ZRdb KZFP & Repeats
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Human_ZNF585A

  • Protein
    Zinc finger protein 585A
  • Length
    769
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    99.0 Mya
  • Uniprot_ID
    Q6P3V2
  • NCBI_ID
    199704
Sequence:
MPANWTSPQKSSALAPEDHGSSYEGSVSFRDVAIDFSREEWRHLDPSQRNLYRDVMLETYSHLLSVGYQVPEAEVVMLEQGKEPWALQGERPRQSCPGEKLWDHNQCRKILSYKQVSSQPQKMYPGEKAYECAKFEKIFTQKSQLKVHLKVLAGEKLYVCIECGKAFVQKPEFIIHQKTHMREKPFKCNECGKSFFQVSSLFRHQRIHTGEKLYECSQCGKGFSYNSDLSIHEKIHTGERHHECTDCGKAFTQKSTLKMHQKIHTGERSYICIECGQAFIQKTHLIAHRRIHTGEKPYECSNCGKSFISKSQLQVHQRVHTRVKPYICTEYGKVFSNNSNLVTHKKVQSREKSSICTECGKAFTYRSELIIHQRIHTGEKPYECSDCGKAFTQKSALTVHQRIHTGEKSYICMKCGLAFIQKAHLIAHQIIHTGEKPHKCGHCGKLFTSKSQLHVHKRIHTGEKPYMCNKCGKAFTNRSNLITHQKTHTGEKSYICSKCGKAFTQRSDLITHQRIHTGEKPYECNTCGKAFTQKSHLNIHQKIHTGERQYECHECGKAFNQKSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYECSDCGKSFTSKSQLLVHQPVHTGEKPYVCAECGKAFSGRSNLSKHQKTHTGEKPYICSECGKTFRQKSELITHHRIHTGEKPYECSDCGKSFTKKSQLQVHQRIHTGEKPYVCAECGKAFTDRSNLNKHQTTHTGDKPYKCGICGKGFVQKSVFSVHQSSHA
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 27..97
2 C2h2 158..180
3 C2h2 186..208
4 C2h2 214..236
5 C2h2 242..264
6 C2h2 270..292
7 C2h2 298..320
8 dec2h2 326..348
9 C2h2 354..376
10 C2h2 382..404
11 C2h2 410..432
12 C2h2 438..460
13 C2h2 466..488
14 C2h2 494..516
15 C2h2 522..544
16 C2h2 550..572
17 C2h2 578..600
18 C2h2 606..628
19 C2h2 634..656
20 C2h2 662..684
21 C2h2 690..712
22 C2h2 718..740
23 C2h2 746..768
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription activator activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 151 **** 99.0 Highly correlated
2 AluJb 115 **** 74.0 Weakly correlated
3 AluSx 89 *** 74.0 Weakly correlated
4 L2c 89 **** 99.0 Highly correlated
5 L1MEg 79 **** 99.0 Highly correlated
6 AluSz 77 ** 74.0 Weakly correlated
7 L2 76 **** 99.0 Highly correlated
8 AluSx1 74 n.s 74.0 Weakly correlated
9 AluJr 65 **** 74.0 Weakly correlated
10 AluY 64 n.s 74.0 Weakly correlated
11 L2b 64 **** 99.0 Highly correlated
12 MIR 64 * 99.0 Highly correlated
13 AluJo 58 **** 74.0 Weakly correlated
14 HAL1 54 **** 99.0 Highly correlated
15 MIRb 52 n.s 99.0 Highly correlated
16 AluSq2 50 ** 74.0 Weakly correlated
17 AluSp 48 *** 74.0 Weakly correlated
18 L1MEc 47 **** 99.0 Highly correlated
19 AluSz6 44 **** 74.0 Weakly correlated
20 L1ME1 44 ** 99.0 Highly correlated
21 L1M5 41 * 99.0 Highly correlated
22 L1MCa 41 **** 99.0 Highly correlated
23 L1MEf 35 **** 99.0 Highly correlated
24 L1M4 33 *** 99.0 Highly correlated
25 L1MA4 31 **** 87.0 Weakly correlated
26 MIRc 30 n.s 99.0 Highly correlated
27 AluSg 29 * 74.0 Weakly correlated
28 L1MDa 28 **** 99.0 Highly correlated
29 AluSx3 27 ** 74.0 Weakly correlated
30 L1MA8 26 **** 87.0 Weakly correlated
31 L1MA9 26 ** 99.0 Highly correlated
32 MIR3 26 * 99.0 Highly correlated
33 L1M2 25 **** 99.0 Highly correlated
34 L1ME3A 25 **** 99.0 Highly correlated
35 L1MEd 24 ** 99.0 Highly correlated
36 AluSc 23 n.s 74.0 Weakly correlated
37 L1MC1 23 * 99.0 Highly correlated
38 L1PA7 23 n.s 74.0 Weakly correlated
39 L1MB3 22 * 99.0 Highly correlated
40 AluSq 21 ** 74.0 Weakly correlated
41 FLAM_C 21 **** 74.0 Weakly correlated
42 L1M4c 20 **** 99.0 Highly correlated
43 L1MC4 20 n.s 99.0 Highly correlated
44 L3 19 n.s 99.0 Highly correlated
45 L1MD1 18 *** 99.0 Highly correlated
46 L1M1 17 n.s 74.0 Weakly correlated
47 L1PA3 17 n.s 19.6 Weakly correlated
48 L1PA5 17 n.s 19.6 Weakly correlated
49 L1MC3 16 n.s 99.0 Highly correlated
50 L1PA16 16 n.s 74.0 Weakly correlated
51 AluSc8 15 n.s 74.0 Weakly correlated
52 L1M3 15 **** 99.0 Highly correlated
53 L1MA3 15 n.s 74.0 Weakly correlated
54 L1PB1 15 n.s 74.0 Weakly correlated
55 L1MB2 14 ** 99.0 Highly correlated
56 L1MB7 14 n.s 99.0 Highly correlated
57 MLT1K 14 ** 99.0 Highly correlated
58 L1MA6 13 ** 87.0 Weakly correlated
59 L1MB1 13 ** 99.0 Highly correlated
60 HAL1ME 12 *** 99.0 Highly correlated
61 L1MA7 12 n.s 87.0 Weakly correlated
62 L1MD2 12 n.s 99.0 Highly correlated
63 L1ME3B 12 ** 99.0 Highly correlated
64 L1ME4a 12 n.s 99.0 Highly correlated
65 L1PREC2 12 n.s 43.0 Weakly correlated
66 LTR33 12 *** 99.0 Highly correlated
67 MER11A 12 **** 28.9 Weakly correlated
68 AluJr4 11 n.s 74.0 Weakly correlated
69 FRAM 11 **** 74.0 Weakly correlated
70 L1MA2 11 n.s 74.0 Weakly correlated
71 L1MB8 11 n.s 99.0 Highly correlated
72 L1ME3Cz 11 * 99.0 Highly correlated
73 L1PA15 11 n.s 74.0 Weakly correlated
74 L1PA4 11 n.s 19.6 Weakly correlated
75 L1MA5 10 * 87.0 Weakly correlated
76 L1ME3 10 n.s 99.0 Highly correlated
77 L1PA10 10 n.s 74.0 Weakly correlated
78 L1PA6 10 n.s 28.9 Weakly correlated
79 MLT1J 10 n.s 99.0 Highly correlated
80 AluSx4 9 n.s 74.0 Weakly correlated
81 L1M4b 9 * 99.0 Highly correlated
82 L1MB5 9 n.s 99.0 Highly correlated
83 L1MD 9 * 99.0 Highly correlated
84 L1MEi 9 ** 99.0 Highly correlated
85 L1PA13 9 n.s 74.0 Weakly correlated
86 AluSg7 8 * 74.0 Weakly correlated
87 L1MA4A 8 n.s 87.0 Weakly correlated
88 L1MC5 8 n.s 99.0 Highly correlated
89 L1MD3 8 ** 99.0 Highly correlated
90 L1ME3E 8 ** 99.0 Highly correlated
91 L1MEb 8 **** 99.0 Highly correlated
92 L1P2 8 * 28.9 Weakly correlated
93 L1PA2 8 n.s 15.2 Weakly correlated
94 L2-3_Crp 8 **** 431.0 Weakly correlated
95 FAM 7 **** 87.0 Weakly correlated
96 L1MC5a 7 n.s 99.0 Highly correlated
97 L1MCb 7 ** 99.0 Highly correlated
98 L1ME4b 7 n.s 99.0 Highly correlated
99 MLT1A0 7 n.s 99.0 Highly correlated
100 MLT1D 7 n.s 99.0 Highly correlated
101 MLT1H 7 n.s 99.0 Highly correlated
102 THE1B 7 n.s 43.0 Weakly correlated
103 AluSg4 6 n.s 74.0 Weakly correlated
104 ERV3-16A3_I-int 6 n.s 99.0 Highly correlated
105 ERVL-E-int 6 n.s 99.0 Highly correlated
106 FLAM_A 6 * 74.0 Weakly correlated
107 L1M6 6 * 99.0 Highly correlated
108 L1M7 6 ** 99.0 Highly correlated
109 L1MB4 6 n.s 99.0 Highly correlated
110 L1MC4a 6 n.s 99.0 Highly correlated
111 L1ME2 6 n.s 99.0 Highly correlated
112 L1PA11 6 n.s 74.0 Weakly correlated
113 L1PA17 6 n.s 74.0 Weakly correlated
114 L1PBa 6 n.s 74.0 Weakly correlated
115 LTR50 6 *** 99.0 Highly correlated
116 MER57-int 6 ** 87.0 Weakly correlated
117 MLT1A 6 n.s 99.0 Highly correlated
118 MLT1C 6 n.s 94.0 Weakly correlated
119 AluSc5 5 n.s 74.0 Weakly correlated
120 L1MC2 5 n.s 99.0 Highly correlated
121 L1ME3G 5 n.s 99.0 Highly correlated
122 L1P3 5 n.s 74.0 Weakly correlated
123 L1PA8 5 n.s 74.0 Weakly correlated
124 LTR13 5 *** 19.6 Weakly correlated
125 MIR1_Amn 5 * 319.0 Weakly correlated
126 MSTB 5 n.s 43.0 Weakly correlated
127 AluYa5 4 n.s 15.2 Weakly correlated
128 AluYj4 4 * 0.0 Weakly correlated
129 L1M4a1 4 n.s 99.0 Highly correlated
130 L1MA10 4 n.s 99.0 Highly correlated
131 L1P4 4 n.s 74.0 Weakly correlated
132 L1P4a 4 ** 74.0 Weakly correlated
133 L1PA14 4 n.s 74.0 Weakly correlated
134 L1PA8A 4 n.s 74.0 Weakly correlated
135 L4_B_Mam 4 * 99.0 Highly correlated
136 LTR10A 4 **** 28.9 Weakly correlated
137 LTR16 4 * 99.0 Highly correlated
138 MER4-int 4 n.s 74.0 Weakly correlated
139 MER50 4 n.s 43.0 Weakly correlated
140 MER57A-int 4 * 43.0 Weakly correlated
141 MLT1B 4 n.s 99.0 Highly correlated
142 MLT1F2 4 n.s 99.0 Highly correlated
143 MLT1H2 4 * 99.0 Highly correlated
144 MLT1J1 4 * 99.0 Highly correlated
145 MLT1J2 4 n.s 99.0 Highly correlated
146 MLT1L 4 n.s 99.0 Highly correlated
147 MLT1N2 4 * 99.0 Highly correlated
148 MSTB1 4 n.s 74.0 Weakly correlated
149 MSTD 4 n.s 74.0 Weakly correlated
150 AluYc 3 n.s 74.0 Weakly correlated
151 ERVL-B4-int 3 n.s 99.0 Highly correlated
152 HAL1M8 3 n.s 99.0 Highly correlated
153 HERVK-int 3 * 28.9 Weakly correlated
154 HERVL-int 3 n.s 74.0 Weakly correlated
155 Harlequin-int 3 n.s 74.0 Weakly correlated
156 L1M3b 3 * 99.0 Highly correlated
157 L1MA1 3 n.s 74.0 Weakly correlated
158 L1MC 3 n.s 99.0 Highly correlated
159 L1MCc 3 n.s 99.0 Highly correlated
160 L1MDb 3 * 99.0 Highly correlated
161 L1ME3C 3 n.s 99.0 Highly correlated
162 L1ME3D 3 n.s 99.0 Highly correlated
163 L1ME4c 3 n.s 99.0 Highly correlated
164 L1ME5 3 n.s 99.0 Highly correlated
165 L1PB4 3 n.s 99.0 Highly correlated
166 L1PBa1 3 n.s 74.0 Weakly correlated
167 L1PBb 3 ** 74.0 Weakly correlated
168 L3b 3 n.s 99.0 Highly correlated
169 LFSINE_Vert 3 ** 319.0 Weakly correlated
170 LOR1-int 3 * 74.0 Weakly correlated
171 LTR1A2 3 * 43.0 Weakly correlated
172 LTR25 3 *** 43.0 Weakly correlated
173 LTR5B 3 ** 28.9 Weakly correlated
174 LTR78 3 n.s 99.0 Highly correlated
175 LTR85b 3 ** 99.0 Highly correlated
176 MER21-int 3 * 99.0 Highly correlated
177 MER41A 3 n.s 74.0 Weakly correlated
178 MER90a 3 ** 99.0 Highly correlated
179 MLT1F 3 n.s 99.0 Highly correlated
180 MLT1I 3 n.s 99.0 Highly correlated
181 MSTA 3 n.s 43.0 Weakly correlated
182 Plat_L3 3 * 99.0 Highly correlated
183 Alu 2 * 74.0 Weakly correlated
184 AluSq10 2 n.s 74.0 Weakly correlated
185 AluSq4 2 n.s 74.0 Weakly correlated
186 AluYe5 2 * 74.0 Weakly correlated
187 AluYf1 2 n.s 19.6 Weakly correlated
188 AluYh3 2 n.s 15.2 Weakly correlated
189 AluYm1 2 n.s 19.6 Weakly correlated
190 AmnSINE1 2 * 319.0 Weakly correlated
191 HAL1b 2 n.s 99.0 Highly correlated
192 HUERS-P3-int 2 n.s 43.0 Weakly correlated
193 L1M2c 2 * 87.0 Weakly correlated
194 L1M3e 2 n.s 99.0 Highly correlated
195 L1ME2z 2 n.s 99.0 Highly correlated
196 L1MEh 2 n.s 99.0 Highly correlated
197 L1MEj 2 n.s 99.0 Highly correlated
198 L1P1 2 n.s 19.6 Weakly correlated
199 L1PB3 2 n.s 74.0 Weakly correlated
200 L4_C_Mam 2 n.s 99.0 Highly correlated
201 LTR10C 2 * 28.9 Weakly correlated
202 LTR16C 2 n.s 99.0 Highly correlated
203 LTR17 2 n.s 28.9 Weakly correlated
204 LTR25-int 2 n.s 43.0 Weakly correlated
205 LTR48B 2 * 74.0 Weakly correlated
206 LTR60B 2 *** 74.0 Weakly correlated
207 LTR79 2 n.s 99.0 Highly correlated
208 LTR84a 2 ** 99.0 Highly correlated
209 LTR8B 2 n.s 43.0 Weakly correlated
210 MER101-int 2 n.s 74.0 Weakly correlated
211 MER4B-int 2 n.s 99.0 Highly correlated
212 MER50-int 2 * 43.0 Weakly correlated
213 MER51-int 2 * 43.0 Weakly correlated
214 MER57A1 2 * 43.0 Weakly correlated
215 MLT1E2 2 n.s 99.0 Highly correlated
216 MLT1G 2 n.s 99.0 Highly correlated
217 MLT1M 2 * 99.0 Highly correlated
218 MLT2C2 2 * 99.0 Highly correlated
219 MSTB2 2 n.s 74.0 Weakly correlated
220 MSTC 2 n.s 74.0 Weakly correlated
221 MamRTE1 2 n.s 99.0 Highly correlated
222 MamRep605 2 n.s 99.0 Highly correlated
223 MamSINE1 2 n.s 99.0 Highly correlated
224 THE1D 2 n.s 43.0 Weakly correlated
225 THE1D-int 2 n.s 28.9 Weakly correlated
226 X7A_LINE 2 ** 319.0 Weakly correlated
227 AluYc3 1 * 74.0 Weakly correlated
228 AluYg6 1 * 15.2 Weakly correlated
229 AluYh9 1 *** 15.2 Weakly correlated
230 AluYk12 1 ** 15.2 Weakly correlated
231 CR1-16_AMi 1 ** 319.0 Weakly correlated
232 CR1_Mam 1 n.s 99.0 Highly correlated
233 ERV24B_Prim-int 1 n.s 74.0 Weakly correlated
234 ERVL47-int 1 * 74.0 Weakly correlated
235 HERV16-int 1 n.s 99.0 Highly correlated
236 HERV1_LTRa 1 *** 28.9 Weakly correlated
237 HERV35I-int 1 n.s 43.0 Weakly correlated
238 HERVIP10B3-int 1 n.s 28.9 Weakly correlated
239 HERVIP10F-int 1 n.s 28.9 Weakly correlated
240 HERVIP10FH-int 1 n.s 28.9 Weakly correlated
241 HERVK11-int 1 n.s 28.9 Weakly correlated
242 HERVK13-int 1 * 19.6 Weakly correlated
243 HERVK22-int 1 n.s 43.0 Weakly correlated
244 HERVKC4-int 1 * 28.9 Weakly correlated
245 HERVL40-int 1 n.s 99.0 Highly correlated
246 HUERS-P1-int 1 n.s 43.0 Weakly correlated
247 L1HS 1 n.s 8.6 Weakly correlated
248 L1M3a 1 n.s 99.0 Highly correlated
249 L1M3c 1 n.s 99.0 Highly correlated
250 L1M4a2 1 n.s 99.0 Highly correlated
251 L1M6B 1 * 99.0 Highly correlated
252 L1M8 1 n.s 99.0 Highly correlated
253 L1MEa 1 * 99.0 Highly correlated
254 L1P4b 1 * 74.0 Weakly correlated
255 L1PA12 1 n.s 74.0 Weakly correlated
256 L1PA15-16 1 n.s 74.0 Weakly correlated
257 L1PB2 1 n.s 74.0 Weakly correlated
258 L2-1_AMi 1 * 319.0 Weakly correlated
259 L4_A_Mam 1 n.s 99.0 Highly correlated
260 LTR103_Mam 1 * 99.0 Highly correlated
261 LTR104_Mam 1 n.s 99.0 Highly correlated
262 LTR106_Mam 1 * 99.0 Highly correlated
263 LTR10D 1 ** 28.9 Weakly correlated
264 LTR14B 1 * 28.9 Weakly correlated
265 LTR16A 1 n.s 99.0 Highly correlated
266 LTR16A1 1 n.s 99.0 Highly correlated
267 LTR16A2 1 n.s 99.0 Highly correlated
268 LTR16D 1 n.s 99.0 Highly correlated
269 LTR16D2 1 * 99.0 Highly correlated
270 LTR16E1 1 n.s 99.0 Highly correlated
271 LTR19C 1 ** 43.0 Weakly correlated
272 LTR1D 1 n.s 43.0 Weakly correlated
273 LTR21A 1 ** 28.9 Weakly correlated
274 LTR22B 1 ** 28.9 Weakly correlated
275 LTR22C0 1 ** 28.9 Weakly correlated
276 LTR22E 1 ** 28.9 Weakly correlated
277 LTR23 1 * 74.0 Weakly correlated
278 LTR27 1 ** 43.0 Weakly correlated
279 LTR2752 1 n.s 43.0 Weakly correlated
280 LTR27D 1 * 43.0 Weakly correlated
281 LTR27E 1 * 43.0 Weakly correlated
282 LTR29 1 n.s 43.0 Weakly correlated
283 LTR33C 1 n.s 99.0 Highly correlated
284 LTR35B 1 ** 43.0 Weakly correlated
285 LTR36 1 * 74.0 Weakly correlated
286 LTR37A 1 n.s 99.0 Highly correlated
287 LTR39-int 1 ** 43.0 Weakly correlated
288 LTR40a 1 n.s 99.0 Highly correlated
289 LTR40c 1 n.s 99.0 Highly correlated
290 LTR41 1 n.s 99.0 Highly correlated
291 LTR41B 1 n.s 99.0 Highly correlated
292 LTR41C 1 n.s 99.0 Highly correlated
293 LTR43 1 * 74.0 Weakly correlated
294 LTR45 1 ** 99.0 Highly correlated
295 LTR46 1 ** 43.0 Weakly correlated
296 LTR49-int 1 n.s 74.0 Weakly correlated
297 LTR5_Hs 1 n.s 0.0 Weakly correlated
298 LTR67B 1 n.s 99.0 Highly correlated
299 LTR71B 1 * 43.0 Weakly correlated
300 LTR75B 1 ** 99.0 Highly correlated
301 LTR76 1 * 74.0 Weakly correlated
302 LTR83 1 * 99.0 Highly correlated
303 LTR85a 1 n.s 99.0 Highly correlated
304 LTR88a 1 * 99.0 Highly correlated
305 LTR9D 1 n.s 43.0 Weakly correlated
306 MER110-int 1 * 99.0 Highly correlated
307 MER11B 1 n.s 19.6 Weakly correlated
308 MER11C 1 n.s 19.6 Weakly correlated
309 MER21B 1 n.s 99.0 Highly correlated
310 MER21C 1 n.s 99.0 Highly correlated
311 MER34 1 n.s 87.0 Weakly correlated
312 MER34C2 1 * 74.0 Weakly correlated
313 MER39 1 n.s 74.0 Weakly correlated
314 MER39B 1 n.s 74.0 Weakly correlated
315 MER41-int 1 n.s 74.0 Weakly correlated
316 MER41D 1 * 74.0 Weakly correlated
317 MER41E 1 * 74.0 Weakly correlated
318 MER4A 1 n.s 74.0 Weakly correlated
319 MER4A1_ 1 n.s 74.0 Weakly correlated
320 MER51A 1 n.s 43.0 Weakly correlated
321 MER51D 1 ** 43.0 Weakly correlated
322 MER51E 1 ** 43.0 Weakly correlated
323 MER52A 1 n.s 74.0 Weakly correlated
324 MER57B1 1 n.s 43.0 Weakly correlated
325 MER57C2 1 * 87.0 Weakly correlated
326 MER57D 1 * 87.0 Weakly correlated
327 MER61F 1 ** 43.0 Weakly correlated
328 MER65-int 1 n.s 87.0 Weakly correlated
329 MER66-int 1 n.s 43.0 Weakly correlated
330 MER66B 1 n.s 43.0 Weakly correlated
331 MER68 1 n.s 99.0 Highly correlated
332 MER72 1 n.s 43.0 Weakly correlated
333 MER72B 1 ** 43.0 Weakly correlated
334 MER74A 1 n.s 99.0 Highly correlated
335 MER76 1 n.s 99.0 Highly correlated
336 MER77 1 n.s 99.0 Highly correlated
337 MER77B 1 n.s 99.0 Highly correlated
338 MER83 1 * 43.0 Weakly correlated
339 MER84 1 * 43.0 Weakly correlated
340 MER89 1 n.s 99.0 Highly correlated
341 MER90 1 n.s 99.0 Highly correlated
342 MER92D 1 ** 99.0 Highly correlated
343 MLT-int 1 * 99.0 Highly correlated
344 MLT1C-int 1 n.s 94.0 Weakly correlated
345 MLT1E3 1 n.s 99.0 Highly correlated
346 MLT1F1 1 n.s 99.0 Highly correlated
347 MLT1G1 1 n.s 99.0 Highly correlated
348 MLT1G3 1 n.s 99.0 Highly correlated
349 MLT1H-int 1 n.s 99.0 Highly correlated
350 MLT1H1 1 n.s 99.0 Highly correlated
351 MLT1H1-int 1 * 99.0 Highly correlated
352 MLT1I-int 1 n.s 99.0 Highly correlated
353 MLT1J-int 1 n.s 99.0 Highly correlated
354 MLT1O 1 n.s 99.0 Highly correlated
355 MLT2B2 1 n.s 99.0 Highly correlated
356 MLT2F 1 n.s 99.0 Highly correlated
357 MSTC-int 1 * 74.0 Weakly correlated
358 MamGypLTR1d 1 * 99.0 Highly correlated
359 MamGypLTR3 1 * 99.0 Highly correlated
360 MamGypLTR3a 1 n.s 99.0 Highly correlated
361 MamGypsy2-I 1 n.s 99.0 Highly correlated
362 SVA_A 1 n.s 19.6 Weakly correlated
363 SVA_D 1 n.s 15.2 Weakly correlated
364 THE1A 1 n.s 43.0 Weakly correlated
365 THE1C 1 n.s 43.0 Weakly correlated
366 X6A_LINE 1 * 99.0 Highly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 68 n.s 99.0 Highly correlated
2 AluJb 48 n.s 74.0 Weakly correlated
3 L1MEg 41 **** 99.0 Highly correlated
4 L2 38 * 99.0 Highly correlated
5 HAL1 36 **** 99.0 Highly correlated
6 L1MEc 34 **** 99.0 Highly correlated
7 L2c 33 n.s 99.0 Highly correlated
8 L1MA4 29 **** 87.0 Weakly correlated
9 L2b 29 n.s 99.0 Highly correlated
10 AluSx 27 n.s 74.0 Weakly correlated
11 L1ME1 26 n.s 99.0 Highly correlated
12 AluJr 24 n.s 74.0 Weakly correlated
13 L1MA8 22 *** 87.0 Weakly correlated
14 AluSz 22 n.s 74.0 Weakly correlated
15 MIR 22 n.s 99.0 Highly correlated
16 AluJo 20 n.s 74.0 Weakly correlated
17 L1M5 20 n.s 99.0 Highly correlated
18 L1M2 19 ** 99.0 Highly correlated
19 AluSx1 19 n.s 74.0 Weakly correlated
20 L1MEf 19 * 99.0 Highly correlated
21 L1M4 19 n.s 99.0 Highly correlated
22 L1MDa 17 ** 99.0 Highly correlated
23 L1MEd 16 n.s 99.0 Highly correlated
24 MIRb 15 n.s 99.0 Highly correlated
25 AluSz6 15 n.s 74.0 Weakly correlated
26 AluSp 14 n.s 74.0 Weakly correlated
27 L1MA9 14 n.s 99.0 Highly correlated
28 AluY 13 n.s 74.0 Weakly correlated
29 L1MCa 13 * 99.0 Highly correlated
30 L1ME3A 13 n.s 99.0 Highly correlated
31 L1M1 12 n.s 74.0 Weakly correlated
32 L1MD1 12 * 99.0 Highly correlated
33 L1MA7 11 n.s 87.0 Weakly correlated
34 L1MC3 11 n.s 99.0 Highly correlated
35 L1MC1 11 n.s 99.0 Highly correlated
36 L1MB3 11 n.s 99.0 Highly correlated
37 L1MC4 10 n.s 99.0 Highly correlated
38 L1MB2 10 n.s 99.0 Highly correlated
39 L1M4c 10 ** 99.0 Highly correlated
40 L1MB1 10 * 99.0 Highly correlated
41 MER11A 10 **** 28.9 Weakly correlated
42 L1MB7 10 n.s 99.0 Highly correlated
43 L1PB1 9 n.s 74.0 Weakly correlated
44 L1MD2 9 n.s 99.0 Highly correlated
45 L1M3 9 * 99.0 Highly correlated
46 L1PA16 9 n.s 74.0 Weakly correlated
47 L1MA6 9 n.s 87.0 Weakly correlated
48 AluSq 8 n.s 74.0 Weakly correlated
49 LTR33 8 * 99.0 Highly correlated
50 L1MB8 8 n.s 99.0 Highly correlated
51 L1MA3 8 n.s 74.0 Weakly correlated
52 L3 8 n.s 99.0 Highly correlated
53 AluSq2 7 n.s 74.0 Weakly correlated
54 L1PA7 7 n.s 74.0 Weakly correlated
55 L1MB5 7 n.s 99.0 Highly correlated
56 AluSg 7 n.s 74.0 Weakly correlated
57 L1MA2 7 n.s 74.0 Weakly correlated
58 MIR3 7 n.s 99.0 Highly correlated
59 L1MA5 7 n.s 87.0 Weakly correlated
60 MLT1K 7 n.s 99.0 Highly correlated
61 HAL1ME 6 n.s 99.0 Highly correlated
62 L1PA15 6 n.s 74.0 Weakly correlated
63 L1ME3 6 n.s 99.0 Highly correlated
64 MIRc 6 n.s 99.0 Highly correlated
65 L1MD3 6 n.s 99.0 Highly correlated
66 L1ME4a 6 n.s 99.0 Highly correlated
67 L1MCb 5 * 99.0 Highly correlated
68 L1PREC2 5 n.s 43.0 Weakly correlated
69 L1M4b 5 n.s 99.0 Highly correlated
70 L1MD 5 n.s 99.0 Highly correlated
71 L1MB4 5 n.s 99.0 Highly correlated
72 FLAM_C 5 n.s 74.0 Weakly correlated
73 FAM 5 ** 87.0 Weakly correlated
74 L1MA4A 5 n.s 87.0 Weakly correlated
75 L1PA11 5 n.s 74.0 Weakly correlated
76 AluSx3 4 n.s 74.0 Weakly correlated
77 L1ME3Cz 4 n.s 99.0 Highly correlated
78 L1MEi 4 n.s 99.0 Highly correlated
79 L1PA3 4 n.s 19.6 Weakly correlated
80 MLT1H 4 n.s 99.0 Highly correlated
81 L1MC5 4 n.s 99.0 Highly correlated
82 L1PA10 4 n.s 74.0 Weakly correlated
83 L1PA6 4 n.s 28.9 Weakly correlated
84 L1M7 4 n.s 99.0 Highly correlated
85 MLT1J 4 n.s 99.0 Highly correlated
86 AluSx4 4 n.s 74.0 Weakly correlated
87 L1MC2 4 n.s 99.0 Highly correlated
88 MER57A-int 4 * 43.0 Weakly correlated
89 L1ME3B 4 n.s 99.0 Highly correlated
90 L1M6 4 n.s 99.0 Highly correlated
91 L1MC5a 4 n.s 99.0 Highly correlated
92 MLT1J1 4 * 99.0 Highly correlated
93 L1ME2 4 n.s 99.0 Highly correlated
94 L1MEb 4 ** 99.0 Highly correlated
95 L1PA5 4 n.s 19.6 Weakly correlated
96 AluSc 3 n.s 74.0 Weakly correlated
97 L1P2 3 n.s 28.9 Weakly correlated
98 MER57-int 3 n.s 87.0 Weakly correlated
99 MLT1C 3 n.s 94.0 Weakly correlated
100 MLT1J2 3 n.s 99.0 Highly correlated
101 HAL1M8 3 n.s 99.0 Highly correlated
102 L2-3_Crp 3 ** 431.0 Weakly correlated
103 L1PA13 3 n.s 74.0 Weakly correlated
104 MLT1D 3 n.s 99.0 Highly correlated
105 MLT1A0 3 n.s 99.0 Highly correlated
106 L1PA17 3 n.s 74.0 Weakly correlated
107 L1PA4 3 n.s 19.6 Weakly correlated
108 LTR5B 3 ** 28.9 Weakly correlated
109 L1PBa 3 n.s 74.0 Weakly correlated
110 Alu 2 * 74.0 Weakly correlated
111 AluYe5 2 * 74.0 Weakly correlated
112 HERVL-int 2 n.s 74.0 Weakly correlated
113 L1PB4 2 n.s 99.0 Highly correlated
114 LTR25 2 ** 43.0 Weakly correlated
115 LTR25-int 2 n.s 43.0 Weakly correlated
116 LTR60B 2 *** 74.0 Weakly correlated
117 MER41A 2 n.s 74.0 Weakly correlated
118 MER57A1 2 * 43.0 Weakly correlated
119 MLT1H2 2 n.s 99.0 Highly correlated
120 ERVL-B4-int 2 n.s 99.0 Highly correlated
121 L1MA10 2 n.s 99.0 Highly correlated
122 L1MC4a 2 n.s 99.0 Highly correlated
123 L1MEh 2 n.s 99.0 Highly correlated
124 MER51-int 2 * 43.0 Weakly correlated
125 AluYh3 2 n.s 15.2 Weakly correlated
126 ERV3-16A3_I-int 2 n.s 99.0 Highly correlated
127 ERVL-E-int 2 n.s 99.0 Highly correlated
128 L1MA1 2 n.s 74.0 Weakly correlated
129 THE1D-int 2 n.s 28.9 Weakly correlated
130 AluSg4 2 n.s 74.0 Weakly correlated
131 AluSq4 2 n.s 74.0 Weakly correlated
132 L1M3b 2 n.s 99.0 Highly correlated
133 L1MCc 2 n.s 99.0 Highly correlated
134 L1PB3 2 n.s 74.0 Weakly correlated
135 L1PBa1 2 n.s 74.0 Weakly correlated
136 LTR78 2 n.s 99.0 Highly correlated
137 LTR79 2 n.s 99.0 Highly correlated
138 MER4-int 2 n.s 74.0 Weakly correlated
139 AluSc8 2 n.s 74.0 Weakly correlated
140 LOR1-int 2 n.s 74.0 Weakly correlated
141 MLT1F 2 n.s 99.0 Highly correlated
142 MSTB 2 n.s 43.0 Weakly correlated
143 L1M2c 2 * 87.0 Weakly correlated
144 L1M3e 2 n.s 99.0 Highly correlated
145 L1M4a1 2 n.s 99.0 Highly correlated
146 L3b 2 n.s 99.0 Highly correlated
147 MLT1A 2 n.s 99.0 Highly correlated
148 MamRTE1 2 n.s 99.0 Highly correlated
149 AluJr4 2 n.s 74.0 Weakly correlated
150 L1ME3E 2 n.s 99.0 Highly correlated
151 L1PA8 2 n.s 74.0 Weakly correlated
152 LTR85b 2 * 99.0 Highly correlated
153 MLT1E2 2 n.s 99.0 Highly correlated
154 MamRep605 2 n.s 99.0 Highly correlated
155 FRAM 1 n.s 74.0 Weakly correlated
156 HERVK-int 1 n.s 28.9 Weakly correlated
157 HUERS-P3-int 1 n.s 43.0 Weakly correlated
158 L1M3a 1 n.s 99.0 Highly correlated
159 L1ME5 1 n.s 99.0 Highly correlated
160 LTR75B 1 ** 99.0 Highly correlated
161 MER41E 1 * 74.0 Weakly correlated
162 MER77 1 n.s 99.0 Highly correlated
163 MLT1B 1 n.s 99.0 Highly correlated
164 MamGypsy2-I 1 n.s 99.0 Highly correlated
165 HERVKC4-int 1 * 28.9 Weakly correlated
166 L1PBb 1 n.s 74.0 Weakly correlated
167 LTR2752 1 n.s 43.0 Weakly correlated
168 MER4B-int 1 n.s 99.0 Highly correlated
169 MER57B1 1 n.s 43.0 Weakly correlated
170 MER57D 1 * 87.0 Weakly correlated
171 MER68 1 n.s 99.0 Highly correlated
172 MLT1F2 1 n.s 99.0 Highly correlated
173 MLT1H-int 1 n.s 99.0 Highly correlated
174 MLT1N2 1 n.s 99.0 Highly correlated
175 AluYg6 1 * 15.2 Weakly correlated
176 L1MA5A 1 n.s 87.0 Weakly correlated
177 L1P4a 1 n.s 74.0 Weakly correlated
178 L1PA2 1 n.s 15.2 Weakly correlated
179 L1PA8A 1 n.s 74.0 Weakly correlated
180 LTR16D2 1 * 99.0 Highly correlated
181 LTR1D 1 n.s 43.0 Weakly correlated
182 LTR22B 1 ** 28.9 Weakly correlated
183 LTR48B 1 n.s 74.0 Weakly correlated
184 LTR50 1 n.s 99.0 Highly correlated
185 LTR76 1 * 74.0 Weakly correlated
186 MER110-int 1 * 99.0 Highly correlated
187 MER21C 1 n.s 99.0 Highly correlated
188 MER83 1 * 43.0 Weakly correlated
189 MER89 1 n.s 99.0 Highly correlated
190 MamGypLTR3 1 * 99.0 Highly correlated
191 AluYj4 1 n.s 0.0 Weakly correlated
192 L1MDb 1 n.s 99.0 Highly correlated
193 L1MEa 1 * 99.0 Highly correlated
194 L1PA14 1 n.s 74.0 Weakly correlated
195 L2-1_AMi 1 * 319.0 Weakly correlated
196 LTR16 1 n.s 99.0 Highly correlated
197 LTR41B 1 n.s 99.0 Highly correlated
198 MER11B 1 n.s 19.6 Weakly correlated
199 MER57C2 1 * 87.0 Weakly correlated
200 MLT1O 1 n.s 99.0 Highly correlated
201 MamSINE1 1 n.s 99.0 Highly correlated
202 THE1B 1 n.s 43.0 Weakly correlated
203 AluSc5 1 n.s 74.0 Weakly correlated
204 CR1_Mam 1 n.s 99.0 Highly correlated
205 HAL1b 1 n.s 99.0 Highly correlated
206 L4_C_Mam 1 n.s 99.0 Highly correlated
207 LTR16A2 1 n.s 99.0 Highly correlated
208 LTR41C 1 n.s 99.0 Highly correlated
209 LTR49-int 1 n.s 74.0 Weakly correlated
210 LTR83 1 * 99.0 Highly correlated
211 LTR88a 1 * 99.0 Highly correlated
212 MER11C 1 n.s 19.6 Weakly correlated
213 MER41-int 1 n.s 74.0 Weakly correlated
214 MER51A 1 n.s 43.0 Weakly correlated
215 MER51E 1 ** 43.0 Weakly correlated
216 MLT1I 1 n.s 99.0 Highly correlated
217 MLT1L 1 n.s 99.0 Highly correlated
218 MSTB1 1 n.s 74.0 Weakly correlated
219 AluYm1 1 n.s 19.6 Weakly correlated
220 HERVK11-int 1 n.s 28.9 Weakly correlated
221 L1ME3C 1 n.s 99.0 Highly correlated
222 L1ME4b 1 n.s 99.0 Highly correlated
223 LFSINE_Vert 1 n.s 319.0 Weakly correlated
224 LTR16E1 1 n.s 99.0 Highly correlated
225 LTR85a 1 n.s 99.0 Highly correlated
226 MER72 1 n.s 43.0 Weakly correlated
227 MLT1G 1 n.s 99.0 Highly correlated
228 X7A_LINE 1 * 319.0 Weakly correlated
229 ERVL47-int 1 * 74.0 Weakly correlated
230 HERVK22-int 1 n.s 43.0 Weakly correlated
231 L1P4 1 n.s 74.0 Weakly correlated
232 LTR106_Mam 1 * 99.0 Highly correlated
233 LTR10D 1 ** 28.9 Weakly correlated
234 LTR14B 1 * 28.9 Weakly correlated
235 LTR21A 1 ** 28.9 Weakly correlated
236 LTR35B 1 ** 43.0 Weakly correlated
237 LTR39-int 1 ** 43.0 Weakly correlated
238 LTR41 1 n.s 99.0 Highly correlated
239 LTR84a 1 * 99.0 Highly correlated
240 MER50 1 n.s 43.0 Weakly correlated
241 MER51D 1 ** 43.0 Weakly correlated
242 MER89-int 1 n.s 99.0 Highly correlated
243 AmnSINE1 1 n.s 319.0 Weakly correlated
244 L1P1 1 n.s 19.6 Weakly correlated
245 L1P4b 1 * 74.0 Weakly correlated
246 LTR16A1 1 n.s 99.0 Highly correlated
247 LTR16D 1 n.s 99.0 Highly correlated
248 LTR17 1 n.s 28.9 Weakly correlated
249 LTR37A 1 n.s 99.0 Highly correlated
250 MER72B 1 ** 43.0 Weakly correlated
251 MER90a 1 n.s 99.0 Highly correlated
252 MamGypLTR1d 1 * 99.0 Highly correlated
253 Plat_L3 1 n.s 99.0 Highly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUJR 74.0 Weakly correlated
2 ALUSG 74.0 Weakly correlated
3 ALUSZ 74.0 Weakly correlated
4 L1M1 74.0 Weakly correlated
5 L1M4 99.0 Highly correlated
6 L1MC3 99.0 Highly correlated
7 MER11A 28.9 Weakly correlated