ZRdb KZFP & Repeats
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Human_ZKSCAN5

  • Protein
    Zinc finger protein with KRAB and SCAN domains 5
  • Length
    839
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    160.0 Mya
  • Time of Changing in binding specificity
    160.0 Mya
  • Uniprot_ID
    Q9Y2L8
  • NCBI_ID
    23660
Sequence:
MIMTESREVIDLDPPAETSQEQEDLFIVKVEEEDCTWMQEYNPPTFETFYQRFRHFQYHEASGPREALSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQPWVREHHPESGEEAVAVIENIQRELEERRQQIVACPDVLPRKMATPGAVQESCSPHPLTVDTQPEQAPQKPRLLEENALPVLQVPSLPLKDSQELTASLLSTGSQKLVKIEEVADVAVSFILEEWGHLDQSQKSLYRDDRKENYGSITSMGYESRDNMELIVKQISDDSESHWVAPEHTERSVPQDPDFAEVSDLKGMVQRWQVNPTVGKSRQNPSQKRDLDAITDISPKQSTHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSQRCSDKRSKNTKLSVKKKISEYSEADMELSGKTQRNVSQVQDFGEGCEFQGKLDRKQGIPMKEILGQPSSKRMNYSEVPYVHKKSSTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPFRCEECGKSYNQRVHLTQHQRVHTGEKPYTCPLCGKAFRVRSHLVQHQSVHSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNEKNGICEEAYSWNLTVIEDKKIELQEQPYQCDICGKAFGYSSDLIQHYRTHTAEKPYQCDICRENVGQCSHTKQHQKIYSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPINTLSVEGSLL
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 scan 51..132
2 KRAB 218..291
3 C2h2 346..368
4 C2h2 374..396
5 C2h2 402..424
6 C2h2 430..452
7 C2h2 549..571
8 C2h2 577..599
9 C2h2 605..627
10 C2h2 633..655
11 C2h2 661..683
12 C2h2 717..739
13 C2h2 745..763
14 C2h2 773..795
15 C2h2 801..823
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity
3 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Molecular Function zinc ion binding
6 Biological Process regulation of DNA-templated transcription
7 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 322 **** 99.0 Weakly correlated
2 L2c 142 **** 99.0 Weakly correlated
3 L2b 117 **** 99.0 Weakly correlated
4 MIRb 100 ** 99.0 Weakly correlated
5 L2 95 **** 99.0 Weakly correlated
6 AluJb 70 n.s 74.0 Weakly correlated
7 MIR 68 n.s 99.0 Weakly correlated
8 AluSx 60 n.s 74.0 Weakly correlated
9 AluSx1 50 n.s 74.0 Weakly correlated
10 MIRc 49 *** 99.0 Weakly correlated
11 AluSz 46 n.s 74.0 Weakly correlated
12 MIR3 39 *** 99.0 Weakly correlated
13 AluY 38 n.s 74.0 Weakly correlated
14 AluJr 35 n.s 74.0 Weakly correlated
15 MLT1A0 32 **** 99.0 Weakly correlated
16 MSTA 32 **** 43.0 Weakly correlated
17 SVA_D 32 **** 15.2 Weakly correlated
18 AluSz6 26 n.s 74.0 Weakly correlated
19 AluJo 25 n.s 74.0 Weakly correlated
20 SVA_F 25 **** 0.0 Weakly correlated
21 SVA_A 23 **** 19.6 Weakly correlated
22 AluSq2 20 n.s 74.0 Weakly correlated
23 AluSg 17 n.s 74.0 Weakly correlated
24 L3 17 n.s 99.0 Weakly correlated
25 AluSp 14 n.s 74.0 Weakly correlated
26 AluSx3 14 n.s 74.0 Weakly correlated
27 HERVIP10FH-int 14 **** 28.9 Weakly correlated
28 AluSc 12 n.s 74.0 Weakly correlated
29 MLT1D 12 n.s 99.0 Weakly correlated
30 L1MB7 11 n.s 99.0 Weakly correlated
31 L1ME1 10 n.s 99.0 Weakly correlated
32 LTR16C 10 ** 99.0 Weakly correlated
33 MSTB 10 n.s 43.0 Weakly correlated
34 MSTB1 10 ** 74.0 Weakly correlated
35 HAL1 9 n.s 99.0 Weakly correlated
36 AluSc8 8 n.s 74.0 Weakly correlated
37 AluSq 8 n.s 74.0 Weakly correlated
38 L1ME4b 8 n.s 99.0 Weakly correlated
39 L1PA2 8 n.s 15.2 Weakly correlated
40 MIR1_Amn 8 ** 319.0 Weakly correlated
41 MLT1A1 8 * 87.0 Weakly correlated
42 SVA_B 8 **** 15.2 Weakly correlated
43 SVA_C 8 **** 15.2 Weakly correlated
44 HERVH-int 7 n.s 28.9 Weakly correlated
45 L1P3 7 n.s 74.0 Weakly correlated
46 LTR14B 7 **** 28.9 Weakly correlated
47 LTR16A1 7 *** 99.0 Weakly correlated
48 MLT1C 7 n.s 94.0 Weakly correlated
49 MLT1J2 7 * 99.0 Weakly correlated
50 SVA_E 7 **** 0.0 Weakly correlated
51 AluJr4 6 n.s 74.0 Weakly correlated
52 FLAM_C 6 n.s 74.0 Weakly correlated
53 L1M5 6 n.s 99.0 Weakly correlated
54 L1MC1 6 n.s 99.0 Weakly correlated
55 L1MEc 6 n.s 99.0 Weakly correlated
56 LTR33 6 n.s 99.0 Weakly correlated
57 LTR8 6 n.s 43.0 Weakly correlated
58 MLT1B 6 n.s 99.0 Weakly correlated
59 MLT1G3 6 ** 99.0 Weakly correlated
60 MLT1J 6 n.s 99.0 Weakly correlated
61 AluSg7 5 n.s 74.0 Weakly correlated
62 HAL1ME 5 n.s 99.0 Weakly correlated
63 L1M4 5 n.s 99.0 Weakly correlated
64 L1MC4 5 n.s 99.0 Weakly correlated
65 L1MD1 5 n.s 99.0 Weakly correlated
66 L1ME3A 5 n.s 99.0 Weakly correlated
67 L1ME4a 5 n.s 99.0 Weakly correlated
68 L1MEf 5 n.s 99.0 Weakly correlated
69 MER50 5 * 43.0 Weakly correlated
70 MLT1A 5 n.s 99.0 Weakly correlated
71 MLT1H 5 n.s 99.0 Weakly correlated
72 MSTD 5 n.s 74.0 Weakly correlated
73 THE1B 5 n.s 43.0 Weakly correlated
74 AluSg4 4 n.s 74.0 Weakly correlated
75 FRAM 4 n.s 74.0 Weakly correlated
76 L1MB5 4 n.s 99.0 Weakly correlated
77 L1MCc 4 n.s 99.0 Weakly correlated
78 L1ME3F 4 n.s 99.0 Weakly correlated
79 L1MEd 4 n.s 99.0 Weakly correlated
80 L1MEi 4 n.s 99.0 Weakly correlated
81 L1PA5 4 n.s 19.6 Weakly correlated
82 LTR10A 4 **** 28.9 Weakly correlated
83 MER57A1 4 ** 43.0 Weakly correlated
84 MLT1F 4 n.s 99.0 Weakly correlated
85 MLT1J1 4 n.s 99.0 Weakly correlated
86 MLT1K 4 n.s 99.0 Weakly correlated
87 MLT1O 4 n.s 99.0 Weakly correlated
88 THE1D 4 n.s 43.0 Weakly correlated
89 AluSc5 3 n.s 74.0 Weakly correlated
90 AmnSINE1 3 ** 319.0 Weakly correlated
91 HERVH48-int 3 ** 28.9 Weakly correlated
92 HUERS-P3-int 3 n.s 43.0 Weakly correlated
93 L1MB1 3 n.s 99.0 Weakly correlated
94 L1MB3 3 n.s 99.0 Weakly correlated
95 L1MB8 3 n.s 99.0 Weakly correlated
96 L1MC3 3 n.s 99.0 Weakly correlated
97 L1ME4c 3 n.s 99.0 Weakly correlated
98 L1MEg 3 n.s 99.0 Weakly correlated
99 L2-3_Crp 3 * 431.0 Weakly correlated
100 L3b 3 n.s 99.0 Weakly correlated
101 L4_A_Mam 3 n.s 99.0 Weakly correlated
102 LTR12C 3 n.s 19.6 Weakly correlated
103 LTR13 3 * 19.6 Weakly correlated
104 LTR16A 3 n.s 99.0 Weakly correlated
105 LTR16A2 3 * 99.0 Weakly correlated
106 LTR33A 3 * 99.0 Weakly correlated
107 LTR5A 3 ** 19.6 Weakly correlated
108 LTR5B 3 * 28.9 Weakly correlated
109 LTR75 3 *** 99.0 Weakly correlated
110 LTR78B 3 n.s 99.0 Weakly correlated
111 MER101-int 3 * 74.0 Weakly correlated
112 MER31A 3 * 87.0 Weakly correlated
113 MER50-int 3 * 43.0 Weakly correlated
114 MER57B1 3 ** 43.0 Weakly correlated
115 MER57B2 3 ** 43.0 Weakly correlated
116 MER65C 3 ** 74.0 Weakly correlated
117 MLT1F2 3 n.s 99.0 Weakly correlated
118 MLT1L 3 n.s 99.0 Weakly correlated
119 MamGypLTR3 3 *** 99.0 Weakly correlated
120 AluSx4 2 n.s 74.0 Weakly correlated
121 AluYa5 2 n.s 15.2 Weakly correlated
122 AluYc 2 n.s 74.0 Weakly correlated
123 AluYh3 2 n.s 15.2 Weakly correlated
124 AluYj4 2 n.s 0.0 Weakly correlated
125 AluYm1 2 n.s 19.6 Weakly correlated
126 FLAM_A 2 n.s 74.0 Weakly correlated
127 HERVIP10B3-int 2 n.s 28.9 Weakly correlated
128 HUERS-P3b-int 2 n.s 43.0 Weakly correlated
129 L1M4a2 2 n.s 99.0 Weakly correlated
130 L1M4b 2 n.s 99.0 Weakly correlated
131 L1M4c 2 n.s 99.0 Weakly correlated
132 L1MA4 2 n.s 87.0 Weakly correlated
133 L1MA6 2 n.s 87.0 Weakly correlated
134 L1MA7 2 n.s 87.0 Weakly correlated
135 L1MA8 2 n.s 87.0 Weakly correlated
136 L1MA9 2 n.s 99.0 Weakly correlated
137 L1MB2 2 n.s 99.0 Weakly correlated
138 L1MC 2 n.s 99.0 Weakly correlated
139 L1MC5 2 n.s 99.0 Weakly correlated
140 L1MC5a 2 n.s 99.0 Weakly correlated
141 L1MCa 2 n.s 99.0 Weakly correlated
142 L1ME5 2 n.s 99.0 Weakly correlated
143 L1MEg2 2 * 99.0 Weakly correlated
144 L1P1 2 n.s 19.6 Weakly correlated
145 L1P4a 2 n.s 74.0 Weakly correlated
146 L1PA3 2 n.s 19.6 Weakly correlated
147 L1PA8 2 n.s 74.0 Weakly correlated
148 LTR10B2 2 **** 28.9 Weakly correlated
149 LTR16B1 2 n.s 99.0 Weakly correlated
150 LTR16B2 2 n.s 99.0 Weakly correlated
151 LTR16D 2 * 99.0 Weakly correlated
152 LTR16D1 2 *** 99.0 Weakly correlated
153 LTR16E2 2 n.s 99.0 Weakly correlated
154 LTR26E 2 *** 74.0 Weakly correlated
155 LTR48 2 n.s 74.0 Weakly correlated
156 LTR50 2 n.s 99.0 Weakly correlated
157 LTR55 2 ** 99.0 Weakly correlated
158 LTR5_Hs 2 n.s 0.0 Weakly correlated
159 LTR67B 2 n.s 99.0 Weakly correlated
160 LTR75B 2 *** 99.0 Weakly correlated
161 LTR78 2 n.s 99.0 Weakly correlated
162 LTR88b 2 * 99.0 Weakly correlated
163 LTR9 2 n.s 43.0 Weakly correlated
164 MER21B 2 n.s 99.0 Weakly correlated
165 MER31B 2 n.s 99.0 Weakly correlated
166 MER4D1 2 n.s 74.0 Weakly correlated
167 MER66C 2 ** 43.0 Weakly correlated
168 MER67B 2 ** 99.0 Weakly correlated
169 MER74A 2 n.s 99.0 Weakly correlated
170 MER74B 2 * 99.0 Weakly correlated
171 MLT1E 2 * 99.0 Weakly correlated
172 MLT1E2 2 n.s 99.0 Weakly correlated
173 MLT1E3 2 n.s 99.0 Weakly correlated
174 MSTB2 2 n.s 74.0 Weakly correlated
175 MamRTE1 2 n.s 99.0 Weakly correlated
176 Alu 1 n.s 74.0 Weakly correlated
177 AluSq10 1 n.s 74.0 Weakly correlated
178 AluSq4 1 n.s 74.0 Weakly correlated
179 AluYb9 1 * 15.2 Weakly correlated
180 AluYe5 1 n.s 74.0 Weakly correlated
181 AluYg6 1 n.s 15.2 Weakly correlated
182 AluYh3a3 1 * 15.2 Weakly correlated
183 AluYh9 1 *** 15.2 Weakly correlated
184 AluYk2 1 n.s 19.6 Weakly correlated
185 CR1-16_AMi 1 * 319.0 Weakly correlated
186 CR1-3_Croc 1 n.s 319.0 Weakly correlated
187 CR1_Mam 1 n.s 99.0 Weakly correlated
188 ERV24B_Prim-int 1 n.s 74.0 Weakly correlated
189 ERV3-16A3_I-int 1 n.s 99.0 Weakly correlated
190 ERVL-B4-int 1 n.s 99.0 Weakly correlated
191 ERVL-E-int 1 n.s 99.0 Weakly correlated
192 HERV35I-int 1 n.s 43.0 Weakly correlated
193 HERV9NC-int 1 n.s 19.6 Weakly correlated
194 HERVK22-int 1 n.s 43.0 Weakly correlated
195 HERVS71-int 1 n.s 28.9 Weakly correlated
196 Harlequin-int 1 n.s 74.0 Weakly correlated
197 L1M1 1 n.s 74.0 Weakly correlated
198 L1M2 1 n.s 99.0 Weakly correlated
199 L1M2a 1 n.s 87.0 Weakly correlated
200 L1M3b 1 n.s 99.0 Weakly correlated
201 L1M4a1 1 n.s 99.0 Weakly correlated
202 L1M6 1 n.s 99.0 Weakly correlated
203 L1M7 1 n.s 99.0 Weakly correlated
204 L1MA10 1 n.s 99.0 Weakly correlated
205 L1MA2 1 n.s 74.0 Weakly correlated
206 L1MA3 1 n.s 74.0 Weakly correlated
207 L1MA5 1 n.s 87.0 Weakly correlated
208 L1MB4 1 n.s 99.0 Weakly correlated
209 L1MC4a 1 n.s 99.0 Weakly correlated
210 L1MCb 1 n.s 99.0 Weakly correlated
211 L1MD2 1 n.s 99.0 Weakly correlated
212 L1MDa 1 n.s 99.0 Weakly correlated
213 L1MDb 1 n.s 99.0 Weakly correlated
214 L1ME2 1 n.s 99.0 Weakly correlated
215 L1ME3 1 n.s 99.0 Weakly correlated
216 L1ME3B 1 n.s 99.0 Weakly correlated
217 L1ME3Cz 1 n.s 99.0 Weakly correlated
218 L1ME3D 1 n.s 99.0 Weakly correlated
219 L1ME3G 1 n.s 99.0 Weakly correlated
220 L1MEb 1 n.s 99.0 Weakly correlated
221 L1P2 1 n.s 28.9 Weakly correlated
222 L1P4 1 n.s 74.0 Weakly correlated
223 L1PA13 1 n.s 74.0 Weakly correlated
224 L1PA15 1 n.s 74.0 Weakly correlated
225 L1PA4 1 n.s 19.6 Weakly correlated
226 L1PA7 1 n.s 74.0 Weakly correlated
227 L1PB4 1 n.s 99.0 Weakly correlated
228 L1PREC2 1 n.s 43.0 Weakly correlated
229 L4_B_Mam 1 n.s 99.0 Weakly correlated
230 LOR1a 1 n.s 74.0 Weakly correlated
231 LTR1 1 * 43.0 Weakly correlated
232 LTR103_Mam 1 * 99.0 Weakly correlated
233 LTR104_Mam 1 n.s 99.0 Weakly correlated
234 LTR10B1 1 ** 28.9 Weakly correlated
235 LTR12_ 1 n.s 28.9 Weakly correlated
236 LTR16 1 n.s 99.0 Weakly correlated
237 LTR16E1 1 n.s 99.0 Weakly correlated
238 LTR1D 1 n.s 43.0 Weakly correlated
239 LTR26C 1 * 0.0 Weakly correlated
240 LTR27C 1 * 43.0 Weakly correlated
241 LTR33A_ 1 n.s 99.0 Weakly correlated
242 LTR33C 1 n.s 99.0 Weakly correlated
243 LTR35A 1 ** 43.0 Weakly correlated
244 LTR36 1 n.s 74.0 Weakly correlated
245 LTR37B 1 n.s 99.0 Weakly correlated
246 LTR40b 1 n.s 99.0 Weakly correlated
247 LTR41B 1 n.s 99.0 Weakly correlated
248 LTR41C 1 n.s 99.0 Weakly correlated
249 LTR43 1 n.s 74.0 Weakly correlated
250 LTR45B 1 * 74.0 Weakly correlated
251 LTR49 1 n.s 74.0 Weakly correlated
252 LTR54 1 n.s 74.0 Weakly correlated
253 LTR56 1 n.s 74.0 Weakly correlated
254 LTR68 1 * 99.0 Weakly correlated
255 LTR7 1 n.s 19.6 Weakly correlated
256 LTR82A 1 n.s 99.0 Weakly correlated
257 LTR85a 1 n.s 99.0 Weakly correlated
258 LTR85b 1 n.s 99.0 Weakly correlated
259 LTR88a 1 * 99.0 Weakly correlated
260 LTR8A 1 n.s 43.0 Weakly correlated
261 LTR91 1 ** 99.0 Weakly correlated
262 LTR9B 1 n.s 43.0 Weakly correlated
263 LTR9C 1 * 43.0 Weakly correlated
264 LTR9D 1 n.s 43.0 Weakly correlated
265 MER21A 1 n.s 74.0 Weakly correlated
266 MER21C 1 n.s 99.0 Weakly correlated
267 MER31-int 1 n.s 99.0 Weakly correlated
268 MER34A1 1 n.s 99.0 Weakly correlated
269 MER34C2 1 n.s 74.0 Weakly correlated
270 MER39 1 n.s 74.0 Weakly correlated
271 MER39B 1 n.s 74.0 Weakly correlated
272 MER41A 1 n.s 74.0 Weakly correlated
273 MER41D 1 * 74.0 Weakly correlated
274 MER49 1 n.s 43.0 Weakly correlated
275 MER51A 1 n.s 43.0 Weakly correlated
276 MER57A-int 1 n.s 43.0 Weakly correlated
277 MER57C1 1 ** 74.0 Weakly correlated
278 MER57D 1 * 87.0 Weakly correlated
279 MER57E1 1 * 87.0 Weakly correlated
280 MER61A 1 n.s 43.0 Weakly correlated
281 MER66A 1 * 43.0 Weakly correlated
282 MER66B 1 n.s 43.0 Weakly correlated
283 MER67A 1 * 99.0 Weakly correlated
284 MLT1E1 1 n.s 99.0 Weakly correlated
285 MLT1F1 1 n.s 99.0 Weakly correlated
286 MLT1G 1 n.s 99.0 Weakly correlated
287 MLT1H2 1 n.s 99.0 Weakly correlated
288 MLT1I 1 n.s 99.0 Weakly correlated
289 MLT1N2 1 n.s 99.0 Weakly correlated
290 MLT2B1 1 n.s 99.0 Weakly correlated
291 MLT2D 1 n.s 99.0 Weakly correlated
292 MSTA-int 1 n.s 43.0 Weakly correlated
293 MSTA1 1 n.s 74.0 Weakly correlated
294 MSTC 1 n.s 74.0 Weakly correlated
295 MamGypsy2-I 1 n.s 99.0 Weakly correlated
296 Plat_L3 1 n.s 99.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 261 **** 99.0 Weakly correlated
2 L2c 96 **** 99.0 Weakly correlated
3 L2b 78 **** 99.0 Weakly correlated
4 L2 61 **** 99.0 Weakly correlated
5 SVA_D 32 **** 15.2 Weakly correlated
6 MLT1A0 29 **** 99.0 Weakly correlated
7 MSTA 29 *** 43.0 Weakly correlated
8 MIR 26 n.s 99.0 Weakly correlated
9 MIRb 25 n.s 99.0 Weakly correlated
10 AluJb 23 n.s 74.0 Weakly correlated
11 SVA_F 22 **** 0.0 Weakly correlated
12 MIRc 21 n.s 99.0 Weakly correlated
13 SVA_A 20 **** 19.6 Weakly correlated
14 AluSx 16 n.s 74.0 Weakly correlated
15 AluJr 13 n.s 74.0 Weakly correlated
16 AluSz 13 n.s 74.0 Weakly correlated
17 HERVIP10FH-int 13 **** 28.9 Weakly correlated
18 MLT1D 12 n.s 99.0 Weakly correlated
19 AluSx1 11 n.s 74.0 Weakly correlated
20 MIR3 11 n.s 99.0 Weakly correlated
21 AluJo 9 n.s 74.0 Weakly correlated
22 AluSz6 9 n.s 74.0 Weakly correlated
23 MSTB 9 n.s 43.0 Weakly correlated
24 MSTB1 9 ** 74.0 Weakly correlated
25 AluSq2 8 n.s 74.0 Weakly correlated
26 AluSx3 8 n.s 74.0 Weakly correlated
27 L3 8 n.s 99.0 Weakly correlated
28 LTR16C 8 * 99.0 Weakly correlated
29 SVA_B 8 **** 15.2 Weakly correlated
30 SVA_C 8 **** 15.2 Weakly correlated
31 AluY 7 n.s 74.0 Weakly correlated
32 MLT1A1 7 n.s 87.0 Weakly correlated
33 HERVH-int 6 n.s 28.9 Weakly correlated
34 L1ME1 6 n.s 99.0 Weakly correlated
35 SVA_E 6 **** 0.0 Weakly correlated
36 AluSg 5 n.s 74.0 Weakly correlated
37 HAL1 5 n.s 99.0 Weakly correlated
38 L1MB7 5 n.s 99.0 Weakly correlated
39 AluSq 4 n.s 74.0 Weakly correlated
40 L1M5 4 n.s 99.0 Weakly correlated
41 L1PA2 4 n.s 15.2 Weakly correlated
42 LTR16A1 4 * 99.0 Weakly correlated
43 MER57A1 4 ** 43.0 Weakly correlated
44 MLT1A 4 n.s 99.0 Weakly correlated
45 MLT1B 4 n.s 99.0 Weakly correlated
46 MLT1H 4 n.s 99.0 Weakly correlated
47 MLT1J2 4 n.s 99.0 Weakly correlated
48 MSTD 4 n.s 74.0 Weakly correlated
49 THE1D 4 n.s 43.0 Weakly correlated
50 AluJr4 3 n.s 74.0 Weakly correlated
51 AluSp 3 n.s 74.0 Weakly correlated
52 HERVH48-int 3 ** 28.9 Weakly correlated
53 L1MC1 3 n.s 99.0 Weakly correlated
54 L1MC3 3 n.s 99.0 Weakly correlated
55 L1MCc 3 n.s 99.0 Weakly correlated
56 L1ME4b 3 n.s 99.0 Weakly correlated
57 L1MEc 3 n.s 99.0 Weakly correlated
58 L1MEf 3 n.s 99.0 Weakly correlated
59 LTR12C 3 n.s 19.6 Weakly correlated
60 LTR16A 3 n.s 99.0 Weakly correlated
61 LTR33 3 n.s 99.0 Weakly correlated
62 LTR5A 3 ** 19.6 Weakly correlated
63 LTR5B 3 * 28.9 Weakly correlated
64 LTR78B 3 n.s 99.0 Weakly correlated
65 MER50 3 n.s 43.0 Weakly correlated
66 MER50-int 3 * 43.0 Weakly correlated
67 MER57B2 3 ** 43.0 Weakly correlated
68 MER65C 3 ** 74.0 Weakly correlated
69 MIR1_Amn 3 n.s 319.0 Weakly correlated
70 MLT1G3 3 n.s 99.0 Weakly correlated
71 MLT1J1 3 n.s 99.0 Weakly correlated
72 AluSg7 2 n.s 74.0 Weakly correlated
73 FLAM_A 2 n.s 74.0 Weakly correlated
74 HAL1ME 2 n.s 99.0 Weakly correlated
75 HUERS-P3-int 2 n.s 43.0 Weakly correlated
76 HUERS-P3b-int 2 n.s 43.0 Weakly correlated
77 L1MA7 2 n.s 87.0 Weakly correlated
78 L1MB2 2 n.s 99.0 Weakly correlated
79 L1MC5 2 n.s 99.0 Weakly correlated
80 L1MD1 2 n.s 99.0 Weakly correlated
81 L1ME2 2 n.s 99.0 Weakly correlated
82 L1MEd 2 n.s 99.0 Weakly correlated
83 L1MEg 2 n.s 99.0 Weakly correlated
84 L1MEg2 2 * 99.0 Weakly correlated
85 L1P4a 2 n.s 74.0 Weakly correlated
86 L1PA8 2 n.s 74.0 Weakly correlated
87 L3b 2 n.s 99.0 Weakly correlated
88 LTR13 2 n.s 19.6 Weakly correlated
89 LTR16B1 2 n.s 99.0 Weakly correlated
90 LTR16D1 2 *** 99.0 Weakly correlated
91 LTR16E2 2 n.s 99.0 Weakly correlated
92 LTR26E 2 *** 74.0 Weakly correlated
93 LTR48 2 n.s 74.0 Weakly correlated
94 LTR67B 2 n.s 99.0 Weakly correlated
95 LTR78 2 n.s 99.0 Weakly correlated
96 MER101-int 2 n.s 74.0 Weakly correlated
97 MER31A 2 n.s 87.0 Weakly correlated
98 MER31B 2 n.s 99.0 Weakly correlated
99 MER57B1 2 * 43.0 Weakly correlated
100 MLT1C 2 n.s 94.0 Weakly correlated
101 MLT1E 2 * 99.0 Weakly correlated
102 MLT1E3 2 n.s 99.0 Weakly correlated
103 MLT1F 2 n.s 99.0 Weakly correlated
104 MLT1F2 2 n.s 99.0 Weakly correlated
105 MLT1K 2 n.s 99.0 Weakly correlated
106 MSTB2 2 n.s 74.0 Weakly correlated
107 THE1B 2 n.s 43.0 Weakly correlated
108 AluSc 1 n.s 74.0 Weakly correlated
109 AluSc8 1 n.s 74.0 Weakly correlated
110 AluSq10 1 n.s 74.0 Weakly correlated
111 AluSx4 1 n.s 74.0 Weakly correlated
112 AluYc 1 n.s 74.0 Weakly correlated
113 AluYh3 1 n.s 15.2 Weakly correlated
114 AmnSINE1 1 n.s 319.0 Weakly correlated
115 CR1-16_AMi 1 * 319.0 Weakly correlated
116 FLAM_C 1 n.s 74.0 Weakly correlated
117 FRAM 1 n.s 74.0 Weakly correlated
118 HERV35I-int 1 n.s 43.0 Weakly correlated
119 HERVIP10B3-int 1 n.s 28.9 Weakly correlated
120 HERVK22-int 1 n.s 43.0 Weakly correlated
121 HERVS71-int 1 n.s 28.9 Weakly correlated
122 Harlequin-int 1 n.s 74.0 Weakly correlated
123 L1M1 1 n.s 74.0 Weakly correlated
124 L1M4 1 n.s 99.0 Weakly correlated
125 L1M4a1 1 n.s 99.0 Weakly correlated
126 L1M6 1 n.s 99.0 Weakly correlated
127 L1MA2 1 n.s 74.0 Weakly correlated
128 L1MA4 1 n.s 87.0 Weakly correlated
129 L1MA5 1 n.s 87.0 Weakly correlated
130 L1MA6 1 n.s 87.0 Weakly correlated
131 L1MB1 1 n.s 99.0 Weakly correlated
132 L1MB3 1 n.s 99.0 Weakly correlated
133 L1MB4 1 n.s 99.0 Weakly correlated
134 L1MB8 1 n.s 99.0 Weakly correlated
135 L1MC 1 n.s 99.0 Weakly correlated
136 L1MC4a 1 n.s 99.0 Weakly correlated
137 L1MC5a 1 n.s 99.0 Weakly correlated
138 L1MCa 1 n.s 99.0 Weakly correlated
139 L1MCb 1 n.s 99.0 Weakly correlated
140 L1MDb 1 n.s 99.0 Weakly correlated
141 L1ME3 1 n.s 99.0 Weakly correlated
142 L1ME3A 1 n.s 99.0 Weakly correlated
143 L1ME3Cz 1 n.s 99.0 Weakly correlated
144 L1ME3F 1 n.s 99.0 Weakly correlated
145 L1ME4a 1 n.s 99.0 Weakly correlated
146 L1ME5 1 n.s 99.0 Weakly correlated
147 L1MEb 1 n.s 99.0 Weakly correlated
148 L1MEi 1 n.s 99.0 Weakly correlated
149 L1P3 1 n.s 74.0 Weakly correlated
150 L1PA13 1 n.s 74.0 Weakly correlated
151 L1PA15 1 n.s 74.0 Weakly correlated
152 L1PA3 1 n.s 19.6 Weakly correlated
153 L1PA7 1 n.s 74.0 Weakly correlated
154 L2-3_Crp 1 n.s 431.0 Weakly correlated
155 L4_A_Mam 1 n.s 99.0 Weakly correlated
156 L4_B_Mam 1 n.s 99.0 Weakly correlated
157 LTR103_Mam 1 * 99.0 Weakly correlated
158 LTR104_Mam 1 n.s 99.0 Weakly correlated
159 LTR10B2 1 ** 28.9 Weakly correlated
160 LTR16 1 n.s 99.0 Weakly correlated
161 LTR16A2 1 n.s 99.0 Weakly correlated
162 LTR16D 1 n.s 99.0 Weakly correlated
163 LTR16E1 1 n.s 99.0 Weakly correlated
164 LTR1D 1 n.s 43.0 Weakly correlated
165 LTR26C 1 * 0.0 Weakly correlated
166 LTR33A 1 n.s 99.0 Weakly correlated
167 LTR33A_ 1 n.s 99.0 Weakly correlated
168 LTR33C 1 n.s 99.0 Weakly correlated
169 LTR35A 1 ** 43.0 Weakly correlated
170 LTR36 1 n.s 74.0 Weakly correlated
171 LTR43 1 n.s 74.0 Weakly correlated
172 LTR45B 1 * 74.0 Weakly correlated
173 LTR49 1 n.s 74.0 Weakly correlated
174 LTR50 1 n.s 99.0 Weakly correlated
175 LTR55 1 * 99.0 Weakly correlated
176 LTR56 1 n.s 74.0 Weakly correlated
177 LTR5_Hs 1 n.s 0.0 Weakly correlated
178 LTR68 1 * 99.0 Weakly correlated
179 LTR7 1 n.s 19.6 Weakly correlated
180 LTR75 1 * 99.0 Weakly correlated
181 LTR85b 1 n.s 99.0 Weakly correlated
182 LTR88b 1 n.s 99.0 Weakly correlated
183 LTR9 1 n.s 43.0 Weakly correlated
184 LTR9C 1 * 43.0 Weakly correlated
185 LTR9D 1 n.s 43.0 Weakly correlated
186 MER21A 1 n.s 74.0 Weakly correlated
187 MER21C 1 n.s 99.0 Weakly correlated
188 MER34C2 1 n.s 74.0 Weakly correlated
189 MER49 1 n.s 43.0 Weakly correlated
190 MER51A 1 n.s 43.0 Weakly correlated
191 MER57A-int 1 n.s 43.0 Weakly correlated
192 MER57C1 1 ** 74.0 Weakly correlated
193 MER57E1 1 * 87.0 Weakly correlated
194 MER61A 1 n.s 43.0 Weakly correlated
195 MER66A 1 * 43.0 Weakly correlated
196 MER67A 1 * 99.0 Weakly correlated
197 MER67B 1 n.s 99.0 Weakly correlated
198 MER74A 1 n.s 99.0 Weakly correlated
199 MER74B 1 n.s 99.0 Weakly correlated
200 MLT1E1 1 n.s 99.0 Weakly correlated
201 MLT1E2 1 n.s 99.0 Weakly correlated
202 MLT1H2 1 n.s 99.0 Weakly correlated
203 MLT1J 1 n.s 99.0 Weakly correlated
204 MLT1O 1 n.s 99.0 Weakly correlated
205 MLT2D 1 n.s 99.0 Weakly correlated
206 MSTA-int 1 n.s 43.0 Weakly correlated
207 MSTA1 1 n.s 74.0 Weakly correlated
208 MSTC 1 n.s 74.0 Weakly correlated
209 MamGypLTR3 1 * 99.0 Weakly correlated
210 MamRTE1 1 n.s 99.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUJB 74.0 Weakly correlated
2 ALUJO 74.0 Weakly correlated
3 ALUJR 74.0 Weakly correlated
4 ALUSX3 74.0 Weakly correlated
5 ALUSZ6 74.0 Weakly correlated
6 ALUY 74.0 Weakly correlated
7 HERVIP10FH-INT 28.9 Weakly correlated
8 L1ME1 99.0 Weakly correlated
9 L3 99.0 Weakly correlated
10 MLT1A0 99.0 Weakly correlated
11 MLT1A1 87.0 Weakly correlated
12 MSTA 43.0 Weakly correlated
13 MSTB 43.0 Weakly correlated
14 MSTB1 74.0 Weakly correlated
15 SVA_A 19.6 Weakly correlated
16 SVA_B 15.2 Weakly correlated
17 SVA_C 15.2 Weakly correlated
18 SVA_D 15.2 Weakly correlated
19 SVA_E 0.0 Weakly correlated
20 SVA_F 0.0 Weakly correlated