30 n.s 74.0 Highly correlated
44 MSTD 29 **** 74.0 Highly correlated
45 MSTB1 27 **** 74.0 Highly correlated
46 MSTC-int 27 **** 74.0 Highly correlated
47 AluSc8 26 n.s 74.0 Highly correlated
48 MSTC 26 **** 74.0 Highly correlated
49 MLT1D-int 25 **** 99.0 Weakly correlated
50 AluSq 24 n.s 74.0 Highly correlated
51 LTR8 24 **** 43.0 Weakly correlated
52 MER4-int 24 **** 74.0 Highly correlated
53 MLT2A2 24 **** 74.0 Highly correlated
54 MLT2A1 23 **** 74.0 Highly correlated
55 MSTB1-int 23 **** 74.0 Highly correlated
56 L1M2 22 n.s 99.0 Weakly correlated
57 L1MA9 22 n.s 99.0 Weakly correlated
58 MLT1B-int 22 **** 99.0 Weakly correlated
59 MLT1J-int 22 **** 99.0 Weakly correlated
60 MLT1J2 22 **** 99.0 Weakly correlated
61 MSTD-int 22 **** 74.0 Highly correlated
62 AluSx4 21 n.s 74.0 Highly correlated
63 MLT1I-int 21 **** 99.0 Weakly correlated
64 LTR10A 20 **** 28.9 Weakly correlated
65 HAL1 19 n.s 99.0 Weakly correlated
66 MLT1I 19 * 99.0 Weakly correlated
67 AluYj4 18 **** 0.0 Weakly correlated
68 L1PA2 18 n.s 15.2 Weakly correlated
69 MLT1C-int 18 **** 94.0 Weakly correlated
70 MLT1E2-int 18 **** 99.0 Weakly correlated
71 PRIMA4-int 18 **** 74.0 Highly correlated
72 L1MEd 17 n.s 99.0 Weakly correlated
73 L1PB1 17 n.s 74.0 Highly correlated
74 MLT1F2 17 * 99.0 Weakly correlated
75 MLT1H-int 17 **** 99.0 Weakly correlated
76 L1M4 16 n.s 99.0 Weakly correlated
77 L1MB3 16 n.s 99.0 Weakly correlated
78 L1PA3 16 n.s 19.6 Weakly correlated
79 L3 16 n.s 99.0 Weakly correlated
80 MLT1F 16 *** 99.0 Weakly correlated
81 MLT1H 16 n.s 99.0 Weakly correlated
82 FRAM 15 *** 74.0 Highly correlated
83 L1MB1 15 n.s 99.0 Weakly correlated
84 L1ME2z 15 n.s 99.0 Weakly correlated
85 MLT2C1 15 **** 99.0 Weakly correlated
86 L1ME1 14 n.s 99.0 Weakly correlated
87 MLT1E2 14 ** 99.0 Weakly correlated
88 MLT1F-int 14 **** 99.0 Weakly correlated
89 MLT1G1 14 *** 99.0 Weakly correlated
90 HERVIP10FH-int 13 **** 28.9 Weakly correlated
91 L1M5 13 n.s 99.0 Weakly correlated
92 MLT2B2 13 **** 99.0 Weakly correlated
93 FLAM_C 12 n.s 74.0 Highly correlated
94 L1MC5 12 n.s 99.0 Weakly correlated
95 L1MEc 12 n.s 99.0 Weakly correlated
96 MER31B 12 **** 99.0 Weakly correlated
97 MLT1G1-int 12 **** 99.0 Weakly correlated
98 AluSg7 11 n.s 74.0 Highly correlated
99 Harlequin-int 11 *** 74.0 Highly correlated
100 L1MA4 11 n.s 87.0 Moderately correlated
101 L1MB4 11 n.s 99.0 Weakly correlated
102 L1MB7 11 n.s 99.0 Weakly correlated
103 L1MDa 11 n.s 99.0 Weakly correlated
104 L1ME3G 11 n.s 99.0 Weakly correlated
105 LTR16A 11 * 99.0 Weakly correlated
106 MER21C 11 n.s 99.0 Weakly correlated
107 MLT1A 11 n.s 99.0 Weakly correlated
108 MLT1F2-int 11 **** 99.0 Weakly correlated
109 MLT1H2 11 ** 99.0 Weakly correlated
110 AluSg4 10 n.s 74.0 Highly correlated
111 ERVL-B4-int 10 n.s 99.0 Weakly correlated
112 ERVL-E-int 10 n.s 99.0 Weakly correlated
113 L1MA8 10 n.s 87.0 Moderately correlated
114 L1MEg 10 n.s 99.0 Weakly correlated
115 L1P1 10 n.s 19.6 Weakly correlated
116 L1PA5 10 n.s 19.6 Weakly correlated
117 LTR16C 10 n.s 99.0 Weakly correlated
118 LTR33 10 n.s 99.0 Weakly correlated
119 MLT1L 10 n.s 99.0 Weakly correlated
120 AluYm1 9 n.s 19.6 Weakly correlated
121 L1MCc 9 n.s 99.0 Weakly correlated
122 L1MD 9 n.s 99.0 Weakly correlated
123 L1ME4b 9 n.s 99.0 Weakly correlated
124 LTR56 9 **** 74.0 Highly correlated
125 MER50 9 n.s 43.0 Weakly correlated
126 MER52A 9 n.s 74.0 Highly correlated
127 MLT1J 9 n.s 99.0 Weakly correlated
128 MLT1J2-int 9 **** 99.0 Weakly correlated
129 MLT1M 9 **** 99.0 Weakly correlated
130 AluYa5 8 n.s 15.2 Weakly correlated
131 FLAM_A 8 n.s 74.0 Highly correlated
132 HERV16-int 8 * 99.0 Weakly correlated
133 HERV17-int 8 * 28.9 Weakly correlated
134 L1M1 8 n.s 74.0 Highly correlated
135 L1MB2 8 n.s 99.0 Weakly correlated
136 L1P3 8 n.s 74.0 Highly correlated
137 L1PA4 8 n.s 19.6 Weakly correlated
138 LTR67B 8 ** 99.0 Weakly correlated
139 MLT1G3 8 * 99.0 Weakly correlated
140 MLT1H1 8 n.s 99.0 Weakly correlated
141 MLT1H1-int 8 **** 99.0 Weakly correlated
142 MSTB2 8 ** 74.0 Highly correlated
143 MSTB2-int 8 **** 74.0 Highly correlated
144 AluSc5 7 n.s 74.0 Highly correlated
145 ERV3-16A3_I-int 7 n.s 99.0 Weakly correlated
146 L1MA3 7 n.s 74.0 Highly correlated
147 L1MC5a 7 n.s 99.0 Weakly correlated
148 L1MD2 7 n.s 99.0 Weakly correlated
149 L1P4 7 n.s 74.0 Highly correlated
150 LTR12C 7 n.s 19.6 Weakly correlated
151 MER21-int 7 ** 99.0 Weakly correlated
152 MER21B 7 n.s 99.0 Weakly correlated
153 MER61-int 7 n.s 43.0 Weakly correlated
154 MER66B 7 ** 43.0 Weakly correlated
155 MLT2B3 7 n.s 99.0 Weakly correlated
156 MLT2F 7 * 99.0 Weakly correlated
157 MamRTE1 7 n.s 99.0 Weakly correlated
158 THE1-int 7 **** 43.0 Weakly correlated
159 Alu 6 *** 74.0 Highly correlated
160 AluYc 6 n.s 74.0 Highly correlated
161 HERVE-int 6 * 19.6 Weakly correlated
162 L1M3 6 n.s 99.0 Weakly correlated
163 L1M4b 6 n.s 99.0 Weakly correlated
164 L1MB8 6 n.s 99.0 Weakly correlated
165 L1ME4a 6 n.s 99.0 Weakly correlated
166 L1PA7 6 n.s 74.0 Highly correlated
167 L2-3_Crp 6 ** 431.0 Weakly correlated
168 LTR10F 6 **** 28.9 Weakly correlated
169 LTR13 6 ** 19.6 Weakly correlated
170 LTR16A1 6 n.s 99.0 Weakly correlated
171 LTR2 6 ** 28.9 Weakly correlated
172 LTR7C 6 **** 28.9 Weakly correlated
173 MER4D 6 * 74.0 Highly correlated
174 MLT1A-int 6 **** 99.0 Weakly correlated
175 MLT1N2 6 n.s 99.0 Weakly correlated
176 MLT2B4 6 n.s 99.0 Weakly correlated
177 AluJr4 5 n.s 74.0 Highly correlated
178 HAL1ME 5 n.s 99.0 Weakly correlated
179 L1MA10 5 n.s 99.0 Weakly correlated
180 L1MA7 5 n.s 87.0 Moderately correlated
181 L1MC3 5 n.s 99.0 Weakly correlated
182 L1MD1 5 n.s 99.0 Weakly correlated
183 L1ME3A 5 n.s 99.0 Weakly correlated
184 L1PA8 5 n.s 74.0 Highly correlated
185 L1PREC2 5 n.s 43.0 Weakly correlated
186 L4_A_Mam 5 n.s 99.0 Weakly correlated
187 LTR41 5 * 99.0 Weakly correlated
188 LTR41C 5 *** 99.0 Weakly correlated
189 MER21A 5 n.s 74.0 Highly correlated
190 MER4B-int 5 n.s 99.0 Weakly correlated
191 MLT1H2-int 5 *** 99.0 Weakly correlated
192 MLT1K-int 5 **** 99.0 Weakly correlated
193 AluSq10 4 n.s 74.0 Highly correlated
194 AluYk3 4 * 19.6 Weakly correlated
195 FAM 4 n.s 87.0 Moderately correlated
196 HAL1b 4 n.s 99.0 Weakly correlated
197 HERVH48-int 4 ** 28.9 Weakly correlated
198 HERVS71-int 4 n.s 28.9 Weakly correlated
199 L1M4c 4 n.s 99.0 Weakly correlated
200 L1MA1 4 n.s 74.0 Highly correlated
201 L1MC1 4 n.s 99.0 Weakly correlated
202 L1MC2 4 n.s 99.0 Weakly correlated
203 L1ME2 4 n.s 99.0 Weakly correlated
204 L1ME3Cz 4 n.s 99.0 Weakly correlated
205 L1ME4c 4 n.s 99.0 Weakly correlated
206 L1ME5 4 n.s 99.0 Weakly correlated
207 L1MEi 4 n.s 99.0 Weakly correlated
208 L1PA13 4 n.s 74.0 Highly correlated
209 L1PA15 4 n.s 74.0 Highly correlated
210 L1PA16 4 n.s 74.0 Highly correlated
211 L1PA17 4 n.s 74.0 Highly correlated
212 L1PA6 4 n.s 28.9 Weakly correlated
213 L3b 4 n.s 99.0 Weakly correlated
214 LTR8A 4 n.s 43.0 Weakly correlated
215 MER101 4 *** 74.0 Highly correlated
216 MER31A 4 n.s 87.0 Moderately correlated
217 MER52D 4 n.s 74.0 Highly correlated
218 MER67D 4 * 99.0 Weakly correlated
219 MER68 4 n.s 99.0 Weakly correlated
220 MLT1-int 4 **** 99.0 Weakly correlated
221 MLT1G 4 n.s 99.0 Weakly correlated
222 MLT1G-int 4 **** 99.0 Weakly correlated
223 MLT1L-int 4 **** 99.0 Weakly correlated
224 MLT1N2-int 4 **** 99.0 Weakly correlated
225 MLT1O 4 n.s 99.0 Weakly correlated
226 MLT2B1 4 n.s 99.0 Weakly correlated
227 MST-int 4 **** 74.0 Highly correlated
228 MSTA1 4 ** 74.0 Highly correlated
229 SVA_A 4 n.s 19.6 Weakly correlated
230 AluYf1 3 n.s 19.6 Weakly correlated
231 AluYh9 3 **** 15.2 Weakly correlated
232 AluYk11 3 ** 15.2 Weakly correlated
233 HERVK-int 3 n.s 28.9 Weakly correlated
234 HUERS-P2-int 3 * 43.0 Weakly correlated
235 L1M6 3 n.s 99.0 Weakly correlated
236 L1MA2 3 n.s 74.0 Highly correlated
237 L1MA4A 3 n.s 87.0 Moderately correlated
238 L1MA5A 3 n.s 87.0 Moderately correlated
239 L1MA6 3 n.s 87.0 Moderately correlated
240 L1MC4a 3 n.s 99.0 Weakly correlated
241 L1MCb 3 n.s 99.0 Weakly correlated
242 L1MD3 3 n.s 99.0 Weakly correlated
243 L1ME3B 3 n.s 99.0 Weakly correlated
244 L1MEf 3 n.s 99.0 Weakly correlated
245 L1PA10 3 n.s 74.0 Highly correlated
246 L1PBa 3 n.s 74.0 Highly correlated
247 LTR10B 3 **** 28.9 Weakly correlated
248 LTR16 3 n.s 99.0 Weakly correlated
249 LTR19A 3 ** 43.0 Weakly correlated
250 LTR26 3 * 74.0 Highly correlated
251 LTR33A_ 3 n.s 99.0 Weakly correlated
252 LTR41B 3 * 99.0 Weakly correlated
253 LTR5B 3 n.s 28.9 Weakly correlated
254 LTR7B 3 n.s 28.9 Weakly correlated
255 MER39B 3 n.s 74.0 Highly correlated
256 MER41-int 3 n.s 74.0 Highly correlated
257 MER4A1 3 n.s 74.0 Highly correlated
258 MER4D0 3 ** 74.0 Highly correlated
259 MER54B 3 * 87.0 Moderately correlated
260 MER61C 3 ** 43.0 Weakly correlated
261 MER66-int 3 n.s 43.0 Weakly correlated
262 MER68-int 3 ** 99.0 Weakly correlated
263 MER76 3 * 99.0 Weakly correlated
264 MER89 3 n.s 99.0 Weakly correlated
265 MER92B 3 * 99.0 Weakly correlated
266 MIR1_Amn 3 n.s 319.0 Weakly correlated
267 MLT1E1A-int 3 **** 99.0 Weakly correlated
268 MLT1F1 3 n.s 99.0 Weakly correlated
269 MSTA1-int 3 **** 74.0 Highly correlated
270 SVA_C 3 n.s 15.2 Weakly correlated
271 AluYa8 2 ** 15.2 Weakly correlated
272 AluYe5 2 n.s 74.0 Highly correlated
273 CR1-3_Croc 2 n.s 319.0 Weakly correlated
274 HERVH-int 2 n.s 28.9 Weakly correlated
275 HERVL18-int 2 n.s 43.0 Weakly correlated
276 L1M2c 2 n.s 87.0 Moderately correlated
277 L1M3f 2 n.s 87.0 Moderately correlated
278 L1MA5 2 n.s 87.0 Moderately correlated
279 L1MB5 2 n.s 99.0 Weakly correlated
280 L1MCa 2 n.s 99.0 Weakly correlated
281 L1ME3 2 n.s 99.0 Weakly correlated
282 L1MEg2 2 n.s 99.0 Weakly correlated
283 L1P2 2 n.s 28.9 Weakly correlated
284 L1PA14 2 n.s 74.0 Highly correlated
285 L1PB3 2 n.s 74.0 Highly correlated
286 L4_B_Mam 2 n.s 99.0 Weakly correlated
287 LTR16D 2 n.s 99.0 Weakly correlated
288 LTR16E2 2 n.s 99.0 Weakly correlated
289 LTR18A 2 ** 43.0 Weakly correlated
290 LTR26E 2 ** 74.0 Highly correlated
291 LTR37A 2 n.s 99.0 Weakly correlated
292 LTR48 2 n.s 74.0 Highly correlated
293 LTR50 2 n.s 99.0 Weakly correlated
294 LTR53-int 2 n.s 99.0 Weakly correlated
295 LTR71B 2 * 43.0 Weakly correlated
296 LTR81B 2 n.s 99.0 Weakly correlated
297 LTR88a 2 * 99.0 Weakly correlated
298 LTR8B 2 n.s 43.0 Weakly correlated
299 MER34A 2 n.s 99.0 Weakly correlated
300 MER4A 2 n.s 74.0 Highly correlated
301 MER4B 2 n.s 74.0 Highly correlated
302 MER50-int 2 n.s 43.0 Weakly correlated
303 MER57-int 2 n.s 87.0 Moderately correlated
304 MER57A-int 2 n.s 43.0 Weakly correlated
305 MER65-int 2 n.s 87.0 Moderately correlated
306 MER67C 2 n.s 99.0 Weakly correlated
307 MER74A 2 n.s 99.0 Weakly correlated
308 MER77B 2 n.s 99.0 Weakly correlated
309 MLT2C2 2 n.s 99.0 Weakly correlated
310 MLT2D 2 n.s 99.0 Weakly correlated
311 MamGypLTR1d 2 * 99.0 Weakly correlated
312 MamGypLTR3 2 * 99.0 Weakly correlated
313 MamRep605 2 n.s 99.0 Weakly correlated
314 MamSINE1 2 n.s 99.0 Weakly correlated
315 PrimLTR79 2 *** 74.0 Highly correlated
316 SVA_B 2 n.s 15.2 Weakly correlated
317 AluSq4 1 n.s 74.0 Highly correlated
318 AluYb8 1 n.s 15.2 Weakly correlated
319 AluYc3 1 n.s 74.0 Highly correlated
320 AluYg6 1 n.s 15.2 Weakly correlated
321 AluYh3 1 n.s 15.2 Weakly correlated
322 AluYh3a3 1 n.s 15.2 Weakly correlated
323 AluYk2 1 n.s 19.6 Weakly correlated
324 ERV3-16A3_LTR 1 n.s 99.0 Weakly correlated
325 HAL1M8 1 n.s 99.0 Weakly correlated
326 HERV15-int 1 n.s 28.9 Weakly correlated
327 HERV9-int 1 n.s 28.9 Weakly correlated
328 HERV9N-int 1 n.s 19.6 Weakly correlated
329 HERVIP10F-int 1 n.s 28.9 Weakly correlated
330 HERVK11-int 1 n.s 28.9 Weakly correlated
331 HERVP71A-int 1 n.s 43.0 Weakly correlated
332 L1HS 1 n.s 8.6 Weakly correlated
333 L1M 1 n.s 74.0 Highly correlated
334 L1M2a 1 n.s 87.0 Moderately correlated
335 L1M2a1 1 n.s 79.0 Moderately correlated
336 L1M3c 1 n.s 99.0 Weakly correlated
337 L1M3de 1 n.s 99.0 Weakly correlated
338 L1M4a2 1 n.s 99.0 Weakly correlated
339 L1M7 1 n.s 99.0 Weakly correlated
340 L1MC 1 n.s 99.0 Weakly correlated
341 L1ME3F 1 n.s 99.0 Weakly correlated
342 L1MEa 1 n.s 99.0 Weakly correlated
343 L1MEh 1 n.s 99.0 Weakly correlated
344 L1MEj 1 n.s 99.0 Weakly correlated
345 L1PA11 1 n.s 74.0 Highly correlated
346 L1PB 1 n.s 74.0 Highly correlated
347 L1PB2 1 n.s 74.0 Highly correlated
348 L1PB4 1 n.s 99.0 Weakly correlated
349 L2-1_AMi 1 n.s 319.0 Weakly correlated
350 LFSINE_Vert 1 n.s 319.0 Weakly correlated
351 LOR1-int 1 n.s 74.0 Highly correlated
352 LTR101_Mam 1 n.s 99.0 Weakly correlated
353 LTR103b_Mam 1 n.s 99.0 Weakly correlated
354 LTR15 1 n.s 28.9 Weakly correlated
355 LTR16B 1 n.s 99.0 Weakly correlated
356 LTR16D1 1 * 99.0 Weakly correlated
357 LTR16E1 1 n.s 99.0 Weakly correlated
358 LTR18B 1 n.s 43.0 Weakly correlated
359 LTR1A2 1 n.s 43.0 Weakly correlated
360 LTR1B 1 n.s 43.0 Weakly correlated
361 LTR1E 1 n.s 43.0 Weakly correlated
362 LTR1F1 1 n.s 43.0 Weakly correlated
363 LTR22C0 1 * 28.9 Weakly correlated
364 LTR25-int 1 n.s 43.0 Weakly correlated
365 LTR27B 1 n.s 43.0 Weakly correlated
366 LTR27C 1 n.s 43.0 Weakly correlated
367 LTR27D 1 n.s 43.0 Weakly correlated
368 LTR28C 1 n.s 43.0 Weakly correlated
369 LTR33A 1 n.s 99.0 Weakly correlated
370 LTR33B 1 n.s 99.0 Weakly correlated
371 LTR35 1 * 43.0 Weakly correlated
372 LTR40c 1 n.s 99.0 Weakly correlated
373 LTR44 1 n.s 74.0 Highly correlated
374 LTR47A2 1 n.s 74.0 Highly correlated
375 LTR53 1 n.s 99.0 Weakly correlated
376 LTR53B 1 n.s 99.0 Weakly correlated
377 LTR54B 1 n.s 74.0 Highly correlated
378 LTR5A 1 n.s 19.6 Weakly correlated
379 LTR6A 1 n.s 28.9 Weakly correlated
380 LTR72 1 * 74.0 Highly correlated
381 LTR78 1 n.s 99.0 Weakly correlated
382 LTR78B 1 n.s 99.0 Weakly correlated
383 LTR81 1 * 99.0 Weakly correlated
384 LTR86A1 1 n.s 99.0 Weakly correlated
385 LTR88b 1 n.s 99.0 Weakly correlated
386 LTR90A 1 * 99.0 Weakly correlated
387 LTR9D 1 n.s 43.0 Weakly correlated
388 MER101-int 1 n.s 74.0 Highly correlated
389 MER110 1 n.s 99.0 Weakly correlated
390 MER11A 1 n.s 28.9 Weakly correlated
391 MER11B 1 n.s 19.6 Weakly correlated
392 MER34A1 1 n.s 99.0 Weakly correlated
393 MER34B-int 1 n.s 99.0 Weakly correlated
394 MER41E 1 n.s 74.0 Highly correlated
395 MER41G 1 * 74.0 Highly correlated
396 MER4C 1 n.s 74.0 Highly correlated
397 MER4D1 1 n.s 74.0 Highly correlated
398 MER51-int 1 n.s 43.0 Weakly correlated
399 MER51A 1 n.s 43.0 Weakly correlated
400 MER52C 1 n.s 74.0 Highly correlated
401 MER54A 1 n.s 87.0 Moderately correlated
402 MER57A1 1 n.s 43.0 Weakly correlated
403 MER57B2 1 n.s 43.0 Weakly correlated
404 MER57C2 1 n.s 87.0 Moderately correlated
405 MER57D 1 n.s 87.0 Moderately correlated
406 MER57F 1 n.s 74.0 Highly correlated
407 MER61B 1 n.s 43.0 Weakly correlated
408 MER61D 1 n.s 43.0 Weakly correlated
409 MER61F 1 * 43.0 Weakly correlated
410 MER65A 1 n.s 74.0 Highly correlated
411 MER90 1 n.s 99.0 Weakly correlated
412 MLT-int 1 n.s 99.0 Weakly correlated
413 MLT1G3-int 1 n.s 99.0 Weakly correlated
414 MLT1J1 1 n.s 99.0 Weakly correlated
415 MLT1J1-int 1 n.s 99.0 Weakly correlated
416 MLT2E 1 n.s 99.0 Weakly correlated
417 MamGypLTR2b 1 n.s 99.0 Weakly correlated
418 MamGypLTR3a 1 n.s 99.0 Weakly correlated
419 MamGypsy2-LTR 1 n.s 99.0 Weakly correlated
420 Plat_L3 1 n.s 99.0 Weakly correlated
421 SVA_E 1 n.s 0.0 Weakly correlated
422 UCON86 1 ** 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 THE1B-int 364 **** 43.0 Weakly correlated
2 THE1D-int 148 **** 28.9 Weakly correlated
3 MSTA-int 128 **** 43.0 Weakly correlated
4 THE1A-int 118 **** 43.0 Weakly correlated
5 THE1C-int 112 **** 43.0 Weakly correlated
6 MSTB-int 44 **** 43.0 Weakly correlated
7 L2a 25 n.s 99.0 Weakly correlated
8 AluSz 23 n.s 74.0 Highly correlated
9 AluSx1 22 n.s 74.0 Highly correlated
10 HERVL-int 18 n.s 74.0 Highly correlated
11 MLT1A0-int 18 **** 99.0 Weakly correlated
12 MLT1A1-int 17 **** 87.0 Moderately correlated
13 AluSq2 16 n.s 74.0 Highly correlated
14 L2c 15 n.s 99.0 Weakly correlated
15 AluSx 15 n.s 74.0 Highly correlated
16 AluJb 13 n.s 74.0 Highly correlated
17 MSTC-int 13 **** 74.0 Highly correlated
18 MSTD-int 12 **** 74.0 Highly correlated
19 AluSp 12 n.s 74.0 Highly correlated
20 L1MA9 11 n.s 99.0 Weakly correlated
21 L2 11 n.s 99.0 Weakly correlated
22 MLT1C 11 n.s 94.0 Weakly correlated
23 MSTB1-int 11 **** 74.0 Highly correlated
24 AluY 11 n.s 74.0 Highly correlated
25 MIR3 11 n.s 99.0 Weakly correlated
26 MIRb 11 n.s 99.0 Weakly correlated
27 Harlequin-int 11 *** 74.0 Highly correlated
28 MLT1I-int 10 **** 99.0 Weakly correlated
29 AluSg 10 n.s 74.0 Highly correlated
30 L1PB1 10 n.s 74.0 Highly correlated
31 L1M2 10 n.s 99.0 Weakly correlated
32 MLT1D-int 10 **** 99.0 Weakly correlated
33 L2b 10 n.s 99.0 Weakly correlated
34 MLT1C-int 9 **** 94.0 Weakly correlated
35 MLT1J-int 9 **** 99.0 Weakly correlated
36 MLT1B-int 8 **** 99.0 Weakly correlated
37 MLT1H-int 8 **** 99.0 Weakly correlated
38 L1ME1 8 n.s 99.0 Weakly correlated
39 THE1B 8 n.s 43.0 Weakly correlated
40 MSTB 7 n.s 43.0 Weakly correlated
41 AluJr 6 n.s 74.0 Highly correlated
42 MLT1F2 6 n.s 99.0 Weakly correlated
43 MLT1K 6 n.s 99.0 Weakly correlated
44 AluSc 6 n.s 74.0 Highly correlated
45 L1MA4 6 n.s 87.0 Moderately correlated
46 MIR 6 n.s 99.0 Weakly correlated
47 MIRc 6 n.s 99.0 Weakly correlated
48 MLT1E2-int 6 **** 99.0 Weakly correlated
49 AluJo 6 n.s 74.0 Highly correlated
50 AluSq 6 n.s 74.0 Highly correlated
51 MLT1F2-int 6 **** 99.0 Weakly correlated
52 L1MB1 6 n.s 99.0 Weakly correlated
53 MER52A 6 n.s 74.0 Highly correlated
54 LTR67B 5 n.s 99.0 Weakly correlated
55 L1MA8 5 n.s 87.0 Moderately correlated
56 MER31B 5 * 99.0 Weakly correlated
57 AluSx4 5 n.s 74.0 Highly correlated
58 L1MDa 5 n.s 99.0 Weakly correlated
59 MSTA 5 n.s 43.0 Weakly correlated
60 AluSc8 5 n.s 74.0 Highly correlated
61 HERVE-int 5 n.s 19.6 Weakly correlated
62 LTR56 5 ** 74.0 Highly correlated
63 MLT1A0 5 n.s 99.0 Weakly correlated
64 L1M1 4 n.s 74.0 Highly correlated
65 MLT1B 4 n.s 99.0 Weakly correlated
66 L1MA7 4 n.s 87.0 Moderately correlated
67 L1MB2 4 n.s 99.0 Weakly correlated
68 MLT1F-int 4 ** 99.0 Weakly correlated
69 AluSz6 4 n.s 74.0 Highly correlated
70 HAL1 4 n.s 99.0 Weakly correlated
71 MLT1A-int 4 ** 99.0 Weakly correlated
72 L1M5 4 n.s 99.0 Weakly correlated
73 L1MC4 4 n.s 99.0 Weakly correlated
74 MSTB2-int 4 **** 74.0 Highly correlated
75 MLT1H1-int 4 ** 99.0 Weakly correlated
76 MER52D 3 n.s 74.0 Highly correlated
77 MER66B 3 n.s 43.0 Weakly correlated
78 L1MC3 3 n.s 99.0 Weakly correlated
79 L1ME4c 3 n.s 99.0 Weakly correlated
80 L1PA17 3 n.s 74.0 Highly correlated
81 L1PA3 3 n.s 19.6 Weakly correlated
82 MER31A 3 n.s 87.0 Moderately correlated
83 ERVL-E-int 3 n.s 99.0 Weakly correlated
84 HERV16-int 3 n.s 99.0 Weakly correlated
85 LTR33 3 n.s 99.0 Weakly correlated
86 MER21B 3 n.s 99.0 Weakly correlated
87 THE1C 3 n.s 43.0 Weakly correlated
88 L1MA10 3 n.s 99.0 Weakly correlated
89 LTR2 3 n.s 28.9 Weakly correlated
90 MER21-int 3 n.s 99.0 Weakly correlated
91 L1PA8 3 n.s 74.0 Highly correlated
92 THE1-int 3 ** 43.0 Weakly correlated
93 ERVL-B4-int 3 n.s 99.0 Weakly correlated
94 LTR16C 3 n.s 99.0 Weakly correlated
95 MLT1G1-int 3 ** 99.0 Weakly correlated
96 HERVS71-int 3 n.s 28.9 Weakly correlated
97 L1M4c 3 n.s 99.0 Weakly correlated
98 L1MA4A 3 n.s 87.0 Moderately correlated
99 L1MB3 3 n.s 99.0 Weakly correlated
100 L1MC1 3 n.s 99.0 Weakly correlated
101 LTR16A1 3 n.s 99.0 Weakly correlated
102 AluSc5 2 n.s 74.0 Highly correlated
103 L1MA1 2 n.s 74.0 Highly correlated
104 L1MC5 2 n.s 99.0 Weakly correlated
105 L1MCc 2 n.s 99.0 Weakly correlated
106 L1PA6 2 n.s 28.9 Weakly correlated
107 L3 2 n.s 99.0 Weakly correlated
108 LTR12C 2 n.s 19.6 Weakly correlated
109 LTR8A 2 n.s 43.0 Weakly correlated
110 MLT1-int 2 ** 99.0 Weakly correlated
111 MLT1H2-int 2 * 99.0 Weakly correlated
112 MLT1J2 2 n.s 99.0 Weakly correlated
113 L1MEd 2 n.s 99.0 Weakly correlated
114 MLT1D 2 n.s 99.0 Weakly correlated
115 THE1D 2 n.s 43.0 Weakly correlated
116 L1M4 2 n.s 99.0 Weakly correlated
117 L1ME3G 2 n.s 99.0 Weakly correlated
118 L1MEg 2 n.s 99.0 Weakly correlated
119 L1MEi 2 n.s 99.0 Weakly correlated
120 L1PA13 2 n.s 74.0 Highly correlated
121 MER21C 2 n.s 99.0 Weakly correlated
122 MER68-int 2 * 99.0 Weakly correlated
123 MLT2B2 2 n.s 99.0 Weakly correlated
124 L1MA5 2 n.s 87.0 Moderately correlated
125 L1MC4a 2 n.s 99.0 Weakly correlated
126 L1ME3 2 n.s 99.0 Weakly correlated
127 MLT1A 2 n.s 99.0 Weakly correlated
128 MLT1G-int 2 ** 99.0 Weakly correlated
129 MLT1J2-int 2 n.s 99.0 Weakly correlated
130 HERVK-int 2 n.s 28.9 Weakly correlated
131 L1MA5A 2 n.s 87.0 Moderately correlated
132 L1MA6 2 n.s 87.0 Moderately correlated
133 L1MD1 2 n.s 99.0 Weakly correlated
134 MER61-int 2 n.s 43.0 Weakly correlated
135 MST-int 2 ** 74.0 Highly correlated
136 FRAM 2 n.s 74.0 Highly correlated
137 L1MD 2 n.s 99.0 Weakly correlated
138 MLT1K-int 2 ** 99.0 Weakly correlated
139 MamRTE1 2 n.s 99.0 Weakly correlated
140 L1MEf 2 n.s 99.0 Weakly correlated
141 L1PA2 2 n.s 15.2 Weakly correlated
142 L1PB3 2 n.s 74.0 Highly correlated
143 MLT1F 2 n.s 99.0 Weakly correlated
144 MLT1J 2 n.s 99.0 Weakly correlated
145 MSTD 2 n.s 74.0 Highly correlated
146 AluSx3 2 n.s 74.0 Highly correlated
147 HAL1ME 2 n.s 99.0 Weakly correlated
148 L1PA7 2 n.s 74.0 Highly correlated
149 L1PBa 2 n.s 74.0 Highly correlated
150 LTR8 2 n.s 43.0 Weakly correlated
151 MER4B 2 n.s 74.0 Highly correlated
152 L1M2a1 1 n.s 79.0 Moderately correlated
153 LTR33B 1 n.s 99.0 Weakly correlated
154 MER34A 1 n.s 99.0 Weakly correlated
155 MER67C 1 n.s 99.0 Weakly correlated
156 MER90 1 n.s 99.0 Weakly correlated
157 MLT1A1 1 n.s 87.0 Moderately correlated
158 MLT1G3-int 1 n.s 99.0 Weakly correlated
159 MLT1H 1 n.s 99.0 Weakly correlated
160 MLT1O 1 n.s 99.0 Weakly correlated
161 AluYa5 1 n.s 15.2 Weakly correlated
162 ERV3-16A3_I-int 1 n.s 99.0 Weakly correlated
163 FLAM_A 1 n.s 74.0 Highly correlated
164 HERVL18-int 1 n.s 43.0 Weakly correlated
165 L1MA2 1 n.s 74.0 Highly correlated
166 L1MB8 1 n.s 99.0 Weakly correlated
167 L1ME3B 1 n.s 99.0 Weakly correlated
168 L1PA14 1 n.s 74.0 Highly correlated
169 L1PA16 1 n.s 74.0 Highly correlated
170 MER34A1 1 n.s 99.0 Weakly correlated
171 MLT1E2 1 n.s 99.0 Weakly correlated
172 MLT1N2-int 1 ** 99.0 Weakly correlated
173 HERV9N-int 1 n.s 19.6 Weakly correlated
174 HUERS-P2-int 1 n.s 43.0 Weakly correlated
175 L1MD2 1 n.s 99.0 Weakly correlated
176 LTR16E2 1 n.s 99.0 Weakly correlated
177 LTR1A2 1 n.s 43.0 Weakly correlated
178 LTR1B 1 n.s 43.0 Weakly correlated
179 LTR27C 1 n.s 43.0 Weakly correlated
180 LTR35 1 * 43.0 Weakly correlated
181 MER34B-int 1 n.s 99.0 Weakly correlated
182 MER50-int 1 n.s 43.0 Weakly correlated
183 MER54B 1 n.s 87.0 Moderately correlated
184 MER57C2 1 n.s 87.0 Moderately correlated
185 MLT-int 1 n.s 99.0 Weakly correlated
186 Alu 1 n.s 74.0 Highly correlated
187 AluJr4 1 n.s 74.0 Highly correlated
188 AluSq10 1 n.s 74.0 Highly correlated
189 AluYk3 1 n.s 19.6 Weakly correlated
190 L1MB4 1 n.s 99.0 Weakly correlated
191 L1MCa 1 n.s 99.0 Weakly correlated
192 L1PA11 1 n.s 74.0 Highly correlated
193 LTR78B 1 n.s 99.0 Weakly correlated
194 MER11B 1 n.s 19.6 Weakly correlated
195 MER89 1 n.s 99.0 Weakly correlated
196 MLT1E1A-int 1 * 99.0 Weakly correlated
197 MLT1J1-int 1 n.s 99.0 Weakly correlated
198 MLT2C2 1 n.s 99.0 Weakly correlated
199 SVA_B 1 n.s 15.2 Weakly correlated
200 FAM 1 n.s 87.0 Moderately correlated
201 HERVK11-int 1 n.s 28.9 Weakly correlated
202 L1M3de 1 n.s 99.0 Weakly correlated
203 L1ME5 1 n.s 99.0 Weakly correlated
204 L1MEc 1 n.s 99.0 Weakly correlated
205 L1PA15 1 n.s 74.0 Highly correlated
206 L1PA4 1 n.s 19.6 Weakly correlated
207 LTR101_Mam 1 n.s 99.0 Weakly correlated
208 LTR1E 1 n.s 43.0 Weakly correlated
209 LTR41C 1 n.s 99.0 Weakly correlated
210 MLT1H1 1 n.s 99.0 Weakly correlated
211 MLT2B4 1 n.s 99.0 Weakly correlated
212 MSTA1-int 1 ** 74.0 Highly correlated
213 HERV15-int 1 n.s 28.9 Weakly correlated
214 L1M3f 1 n.s 87.0 Moderately correlated
215 L1MEj 1 n.s 99.0 Weakly correlated
216 L1PREC2 1 n.s 43.0 Weakly correlated
217 LTR10B 1 * 28.9 Weakly correlated
218 LTR18B 1 n.s 43.0 Weakly correlated
219 LTR78 1 n.s 99.0 Weakly correlated
220 MER74A 1 n.s 99.0 Weakly correlated
221 MER92B 1 n.s 99.0 Weakly correlated
222 MLT2B1 1 n.s 99.0 Weakly correlated
223 MamRep605 1 n.s 99.0 Weakly correlated
224 L1M2c 1 n.s 87.0 Moderately correlated
225 L1MC2 1 n.s 99.0 Weakly correlated
226 L1ME3A 1 n.s 99.0 Weakly correlated
227 L1ME3F 1 n.s 99.0 Weakly correlated
228 L1MEg2 1 n.s 99.0 Weakly correlated
229 LTR16D1 1 * 99.0 Weakly correlated
230 LTR16E1 1 n.s 99.0 Weakly correlated
231 MER41-int 1 n.s 74.0 Highly correlated
232 MER4D 1 n.s 74.0 Highly correlated
233 MER4D0 1 n.s 74.0 Highly correlated
234 MER51A 1 n.s 43.0 Weakly correlated
235 MER52C 1 n.s 74.0 Highly correlated
236 MER61C 1 n.s 43.0 Weakly correlated
237 AluSg7 1 n.s 74.0 Highly correlated
238 L1M2a 1 n.s 87.0 Moderately correlated
239 L1M4b 1 n.s 99.0 Weakly correlated
240 L1MA3 1 n.s 74.0 Highly correlated
241 L1PA10 1 n.s 74.0 Highly correlated
242 L4_B_Mam 1 n.s 99.0 Weakly correlated
243 LTR53B 1 n.s 99.0 Weakly correlated
244 LTR81B 1 n.s 99.0 Weakly correlated
245 MER4-int 1 n.s 74.0 Highly correlated
246 MER4B-int 1 n.s 99.0 Weakly correlated
247 MER77B 1 n.s 99.0 Weakly correlated
248 MLT1H2 1 n.s 99.0 Weakly correlated
249 MLT1L-int 1 ** 99.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUSQ 74.0 Highly correlated
2 ALUSX 74.0 Highly correlated
3 ALUY 74.0 Highly correlated
4 HARLEQUIN-INT 74.0 Highly correlated
5 L1MA9 99.0 Weakly correlated
6 L1MB1 99.0 Weakly correlated
7 MLT1F2 99.0 Weakly correlated