ZRdb KZFP & Repeats
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Human_ZNF169

  • Protein
    Zinc finger protein 169
  • Length
    603
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    94.0 Mya
  • Time of Changing in binding specificity
    94.0 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MSPGLLTTRKEALMAFRDVAVAFTQKEWKLLSSAQRTLYREVMLENYSHLVSLGIAFSKPKLIEQLEQGDEPWREENEHLLDLCPEPRTEFQPSFPHLVAFSSSQLLRQYALSGHPTQIFPSSSAGGDFQLEAPRCSSEKGESGETEGPDSSLRKRPSRISRTFFSPHQGDPVEWVEGNREGGTDLRLAQRMSLGGSDTMLKGADTSESGAVIRGNYRLGLSKKSSLFSHQKHHVCPECGRGFCQRSDLIKHQRTHTGEKPYLCPECGRRFSQKASLSIHQRKHSGEKPYVCRECGRHFRYTSSLTNHKRIHSGERPFVCQECGRGFRQKIALLLHQRTHLEEKPFVCPECGRGFCQKASLLQHQSSHTGERPFLCLECGRSFRQQSLLLSHQVTHSGEKPYVCAECGHSFRQKVTLIRHQRTHTGEKPYLCPQCGRGFSQKVTLIGHQRTHTGEKPYLCPDCGRGFGQKVTLIRHQRTHTGEKPYLCPKCGRAFGFKSLLTRHQRTHSEEELYVDRVCGQGLGQKSHLISDQRTHSGEKPCICDECGRGFGFKSALIRHQRTHSGEKPYVCRECGRGFSQKSHLHRHRRTKSGHQLLPQEVF
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 14..85
2 C2h2 234..256
3 C2h2 262..284
4 C2h2 290..312
5 C2h2 318..340
6 C2h2 346..368
7 C2h2 374..396
8 C2h2 402..424
9 C2h2 430..452
10 C2h2 458..480
11 C2h2 486..508
12 dec2h2 514..536
13 C2h2 542..564
14 dec2h2 570..592
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific
4 Molecular Function metal ion binding
5 Molecular Function RNA polymerase II transcription regulatory region sequence-specific DNA binding
6 Biological Process negative regulation of transcription by RNA polymerase II
7 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluJb 92 **** 74.0 Weakly correlated
2 MER31B 86 **** 99.0 Moderately correlated
3 L2a 75 n.s 99.0 Moderately correlated
4 MER67D 54 **** 99.0 Moderately correlated
5 MLT1A 52 **** 99.0 Moderately correlated
6 MIRb 46 n.s 99.0 Moderately correlated
7 L2b 39 * 99.0 Moderately correlated
8 L2c 39 n.s 99.0 Moderately correlated
9 AluJo 37 * 74.0 Weakly correlated
10 L2 37 ** 99.0 Moderately correlated
11 AluJr 32 n.s 74.0 Weakly correlated
12 MLT1B 31 **** 99.0 Moderately correlated
13 AluSx 30 n.s 74.0 Weakly correlated
14 MIRc 29 * 99.0 Moderately correlated
15 AluSx1 28 n.s 74.0 Weakly correlated
16 AluSz 26 n.s 74.0 Weakly correlated
17 MIR 26 n.s 99.0 Moderately correlated
18 MER67C 24 **** 99.0 Moderately correlated
19 MLT1K 24 **** 99.0 Moderately correlated
20 L1M1 23 * 74.0 Weakly correlated
21 SVA_D 23 **** 15.2 Weakly correlated
22 MER92B 22 **** 99.0 Moderately correlated
23 AluY 21 n.s 74.0 Weakly correlated
24 AluSq2 20 n.s 74.0 Weakly correlated
25 AluSc 19 n.s 74.0 Weakly correlated
26 MLT1D 19 * 99.0 Moderately correlated
27 MSTA 19 ** 43.0 Weakly correlated
28 AluJr4 18 *** 74.0 Weakly correlated
29 MIR3 18 n.s 99.0 Moderately correlated
30 THE1D 17 *** 43.0 Weakly correlated
31 AluSp 16 n.s 74.0 Weakly correlated
32 HERV17-int 16 **** 28.9 Weakly correlated
33 L1MEg 16 * 99.0 Moderately correlated
34 MER89 16 **** 99.0 Moderately correlated
35 L1ME1 15 n.s 99.0 Moderately correlated
36 AluSg 14 n.s 74.0 Weakly correlated
37 L1MEc 14 n.s 99.0 Moderately correlated
38 L1MEf 14 n.s 99.0 Moderately correlated
39 MSTD 14 **** 74.0 Weakly correlated
40 AluSx3 13 n.s 74.0 Weakly correlated
41 HAL1 13 n.s 99.0 Moderately correlated
42 L1M5 13 n.s 99.0 Moderately correlated
43 L1MC4 13 n.s 99.0 Moderately correlated
44 MLT1F1 13 **** 99.0 Moderately correlated
45 Harlequin-int 12 **** 74.0 Weakly correlated
46 L1MEd 12 n.s 99.0 Moderately correlated
47 MER67B 12 **** 99.0 Moderately correlated
48 MSTB 12 *** 43.0 Weakly correlated
49 L1M4 11 n.s 99.0 Moderately correlated
50 MLT1A0 11 n.s 99.0 Moderately correlated
51 MLT1O 11 **** 99.0 Moderately correlated
52 AluSz6 10 n.s 74.0 Weakly correlated
53 HERVIP10FH-int 10 **** 28.9 Weakly correlated
54 L1MA9 10 n.s 99.0 Moderately correlated
55 MLT2D 10 **** 99.0 Moderately correlated
56 MSTA-int 10 * 43.0 Weakly correlated
57 SVA_B 10 **** 15.2 Weakly correlated
58 THE1B 10 n.s 43.0 Weakly correlated
59 L1ME4b 9 n.s 99.0 Moderately correlated
60 MER54A 9 **** 87.0 Weakly correlated
61 MLT1H2 9 **** 99.0 Moderately correlated
62 MLT1J 9 n.s 99.0 Moderately correlated
63 MLT2B2 9 **** 99.0 Moderately correlated
64 MLT2B3 9 **** 99.0 Moderately correlated
65 AluSc8 8 n.s 74.0 Weakly correlated
66 FLAM_C 8 n.s 74.0 Weakly correlated
67 L1MA1 8 n.s 74.0 Weakly correlated
68 L1MA3 8 n.s 74.0 Weakly correlated
69 L1MDa 8 n.s 99.0 Moderately correlated
70 L1ME4a 8 n.s 99.0 Moderately correlated
71 L1PB1 8 n.s 74.0 Weakly correlated
72 LTR10A 8 **** 28.9 Weakly correlated
73 MIR1_Amn 8 *** 319.0 Weakly correlated
74 THE1C 8 n.s 43.0 Weakly correlated
75 THE1D-int 8 * 28.9 Weakly correlated
76 L1MB3 7 n.s 99.0 Moderately correlated
77 L1MC1 7 n.s 99.0 Moderately correlated
78 L1MC5a 7 n.s 99.0 Moderately correlated
79 L1MEj 7 **** 99.0 Moderately correlated
80 L1PA17 7 n.s 74.0 Weakly correlated
81 L1PA5 7 n.s 19.6 Weakly correlated
82 LTR8 7 ** 43.0 Weakly correlated
83 MLT1N2 7 *** 99.0 Moderately correlated
84 AluSq 6 n.s 74.0 Weakly correlated
85 L1MC4a 6 n.s 99.0 Moderately correlated
86 L1ME3 6 n.s 99.0 Moderately correlated
87 L1ME3A 6 n.s 99.0 Moderately correlated
88 L1P3 6 n.s 74.0 Weakly correlated
89 L1PA16 6 n.s 74.0 Weakly correlated
90 L1PA2 6 n.s 15.2 Weakly correlated
91 LTR33 6 n.s 99.0 Moderately correlated
92 MSTB1 6 * 74.0 Weakly correlated
93 AluSx4 5 n.s 74.0 Weakly correlated
94 ERVL-E-int 5 n.s 99.0 Moderately correlated
95 HERVS71-int 5 **** 28.9 Weakly correlated
96 L1M3 5 n.s 99.0 Moderately correlated
97 L1MB5 5 n.s 99.0 Moderately correlated
98 L1MB7 5 n.s 99.0 Moderately correlated
99 L1MC5 5 n.s 99.0 Moderately correlated
100 LTR13 5 **** 19.6 Weakly correlated
101 LTR16B2 5 *** 99.0 Moderately correlated
102 MER41B 5 ** 74.0 Weakly correlated
103 MLT1H1 5 * 99.0 Moderately correlated
104 L1MA8 4 n.s 87.0 Weakly correlated
105 L1MB8 4 n.s 99.0 Moderately correlated
106 L1MCa 4 n.s 99.0 Moderately correlated
107 L1MD3 4 n.s 99.0 Moderately correlated
108 L1P1 4 n.s 19.6 Weakly correlated
109 L3 4 n.s 99.0 Moderately correlated
110 LTR16 4 * 99.0 Moderately correlated
111 LTR33A_ 4 ** 99.0 Moderately correlated
112 LTR35 4 **** 43.0 Weakly correlated
113 MER52C 4 *** 74.0 Weakly correlated
114 MER54B 4 **** 87.0 Weakly correlated
115 MER57-int 4 * 87.0 Weakly correlated
116 MER65-int 4 ** 87.0 Weakly correlated
117 MER67A 4 **** 99.0 Moderately correlated
118 MLT1C 4 n.s 94.0 Highly correlated
119 MLT1E1A 4 * 99.0 Moderately correlated
120 MLT1G3 4 * 99.0 Moderately correlated
121 MLT1H 4 n.s 99.0 Moderately correlated
122 MLT1L 4 n.s 99.0 Moderately correlated
123 MLT2B4 4 n.s 99.0 Moderately correlated
124 MLT2C2 4 *** 99.0 Moderately correlated
125 SVA_A 4 *** 19.6 Weakly correlated
126 SVA_F 4 ** 0.0 Weakly correlated
127 Alu 3 *** 74.0 Weakly correlated
128 AluSc5 3 n.s 74.0 Weakly correlated
129 AluSg4 3 n.s 74.0 Weakly correlated
130 FRAM 3 n.s 74.0 Weakly correlated
131 HAL1M8 3 n.s 99.0 Moderately correlated
132 HAL1ME 3 n.s 99.0 Moderately correlated
133 HAL1b 3 n.s 99.0 Moderately correlated
134 HERV9NC-int 3 * 19.6 Weakly correlated
135 HERVI-int 3 *** 28.9 Weakly correlated
136 HUERS-P3-int 3 * 43.0 Weakly correlated
137 HUERS-P3b-int 3 ** 43.0 Weakly correlated
138 L1M3f 3 * 87.0 Weakly correlated
139 L1M4c 3 n.s 99.0 Moderately correlated
140 L1MA2 3 n.s 74.0 Weakly correlated
141 L1MB4 3 n.s 99.0 Moderately correlated
142 L1MD1 3 n.s 99.0 Moderately correlated
143 L1ME2 3 n.s 99.0 Moderately correlated
144 L1ME3B 3 n.s 99.0 Moderately correlated
145 L1PA15 3 n.s 74.0 Weakly correlated
146 LTR16A 3 n.s 99.0 Moderately correlated
147 LTR9 3 ** 43.0 Weakly correlated
148 MER4-int 3 n.s 74.0 Weakly correlated
149 MER50 3 n.s 43.0 Weakly correlated
150 MER51A 3 ** 43.0 Weakly correlated
151 MER92D 3 **** 99.0 Moderately correlated
152 MLT1F2 3 n.s 99.0 Moderately correlated
153 MLT1G1 3 n.s 99.0 Moderately correlated
154 MamGypLTR1d 3 **** 99.0 Moderately correlated
155 SVA_C 3 ** 15.2 Weakly correlated
156 THE1C-int 3 n.s 43.0 Weakly correlated
157 AluYk2 2 ** 19.6 Weakly correlated
158 AluYk4 2 * 15.2 Weakly correlated
159 AluYm1 2 n.s 19.6 Weakly correlated
160 AmnSINE1 2 ** 319.0 Weakly correlated
161 FAM 2 n.s 87.0 Weakly correlated
162 FLAM_A 2 n.s 74.0 Weakly correlated
163 HERV35I-int 2 * 43.0 Weakly correlated
164 HERVFH19-int 2 *** 43.0 Weakly correlated
165 L1M3c 2 n.s 99.0 Moderately correlated
166 L1M6B 2 ** 99.0 Moderately correlated
167 L1M7 2 n.s 99.0 Moderately correlated
168 L1MA10 2 n.s 99.0 Moderately correlated
169 L1MA4 2 n.s 87.0 Weakly correlated
170 L1MB1 2 n.s 99.0 Moderately correlated
171 L1MCc 2 n.s 99.0 Moderately correlated
172 L1MD2 2 n.s 99.0 Moderately correlated
173 L1ME2z 2 n.s 99.0 Moderately correlated
174 L1ME5 2 n.s 99.0 Moderately correlated
175 L1P4 2 n.s 74.0 Weakly correlated
176 L1PA10 2 n.s 74.0 Weakly correlated
177 L1PA4 2 n.s 19.6 Weakly correlated
178 L1PA7 2 n.s 74.0 Weakly correlated
179 L1PA8 2 n.s 74.0 Weakly correlated
180 L1PB 2 n.s 74.0 Weakly correlated
181 L1PB2 2 n.s 74.0 Weakly correlated
182 LOR1b 2 * 74.0 Weakly correlated
183 LTR102_Mam 2 ** 99.0 Moderately correlated
184 LTR103b_Mam 2 *** 99.0 Moderately correlated
185 LTR10F 2 ** 28.9 Weakly correlated
186 LTR12D 2 * 19.6 Weakly correlated
187 LTR16D 2 ** 99.0 Moderately correlated
188 LTR2B 2 ** 19.6 Weakly correlated
189 LTR33A 2 n.s 99.0 Moderately correlated
190 LTR33C 2 ** 99.0 Moderately correlated
191 LTR50 2 n.s 99.0 Moderately correlated
192 LTR78 2 n.s 99.0 Moderately correlated
193 LTR81B 2 ** 99.0 Moderately correlated
194 MER21-int 2 n.s 99.0 Moderately correlated
195 MER34B 2 ** 87.0 Weakly correlated
196 MER39B 2 * 74.0 Weakly correlated
197 MER41-int 2 n.s 74.0 Weakly correlated
198 MER4A1 2 n.s 74.0 Weakly correlated
199 MER52-int 2 n.s 99.0 Moderately correlated
200 MER57E1 2 ** 87.0 Weakly correlated
201 MER73 2 *** 87.0 Weakly correlated
202 MER74A 2 n.s 99.0 Moderately correlated
203 MER90a 2 * 99.0 Moderately correlated
204 MER92-int 2 * 99.0 Moderately correlated
205 MLT1A1 2 n.s 87.0 Weakly correlated
206 MLT1G 2 n.s 99.0 Moderately correlated
207 MLT1I 2 n.s 99.0 Moderately correlated
208 MLT1J1-int 2 ** 99.0 Moderately correlated
209 MLT1J2 2 n.s 99.0 Moderately correlated
210 MLT2B5 2 *** 87.0 Weakly correlated
211 MamGyp-int 2 ** 99.0 Moderately correlated
212 MamGypLTR3a 2 * 99.0 Moderately correlated
213 Plat_L3 2 * 99.0 Moderately correlated
214 X9_LINE 2 *** 319.0 Weakly correlated
215 AluYf1 1 n.s 19.6 Weakly correlated
216 AluYh9 1 *** 15.2 Weakly correlated
217 ERV3-16A3_I-int 1 n.s 99.0 Moderately correlated
218 ERVL-B4-int 1 n.s 99.0 Moderately correlated
219 HERV16-int 1 n.s 99.0 Moderately correlated
220 HERV9-int 1 n.s 28.9 Weakly correlated
221 HERVIP10F-int 1 n.s 28.9 Weakly correlated
222 HERVK14-int 1 n.s 28.9 Weakly correlated
223 L1M4a2 1 n.s 99.0 Moderately correlated
224 L1M4b 1 n.s 99.0 Moderately correlated
225 L1MA5 1 n.s 87.0 Weakly correlated
226 L1MA5A 1 n.s 87.0 Weakly correlated
227 L1MB2 1 n.s 99.0 Moderately correlated
228 L1MC 1 n.s 99.0 Moderately correlated
229 L1MC3 1 n.s 99.0 Moderately correlated
230 L1MCb 1 n.s 99.0 Moderately correlated
231 L1ME3E 1 n.s 99.0 Moderately correlated
232 L1ME3F 1 n.s 99.0 Moderately correlated
233 L1ME3G 1 n.s 99.0 Moderately correlated
234 L1MEa 1 * 99.0 Moderately correlated
235 L1MEb 1 n.s 99.0 Moderately correlated
236 L1MEg1 1 n.s 99.0 Moderately correlated
237 L1PA8A 1 n.s 74.0 Weakly correlated
238 L1PBa 1 n.s 74.0 Weakly correlated
239 L1PREC2 1 n.s 43.0 Weakly correlated
240 L2-1_AMi 1 * 319.0 Weakly correlated
241 L2-3_Crp 1 n.s 431.0 Weakly correlated
242 L3b 1 n.s 99.0 Moderately correlated
243 L4_C_Mam 1 n.s 99.0 Moderately correlated
244 LFSINE_Vert 1 n.s 319.0 Weakly correlated
245 LTR06 1 *** 74.0 Weakly correlated
246 LTR103_Mam 1 * 99.0 Moderately correlated
247 LTR16A2 1 n.s 99.0 Moderately correlated
248 LTR24B 1 * 74.0 Weakly correlated
249 LTR26 1 n.s 74.0 Weakly correlated
250 LTR2752 1 * 43.0 Weakly correlated
251 LTR29 1 * 43.0 Weakly correlated
252 LTR38B 1 ** 74.0 Weakly correlated
253 LTR40A1 1 * 99.0 Moderately correlated
254 LTR48 1 n.s 74.0 Weakly correlated
255 LTR49 1 n.s 74.0 Weakly correlated
256 LTR54 1 n.s 74.0 Weakly correlated
257 LTR64 1 * 74.0 Weakly correlated
258 LTR9A1 1 * 43.0 Weakly correlated
259 LTR9D 1 n.s 43.0 Weakly correlated
260 MER21B 1 n.s 99.0 Moderately correlated
261 MER34 1 n.s 87.0 Weakly correlated
262 MER34A 1 n.s 99.0 Moderately correlated
263 MER4B-int 1 n.s 99.0 Moderately correlated
264 MER50-int 1 n.s 43.0 Weakly correlated
265 MER57A-int 1 n.s 43.0 Weakly correlated
266 MER61-int 1 n.s 43.0 Weakly correlated
267 MER61D 1 * 43.0 Weakly correlated
268 MER65A 1 n.s 74.0 Weakly correlated
269 MER65C 1 * 74.0 Weakly correlated
270 MER68 1 n.s 99.0 Moderately correlated
271 MER68-int 1 * 99.0 Moderately correlated
272 MER74B 1 n.s 99.0 Moderately correlated
273 MLT1E2 1 n.s 99.0 Moderately correlated
274 MLT1F 1 n.s 99.0 Moderately correlated
275 MLT1J1 1 n.s 99.0 Moderately correlated
276 MLT2B1 1 n.s 99.0 Moderately correlated
277 MSTB2 1 n.s 74.0 Weakly correlated
278 MSTC-int 1 * 74.0 Weakly correlated
279 MamGypLTR1a 1 n.s 99.0 Moderately correlated
280 MamGypLTR2c 1 * 99.0 Moderately correlated
281 Mam_R4 1 * 99.0 Moderately correlated
282 PABL_A 1 n.s 43.0 Weakly correlated
283 Penelope1_Vert 1 * 319.0 Weakly correlated
284 SVA_E 1 n.s 0.0 Weakly correlated
285 UCON51 1 **** 319.0 Weakly correlated
286 X7A_LINE 1 * 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MLT1A 23 **** 99.0 Moderately correlated
2 AluJb 22 n.s 74.0 Weakly correlated
3 L2a 14 n.s 99.0 Moderately correlated
4 THE1D 12 * 43.0 Weakly correlated
5 MSTA 12 n.s 43.0 Weakly correlated
6 SVA_D 12 **** 15.2 Weakly correlated
7 HERV17-int 11 **** 28.9 Weakly correlated
8 L2b 10 n.s 99.0 Moderately correlated
9 AluSx 9 n.s 74.0 Weakly correlated
10 L1M1 8 n.s 74.0 Weakly correlated
11 MSTB 8 * 43.0 Weakly correlated
12 MLT1B 8 n.s 99.0 Moderately correlated
13 AluSq2 7 n.s 74.0 Weakly correlated
14 L2 7 n.s 99.0 Moderately correlated
15 AluJr4 6 n.s 74.0 Weakly correlated
16 HERVIP10FH-int 6 **** 28.9 Weakly correlated
17 Harlequin-int 6 *** 74.0 Weakly correlated
18 MLT1K 6 n.s 99.0 Moderately correlated
19 MLT1D 6 n.s 99.0 Moderately correlated
20 MSTD 6 n.s 74.0 Weakly correlated
21 SVA_B 6 **** 15.2 Weakly correlated
22 AluJo 5 n.s 74.0 Weakly correlated
23 L1M5 5 n.s 99.0 Moderately correlated
24 L1MEg 5 n.s 99.0 Moderately correlated
25 MLT2B3 5 * 99.0 Moderately correlated
26 MLT1O 5 ** 99.0 Moderately correlated
27 MLT2B2 5 ** 99.0 Moderately correlated
28 MER54A 5 **** 87.0 Weakly correlated
29 MLT1A0 5 n.s 99.0 Moderately correlated
30 AluSq 4 n.s 74.0 Weakly correlated
31 AluSx1 4 n.s 74.0 Weakly correlated
32 AluSz 4 n.s 74.0 Weakly correlated
33 L1MA3 4 n.s 74.0 Weakly correlated
34 L2c 4 n.s 99.0 Moderately correlated
35 MIRb 4 n.s 99.0 Moderately correlated
36 AluJr 3 n.s 74.0 Weakly correlated
37 AluSg 3 n.s 74.0 Weakly correlated
38 AluSp 3 n.s 74.0 Weakly correlated
39 AluSx3 3 n.s 74.0 Weakly correlated
40 AluSz6 3 n.s 74.0 Weakly correlated
41 HAL1 3 n.s 99.0 Moderately correlated
42 HERVS71-int 3 ** 28.9 Weakly correlated
43 L1M4 3 n.s 99.0 Moderately correlated
44 L1MC1 3 n.s 99.0 Moderately correlated
45 L1ME4b 3 n.s 99.0 Moderately correlated
46 L1MEc 3 n.s 99.0 Moderately correlated
47 L1MEd 3 n.s 99.0 Moderately correlated
48 L1MEf 3 n.s 99.0 Moderately correlated
49 L1PA16 3 n.s 74.0 Weakly correlated
50 L1PA17 3 n.s 74.0 Weakly correlated
51 LTR16B2 3 ** 99.0 Moderately correlated
52 LTR35 3 **** 43.0 Weakly correlated
53 MLT1H2 3 n.s 99.0 Moderately correlated
54 MSTB1 3 n.s 74.0 Weakly correlated
55 MLT2D 3 n.s 99.0 Moderately correlated
56 MLT1F1 3 n.s 99.0 Moderately correlated
57 SVA_A 3 ** 19.6 Weakly correlated
58 MIR 3 n.s 99.0 Moderately correlated
59 AluSc 2 n.s 74.0 Weakly correlated
60 AluY 2 n.s 74.0 Weakly correlated
61 FLAM_C 2 n.s 74.0 Weakly correlated
62 HAL1M8 2 n.s 99.0 Moderately correlated
63 HAL1ME 2 n.s 99.0 Moderately correlated
64 HAL1b 2 n.s 99.0 Moderately correlated
65 HERV9NC-int 2 n.s 19.6 Weakly correlated
66 HUERS-P3b-int 2 * 43.0 Weakly correlated
67 L1M3f 2 n.s 87.0 Weakly correlated
68 L1MA2 2 n.s 74.0 Weakly correlated
69 L1MB4 2 n.s 99.0 Moderately correlated
70 L1MC4 2 n.s 99.0 Moderately correlated
71 L1MC5a 2 n.s 99.0 Moderately correlated
72 L1MD3 2 n.s 99.0 Moderately correlated
73 L1ME1 2 n.s 99.0 Moderately correlated
74 L1ME3A 2 n.s 99.0 Moderately correlated
75 L1PA15 2 n.s 74.0 Weakly correlated
76 LTR102_Mam 2 ** 99.0 Moderately correlated
77 LTR9 2 * 43.0 Weakly correlated
78 MIR1_Amn 2 n.s 319.0 Weakly correlated
79 MamGypLTR1d 2 ** 99.0 Moderately correlated
80 MIRc 2 n.s 99.0 Moderately correlated
81 SVA_C 2 * 15.2 Weakly correlated
82 SVA_F 2 n.s 0.0 Weakly correlated
83 THE1C 2 n.s 43.0 Weakly correlated
84 MER90a 2 * 99.0 Moderately correlated
85 MER52-int 2 n.s 99.0 Moderately correlated
86 MER65-int 2 n.s 87.0 Weakly correlated
87 MLT1G 2 n.s 99.0 Moderately correlated
88 MLT1G3 2 n.s 99.0 Moderately correlated
89 MER54B 2 ** 87.0 Weakly correlated
90 Plat_L3 2 * 99.0 Moderately correlated
91 Alu 1 n.s 74.0 Weakly correlated
92 AluSg4 1 n.s 74.0 Weakly correlated
93 FAM 1 n.s 87.0 Weakly correlated
94 FRAM 1 n.s 74.0 Weakly correlated
95 HERV35I-int 1 n.s 43.0 Weakly correlated
96 HERVFH19-int 1 * 43.0 Weakly correlated
97 HERVI-int 1 * 28.9 Weakly correlated
98 L1M4a2 1 n.s 99.0 Moderately correlated
99 L1M7 1 n.s 99.0 Moderately correlated
100 L1MA1 1 n.s 74.0 Weakly correlated
101 L1MA10 1 n.s 99.0 Moderately correlated
102 L1MA5A 1 n.s 87.0 Weakly correlated
103 L1MB5 1 n.s 99.0 Moderately correlated
104 L1MB7 1 n.s 99.0 Moderately correlated
105 L1MC 1 n.s 99.0 Moderately correlated
106 L1MCa 1 n.s 99.0 Moderately correlated
107 L1MCc 1 n.s 99.0 Moderately correlated
108 L1MD2 1 n.s 99.0 Moderately correlated
109 L1ME2 1 n.s 99.0 Moderately correlated
110 L1ME2z 1 n.s 99.0 Moderately correlated
111 L1ME3 1 n.s 99.0 Moderately correlated
112 L1ME5 1 n.s 99.0 Moderately correlated
113 LTR33A 1 n.s 99.0 Moderately correlated
114 LTR33A_ 1 n.s 99.0 Moderately correlated
115 LTR78 1 n.s 99.0 Moderately correlated
116 MER34B 1 * 87.0 Weakly correlated
117 HERVIP10F-int 1 n.s 28.9 Weakly correlated
118 MER61D 1 * 43.0 Weakly correlated
119 MER67D 1 n.s 99.0 Moderately correlated
120 MLT1E1A 1 n.s 99.0 Moderately correlated
121 AluSc5 1 n.s 74.0 Weakly correlated
122 AluSc8 1 n.s 74.0 Weakly correlated
123 L1M4c 1 n.s 99.0 Moderately correlated
124 L1PB1 1 n.s 74.0 Weakly correlated
125 MER31B 1 n.s 99.0 Moderately correlated
126 MER61-int 1 n.s 43.0 Weakly correlated
127 MER68-int 1 * 99.0 Moderately correlated
128 MLT1C 1 n.s 94.0 Highly correlated
129 MER57E1 1 * 87.0 Weakly correlated
130 MLT1J1-int 1 * 99.0 Moderately correlated
131 MLT2B5 1 * 87.0 Weakly correlated
132 MLT2C2 1 n.s 99.0 Moderately correlated
133 MER73 1 * 87.0 Weakly correlated
134 MLT1A1 1 n.s 87.0 Weakly correlated
135 MLT2B4 1 n.s 99.0 Moderately correlated
136 L1MCb 1 n.s 99.0 Moderately correlated
137 MLT1F2 1 n.s 99.0 Moderately correlated
138 Penelope1_Vert 1 * 319.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 HERV17-INT 28.9 Weakly correlated
2 HERVIP10FH-INT 28.9 Weakly correlated
3 HARLEQUIN-INT 74.0 Weakly correlated
4 L1M1 74.0 Weakly correlated
5 MLT1K 99.0 Moderately correlated