ZRdb KZFP & Repeats
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Human_ZNF471

  • Protein
    Zinc finger protein 471
  • Length
    626
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    94.0 Mya
  • Uniprot_ID
    Q9BX82
  • NCBI_ID
    57573
Sequence:
MNVEVVKVMPQDLVTFKDVAIDFSQEEWQWMNPAQKRLYRSMMLENYQSLVSLGLCISKPYVISLLEQGREPWEMTSEMTRSPFSDWESIYVTQELPLKQFMYDDACMEGITSYGLECSTFEENWKWEDLFEKQMGSHEMFSKKEIITHKETITKETEFKYTKFGKCIHLENIEESIYNHTSDKKSFSKNSMVIKHKKVYVGKKLFKCNECDKTFTHSSSLTVHFRIHTGEKPYACEECGKAFKQRQHLAQHHRTHTGEKLFECKECRKAFKQSEHLIQHQRIHTGEKPYKCKECRKAFRQPAHLAQHQRIHTGEKPYECKECGKAFSDGSSFARHQRCHTGKRPYECIECGKAFRYNTSFIRHWRSYHTGEKPFNCIDCGKAFSVHIGLILHRRIHTGEKPYKCGVCGKTFSSGSSRTVHQRIHTGEKPYECDICGKDFSHHASLTQHQRVHSGEKPYECKECGKAFRQNVHLVSHLRIHTGEKPYECKECGKAFRISSQLATHQRIHTGEKPYECIECGNAFKQRSHLAQHQKTHTGEKPYECNECGKAFSQTSNLTQHQRIHTGEKPYKCTECGKAFSDSSSCAQHQRLHTGQRPYQCFECGKAFRRKLSLICHQRSHTGEEP
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 14..85
2 C2h2 206..228
3 C2h2 234..256
4 C2h2 262..284
5 C2h2 290..312
6 C2h2 318..340
7 C2h2 346..369
8 C2h2 375..397
9 C2h2 403..425
10 C2h2 431..453
11 C2h2 459..481
12 C2h2 487..509
13 C2h2 515..537
14 C2h2 543..565
15 C2h2 571..593
16 C2h2 599..621
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1M1 313 **** 74.0 Weakly correlated
2 L1MA9 119 **** 99.0 Moderately correlated
3 L1MA2 111 **** 74.0 Weakly correlated
4 L1M3c 108 **** 99.0 Moderately correlated
5 L1M2 106 **** 99.0 Moderately correlated
6 L1MA3 99 **** 74.0 Weakly correlated
7 L1M3e 73 **** 99.0 Moderately correlated
8 L1MA8 72 **** 87.0 Weakly correlated
9 L2a 67 n.s 99.0 Moderately correlated
10 L1MA1 65 **** 74.0 Weakly correlated
11 AluJb 61 n.s 74.0 Weakly correlated
12 L1PB1 59 **** 74.0 Weakly correlated
13 L1MA5 55 **** 87.0 Weakly correlated
14 L1M4 50 **** 99.0 Moderately correlated
15 AluSx 49 n.s 74.0 Weakly correlated
16 L1MA4 45 **** 87.0 Weakly correlated
17 L1M2a 44 **** 87.0 Weakly correlated
18 MIRb 44 n.s 99.0 Moderately correlated
19 AluY 41 n.s 74.0 Weakly correlated
20 MIR 41 n.s 99.0 Moderately correlated
21 AluSx1 39 n.s 74.0 Weakly correlated
22 AluSz 37 n.s 74.0 Weakly correlated
23 L1ME1 37 * 99.0 Moderately correlated
24 L1MB1 33 **** 99.0 Moderately correlated
25 L1MA7 32 **** 87.0 Weakly correlated
26 L1MA6 31 **** 87.0 Weakly correlated
27 L1PBa 31 **** 74.0 Weakly correlated
28 AluJr 30 n.s 74.0 Weakly correlated
29 L1M3de 30 **** 99.0 Moderately correlated
30 L2 30 n.s 99.0 Moderately correlated
31 L1MB7 29 ** 99.0 Moderately correlated
32 L2c 29 n.s 99.0 Moderately correlated
33 L1M3b 27 **** 99.0 Moderately correlated
34 L1M4c 27 **** 99.0 Moderately correlated
35 AluJo 24 n.s 74.0 Weakly correlated
36 L1M3a 24 **** 99.0 Moderately correlated
37 L1MEd 24 ** 99.0 Moderately correlated
38 L1MA4A 23 **** 87.0 Weakly correlated
39 L1PA15 23 ** 74.0 Weakly correlated
40 AluSq2 22 n.s 74.0 Weakly correlated
41 HAL1 22 * 99.0 Moderately correlated
42 L1PA7 22 n.s 74.0 Weakly correlated
43 L1M2c 21 **** 87.0 Weakly correlated
44 L1MB8 21 ** 99.0 Moderately correlated
45 L1MEc 21 n.s 99.0 Moderately correlated
46 L2b 21 n.s 99.0 Moderately correlated
47 L1PA5 20 n.s 19.6 Weakly correlated
48 MIR3 20 n.s 99.0 Moderately correlated
49 L1PB3 19 **** 74.0 Weakly correlated
50 L1MEg 18 ** 99.0 Moderately correlated
51 AluSc 17 n.s 74.0 Weakly correlated
52 AluSp 17 n.s 74.0 Weakly correlated
53 MIRc 17 n.s 99.0 Moderately correlated
54 AluSc8 16 n.s 74.0 Weakly correlated
55 AluSz6 16 n.s 74.0 Weakly correlated
56 L1M4b 16 **** 99.0 Moderately correlated
57 L1MA10 16 **** 99.0 Moderately correlated
58 L1M5 15 n.s 99.0 Moderately correlated
59 L1MB2 14 ** 99.0 Moderately correlated
60 L1ME4a 14 n.s 99.0 Moderately correlated
61 L1PA17 14 *** 74.0 Weakly correlated
62 L1PB4 14 ** 99.0 Moderately correlated
63 AluSx3 13 n.s 74.0 Weakly correlated
64 L1MDa 13 * 99.0 Moderately correlated
65 L1P4 13 **** 74.0 Weakly correlated
66 L1PBa1 13 **** 74.0 Weakly correlated
67 FLAM_C 12 ** 74.0 Weakly correlated
68 L1M3 12 *** 99.0 Moderately correlated
69 L1MEf 12 n.s 99.0 Moderately correlated
70 L1MEi 12 **** 99.0 Moderately correlated
71 L1P3 12 ** 74.0 Weakly correlated
72 L3 12 n.s 99.0 Moderately correlated
73 AluSg 11 n.s 74.0 Weakly correlated
74 L1M3d 11 **** 99.0 Moderately correlated
75 L1MA5A 11 *** 87.0 Weakly correlated
76 L1ME2 11 n.s 99.0 Moderately correlated
77 L1ME4c 11 *** 99.0 Moderately correlated
78 L1PA16 11 n.s 74.0 Weakly correlated
79 L1PA6 11 n.s 28.9 Weakly correlated
80 L1MC4 10 n.s 99.0 Moderately correlated
81 L1MC5 10 n.s 99.0 Moderately correlated
82 L1MD2 10 n.s 99.0 Moderately correlated
83 L1PA13 10 n.s 74.0 Weakly correlated
84 L1M4a2 9 **** 99.0 Moderately correlated
85 L1ME3G 9 n.s 99.0 Moderately correlated
86 L1PA8 9 n.s 74.0 Weakly correlated
87 THE1B 9 n.s 43.0 Weakly correlated
88 AluJr4 8 n.s 74.0 Weakly correlated
89 L1MB3 8 n.s 99.0 Moderately correlated
90 L1MB5 8 n.s 99.0 Moderately correlated
91 L1MC3 8 n.s 99.0 Moderately correlated
92 L1PA4 8 n.s 19.6 Weakly correlated
93 MLT1C 8 n.s 94.0 Highly correlated
94 AluSg4 7 * 74.0 Weakly correlated
95 FLAM_A 7 * 74.0 Weakly correlated
96 L1M3f 7 **** 87.0 Weakly correlated
97 L1MC1 7 n.s 99.0 Moderately correlated
98 L1MD 7 n.s 99.0 Moderately correlated
99 L1ME3A 7 n.s 99.0 Moderately correlated
100 LTR8 7 ** 43.0 Weakly correlated
101 MLT1D 7 n.s 99.0 Moderately correlated
102 AluSq 6 n.s 74.0 Weakly correlated
103 HAL1ME 6 n.s 99.0 Moderately correlated
104 L1M4a1 6 ** 99.0 Moderately correlated
105 L1ME3B 6 n.s 99.0 Moderately correlated
106 L1ME3Cz 6 n.s 99.0 Moderately correlated
107 L1PA2 6 n.s 15.2 Weakly correlated
108 L1PA3 6 n.s 19.6 Weakly correlated
109 MLT1J 6 n.s 99.0 Moderately correlated
110 THE1D 6 n.s 43.0 Weakly correlated
111 AluYa5 5 * 15.2 Weakly correlated
112 AluYb8 5 ** 15.2 Weakly correlated
113 AluYj4 5 ** 0.0 Weakly correlated
114 L1M7 5 * 99.0 Moderately correlated
115 L1MB4 5 n.s 99.0 Moderately correlated
116 L1MC5a 5 n.s 99.0 Moderately correlated
117 L1MCa 5 n.s 99.0 Moderately correlated
118 L1PA8A 5 n.s 74.0 Weakly correlated
119 MER31B 5 *** 99.0 Moderately correlated
120 MLT1H 5 n.s 99.0 Moderately correlated
121 MSTA 5 n.s 43.0 Weakly correlated
122 MSTA-int 5 n.s 43.0 Weakly correlated
123 AluSc5 4 n.s 74.0 Weakly correlated
124 L1MC2 4 n.s 99.0 Moderately correlated
125 L1MC4a 4 n.s 99.0 Moderately correlated
126 L1ME4b 4 n.s 99.0 Moderately correlated
127 L1PA10 4 n.s 74.0 Weakly correlated
128 L1PA14 4 n.s 74.0 Weakly correlated
129 L1PA15-16 4 n.s 74.0 Weakly correlated
130 L4_A_Mam 4 n.s 99.0 Moderately correlated
131 LTR10A 4 **** 28.9 Weakly correlated
132 LTR33 4 n.s 99.0 Moderately correlated
133 MER21B 4 n.s 99.0 Moderately correlated
134 MLT1F 4 n.s 99.0 Moderately correlated
135 MLT1L 4 n.s 99.0 Moderately correlated
136 MSTB 4 n.s 43.0 Weakly correlated
137 ERV3-16A3_I-int 3 n.s 99.0 Moderately correlated
138 ERVL-E-int 3 n.s 99.0 Moderately correlated
139 FRAM 3 n.s 74.0 Weakly correlated
140 HAL1b 3 n.s 99.0 Moderately correlated
141 HERVL-int 3 n.s 74.0 Weakly correlated
142 L1MCc 3 n.s 99.0 Moderately correlated
143 L1ME2z 3 n.s 99.0 Moderately correlated
144 L1PA11 3 n.s 74.0 Weakly correlated
145 L1PA12 3 n.s 74.0 Weakly correlated
146 L1PB2 3 n.s 74.0 Weakly correlated
147 L1PREC2 3 n.s 43.0 Weakly correlated
148 LTR1 3 *** 43.0 Weakly correlated
149 LTR16A 3 n.s 99.0 Moderately correlated
150 LTR16C 3 n.s 99.0 Moderately correlated
151 LTR33A 3 * 99.0 Moderately correlated
152 LTR33C 3 *** 99.0 Moderately correlated
153 LTR39 3 * 43.0 Weakly correlated
154 MER39 3 n.s 74.0 Weakly correlated
155 MLT1A 3 n.s 99.0 Moderately correlated
156 MLT1A0 3 n.s 99.0 Moderately correlated
157 MLT1B 3 n.s 99.0 Moderately correlated
158 MLT1E 3 ** 99.0 Moderately correlated
159 MLT1F2 3 n.s 99.0 Moderately correlated
160 MLT1K 3 n.s 99.0 Moderately correlated
161 MLT1N2 3 n.s 99.0 Moderately correlated
162 MLT2B1 3 n.s 99.0 Moderately correlated
163 THE1C 3 n.s 43.0 Weakly correlated
164 AluYk11 2 *** 15.2 Weakly correlated
165 ERVL-B4-int 2 n.s 99.0 Moderately correlated
166 HERV17-int 2 n.s 28.9 Weakly correlated
167 HERVIP10FH-int 2 * 28.9 Weakly correlated
168 L1HS 2 n.s 8.6 Weakly correlated
169 L1M6 2 n.s 99.0 Moderately correlated
170 L1MC 2 n.s 99.0 Moderately correlated
171 L1MD1 2 n.s 99.0 Moderately correlated
172 L1MD3 2 n.s 99.0 Moderately correlated
173 L1ME3C 2 n.s 99.0 Moderately correlated
174 L1ME5 2 n.s 99.0 Moderately correlated
175 L1MEh 2 n.s 99.0 Moderately correlated
176 L1MEj 2 n.s 99.0 Moderately correlated
177 L1P1 2 n.s 19.6 Weakly correlated
178 L1P2 2 n.s 28.9 Weakly correlated
179 L1P4a 2 n.s 74.0 Weakly correlated
180 L1PB 2 n.s 74.0 Weakly correlated
181 L1PBb 2 * 74.0 Weakly correlated
182 L3b 2 n.s 99.0 Moderately correlated
183 LTR16A2 2 n.s 99.0 Moderately correlated
184 LTR40a 2 n.s 99.0 Moderately correlated
185 LTR7 2 n.s 19.6 Weakly correlated
186 LTR78 2 n.s 99.0 Moderately correlated
187 LTR81B 2 * 99.0 Moderately correlated
188 LTR84b 2 * 99.0 Moderately correlated
189 LTR88b 2 * 99.0 Moderately correlated
190 MER31A 2 * 87.0 Weakly correlated
191 MER4-int 2 n.s 74.0 Weakly correlated
192 MLT1B-int 2 ** 99.0 Moderately correlated
193 MLT1E2 2 n.s 99.0 Moderately correlated
194 MLT1E3 2 n.s 99.0 Moderately correlated
195 MLT1H1 2 n.s 99.0 Moderately correlated
196 MLT1I 2 n.s 99.0 Moderately correlated
197 MLT1J2 2 n.s 99.0 Moderately correlated
198 MLT1O 2 n.s 99.0 Moderately correlated
199 MLT2A1 2 n.s 74.0 Weakly correlated
200 MLT2B3 2 n.s 99.0 Moderately correlated
201 MSTB-int 2 n.s 43.0 Weakly correlated
202 MSTD 2 n.s 74.0 Weakly correlated
203 MamGyp-int 2 ** 99.0 Moderately correlated
204 MamRTE1 2 n.s 99.0 Moderately correlated
205 Plat_L3 2 n.s 99.0 Moderately correlated
206 SVA_F 2 n.s 0.0 Weakly correlated
207 THE1B-int 2 n.s 43.0 Weakly correlated
208 AluSg7 1 n.s 74.0 Weakly correlated
209 AluSq4 1 n.s 74.0 Weakly correlated
210 AluSx4 1 n.s 74.0 Weakly correlated
211 AluYb9 1 * 15.2 Weakly correlated
212 AluYc 1 n.s 74.0 Weakly correlated
213 AluYe5 1 n.s 74.0 Weakly correlated
214 AluYh3 1 n.s 15.2 Weakly correlated
215 AluYk4 1 n.s 15.2 Weakly correlated
216 AluYm1 1 n.s 19.6 Weakly correlated
217 AmnSINE1 1 n.s 319.0 Weakly correlated
218 CR1-3_Croc 1 * 319.0 Weakly correlated
219 FAM 1 n.s 87.0 Weakly correlated
220 HERV9NC-int 1 n.s 19.6 Weakly correlated
221 HERVH-int 1 n.s 28.9 Weakly correlated
222 HERVL40-int 1 n.s 99.0 Moderately correlated
223 HUERS-P3-int 1 n.s 43.0 Weakly correlated
224 L1M 1 ** 74.0 Weakly correlated
225 L1M2b 1 * 87.0 Weakly correlated
226 L1M6B 1 * 99.0 Moderately correlated
227 L1M8 1 n.s 99.0 Moderately correlated
228 L1MDb 1 n.s 99.0 Moderately correlated
229 L1ME3 1 n.s 99.0 Moderately correlated
230 L1ME3E 1 n.s 99.0 Moderately correlated
231 L1MEb 1 n.s 99.0 Moderately correlated
232 L1P4e 1 * 74.0 Weakly correlated
233 L1P5 1 * 74.0 Weakly correlated
234 L2-3_Crp 1 n.s 431.0 Weakly correlated
235 L5 1 * 99.0 Moderately correlated
236 LFSINE_Vert 1 n.s 319.0 Weakly correlated
237 LTR103b_Mam 1 * 99.0 Moderately correlated
238 LTR10B1 1 ** 28.9 Weakly correlated
239 LTR12E 1 * 19.6 Weakly correlated
240 LTR13 1 n.s 19.6 Weakly correlated
241 LTR16 1 n.s 99.0 Moderately correlated
242 LTR16A1 1 n.s 99.0 Moderately correlated
243 LTR16E2 1 n.s 99.0 Moderately correlated
244 LTR1B0 1 ** 43.0 Weakly correlated
245 LTR24C 1 * 74.0 Weakly correlated
246 LTR37A 1 n.s 99.0 Moderately correlated
247 LTR3A 1 ** 28.9 Weakly correlated
248 LTR41B 1 n.s 99.0 Moderately correlated
249 LTR47A2 1 ** 74.0 Weakly correlated
250 LTR48 1 n.s 74.0 Weakly correlated
251 LTR5A 1 n.s 19.6 Weakly correlated
252 LTR5_Hs 1 n.s 0.0 Weakly correlated
253 LTR60B 1 * 74.0 Weakly correlated
254 LTR62 1 * 74.0 Weakly correlated
255 LTR67B 1 n.s 99.0 Moderately correlated
256 LTR69 1 ** 99.0 Moderately correlated
257 LTR7B 1 n.s 28.9 Weakly correlated
258 LTR81 1 ** 99.0 Moderately correlated
259 LTR85a 1 n.s 99.0 Moderately correlated
260 LTR85c 1 n.s 99.0 Moderately correlated
261 LTR87 1 * 99.0 Moderately correlated
262 LTR89 1 n.s 99.0 Moderately correlated
263 MER101B 1 ** 87.0 Weakly correlated
264 MER110 1 * 99.0 Moderately correlated
265 MER21A 1 n.s 74.0 Weakly correlated
266 MER21C 1 n.s 99.0 Moderately correlated
267 MER31-int 1 n.s 99.0 Moderately correlated
268 MER41B 1 n.s 74.0 Weakly correlated
269 MER41C 1 n.s 74.0 Weakly correlated
270 MER41G 1 ** 74.0 Weakly correlated
271 MER4D 1 n.s 74.0 Weakly correlated
272 MER4D0 1 * 74.0 Weakly correlated
273 MER4D1 1 n.s 74.0 Weakly correlated
274 MER50 1 n.s 43.0 Weakly correlated
275 MER50B 1 n.s 43.0 Weakly correlated
276 MER52-int 1 n.s 99.0 Moderately correlated
277 MER54A 1 n.s 87.0 Weakly correlated
278 MER57-int 1 n.s 87.0 Weakly correlated
279 MER57A-int 1 n.s 43.0 Weakly correlated
280 MER57C1 1 ** 74.0 Weakly correlated
281 MER57E1 1 * 87.0 Weakly correlated
282 MER61-int 1 n.s 43.0 Weakly correlated
283 MER65A 1 n.s 74.0 Weakly correlated
284 MER68C 1 ** 99.0 Moderately correlated
285 MER76 1 n.s 99.0 Moderately correlated
286 MER83C 1 ** 43.0 Weakly correlated
287 MER84-int 1 * 74.0 Weakly correlated
288 MER87B 1 ** 74.0 Weakly correlated
289 MIR1_Amn 1 n.s 319.0 Weakly correlated
290 MLT1A1 1 n.s 87.0 Weakly correlated
291 MLT1D-int 1 n.s 99.0 Moderately correlated
292 MLT1E1A 1 n.s 99.0 Moderately correlated
293 MLT1E2-int 1 ** 99.0 Moderately correlated
294 MLT1G 1 n.s 99.0 Moderately correlated
295 MLT1G-int 1 ** 99.0 Moderately correlated
296 MLT1G1 1 n.s 99.0 Moderately correlated
297 MLT1G1-int 1 * 99.0 Moderately correlated
298 MLT1G3 1 n.s 99.0 Moderately correlated
299 MLT1J1 1 n.s 99.0 Moderately correlated
300 MLT1K-int 1 ** 99.0 Moderately correlated
301 MLT2A2 1 n.s 74.0 Weakly correlated
302 MLT2B2 1 n.s 99.0 Moderately correlated
303 MLT2C2 1 n.s 99.0 Moderately correlated
304 MLT2D 1 n.s 99.0 Moderately correlated
305 MSTB2 1 n.s 74.0 Weakly correlated
306 MSTC-int 1 * 74.0 Weakly correlated
307 MamGypLTR1b 1 n.s 99.0 Moderately correlated
308 MamGypLTR1c 1 n.s 99.0 Moderately correlated
309 MamGypsy2-I 1 n.s 99.0 Moderately correlated
310 MamRep605 1 n.s 99.0 Moderately correlated
311 MamSINE1 1 n.s 99.0 Moderately correlated
312 PABL_B 1 * 43.0 Weakly correlated
313 PRIMA41-int 1 n.s 74.0 Weakly correlated
314 PRIMAX-int 1 *** 74.0 Weakly correlated
315 Penelope1_Vert 1 * 319.0 Weakly correlated
316 SVA_C 1 n.s 15.2 Weakly correlated
317 SVA_D 1 n.s 15.2 Weakly correlated
318 SVA_E 1 n.s 0.0 Weakly correlated
319 THE1C-int 1 n.s 43.0 Weakly correlated
320 THE1D-int 1 n.s 28.9 Weakly correlated
321 UCON49 1 *** 0.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1M1 293 **** 74.0 Weakly correlated
2 L1MA2 107 **** 74.0 Weakly correlated
3 L1MA3 98 **** 74.0 Weakly correlated
4 L1M3c 93 **** 99.0 Moderately correlated
5 L1MA9 92 **** 99.0 Moderately correlated
6 L1M2 90 **** 99.0 Moderately correlated
7 L1MA1 67 **** 74.0 Weakly correlated
8 L1M3e 65 **** 99.0 Moderately correlated
9 L1MA8 59 **** 87.0 Weakly correlated
10 L1MA5 50 **** 87.0 Weakly correlated
11 L1PB1 45 **** 74.0 Weakly correlated
12 L1MA4 43 **** 87.0 Weakly correlated
13 L1M2a 39 **** 87.0 Weakly correlated
14 L1M4 30 *** 99.0 Moderately correlated
15 L1MA7 27 **** 87.0 Weakly correlated
16 L1PBa 26 **** 74.0 Weakly correlated
17 L1MA6 25 **** 87.0 Weakly correlated
18 L1M4c 25 **** 99.0 Moderately correlated
19 L1MB1 25 **** 99.0 Moderately correlated
20 L1M3de 24 **** 99.0 Moderately correlated
21 L1M3b 22 **** 99.0 Moderately correlated
22 L1M2c 18 **** 87.0 Weakly correlated
23 L1PB3 17 **** 74.0 Weakly correlated
24 L1ME1 16 n.s 99.0 Moderately correlated
25 L1MA10 14 **** 99.0 Moderately correlated
26 L1MB2 14 ** 99.0 Moderately correlated
27 L2a 14 n.s 99.0 Moderately correlated
28 L1MA4A 14 * 87.0 Weakly correlated
29 L1M3a 13 **** 99.0 Moderately correlated
30 MIRb 12 n.s 99.0 Moderately correlated
31 L1MB7 12 n.s 99.0 Moderately correlated
32 L1PBa1 12 **** 74.0 Weakly correlated
33 L1PA15 11 n.s 74.0 Weakly correlated
34 L1M4b 11 ** 99.0 Moderately correlated
35 L1PA17 11 * 74.0 Weakly correlated
36 L1MEi 10 *** 99.0 Moderately correlated
37 L1MEf 10 n.s 99.0 Moderately correlated
38 L2 10 n.s 99.0 Moderately correlated
39 HAL1 10 n.s 99.0 Moderately correlated
40 L1MA5A 9 ** 87.0 Weakly correlated
41 L1PA16 9 n.s 74.0 Weakly correlated
42 L1M3d 9 **** 99.0 Moderately correlated
43 L1MEd 8 n.s 99.0 Moderately correlated
44 L1PB4 8 n.s 99.0 Moderately correlated
45 L1M4a2 8 **** 99.0 Moderately correlated
46 L1MDa 8 n.s 99.0 Moderately correlated
47 L1MEg 7 n.s 99.0 Moderately correlated
48 MIR 7 n.s 99.0 Moderately correlated
49 L1MB5 7 n.s 99.0 Moderately correlated
50 L1PA7 6 n.s 74.0 Weakly correlated
51 L1M3f 6 **** 87.0 Weakly correlated
52 L1MB8 6 n.s 99.0 Moderately correlated
53 AluSx 6 n.s 74.0 Weakly correlated
54 L1MC3 5 n.s 99.0 Moderately correlated
55 L1M4a1 5 * 99.0 Moderately correlated
56 L1M3 5 n.s 99.0 Moderately correlated
57 L1PA5 5 n.s 19.6 Weakly correlated
58 L1ME2 5 n.s 99.0 Moderately correlated
59 MLT1C 5 n.s 94.0 Highly correlated
60 L1ME3A 4 n.s 99.0 Moderately correlated
61 L2b 4 n.s 99.0 Moderately correlated
62 MIRc 4 n.s 99.0 Moderately correlated
63 L1MD2 4 n.s 99.0 Moderately correlated
64 L1MC1 4 n.s 99.0 Moderately correlated
65 L1MB3 3 n.s 99.0 Moderately correlated
66 L1ME4c 3 n.s 99.0 Moderately correlated
67 L1PB2 3 n.s 74.0 Weakly correlated
68 L1PA13 3 n.s 74.0 Weakly correlated
69 MER31B 3 ** 99.0 Moderately correlated
70 L1P4 3 n.s 74.0 Weakly correlated
71 L2c 3 n.s 99.0 Moderately correlated
72 L1PA12 3 n.s 74.0 Weakly correlated
73 L1PA8A 3 n.s 74.0 Weakly correlated
74 L1ME4b 3 n.s 99.0 Moderately correlated
75 L1PA15-16 3 n.s 74.0 Weakly correlated
76 MSTA-int 3 n.s 43.0 Weakly correlated
77 L1MB4 3 n.s 99.0 Moderately correlated
78 L1MEc 3 n.s 99.0 Moderately correlated
79 L1PA14 3 n.s 74.0 Weakly correlated
80 L1MC4 2 n.s 99.0 Moderately correlated
81 L1ME2z 2 n.s 99.0 Moderately correlated
82 L1ME3B 2 n.s 99.0 Moderately correlated
83 AluSg 2 n.s 74.0 Weakly correlated
84 ERVL-E-int 2 n.s 99.0 Moderately correlated
85 L1MC5 2 n.s 99.0 Moderately correlated
86 L1PA2 2 n.s 15.2 Weakly correlated
87 AluSz 2 n.s 74.0 Weakly correlated
88 L1MC5a 2 n.s 99.0 Moderately correlated
89 L1ME3G 2 n.s 99.0 Moderately correlated
90 L1ME4a 2 n.s 99.0 Moderately correlated
91 L1PA4 2 n.s 19.6 Weakly correlated
92 L3 2 n.s 99.0 Moderately correlated
93 MLT1D 2 n.s 99.0 Moderately correlated
94 MLT1K 2 n.s 99.0 Moderately correlated
95 MLT1N2 2 n.s 99.0 Moderately correlated
96 AluJb 2 n.s 74.0 Weakly correlated
97 L1PA8 2 n.s 74.0 Weakly correlated
98 MIR3 2 n.s 99.0 Moderately correlated
99 L1M7 2 n.s 99.0 Moderately correlated
100 L1PA11 2 n.s 74.0 Weakly correlated
101 LTR16A2 2 n.s 99.0 Moderately correlated
102 LTR88b 2 * 99.0 Moderately correlated
103 MER4-int 2 n.s 74.0 Weakly correlated
104 MLT1E2 2 n.s 99.0 Moderately correlated
105 L1ME3Cz 2 n.s 99.0 Moderately correlated
106 MLT1A 2 n.s 99.0 Moderately correlated
107 L1M5 2 n.s 99.0 Moderately correlated
108 MLT1F 2 n.s 99.0 Moderately correlated
109 MLT2B1 2 n.s 99.0 Moderately correlated
110 MSTB-int 2 n.s 43.0 Weakly correlated
111 HAL1ME 1 n.s 99.0 Moderately correlated
112 L1HS 1 n.s 8.6 Weakly correlated
113 L1M8 1 n.s 99.0 Moderately correlated
114 L1MC4a 1 n.s 99.0 Moderately correlated
115 L1MD3 1 n.s 99.0 Moderately correlated
116 L1ME3C 1 n.s 99.0 Moderately correlated
117 LTR33C 1 n.s 99.0 Moderately correlated
118 LTR37A 1 n.s 99.0 Moderately correlated
119 LTR89 1 n.s 99.0 Moderately correlated
120 MER76 1 n.s 99.0 Moderately correlated
121 MER83C 1 ** 43.0 Weakly correlated
122 MLT1B-int 1 n.s 99.0 Moderately correlated
123 L1MD1 1 n.s 99.0 Moderately correlated
124 LTR7B 1 n.s 28.9 Weakly correlated
125 MER21B 1 n.s 99.0 Moderately correlated
126 MER21C 1 n.s 99.0 Moderately correlated
127 MLT1E 1 n.s 99.0 Moderately correlated
128 MLT1G-int 1 ** 99.0 Moderately correlated
129 MLT2B3 1 n.s 99.0 Moderately correlated
130 AluSz6 1 n.s 74.0 Weakly correlated
131 HERVIP10FH-int 1 n.s 28.9 Weakly correlated
132 L1MC2 1 n.s 99.0 Moderately correlated
133 L1MCc 1 n.s 99.0 Moderately correlated
134 L1P4e 1 * 74.0 Weakly correlated
135 LTR5_Hs 1 n.s 0.0 Weakly correlated
136 MER101B 1 ** 87.0 Weakly correlated
137 MER31A 1 n.s 87.0 Weakly correlated
138 AluJr4 1 n.s 74.0 Weakly correlated
139 AluSx3 1 n.s 74.0 Weakly correlated
140 ERV3-16A3_I-int 1 n.s 99.0 Moderately correlated
141 FLAM_C 1 n.s 74.0 Weakly correlated
142 L1P3 1 n.s 74.0 Weakly correlated
143 L1PA3 1 n.s 19.6 Weakly correlated
144 L1PA6 1 n.s 28.9 Weakly correlated
145 L1PBb 1 n.s 74.0 Weakly correlated
146 LTR40a 1 n.s 99.0 Moderately correlated
147 LTR62 1 * 74.0 Weakly correlated
148 LTR81 1 ** 99.0 Moderately correlated
149 LTR85c 1 n.s 99.0 Moderately correlated
150 MER57E1 1 * 87.0 Weakly correlated
151 MER68C 1 ** 99.0 Moderately correlated
152 UCON49 1 *** 0.0 Weakly correlated
153 AluSc 1 n.s 74.0 Weakly correlated
154 AluSp 1 n.s 74.0 Weakly correlated
155 AluY 1 n.s 74.0 Weakly correlated
156 L1ME3 1 n.s 99.0 Moderately correlated
157 L1MEj 1 n.s 99.0 Moderately correlated
158 MER84-int 1 * 74.0 Weakly correlated
159 PRIMAX-int 1 *** 74.0 Weakly correlated
160 AluSx1 1 n.s 74.0 Weakly correlated
161 HAL1b 1 n.s 99.0 Moderately correlated
162 L1MD 1 n.s 99.0 Moderately correlated
163 LTR16C 1 n.s 99.0 Moderately correlated
164 MER57A-int 1 n.s 43.0 Weakly correlated
165 MamRTE1 1 n.s 99.0 Moderately correlated
166 PRIMA41-int 1 n.s 74.0 Weakly correlated
167 HERV17-int 1 n.s 28.9 Weakly correlated
168 HERVL-int 1 n.s 74.0 Weakly correlated
169 L1M6 1 n.s 99.0 Moderately correlated
170 L1MCa 1 n.s 99.0 Moderately correlated
171 L1P4a 1 n.s 74.0 Weakly correlated
172 LTR24C 1 * 74.0 Weakly correlated
173 LTR81B 1 n.s 99.0 Moderately correlated
174 THE1B-int 1 n.s 43.0 Weakly correlated
175 AluSg4 1 n.s 74.0 Weakly correlated
176 AluSq2 1 n.s 74.0 Weakly correlated
177 L1M2b 1 * 87.0 Weakly correlated
178 L1PREC2 1 n.s 43.0 Weakly correlated
179 LTR7 1 n.s 19.6 Weakly correlated
180 MER110 1 * 99.0 Moderately correlated
181 MER31-int 1 n.s 99.0 Moderately correlated
182 MamGypsy2-I 1 n.s 99.0 Moderately correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 L1M1 74.0 Weakly correlated
2 L1M2 99.0 Moderately correlated
3 L1M2A 87.0 Weakly correlated
4 L1M2C 87.0 Weakly correlated
5 L1M3A 99.0 Moderately correlated
6 L1M3B 99.0 Moderately correlated
7 L1M3C 99.0 Moderately correlated
8 L1M3D 99.0 Moderately correlated
9 L1M3DE 99.0 Moderately correlated
10 L1M3E 99.0 Moderately correlated
11 L1M3F 87.0 Weakly correlated
12 L1M4 99.0 Moderately correlated
13 L1M4A2 99.0 Moderately correlated
14 L1M4B 99.0 Moderately correlated
15 L1M4C 99.0 Moderately correlated
16 L1MA4 87.0 Weakly correlated
17 L1MA4A 87.0 Weakly correlated
18 L1MA5A 87.0 Weakly correlated
19 L1MA6 87.0 Weakly correlated
20 L1MED 99.0 Moderately correlated
21 L1MEF 99.0 Moderately correlated
22 L1MEI 99.0 Moderately correlated
23 L1PB3 74.0 Weakly correlated
24 L1PBA 74.0 Weakly correlated
25 L1PBA1 74.0 Weakly correlated