ZRdb KZFP & Repeats
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Human_ZNF425

  • Protein
    Zinc finger protein 425
  • Length
    752
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    94.0 Mya
  • Time of Changing in binding specificity
    94.0 Mya
  • Uniprot_ID
    Q6IV72
  • NCBI_ID
    155054
Sequence:
MAEPASVTVTFDDVALYFSEQEWEILEKWQKQMYKQEMKTNYETLDSLGYAFSKPDLITWMEQGRMLLISEQGCLDKTRRTTSPPTDEQLNMKNTGKLLCFDDEGTPRTKEEDCRLNGPQKQDLCAALRGKERKILLAQTATFQSPSLRETEILNKKVSITAYDPDKKDLRHKPRETPGRLEIPTGPRCYSCYVCRKVFQVRRDLLKHKRSHSKSQLCRYPKYKNSSRGKSELRRTQRLLCQKKRFQCSECEKSYFLKGSLVTHQVVHTGQRPYPCPECDKTFRYRANLKKHLCLHRGERPFCCGECGRAFVQQCELTEHLRLHSGEKPFQCPQCDRCFRLKRGMKVHLTQHSGKRPFHCPECGRSFSRKAALKTHQRTHSEEKPFSCGECGRKFIYKIKLDEHIRVHTGEKPFSCPECNKSFRLKRSLKAHGLQHIGKRPFQCPECSRGFFWRNAMRAHQRLHSEQKPFPCAECGKRFTRPSKLACHTRVHDRQKEFPCGECKKTFSQQSRLTQHLKVHTTEKPFSCAECGRSFRRRAHLTEHTRLHSGEEPFQCPECDKSFSWKASMKFHQRMHRDEKPFACGECDKTYTHQSQLTEHLRLHSGEKPYQCPECEKTFRLKGNLKSHLLQHSGQKPFSCVMCGKSFTQQYRLTEHIRVHSGEKPFQCPECDKSYCIRGSLKVHLYKHSGERPFQCPECGKGFLQKRSLKAHLCLHSGERPFSCDECGRSFTYVGALKTHIAVHAKEKPSSL
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 9..80
2 C2h2 190..212
3 C2h2 246..268
4 C2h2 274..296
5 C2h2 302..324
6 C2h2 330..352
7 C2h2 358..380
8 C2h2 386..408
9 C2h2 414..436
10 C2h2 442..464
11 C2h2 470..492
12 C2h2 498..520
13 C2h2 526..548
14 C2h2 554..576
15 C2h2 582..604
16 C2h2 610..632
17 C2h2 638..660
18 C2h2 666..688
19 C2h2 694..716
20 C2h2 722..744
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component cytoplasm
2 Cellular Component nucleoplasm
3 Cellular Component nucleus
4 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
5 Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific
6 Molecular Function metal ion binding
7 Molecular Function RNA polymerase II transcription regulatory region sequence-specific DNA binding
8 Biological Process negative regulation of DNA-templated transcription
9 Biological Process negative regulation of transcription by RNA polymerase II
10 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
...
Reverse:
...
Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1M1 148 **** 74.0 Weakly correlated
2 L1PA7 123 **** 74.0 Weakly correlated
3 L1PA4 120 **** 19.6 Weakly correlated
4 L1PA5 114 **** 19.6 Weakly correlated
5 MIRb 113 **** 99.0 Moderately correlated
6 L2a 109 n.s 99.0 Moderately correlated
7 L2c 104 **** 99.0 Moderately correlated
8 MLT1A1 104 **** 87.0 Weakly correlated
9 L1PA6 100 **** 28.9 Weakly correlated
10 MIR 80 * 99.0 Moderately correlated
11 L1MA3 77 **** 74.0 Weakly correlated
12 L1PA3 67 *** 19.6 Weakly correlated
13 L2b 67 *** 99.0 Moderately correlated
14 MIRc 60 **** 99.0 Moderately correlated
15 AluSx1 57 n.s 74.0 Weakly correlated
16 MIR3 57 **** 99.0 Moderately correlated
17 AluJb 53 n.s 74.0 Weakly correlated
18 AluY 40 n.s 74.0 Weakly correlated
19 L2 38 n.s 99.0 Moderately correlated
20 AluJr 34 n.s 74.0 Weakly correlated
21 AluSx 32 n.s 74.0 Weakly correlated
22 L1PA8 31 *** 74.0 Weakly correlated
23 MSTB1 31 **** 74.0 Weakly correlated
24 AluJo 29 n.s 74.0 Weakly correlated
25 AluSz 29 n.s 74.0 Weakly correlated
26 AluSq2 28 n.s 74.0 Weakly correlated
27 L1PA2 28 n.s 15.2 Weakly correlated
28 LTR55 28 **** 99.0 Moderately correlated
29 MLT1D 27 ** 99.0 Moderately correlated
30 L1PA10 26 ** 74.0 Weakly correlated
31 MLT1A0 26 *** 99.0 Moderately correlated
32 L1MA4 24 * 87.0 Weakly correlated
33 L3 21 n.s 99.0 Moderately correlated
34 AluSp 20 n.s 74.0 Weakly correlated
35 AluSz6 18 n.s 74.0 Weakly correlated
36 L1PA8A 18 *** 74.0 Weakly correlated
37 L1MA2 17 n.s 74.0 Weakly correlated
38 THE1B 17 n.s 43.0 Weakly correlated
39 MLT1K 16 * 99.0 Moderately correlated
40 L1MB3 15 n.s 99.0 Moderately correlated
41 L1MEc 15 n.s 99.0 Moderately correlated
42 L1P1 15 ** 19.6 Weakly correlated
43 L1P3 15 *** 74.0 Weakly correlated
44 L1PA11 15 * 74.0 Weakly correlated
45 LTR71B 15 **** 43.0 Weakly correlated
46 AluSc8 14 n.s 74.0 Weakly correlated
47 L1M5 14 n.s 99.0 Moderately correlated
48 LTR13 14 **** 19.6 Weakly correlated
49 AluSx3 13 n.s 74.0 Weakly correlated
50 L1MC4 13 n.s 99.0 Moderately correlated
51 MSTD 13 *** 74.0 Weakly correlated
52 HAL1 12 n.s 99.0 Moderately correlated
53 MLT1C 12 n.s 94.0 Highly correlated
54 L1MC5a 11 n.s 99.0 Moderately correlated
55 L1P2 10 * 28.9 Weakly correlated
56 LTR16A1 10 **** 99.0 Moderately correlated
57 LTR5_Hs 10 **** 0.0 Weakly correlated
58 MIR1_Amn 10 *** 319.0 Weakly correlated
59 THE1D 10 n.s 43.0 Weakly correlated
60 L1M4 9 n.s 99.0 Moderately correlated
61 L1MD2 9 n.s 99.0 Moderately correlated
62 L1PA16 9 n.s 74.0 Weakly correlated
63 L1PREC2 9 n.s 43.0 Weakly correlated
64 LTR33 9 * 99.0 Moderately correlated
65 MLT1B 9 n.s 99.0 Moderately correlated
66 MLT1J 9 n.s 99.0 Moderately correlated
67 MLT1L 9 n.s 99.0 Moderately correlated
68 AluSc 8 n.s 74.0 Weakly correlated
69 L1MC1 8 n.s 99.0 Moderately correlated
70 L1MC5 8 n.s 99.0 Moderately correlated
71 L1ME4a 8 n.s 99.0 Moderately correlated
72 L1MEd 8 n.s 99.0 Moderately correlated
73 L1PA13 8 n.s 74.0 Weakly correlated
74 L1PB1 8 n.s 74.0 Weakly correlated
75 MLT1F2 8 n.s 99.0 Moderately correlated
76 THE1C 8 n.s 43.0 Weakly correlated
77 AluSc5 7 n.s 74.0 Weakly correlated
78 AluSg 7 n.s 74.0 Weakly correlated
79 ERVL-E-int 7 n.s 99.0 Moderately correlated
80 L1MB7 7 n.s 99.0 Moderately correlated
81 LTR16C 7 n.s 99.0 Moderately correlated
82 LTR41B 7 **** 99.0 Moderately correlated
83 MER11B 7 **** 19.6 Weakly correlated
84 MER34B 7 **** 87.0 Weakly correlated
85 MSTB 7 n.s 43.0 Weakly correlated
86 MSTB2 7 **** 74.0 Weakly correlated
87 AluJr4 6 n.s 74.0 Weakly correlated
88 AluSq 6 n.s 74.0 Weakly correlated
89 AluYj4 6 ** 0.0 Weakly correlated
90 L1MA5 6 n.s 87.0 Weakly correlated
91 L1MB4 6 n.s 99.0 Moderately correlated
92 L1MB5 6 n.s 99.0 Moderately correlated
93 L1ME1 6 n.s 99.0 Moderately correlated
94 L1MEf 6 n.s 99.0 Moderately correlated
95 LTR78B 6 ** 99.0 Moderately correlated
96 MER11C 6 ** 19.6 Weakly correlated
97 MER39 6 * 74.0 Weakly correlated
98 MamRTE1 6 * 99.0 Moderately correlated
99 AluSg4 5 n.s 74.0 Weakly correlated
100 AluSx4 5 n.s 74.0 Weakly correlated
101 ERV3-16A3_I-int 5 n.s 99.0 Moderately correlated
102 FLAM_A 5 n.s 74.0 Weakly correlated
103 FLAM_C 5 n.s 74.0 Weakly correlated
104 FRAM 5 * 74.0 Weakly correlated
105 L1MA6 5 n.s 87.0 Weakly correlated
106 L1MA8 5 n.s 87.0 Weakly correlated
107 L1MA9 5 n.s 99.0 Moderately correlated
108 L1MC4a 5 n.s 99.0 Moderately correlated
109 L1ME3 5 n.s 99.0 Moderately correlated
110 L1ME4b 5 n.s 99.0 Moderately correlated
111 L1PA15-16 5 n.s 74.0 Weakly correlated
112 L1PA17 5 n.s 74.0 Weakly correlated
113 L4_A_Mam 5 n.s 99.0 Moderately correlated
114 LTR12C 5 n.s 19.6 Weakly correlated
115 LTR16B2 5 ** 99.0 Moderately correlated
116 LTR26 5 **** 74.0 Weakly correlated
117 LTR41 5 *** 99.0 Moderately correlated
118 LTR88a 5 **** 99.0 Moderately correlated
119 MLT1A 5 n.s 99.0 Moderately correlated
120 MLT1F 5 n.s 99.0 Moderately correlated
121 MLT1H 5 n.s 99.0 Moderately correlated
122 MLT1I 5 n.s 99.0 Moderately correlated
123 MLT1N2 5 * 99.0 Moderately correlated
124 MLT1O 5 * 99.0 Moderately correlated
125 MSTA 5 n.s 43.0 Weakly correlated
126 MamRep605 5 * 99.0 Moderately correlated
127 ERVL-B4-int 4 n.s 99.0 Moderately correlated
128 HERVK-int 4 * 28.9 Weakly correlated
129 HERVS71-int 4 ** 28.9 Weakly correlated
130 L1HS 4 n.s 8.6 Weakly correlated
131 L1M2 4 n.s 99.0 Moderately correlated
132 L1M4c 4 n.s 99.0 Moderately correlated
133 L1M6 4 n.s 99.0 Moderately correlated
134 L1MA7 4 n.s 87.0 Weakly correlated
135 L1MB1 4 n.s 99.0 Moderately correlated
136 L1MB8 4 n.s 99.0 Moderately correlated
137 L1MDa 4 n.s 99.0 Moderately correlated
138 L1ME3A 4 n.s 99.0 Moderately correlated
139 L1ME3G 4 n.s 99.0 Moderately correlated
140 L1MEg 4 n.s 99.0 Moderately correlated
141 L3b 4 n.s 99.0 Moderately correlated
142 L4_C_Mam 4 n.s 99.0 Moderately correlated
143 LFSINE_Vert 4 *** 319.0 Weakly correlated
144 LTR101_Mam 4 *** 99.0 Moderately correlated
145 LTR10A 4 **** 28.9 Weakly correlated
146 LTR16 4 n.s 99.0 Moderately correlated
147 LTR16A 4 n.s 99.0 Moderately correlated
148 LTR16A2 4 ** 99.0 Moderately correlated
149 LTR78 4 n.s 99.0 Moderately correlated
150 MER31A 4 ** 87.0 Weakly correlated
151 MER34 4 ** 87.0 Weakly correlated
152 MER50-int 4 ** 43.0 Weakly correlated
153 MLT1H1 4 n.s 99.0 Moderately correlated
154 MSTA1 4 **** 74.0 Weakly correlated
155 MSTC 4 n.s 74.0 Weakly correlated
156 THE1B-int 4 n.s 43.0 Weakly correlated
157 AluYm1 3 n.s 19.6 Weakly correlated
158 AmnSINE1 3 ** 319.0 Weakly correlated
159 ERV24_Prim-int 3 ** 74.0 Weakly correlated
160 HAL1ME 3 n.s 99.0 Moderately correlated
161 HERV3-int 3 * 28.9 Weakly correlated
162 L1M3 3 n.s 99.0 Moderately correlated
163 L1MA4A 3 n.s 87.0 Weakly correlated
164 L1MB2 3 n.s 99.0 Moderately correlated
165 L1ME3Cz 3 n.s 99.0 Moderately correlated
166 L1ME3D 3 n.s 99.0 Moderately correlated
167 L1ME4c 3 n.s 99.0 Moderately correlated
168 LTR103b_Mam 3 **** 99.0 Moderately correlated
169 LTR16B1 3 * 99.0 Moderately correlated
170 LTR16E1 3 n.s 99.0 Moderately correlated
171 LTR50 3 n.s 99.0 Moderately correlated
172 LTR71A 3 **** 43.0 Weakly correlated
173 MER41-int 3 n.s 74.0 Weakly correlated
174 MER50 3 n.s 43.0 Weakly correlated
175 MER65A 3 * 74.0 Weakly correlated
176 MER67D 3 ** 99.0 Moderately correlated
177 MER68 3 * 99.0 Moderately correlated
178 MER68C 3 **** 99.0 Moderately correlated
179 MER70A 3 ** 87.0 Weakly correlated
180 MER83 3 *** 43.0 Weakly correlated
181 MLT1G1 3 n.s 99.0 Moderately correlated
182 MLT1J2 3 n.s 99.0 Moderately correlated
183 MLT1M 3 * 99.0 Moderately correlated
184 PABL_A-int 3 ** 74.0 Weakly correlated
185 THE1A 3 n.s 43.0 Weakly correlated
186 Alu 2 * 74.0 Weakly correlated
187 AluYa5 2 n.s 15.2 Weakly correlated
188 AluYf1 2 n.s 19.6 Weakly correlated
189 HAL1M8 2 n.s 99.0 Moderately correlated
190 HAL1b 2 n.s 99.0 Moderately correlated
191 HERV16-int 2 n.s 99.0 Moderately correlated
192 HERVK22-int 2 n.s 43.0 Weakly correlated
193 HERVK3-int 2 n.s 28.9 Weakly correlated
194 HERVL18-int 2 n.s 43.0 Weakly correlated
195 HERVL74-int 2 ** 99.0 Moderately correlated
196 HUERS-P3-int 2 n.s 43.0 Weakly correlated
197 L1M4b 2 n.s 99.0 Moderately correlated
198 L1M7 2 n.s 99.0 Moderately correlated
199 L1M8 2 n.s 99.0 Moderately correlated
200 L1MA1 2 n.s 74.0 Weakly correlated
201 L1MC3 2 n.s 99.0 Moderately correlated
202 L1MCc 2 n.s 99.0 Moderately correlated
203 L1MD 2 n.s 99.0 Moderately correlated
204 L1ME2 2 n.s 99.0 Moderately correlated
205 L1ME2z 2 n.s 99.0 Moderately correlated
206 L1MEb 2 n.s 99.0 Moderately correlated
207 L1PA12 2 n.s 74.0 Weakly correlated
208 L1PA15 2 n.s 74.0 Weakly correlated
209 L1PB3 2 n.s 74.0 Weakly correlated
210 L2-3_Crp 2 n.s 431.0 Weakly correlated
211 LTR1 2 ** 43.0 Weakly correlated
212 LTR12D 2 n.s 19.6 Weakly correlated
213 LTR13_ 2 *** 28.9 Weakly correlated
214 LTR1A2 2 n.s 43.0 Weakly correlated
215 LTR25-int 2 n.s 43.0 Weakly correlated
216 LTR33A 2 n.s 99.0 Moderately correlated
217 LTR33A_ 2 n.s 99.0 Moderately correlated
218 LTR43-int 2 ** 74.0 Weakly correlated
219 LTR48 2 n.s 74.0 Weakly correlated
220 LTR54B 2 * 74.0 Weakly correlated
221 LTR7B 2 * 28.9 Weakly correlated
222 LTR82A 2 * 99.0 Moderately correlated
223 LTR9D 2 * 43.0 Weakly correlated
224 MER31-int 2 n.s 99.0 Moderately correlated
225 MER31B 2 n.s 99.0 Moderately correlated
226 MER34A 2 n.s 99.0 Moderately correlated
227 MER34A1 2 * 99.0 Moderately correlated
228 MER41C 2 * 74.0 Weakly correlated
229 MER4A 2 n.s 74.0 Weakly correlated
230 MER50B 2 * 43.0 Weakly correlated
231 MER65C 2 * 74.0 Weakly correlated
232 MER66B 2 n.s 43.0 Weakly correlated
233 MER88 2 **** 99.0 Moderately correlated
234 MLT1-int 2 *** 99.0 Moderately correlated
235 MLT1E1 2 * 99.0 Moderately correlated
236 MLT1E1A 2 n.s 99.0 Moderately correlated
237 MLT1E2 2 n.s 99.0 Moderately correlated
238 MLT1F1 2 n.s 99.0 Moderately correlated
239 MLT1G 2 n.s 99.0 Moderately correlated
240 MLT1H2 2 n.s 99.0 Moderately correlated
241 MLT1J1 2 n.s 99.0 Moderately correlated
242 MLT2D 2 n.s 99.0 Moderately correlated
243 SVA_B 2 n.s 15.2 Weakly correlated
244 SVA_F 2 n.s 0.0 Weakly correlated
245 THE1C-int 2 n.s 43.0 Weakly correlated
246 THE1D-int 2 n.s 28.9 Weakly correlated
247 AluSq10 1 n.s 74.0 Weakly correlated
248 AluYb8 1 n.s 15.2 Weakly correlated
249 AluYc 1 n.s 74.0 Weakly correlated
250 AluYg6 1 n.s 15.2 Weakly correlated
251 AluYh3 1 n.s 15.2 Weakly correlated
252 CR1_Mam 1 n.s 99.0 Moderately correlated
253 ERV3-16A3_LTR 1 n.s 99.0 Moderately correlated
254 ERVL-int 1 n.s 99.0 Moderately correlated
255 FAM 1 n.s 87.0 Weakly correlated
256 HERV-Fc2-int 1 *** 15.2 Weakly correlated
257 HERV15-int 1 n.s 28.9 Weakly correlated
258 HERV4_I-int 1 n.s 43.0 Weakly correlated
259 HERVE-int 1 n.s 19.6 Weakly correlated
260 HERVE_a-int 1 n.s 28.9 Weakly correlated
261 HERVFH21-int 1 * 28.9 Weakly correlated
262 HERVIP10B3-int 1 n.s 28.9 Weakly correlated
263 HERVK11-int 1 n.s 28.9 Weakly correlated
264 HERVK13-int 1 * 19.6 Weakly correlated
265 HUERS-P1-int 1 n.s 43.0 Weakly correlated
266 HUERS-P2-int 1 n.s 43.0 Weakly correlated
267 HUERS-P3b-int 1 n.s 43.0 Weakly correlated
268 L1M2a 1 n.s 87.0 Weakly correlated
269 L1M3a 1 n.s 99.0 Moderately correlated
270 L1M3e 1 n.s 99.0 Moderately correlated
271 L1M3f 1 n.s 87.0 Weakly correlated
272 L1M4a1 1 n.s 99.0 Moderately correlated
273 L1MA5A 1 n.s 87.0 Weakly correlated
274 L1MC2 1 n.s 99.0 Moderately correlated
275 L1MCa 1 n.s 99.0 Moderately correlated
276 L1MCb 1 n.s 99.0 Moderately correlated
277 L1MD1 1 n.s 99.0 Moderately correlated
278 L1MD3 1 n.s 99.0 Moderately correlated
279 L1ME3B 1 n.s 99.0 Moderately correlated
280 L1ME3F 1 n.s 99.0 Moderately correlated
281 L1MEh 1 n.s 99.0 Moderately correlated
282 L1MEi 1 n.s 99.0 Moderately correlated
283 L1MEj 1 n.s 99.0 Moderately correlated
284 L1P4a 1 n.s 74.0 Weakly correlated
285 L1P4d 1 * 74.0 Weakly correlated
286 L1P5 1 * 74.0 Weakly correlated
287 L1PA14 1 n.s 74.0 Weakly correlated
288 L1PB4 1 n.s 99.0 Moderately correlated
289 L1PBa 1 n.s 74.0 Weakly correlated
290 LTR103_Mam 1 * 99.0 Moderately correlated
291 LTR107_Mam 1 * 99.0 Moderately correlated
292 LTR10E 1 * 28.9 Weakly correlated
293 LTR13A 1 n.s 28.9 Weakly correlated
294 LTR16E2 1 n.s 99.0 Moderately correlated
295 LTR18B 1 n.s 43.0 Weakly correlated
296 LTR1A1 1 n.s 43.0 Weakly correlated
297 LTR1E 1 n.s 43.0 Weakly correlated
298 LTR22B 1 * 28.9 Weakly correlated
299 LTR27E 1 * 43.0 Weakly correlated
300 LTR30 1 * 28.9 Weakly correlated
301 LTR33B 1 n.s 99.0 Moderately correlated
302 LTR33C 1 n.s 99.0 Moderately correlated
303 LTR37A 1 n.s 99.0 Moderately correlated
304 LTR38C 1 ** 74.0 Weakly correlated
305 LTR45 1 ** 99.0 Moderately correlated
306 LTR49 1 n.s 74.0 Weakly correlated
307 LTR52-int 1 * 99.0 Moderately correlated
308 LTR53 1 n.s 99.0 Moderately correlated
309 LTR53B 1 * 99.0 Moderately correlated
310 LTR65 1 * 99.0 Moderately correlated
311 LTR6A 1 * 28.9 Weakly correlated
312 LTR7 1 n.s 19.6 Weakly correlated
313 LTR75 1 * 99.0 Moderately correlated
314 LTR79 1 n.s 99.0 Moderately correlated
315 LTR81A 1 n.s 99.0 Moderately correlated
316 LTR81AB 1 ** 99.0 Moderately correlated
317 LTR84b 1 n.s 99.0 Moderately correlated
318 LTR85a 1 n.s 99.0 Moderately correlated
319 LTR85c 1 n.s 99.0 Moderately correlated
320 LTR88b 1 n.s 99.0 Moderately correlated
321 LTR89 1 n.s 99.0 Moderately correlated
322 LTR8A 1 n.s 43.0 Weakly correlated
323 LTR8B 1 n.s 43.0 Weakly correlated
324 LTR9 1 n.s 43.0 Weakly correlated
325 LTR91 1 ** 99.0 Moderately correlated
326 LTR9B 1 n.s 43.0 Weakly correlated
327 MER101-int 1 n.s 74.0 Weakly correlated
328 MER110-int 1 n.s 99.0 Moderately correlated
329 MER110A 1 n.s 99.0 Moderately correlated
330 MER21A 1 n.s 74.0 Weakly correlated
331 MER21B 1 n.s 99.0 Moderately correlated
332 MER34C2 1 n.s 74.0 Weakly correlated
333 MER34D 1 * 74.0 Weakly correlated
334 MER39B 1 n.s 74.0 Weakly correlated
335 MER4-int 1 n.s 74.0 Weakly correlated
336 MER41B 1 n.s 74.0 Weakly correlated
337 MER41D 1 * 74.0 Weakly correlated
338 MER4CL34 1 n.s 43.0 Weakly correlated
339 MER4D 1 n.s 74.0 Weakly correlated
340 MER51B 1 n.s 43.0 Weakly correlated
341 MER51C 1 * 43.0 Weakly correlated
342 MER54A 1 n.s 87.0 Weakly correlated
343 MER57-int 1 n.s 87.0 Weakly correlated
344 MER57B1 1 n.s 43.0 Weakly correlated
345 MER57E3 1 ** 74.0 Weakly correlated
346 MER61A 1 n.s 43.0 Weakly correlated
347 MER65D 1 * 87.0 Weakly correlated
348 MER68B 1 * 99.0 Moderately correlated
349 MER73 1 * 87.0 Weakly correlated
350 MER74B 1 n.s 99.0 Moderately correlated
351 MER74C 1 * 99.0 Moderately correlated
352 MER76 1 n.s 99.0 Moderately correlated
353 MER77 1 n.s 99.0 Moderately correlated
354 MER84 1 * 43.0 Weakly correlated
355 MER90 1 n.s 99.0 Moderately correlated
356 MER90a 1 n.s 99.0 Moderately correlated
357 MER9a3 1 n.s 28.9 Weakly correlated
358 MLT1A0-int 1 n.s 99.0 Moderately correlated
359 MLT1C-int 1 n.s 94.0 Highly correlated
360 MLT1G1-int 1 * 99.0 Moderately correlated
361 MLT1G3 1 n.s 99.0 Moderately correlated
362 MLT1H1-int 1 n.s 99.0 Moderately correlated
363 MLT1J-int 1 n.s 99.0 Moderately correlated
364 MLT1J2-int 1 n.s 99.0 Moderately correlated
365 MLT2A1 1 n.s 74.0 Weakly correlated
366 MLT2B1 1 n.s 99.0 Moderately correlated
367 MLT2B2 1 n.s 99.0 Moderately correlated
368 MLT2B5 1 * 87.0 Weakly correlated
369 MLT2F 1 n.s 99.0 Moderately correlated
370 MSTA-int 1 n.s 43.0 Weakly correlated
371 MSTB-int 1 n.s 43.0 Weakly correlated
372 MamGypLTR2b 1 * 99.0 Moderately correlated
373 PRIMA4_LTR 1 * 74.0 Weakly correlated
374 Penelope1_Vert 1 * 319.0 Weakly correlated
375 Plat_L3 1 n.s 99.0 Moderately correlated
376 SVA_C 1 n.s 15.2 Weakly correlated
377 THE1-int 1 * 43.0 Weakly correlated
378 THE1A-int 1 n.s 43.0 Weakly correlated
379 X6A_LINE 1 * 99.0 Moderately correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1PA7 115 **** 74.0 Weakly correlated
2 L1PA5 108 **** 19.6 Weakly correlated
3 L1PA4 102 **** 19.6 Weakly correlated
4 L1PA6 92 **** 28.9 Weakly correlated
5 L1M1 51 **** 74.0 Weakly correlated
6 L1PA3 51 n.s 19.6 Weakly correlated
7 L1MA3 29 * 74.0 Weakly correlated
8 AluSx1 27 n.s 74.0 Weakly correlated
9 L1PA8 25 * 74.0 Weakly correlated
10 L1PA2 24 n.s 15.2 Weakly correlated
11 AluY 21 n.s 74.0 Weakly correlated
12 AluJb 20 n.s 74.0 Weakly correlated
13 L1PA10 20 n.s 74.0 Weakly correlated
14 L1PA8A 16 ** 74.0 Weakly correlated
15 AluSx 14 n.s 74.0 Weakly correlated
16 L1P1 14 ** 19.6 Weakly correlated
17 AluJr 14 n.s 74.0 Weakly correlated
18 L1P3 13 ** 74.0 Weakly correlated
19 L1PA11 12 n.s 74.0 Weakly correlated
20 L2c 9 n.s 99.0 Moderately correlated
21 AluSq2 9 n.s 74.0 Weakly correlated
22 AluSx3 8 n.s 74.0 Weakly correlated
23 AluSz 8 n.s 74.0 Weakly correlated
24 L1MA4 8 n.s 87.0 Weakly correlated
25 L1P2 8 n.s 28.9 Weakly correlated
26 AluSc8 7 n.s 74.0 Weakly correlated
27 AluSp 7 n.s 74.0 Weakly correlated
28 L1MA2 7 n.s 74.0 Weakly correlated
29 AluJo 6 n.s 74.0 Weakly correlated
30 L1PA13 5 n.s 74.0 Weakly correlated
31 MLT1A1 4 n.s 87.0 Weakly correlated
32 AluSx4 4 n.s 74.0 Weakly correlated
33 L2a 4 n.s 99.0 Moderately correlated
34 AluSc5 4 n.s 74.0 Weakly correlated
35 AluSq 4 n.s 74.0 Weakly correlated
36 MER34B 4 *** 87.0 Weakly correlated
37 AluSz6 4 n.s 74.0 Weakly correlated
38 L1PREC2 4 n.s 43.0 Weakly correlated
39 AluSg4 3 n.s 74.0 Weakly correlated
40 MIRb 3 n.s 99.0 Moderately correlated
41 L1HS 3 n.s 8.6 Weakly correlated
42 L1PB1 3 n.s 74.0 Weakly correlated
43 L2 3 n.s 99.0 Moderately correlated
44 L1MEc 3 n.s 99.0 Moderately correlated
45 L3 2 n.s 99.0 Moderately correlated
46 LTR55 2 ** 99.0 Moderately correlated
47 MIRc 2 n.s 99.0 Moderately correlated
48 AluYj4 2 n.s 0.0 Weakly correlated
49 L1MB4 2 n.s 99.0 Moderately correlated
50 FLAM_C 2 n.s 74.0 Weakly correlated
51 L1M2 2 n.s 99.0 Moderately correlated
52 L1PA12 2 n.s 74.0 Weakly correlated
53 L2b 2 n.s 99.0 Moderately correlated
54 MIR 2 n.s 99.0 Moderately correlated
55 L1ME3Cz 2 n.s 99.0 Moderately correlated
56 LTR71B 2 ** 43.0 Weakly correlated
57 AluJr4 1 n.s 74.0 Weakly correlated
58 AluSq10 1 n.s 74.0 Weakly correlated
59 AluYf1 1 n.s 19.6 Weakly correlated
60 FLAM_A 1 n.s 74.0 Weakly correlated
61 L1M4c 1 n.s 99.0 Moderately correlated
62 L1MA4A 1 n.s 87.0 Weakly correlated
63 L1ME4a 1 n.s 99.0 Moderately correlated
64 MIR3 1 n.s 99.0 Moderately correlated
65 PRIMA4_LTR 1 * 74.0 Weakly correlated
66 AluYc 1 n.s 74.0 Weakly correlated
67 L1M4 1 n.s 99.0 Moderately correlated
68 L1MDa 1 n.s 99.0 Moderately correlated
69 L1ME3 1 n.s 99.0 Moderately correlated
70 THE1C-int 1 n.s 43.0 Weakly correlated
71 AluYb8 1 n.s 15.2 Weakly correlated
72 L1MB8 1 n.s 99.0 Moderately correlated
73 L1MC1 1 n.s 99.0 Moderately correlated
74 L1PA15 1 n.s 74.0 Weakly correlated
75 L4_A_Mam 1 n.s 99.0 Moderately correlated
76 MER34 1 n.s 87.0 Weakly correlated
77 MER83 1 n.s 43.0 Weakly correlated
78 MSTB1 1 n.s 74.0 Weakly correlated
79 ERVL-E-int 1 n.s 99.0 Moderately correlated
80 L1M3 1 n.s 99.0 Moderately correlated
81 L1MA5 1 n.s 87.0 Weakly correlated
82 L1MB1 1 n.s 99.0 Moderately correlated
83 L1ME4c 1 n.s 99.0 Moderately correlated
84 L1P4d 1 * 74.0 Weakly correlated
85 LTR13 1 n.s 19.6 Weakly correlated
86 LTR71A 1 ** 43.0 Weakly correlated
87 MER11C 1 n.s 19.6 Weakly correlated
88 PABL_A-int 1 n.s 74.0 Weakly correlated
89 L1MA6 1 n.s 87.0 Weakly correlated
90 MER65A 1 n.s 74.0 Weakly correlated
91 HERVE-int 1 n.s 19.6 Weakly correlated
92 HERVFH21-int 1 * 28.9 Weakly correlated
93 LTR16C 1 n.s 99.0 Moderately correlated
94 MSTB 1 n.s 43.0 Weakly correlated
95 AluSg 1 n.s 74.0 Weakly correlated
96 ERVL-B4-int 1 n.s 99.0 Moderately correlated
97 L1MB3 1 n.s 99.0 Moderately correlated
98 L1MB7 1 n.s 99.0 Moderately correlated
99 MSTA1 1 n.s 74.0 Weakly correlated
100 AluYm1 1 n.s 19.6 Weakly correlated
101 L1MA8 1 n.s 87.0 Weakly correlated
102 L1MC4 1 n.s 99.0 Moderately correlated
103 L1PBa 1 n.s 74.0 Weakly correlated
104 LTR48 1 n.s 74.0 Weakly correlated
105 MER110A 1 n.s 99.0 Moderately correlated
106 MLT1F1 1 n.s 99.0 Moderately correlated
107 THE1B 1 n.s 43.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUSC8 74.0 Weakly correlated
2 ALUSQ2 74.0 Weakly correlated
3 ALUSX1 74.0 Weakly correlated
4 ALUY 74.0 Weakly correlated
5 L1M1 74.0 Weakly correlated
6 L1MA2 74.0 Weakly correlated
7 L1MA3 74.0 Weakly correlated