ZRdb KZFP & Repeats
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Human_ZNF840P

  • Protein
    Putative zinc finger protein 840
  • Length
    716
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    0.0 Mya
  • Time of Changing in binding specificity
    0.0 Mya
  • Uniprot_ID
    A6NDX5
  • NCBI_ID
    100533646
Sequence:
MSLMGHGKVEMLLYAVPLLKAPNCLSSSMQLPHGGGRHQELVRFRDVAVVFSPEEWDHLTPEQRNLYKDVMLDNCKYLASLGNWTYKAHVMSSLKQGKEPWMMEREVTGDPCPACQPALATFRALNESGNAFRQSFHHGEYRTHRTFVQHYECDDCGMAFGHVSQLTGHQKIHKVGETHEYGENTRGFRHRSSFTMLQRICTLYKHFECNQCGETFNRPSKVIQHQSMHSGLKPYKCDVCQKAFRFLSSLSIHQRFHVGNRVNLTRHQKTHTQRKPFSCNFCGKTFHRFSEKTQHLLIHTRKKYYTCNYCKKEFNPYSKFILHQRTHTGEKPHKCDVCEKSFKSISNLNKHQKTHTGEKPFSCNECKKTFAQRTDLARHQQIHTGKKSFICSSCKKTFVRLSDLTQHKGTHTGERPYQCTTCEKAFKYRSNFTKHQKTHSIGRPFACNECGKTYRLNWELNQHKKIHTGEKPYECGECGKRFNNNSNLNKHKKIHTGEKHFVCNQCGKAFSLNSKLSRHQRTHNKKENSSKSVSNLNKHQKTHAGEKPFPCNECKKAFAQRMDLARHQQIHTGRKPFICSSCKKTFVRLSDLTQHKGTHTGERPYQCTTCEKAFKYQSNFTKHQKTHSIGRPFTCNECGKTFRLNWKLNQHKKIHTGEKPYECGECGKCFNNNSNLSKHKKIHTGEKHFVCNQCGKAFSLNSKLSRHQITHNKKKP
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
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# Domain name Pos
1 KRAB 42..113
2 C2h2 151..173
3 C2h2 207..229
4 C2h2 235..257
5 C2h2 277..299
6 C2h2 305..327
7 C2h2 333..355
8 C2h2 361..383
9 C2h2 389..411
10 C2h2 417..439
11 C2h2 445..467
12 C2h2 473..495
13 C2h2 501..523
14 C2h2 549..571
15 C2h2 577..599
16 C2h2 605..627
17 C2h2 633..655
18 C2h2 661..683
19 C2h2 689..711
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription activator activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
No
Motif(Predicted) DNA binding motifs predicted using Zinc Finger Recognition Code. :
Forward:
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No Chip-seq
No Chip-seq
No Chip-seq