ZRdb KZFP & Repeats
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Human_ZNF792

  • Protein
    Zinc finger protein 792
  • Length
    632
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    94.0 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MAAAALRDPAQGCVTFEDVTIYFSQEEWVLLDEAQRLLYCDVMLENFALIASLGLISFRSHIVSQLEMGKEPWVPDSVDMTSAMARGAYGRPGSDFCHGTEGKDLPSEHNVSVEGVAQDRSPEATLCPQKTCPCDICGLRLKDILHLAEHQTTHPRQKPFVCEAYVKGSEFSANLPRKQVQQNVHNPIRTEEGQASPVKTCRDHTSDQLSTCREGGKDFVATAGFLQCEVTPSDGEPHEATEGVVDFHIALRHNKCCESGDAFNNKSTLVQHQRIHSRERPYECSKCGIFFTYAADLTQHQKVHNRGKPYECCECGKFFSQHSSLVKHRRVHTGESPHVCGDCGKFFSRSSNLIQHKRVHTGEKPYECSDCGKFFSQRSNLIHHKRVHTGRSAHECSECGKSFNCNSSLIKHWRVHTGERPYKCNECGKFFSHIASLIQHQIVHTGERPHGCGECGKAFSRSSDLMKHQRVHTGERPYECNECGKLFSQSSSLNSHRRLHTGERPYQCSECGKFFNQSSSLNNHRRLHTGERPYECSECGKTFRQRSNLRQHLKVHKPDRPYECSECGKAFNQRPTLIRHQKIHIRERSMENVLLPCSQHTPEISSENRPYQGAVNYKLKLVHPSTHPGEVP
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 14..85
2 C2h2 132..154
3 dec2h2 254..276
4 C2h2 282..304
5 C2h2 310..332
6 C2h2 338..360
7 C2h2 366..388
8 C2h2 394..416
9 C2h2 422..444
10 C2h2 450..472
11 C2h2 478..500
12 C2h2 506..528
13 C2h2 534..556
14 C2h2 562..584
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function identical protein binding
4 Molecular Function metal ion binding
5 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
6 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2b 520 **** 99.0 Moderately correlated
2 MIRb 490 **** 99.0 Moderately correlated
3 AluSx1 460 **** 74.0 Weakly correlated
4 AluSx 444 **** 74.0 Weakly correlated
5 L2a 441 **** 99.0 Moderately correlated
6 L2c 363 **** 99.0 Moderately correlated
7 MIR 347 **** 99.0 Moderately correlated
8 AluSz 288 **** 74.0 Weakly correlated
9 AluJb 281 *** 74.0 Weakly correlated
10 AluY 259 * 74.0 Weakly correlated
11 AluSq2 228 **** 74.0 Weakly correlated
12 MIRc 226 **** 99.0 Moderately correlated
13 AluSp 188 **** 74.0 Weakly correlated
14 MIR3 174 **** 99.0 Moderately correlated
15 AluJo 168 *** 74.0 Weakly correlated
16 AluSg 155 **** 74.0 Weakly correlated
17 AluJr 151 n.s 74.0 Weakly correlated
18 L2 148 *** 99.0 Moderately correlated
19 AluSx3 141 **** 74.0 Weakly correlated
20 AluSz6 104 n.s 74.0 Weakly correlated
21 AluSc 91 ** 74.0 Weakly correlated
22 MER89 88 **** 99.0 Moderately correlated
23 AluSq 69 **** 74.0 Weakly correlated
24 AluSc8 67 *** 74.0 Weakly correlated
25 L1PA2 52 n.s 15.2 Weakly correlated
26 FLAM_C 48 **** 74.0 Weakly correlated
27 AluSx4 42 **** 74.0 Weakly correlated
28 LTR8 41 **** 43.0 Weakly correlated
29 L1MC4 38 n.s 99.0 Moderately correlated
30 AluSg7 37 **** 74.0 Weakly correlated
31 MIR1_Amn 34 **** 319.0 Weakly correlated
32 L3 33 n.s 99.0 Moderately correlated
33 L1PA3 32 n.s 19.6 Weakly correlated
34 AluSg4 28 *** 74.0 Weakly correlated
35 FRAM 28 **** 74.0 Weakly correlated
36 AluYj4 24 **** 0.0 Weakly correlated
37 L1M5 24 n.s 99.0 Moderately correlated
38 LTR10A 24 **** 28.9 Weakly correlated
39 MamRTE1 24 **** 99.0 Moderately correlated
40 L1MEc 23 n.s 99.0 Moderately correlated
41 MLT1H 22 n.s 99.0 Moderately correlated
42 HAL1 21 n.s 99.0 Moderately correlated
43 AluSc5 20 * 74.0 Weakly correlated
44 AluYc 20 **** 74.0 Weakly correlated
45 L1MB3 20 n.s 99.0 Moderately correlated
46 L1M4 19 n.s 99.0 Moderately correlated
47 PRIMA4-int 19 **** 74.0 Weakly correlated
48 L1MEd 18 n.s 99.0 Moderately correlated
49 MLT1K 18 n.s 99.0 Moderately correlated
50 AluJr4 17 n.s 74.0 Weakly correlated
51 L1MB8 17 n.s 99.0 Moderately correlated
52 MER4-int 17 n.s 74.0 Weakly correlated
53 MLT1B 17 n.s 99.0 Moderately correlated
54 Alu 16 **** 74.0 Weakly correlated
55 HERVIP10FH-int 16 **** 28.9 Weakly correlated
56 L1PA5 16 n.s 19.6 Weakly correlated
57 L3b 16 * 99.0 Moderately correlated
58 LTR10F 16 **** 28.9 Weakly correlated
59 MSTD 15 n.s 74.0 Weakly correlated
60 L1ME3G 14 n.s 99.0 Moderately correlated
61 MER50 14 * 43.0 Weakly correlated
62 AluSq10 13 **** 74.0 Weakly correlated
63 HAL1b 13 n.s 99.0 Moderately correlated
64 MLT1I 13 n.s 99.0 Moderately correlated
65 HUERS-P3-int 12 *** 43.0 Weakly correlated
66 L1M1 12 n.s 74.0 Weakly correlated
67 L1MC5a 12 n.s 99.0 Moderately correlated
68 L1ME1 12 n.s 99.0 Moderately correlated
69 L1ME3A 12 n.s 99.0 Moderately correlated
70 L1ME4a 12 n.s 99.0 Moderately correlated
71 L1PB1 12 n.s 74.0 Weakly correlated
72 MLT1C 12 n.s 94.0 Highly correlated
73 AluYa5 11 n.s 15.2 Weakly correlated
74 ERVL-E-int 11 n.s 99.0 Moderately correlated
75 FLAM_A 11 n.s 74.0 Weakly correlated
76 L1MB7 11 n.s 99.0 Moderately correlated
77 LTR41 11 **** 99.0 Moderately correlated
78 LTR41C 11 **** 99.0 Moderately correlated
79 AluYm1 10 n.s 19.6 Weakly correlated
80 HERV17-int 10 * 28.9 Weakly correlated
81 L1MA4 10 n.s 87.0 Weakly correlated
82 L1ME3B 10 n.s 99.0 Moderately correlated
83 L1ME4c 10 n.s 99.0 Moderately correlated
84 L1P3 10 n.s 74.0 Weakly correlated
85 L1P4 10 n.s 74.0 Weakly correlated
86 LTR13 10 *** 19.6 Weakly correlated
87 MLT1D 10 n.s 99.0 Moderately correlated
88 MamGypLTR3 10 **** 99.0 Moderately correlated
89 ERVL-B4-int 9 n.s 99.0 Moderately correlated
90 L1MD2 9 n.s 99.0 Moderately correlated
91 L1MD3 9 n.s 99.0 Moderately correlated
92 L1ME3Cz 9 n.s 99.0 Moderately correlated
93 L1P1 9 n.s 19.6 Weakly correlated
94 L1PA4 9 n.s 19.6 Weakly correlated
95 MLT1A0 9 n.s 99.0 Moderately correlated
96 MLT1E2 9 n.s 99.0 Moderately correlated
97 HERVH48-int 8 **** 28.9 Weakly correlated
98 L1MA9 8 n.s 99.0 Moderately correlated
99 L1PA8 8 n.s 74.0 Weakly correlated
100 LTR41B 8 *** 99.0 Moderately correlated
101 AluSq4 7 * 74.0 Weakly correlated
102 AluYb8 7 n.s 15.2 Weakly correlated
103 HUERS-P3b-int 7 * 43.0 Weakly correlated
104 L1MC1 7 n.s 99.0 Moderately correlated
105 L1MC5 7 n.s 99.0 Moderately correlated
106 L1MD 7 n.s 99.0 Moderately correlated
107 L1ME2 7 n.s 99.0 Moderately correlated
108 L1MEf 7 n.s 99.0 Moderately correlated
109 L1PA15 7 n.s 74.0 Weakly correlated
110 L1PA17 7 n.s 74.0 Weakly correlated
111 L1PREC2 7 n.s 43.0 Weakly correlated
112 MLT2C1 7 n.s 99.0 Moderately correlated
113 MLT2D 7 n.s 99.0 Moderately correlated
114 MamSINE1 7 n.s 99.0 Moderately correlated
115 AluYf1 6 n.s 19.6 Weakly correlated
116 ERV3-16A3_I-int 6 n.s 99.0 Moderately correlated
117 HERVH-int 6 n.s 28.9 Weakly correlated
118 L1MB2 6 n.s 99.0 Moderately correlated
119 L1MDa 6 n.s 99.0 Moderately correlated
120 L1MEg 6 n.s 99.0 Moderately correlated
121 LTR16A1 6 n.s 99.0 Moderately correlated
122 MER50-int 6 * 43.0 Weakly correlated
123 MLT1F2 6 n.s 99.0 Moderately correlated
124 MLT1H2 6 n.s 99.0 Moderately correlated
125 MLT1N2 6 n.s 99.0 Moderately correlated
126 MLT2B4 6 n.s 99.0 Moderately correlated
127 AmnSINE1 5 * 319.0 Weakly correlated
128 L1HS 5 n.s 8.6 Weakly correlated
129 L1M3e 5 n.s 99.0 Moderately correlated
130 L1M4b 5 n.s 99.0 Moderately correlated
131 L1ME3 5 n.s 99.0 Moderately correlated
132 L1ME4b 5 n.s 99.0 Moderately correlated
133 L1PA13 5 n.s 74.0 Weakly correlated
134 L1PA7 5 n.s 74.0 Weakly correlated
135 L1PB3 5 n.s 74.0 Weakly correlated
136 L2-3_Crp 5 n.s 431.0 Weakly correlated
137 LTR18B 5 *** 43.0 Weakly correlated
138 LTR33A 5 n.s 99.0 Moderately correlated
139 LTR71B 5 *** 43.0 Weakly correlated
140 LTR72 5 **** 74.0 Weakly correlated
141 LTR8B 5 n.s 43.0 Weakly correlated
142 MER41B 5 n.s 74.0 Weakly correlated
143 MER52D 5 n.s 74.0 Weakly correlated
144 MER54B 5 ** 87.0 Weakly correlated
145 MLT1A 5 n.s 99.0 Moderately correlated
146 MLT1G1 5 n.s 99.0 Moderately correlated
147 MLT1J 5 n.s 99.0 Moderately correlated
148 MLT1L 5 n.s 99.0 Moderately correlated
149 SVA_A 5 n.s 19.6 Weakly correlated
150 AluYa8 4 **** 15.2 Weakly correlated
151 HAL1M8 4 n.s 99.0 Moderately correlated
152 L1M3 4 n.s 99.0 Moderately correlated
153 L1MA7 4 n.s 87.0 Weakly correlated
154 L1MB1 4 n.s 99.0 Moderately correlated
155 L1MB5 4 n.s 99.0 Moderately correlated
156 L1ME2z 4 n.s 99.0 Moderately correlated
157 L1ME5 4 n.s 99.0 Moderately correlated
158 L1MEi 4 n.s 99.0 Moderately correlated
159 L1PA16 4 n.s 74.0 Weakly correlated
160 L1PB 4 n.s 74.0 Weakly correlated
161 LFSINE_Vert 4 * 319.0 Weakly correlated
162 LTR16 4 n.s 99.0 Moderately correlated
163 LTR16A 4 n.s 99.0 Moderately correlated
164 LTR16C 4 n.s 99.0 Moderately correlated
165 LTR22B 4 *** 28.9 Weakly correlated
166 LTR33 4 n.s 99.0 Moderately correlated
167 LTR3B 4 **** 28.9 Weakly correlated
168 LTR40c 4 * 99.0 Moderately correlated
169 LTR50 4 n.s 99.0 Moderately correlated
170 MER49 4 n.s 43.0 Weakly correlated
171 MER66B 4 n.s 43.0 Weakly correlated
172 MER74A 4 n.s 99.0 Moderately correlated
173 MLT1F1 4 n.s 99.0 Moderately correlated
174 MLT1G3 4 n.s 99.0 Moderately correlated
175 MLT1M 4 n.s 99.0 Moderately correlated
176 SVA_E 4 n.s 0.0 Weakly correlated
177 X6A_LINE 4 ** 99.0 Moderately correlated
178 AluYe5 3 n.s 74.0 Weakly correlated
179 AluYh3 3 n.s 15.2 Weakly correlated
180 AluYh3a3 3 ** 15.2 Weakly correlated
181 AluYh9 3 **** 15.2 Weakly correlated
182 AluYk3 3 n.s 19.6 Weakly correlated
183 ERV24_Prim-int 3 n.s 74.0 Weakly correlated
184 FAM 3 n.s 87.0 Weakly correlated
185 HAL1ME 3 n.s 99.0 Moderately correlated
186 HERV15-int 3 * 28.9 Weakly correlated
187 HERVFH21-int 3 * 28.9 Weakly correlated
188 L1M2 3 n.s 99.0 Moderately correlated
189 L1MA5 3 n.s 87.0 Weakly correlated
190 L1MA6 3 n.s 87.0 Weakly correlated
191 L1MC3 3 n.s 99.0 Moderately correlated
192 L1MD1 3 n.s 99.0 Moderately correlated
193 L1MDb 3 n.s 99.0 Moderately correlated
194 L1P4a 3 n.s 74.0 Weakly correlated
195 L1PB4 3 n.s 99.0 Moderately correlated
196 L4_A_Mam 3 n.s 99.0 Moderately correlated
197 L4_C_Mam 3 n.s 99.0 Moderately correlated
198 LTR18A 3 *** 43.0 Weakly correlated
199 LTR1A2 3 n.s 43.0 Weakly correlated
200 LTR26D 3 ** 0.0 Weakly correlated
201 LTR3B_ 3 ** 28.9 Weakly correlated
202 LTR43 3 * 74.0 Weakly correlated
203 LTR48 3 n.s 74.0 Weakly correlated
204 LTR65 3 * 99.0 Moderately correlated
205 LTR7 3 n.s 19.6 Weakly correlated
206 MER21C 3 n.s 99.0 Moderately correlated
207 MER34C2 3 * 74.0 Weakly correlated
208 MER39 3 n.s 74.0 Weakly correlated
209 MER39B 3 n.s 74.0 Weakly correlated
210 MER4A 3 n.s 74.0 Weakly correlated
211 MER52C 3 n.s 74.0 Weakly correlated
212 MER61B 3 * 43.0 Weakly correlated
213 MLT1A1 3 n.s 87.0 Weakly correlated
214 MLT1F 3 n.s 99.0 Moderately correlated
215 MLT1J2 3 n.s 99.0 Moderately correlated
216 MLT1O 3 n.s 99.0 Moderately correlated
217 MLT2B1 3 n.s 99.0 Moderately correlated
218 MamRep1151 3 n.s 99.0 Moderately correlated
219 MamRep605 3 n.s 99.0 Moderately correlated
220 Plat_L3 3 n.s 99.0 Moderately correlated
221 PrimLTR79 3 *** 74.0 Weakly correlated
222 THE1D 3 n.s 43.0 Weakly correlated
223 X7A_LINE 3 * 319.0 Weakly correlated
224 AluYc3 2 n.s 74.0 Weakly correlated
225 AluYi6 2 * 15.2 Weakly correlated
226 AluYk11 2 * 15.2 Weakly correlated
227 AluYk12 2 ** 15.2 Weakly correlated
228 AluYk2 2 n.s 19.6 Weakly correlated
229 CR1_Mam 2 n.s 99.0 Moderately correlated
230 ERV24B_Prim-int 2 n.s 74.0 Weakly correlated
231 ERV3-16A3_LTR 2 n.s 99.0 Moderately correlated
232 ERVL-int 2 n.s 99.0 Moderately correlated
233 HERV9-int 2 n.s 28.9 Weakly correlated
234 HERV9N-int 2 n.s 19.6 Weakly correlated
235 HERVIP10F-int 2 n.s 28.9 Weakly correlated
236 HERVL40-int 2 n.s 99.0 Moderately correlated
237 HERVL74-int 2 n.s 99.0 Moderately correlated
238 L1M 2 * 74.0 Weakly correlated
239 L1M3f 2 n.s 87.0 Weakly correlated
240 L1MA8 2 n.s 87.0 Weakly correlated
241 L1MC2 2 n.s 99.0 Moderately correlated
242 L1MCc 2 n.s 99.0 Moderately correlated
243 L1ME3D 2 n.s 99.0 Moderately correlated
244 L1ME3F 2 n.s 99.0 Moderately correlated
245 L1P2 2 n.s 28.9 Weakly correlated
246 L1PA12 2 n.s 74.0 Weakly correlated
247 L1PA14 2 n.s 74.0 Weakly correlated
248 L1PA15-16 2 n.s 74.0 Weakly correlated
249 L4_B_Mam 2 n.s 99.0 Moderately correlated
250 LTR10C 2 n.s 28.9 Weakly correlated
251 LTR12C 2 n.s 19.6 Weakly correlated
252 LTR15 2 n.s 28.9 Weakly correlated
253 LTR16E2 2 n.s 99.0 Moderately correlated
254 LTR21A 2 ** 28.9 Weakly correlated
255 LTR26 2 n.s 74.0 Weakly correlated
256 LTR26E 2 ** 74.0 Weakly correlated
257 LTR27 2 ** 43.0 Weakly correlated
258 LTR35A 2 ** 43.0 Weakly correlated
259 LTR37-int 2 n.s 99.0 Moderately correlated
260 LTR40b 2 n.s 99.0 Moderately correlated
261 LTR43-int 2 * 74.0 Weakly correlated
262 LTR44 2 * 74.0 Weakly correlated
263 LTR45B 2 n.s 74.0 Weakly correlated
264 LTR52 2 n.s 99.0 Moderately correlated
265 LTR55 2 n.s 99.0 Moderately correlated
266 LTR60B 2 * 74.0 Weakly correlated
267 LTR61 2 * 43.0 Weakly correlated
268 LTR68 2 * 99.0 Moderately correlated
269 LTR78 2 n.s 99.0 Moderately correlated
270 LTR81 2 * 99.0 Moderately correlated
271 LTR85a 2 n.s 99.0 Moderately correlated
272 LTR85b 2 n.s 99.0 Moderately correlated
273 LTR88a 2 n.s 99.0 Moderately correlated
274 MER110 2 n.s 99.0 Moderately correlated
275 MER110A 2 n.s 99.0 Moderately correlated
276 MER21A 2 n.s 74.0 Weakly correlated
277 MER34A1 2 n.s 99.0 Moderately correlated
278 MER41D 2 n.s 74.0 Weakly correlated
279 MER41G 2 ** 74.0 Weakly correlated
280 MER4A1 2 n.s 74.0 Weakly correlated
281 MER4C 2 n.s 74.0 Weakly correlated
282 MER4D 2 n.s 74.0 Weakly correlated
283 MER4D1 2 n.s 74.0 Weakly correlated
284 MER4E 2 n.s 74.0 Weakly correlated
285 MER51-int 2 n.s 43.0 Weakly correlated
286 MER51C 2 * 43.0 Weakly correlated
287 MER52-int 2 n.s 99.0 Moderately correlated
288 MER57A1 2 n.s 43.0 Weakly correlated
289 MER57F 2 n.s 74.0 Weakly correlated
290 MER61D 2 * 43.0 Weakly correlated
291 MER67C 2 n.s 99.0 Moderately correlated
292 MER90 2 n.s 99.0 Moderately correlated
293 MLT1G 2 n.s 99.0 Moderately correlated
294 MLT1H1 2 n.s 99.0 Moderately correlated
295 MLT2A2 2 n.s 74.0 Weakly correlated
296 MLT2C2 2 n.s 99.0 Moderately correlated
297 MLT2F 2 n.s 99.0 Moderately correlated
298 MSTA 2 n.s 43.0 Weakly correlated
299 MSTB2 2 n.s 74.0 Weakly correlated
300 MamGypsy2-LTR 2 * 99.0 Moderately correlated
301 Mam_R4 2 * 99.0 Moderately correlated
302 SVA_D 2 n.s 15.2 Weakly correlated
303 THE1B 2 n.s 43.0 Weakly correlated
304 THE1C 2 n.s 43.0 Weakly correlated
305 AluYk4 1 n.s 15.2 Weakly correlated
306 CR1-3_Croc 1 n.s 319.0 Weakly correlated
307 CR1-L3A_Croc 1 * 319.0 Weakly correlated
308 HERV30-int 1 n.s 28.9 Weakly correlated
309 HERV4_I-int 1 n.s 43.0 Weakly correlated
310 HERVE-int 1 n.s 19.6 Weakly correlated
311 HERVI-int 1 n.s 28.9 Weakly correlated
312 HERVK-int 1 n.s 28.9 Weakly correlated
313 HERVK13-int 1 n.s 19.6 Weakly correlated
314 HERVK22-int 1 n.s 43.0 Weakly correlated
315 HERVL-int 1 n.s 74.0 Weakly correlated
316 HERVP71A-int 1 n.s 43.0 Weakly correlated
317 L1M2a 1 n.s 87.0 Weakly correlated
318 L1M4a1 1 n.s 99.0 Moderately correlated
319 L1M4c 1 n.s 99.0 Moderately correlated
320 L1M7 1 n.s 99.0 Moderately correlated
321 L1MA3 1 n.s 74.0 Weakly correlated
322 L1MB4 1 n.s 99.0 Moderately correlated
323 L1MC4a 1 n.s 99.0 Moderately correlated
324 L1MCa 1 n.s 99.0 Moderately correlated
325 L1ME3E 1 n.s 99.0 Moderately correlated
326 L1MEg2 1 n.s 99.0 Moderately correlated
327 L1P 1 ** 19.6 Weakly correlated
328 L1PA11 1 n.s 74.0 Weakly correlated
329 L1PA6 1 n.s 28.9 Weakly correlated
330 L2-1_AMi 1 n.s 319.0 Weakly correlated
331 L5 1 n.s 99.0 Moderately correlated
332 LOR1-int 1 n.s 74.0 Weakly correlated
333 LTR06 1 * 74.0 Weakly correlated
334 LTR12 1 n.s 28.9 Weakly correlated
335 LTR12E 1 n.s 19.6 Weakly correlated
336 LTR12F 1 n.s 28.9 Weakly correlated
337 LTR14B 1 n.s 28.9 Weakly correlated
338 LTR16A2 1 n.s 99.0 Moderately correlated
339 LTR16B 1 n.s 99.0 Moderately correlated
340 LTR16B1 1 n.s 99.0 Moderately correlated
341 LTR16B2 1 n.s 99.0 Moderately correlated
342 LTR16D 1 n.s 99.0 Moderately correlated
343 LTR16D1 1 n.s 99.0 Moderately correlated
344 LTR18C 1 * 43.0 Weakly correlated
345 LTR19A 1 n.s 43.0 Weakly correlated
346 LTR1D 1 n.s 43.0 Weakly correlated
347 LTR2 1 n.s 28.9 Weakly correlated
348 LTR23 1 n.s 74.0 Weakly correlated
349 LTR24 1 n.s 74.0 Weakly correlated
350 LTR24B 1 n.s 74.0 Weakly correlated
351 LTR25 1 n.s 43.0 Weakly correlated
352 LTR27E 1 n.s 43.0 Weakly correlated
353 LTR3 1 * 28.9 Weakly correlated
354 LTR33C 1 n.s 99.0 Moderately correlated
355 LTR37B 1 n.s 99.0 Moderately correlated
356 LTR40a 1 n.s 99.0 Moderately correlated
357 LTR57 1 n.s 74.0 Weakly correlated
358 LTR59 1 * 43.0 Weakly correlated
359 LTR5_Hs 1 n.s 0.0 Weakly correlated
360 LTR67B 1 n.s 99.0 Moderately correlated
361 LTR75 1 n.s 99.0 Moderately correlated
362 LTR7B 1 n.s 28.9 Weakly correlated
363 LTR81A 1 n.s 99.0 Moderately correlated
364 LTR8A 1 n.s 43.0 Weakly correlated
365 LTR9B 1 n.s 43.0 Weakly correlated
366 MER21B 1 n.s 99.0 Moderately correlated
367 MER34B 1 n.s 87.0 Weakly correlated
368 MER41-int 1 n.s 74.0 Weakly correlated
369 MER4B-int 1 n.s 99.0 Moderately correlated
370 MER51A 1 n.s 43.0 Weakly correlated
371 MER51B 1 n.s 43.0 Weakly correlated
372 MER51E 1 n.s 43.0 Weakly correlated
373 MER52A 1 n.s 74.0 Weakly correlated
374 MER57C2 1 n.s 87.0 Weakly correlated
375 MER57E1 1 n.s 87.0 Weakly correlated
376 MER61F 1 n.s 43.0 Weakly correlated
377 MER67B 1 n.s 99.0 Moderately correlated
378 MER68 1 n.s 99.0 Moderately correlated
379 MER70A 1 n.s 87.0 Weakly correlated
380 MER77 1 n.s 99.0 Moderately correlated
381 MER90a 1 n.s 99.0 Moderately correlated
382 MLT1A-int 1 n.s 99.0 Moderately correlated
383 MLT1G-int 1 n.s 99.0 Moderately correlated
384 MLT1J1 1 n.s 99.0 Moderately correlated
385 MLT1J1-int 1 n.s 99.0 Moderately correlated
386 MLT2B2 1 n.s 99.0 Moderately correlated
387 MSTB 1 n.s 43.0 Weakly correlated
388 MSTB1 1 n.s 74.0 Weakly correlated
389 MSTC 1 n.s 74.0 Weakly correlated
390 MamGyp-int 1 n.s 99.0 Moderately correlated
391 MamGypLTR1a 1 n.s 99.0 Moderately correlated
392 MamGypLTR2b 1 n.s 99.0 Moderately correlated
393 MamGypLTR2c 1 n.s 99.0 Moderately correlated
394 MamGypLTR3a 1 n.s 99.0 Moderately correlated
395 MamGypsy2-I 1 n.s 99.0 Moderately correlated
396 Penelope1_Vert 1 n.s 319.0 Weakly correlated
397 SVA_C 1 n.s 15.2 Weakly correlated
398 SVA_F 1 n.s 0.0 Weakly correlated
399 X2_LINE 1 * 319.0 Weakly correlated
400 X6B_LINE 1 n.s 99.0 Moderately correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluSx 271 ** 74.0 Weakly correlated
2 AluSx1 266 n.s 74.0 Weakly correlated
3 AluSz 176 n.s 74.0 Weakly correlated
4 AluY 162 n.s 74.0 Weakly correlated
5 AluSq2 145 n.s 74.0 Weakly correlated
6 AluJb 132 n.s 74.0 Weakly correlated
7 AluSp 107 n.s 74.0 Weakly correlated
8 AluSg 92 n.s 74.0 Weakly correlated
9 AluSx3 81 ** 74.0 Weakly correlated
10 AluJo 79 n.s 74.0 Weakly correlated
11 AluJr 61 n.s 74.0 Weakly correlated
12 AluSz6 60 n.s 74.0 Weakly correlated
13 AluSc 59 n.s 74.0 Weakly correlated
14 L2a 47 n.s 99.0 Moderately correlated
15 AluSq 41 n.s 74.0 Weakly correlated
16 AluSc8 39 n.s 74.0 Weakly correlated
17 L2c 30 n.s 99.0 Moderately correlated
18 AluSx4 26 n.s 74.0 Weakly correlated
19 L2b 24 n.s 99.0 Moderately correlated
20 MIRb 24 n.s 99.0 Moderately correlated
21 AluSg7 21 n.s 74.0 Weakly correlated
22 MIR 20 n.s 99.0 Moderately correlated
23 FLAM_C 19 n.s 74.0 Weakly correlated
24 MER89 16 **** 99.0 Moderately correlated
25 AluYc 15 ** 74.0 Weakly correlated
26 L2 14 n.s 99.0 Moderately correlated
27 AluSc5 14 n.s 74.0 Weakly correlated
28 MER4-int 13 n.s 74.0 Weakly correlated
29 L1MC4 12 n.s 99.0 Moderately correlated
30 L1MEc 11 n.s 99.0 Moderately correlated
31 MIRc 11 n.s 99.0 Moderately correlated
32 PRIMA4-int 11 **** 74.0 Weakly correlated
33 AluSg4 11 n.s 74.0 Weakly correlated
34 L1M5 11 n.s 99.0 Moderately correlated
35 L1M4 9 n.s 99.0 Moderately correlated
36 AluSq10 8 ** 74.0 Weakly correlated
37 AluYj4 7 n.s 0.0 Weakly correlated
38 AluYm1 7 n.s 19.6 Weakly correlated
39 FRAM 7 n.s 74.0 Weakly correlated
40 AluJr4 7 n.s 74.0 Weakly correlated
41 L1PA2 6 n.s 15.2 Weakly correlated
42 L1PB1 6 n.s 74.0 Weakly correlated
43 AluYa5 6 n.s 15.2 Weakly correlated
44 L1MA4 6 n.s 87.0 Weakly correlated
45 L1ME3G 5 n.s 99.0 Moderately correlated
46 HAL1 5 n.s 99.0 Moderately correlated
47 MIR3 5 n.s 99.0 Moderately correlated
48 AluSq4 5 n.s 74.0 Weakly correlated
49 L1MEd 5 n.s 99.0 Moderately correlated
50 L1PA5 5 n.s 19.6 Weakly correlated
51 MLT1H 5 n.s 99.0 Moderately correlated
52 AluYf1 4 n.s 19.6 Weakly correlated
53 L1ME3Cz 4 n.s 99.0 Moderately correlated
54 L1MD2 4 n.s 99.0 Moderately correlated
55 L1PA15 4 n.s 74.0 Weakly correlated
56 FLAM_A 4 n.s 74.0 Weakly correlated
57 L1PREC2 4 n.s 43.0 Weakly correlated
58 L1MC5a 4 n.s 99.0 Moderately correlated
59 L1PB 4 n.s 74.0 Weakly correlated
60 L1P4 4 n.s 74.0 Weakly correlated
61 L1MB7 4 n.s 99.0 Moderately correlated
62 L1MB8 4 n.s 99.0 Moderately correlated
63 L1MD 4 n.s 99.0 Moderately correlated
64 L1MDa 4 n.s 99.0 Moderately correlated
65 L1ME1 3 n.s 99.0 Moderately correlated
66 L1ME4b 3 n.s 99.0 Moderately correlated
67 L1PA4 3 n.s 19.6 Weakly correlated
68 MLT1K 3 n.s 99.0 Moderately correlated
69 L1MD3 3 n.s 99.0 Moderately correlated
70 L1PA17 3 n.s 74.0 Weakly correlated
71 L1ME3A 3 n.s 99.0 Moderately correlated
72 L1ME4c 3 n.s 99.0 Moderately correlated
73 Alu 3 n.s 74.0 Weakly correlated
74 ERV3-16A3_I-int 3 n.s 99.0 Moderately correlated
75 L1M1 3 n.s 74.0 Weakly correlated
76 L1MB3 3 n.s 99.0 Moderately correlated
77 AluYb8 3 n.s 15.2 Weakly correlated
78 L1PA13 3 n.s 74.0 Weakly correlated
79 L1PA3 3 n.s 19.6 Weakly correlated
80 L1MEg 3 n.s 99.0 Moderately correlated
81 L1P1 3 n.s 19.6 Weakly correlated
82 MLT1B 3 n.s 99.0 Moderately correlated
83 MLT2D 3 n.s 99.0 Moderately correlated
84 L1MC5 2 n.s 99.0 Moderately correlated
85 LTR71B 2 * 43.0 Weakly correlated
86 MER4D1 2 n.s 74.0 Weakly correlated
87 MLT1A0 2 n.s 99.0 Moderately correlated
88 HAL1M8 2 n.s 99.0 Moderately correlated
89 LTR41C 2 n.s 99.0 Moderately correlated
90 MLT2B4 2 n.s 99.0 Moderately correlated
91 PrimLTR79 2 ** 74.0 Weakly correlated
92 AluYh3a3 2 * 15.2 Weakly correlated
93 L1MB2 2 n.s 99.0 Moderately correlated
94 ERVL-E-int 2 n.s 99.0 Moderately correlated
95 HERVH-int 2 n.s 28.9 Weakly correlated
96 L1ME4a 2 n.s 99.0 Moderately correlated
97 L1PA8 2 n.s 74.0 Weakly correlated
98 L3 2 n.s 99.0 Moderately correlated
99 L3b 2 n.s 99.0 Moderately correlated
100 MER4D 2 n.s 74.0 Weakly correlated
101 MLT2C1 2 n.s 99.0 Moderately correlated
102 AluYh3 2 n.s 15.2 Weakly correlated
103 FAM 2 n.s 87.0 Weakly correlated
104 HAL1ME 2 n.s 99.0 Moderately correlated
105 L1MB5 2 n.s 99.0 Moderately correlated
106 L1ME2 2 n.s 99.0 Moderately correlated
107 MLT1I 2 n.s 99.0 Moderately correlated
108 L1MD1 2 n.s 99.0 Moderately correlated
109 L1ME3 2 n.s 99.0 Moderately correlated
110 L1MEf 2 n.s 99.0 Moderately correlated
111 L1PA16 2 n.s 74.0 Weakly correlated
112 MLT1D 2 n.s 99.0 Moderately correlated
113 HERVIP10FH-int 2 n.s 28.9 Weakly correlated
114 LTR40c 2 n.s 99.0 Moderately correlated
115 MER34A1 2 n.s 99.0 Moderately correlated
116 AluYk2 1 n.s 19.6 Weakly correlated
117 HUERS-P3-int 1 n.s 43.0 Weakly correlated
118 L1M3f 1 n.s 87.0 Weakly correlated
119 L1PA12 1 n.s 74.0 Weakly correlated
120 LTR40b 1 n.s 99.0 Moderately correlated
121 MLT1A 1 n.s 99.0 Moderately correlated
122 MLT1J1-int 1 n.s 99.0 Moderately correlated
123 L1MEi 1 n.s 99.0 Moderately correlated
124 LTR50 1 n.s 99.0 Moderately correlated
125 MER4B-int 1 n.s 99.0 Moderately correlated
126 MLT2A2 1 n.s 74.0 Weakly correlated
127 MSTB 1 n.s 43.0 Weakly correlated
128 HAL1b 1 n.s 99.0 Moderately correlated
129 L1M4a1 1 n.s 99.0 Moderately correlated
130 L1ME3B 1 n.s 99.0 Moderately correlated
131 L1ME3F 1 n.s 99.0 Moderately correlated
132 LTR12C 1 n.s 19.6 Weakly correlated
133 MER4A 1 n.s 74.0 Weakly correlated
134 MLT1J2 1 n.s 99.0 Moderately correlated
135 MLT1M 1 n.s 99.0 Moderately correlated
136 MLT1O 1 n.s 99.0 Moderately correlated
137 MSTB1 1 n.s 74.0 Weakly correlated
138 MamGypLTR3 1 n.s 99.0 Moderately correlated
139 MamGypLTR3a 1 n.s 99.0 Moderately correlated
140 AluYe5 1 n.s 74.0 Weakly correlated
141 HERVIP10F-int 1 n.s 28.9 Weakly correlated
142 L1M 1 n.s 74.0 Weakly correlated
143 L1M2a 1 n.s 87.0 Weakly correlated
144 L1M3 1 n.s 99.0 Moderately correlated
145 L1M3e 1 n.s 99.0 Moderately correlated
146 L1MB1 1 n.s 99.0 Moderately correlated
147 L1PA15-16 1 n.s 74.0 Weakly correlated
148 LTR33A 1 n.s 99.0 Moderately correlated
149 LTR81 1 n.s 99.0 Moderately correlated
150 MER61B 1 n.s 43.0 Weakly correlated
151 MER68 1 n.s 99.0 Moderately correlated
152 MIR1_Amn 1 n.s 319.0 Weakly correlated
153 MLT1C 1 n.s 94.0 Highly correlated
154 MLT1F2 1 n.s 99.0 Moderately correlated
155 MLT2C2 1 n.s 99.0 Moderately correlated
156 MSTA 1 n.s 43.0 Weakly correlated
157 AluYi6 1 n.s 15.2 Weakly correlated
158 AluYk3 1 n.s 19.6 Weakly correlated
159 L1MA9 1 n.s 99.0 Moderately correlated
160 L1MC1 1 n.s 99.0 Moderately correlated
161 L1MC3 1 n.s 99.0 Moderately correlated
162 L1P4a 1 n.s 74.0 Weakly correlated
163 LTR26D 1 n.s 0.0 Weakly correlated
164 LTR37-int 1 n.s 99.0 Moderately correlated
165 LTR44 1 n.s 74.0 Weakly correlated
166 MER67C 1 n.s 99.0 Moderately correlated
167 MLT1A-int 1 n.s 99.0 Moderately correlated
168 MLT1N2 1 n.s 99.0 Moderately correlated
169 MSTD 1 n.s 74.0 Weakly correlated
170 MamRTE1 1 n.s 99.0 Moderately correlated
171 HERVK-int 1 n.s 28.9 Weakly correlated
172 L1M2 1 n.s 99.0 Moderately correlated
173 L1M4b 1 n.s 99.0 Moderately correlated
174 L1MA8 1 n.s 87.0 Weakly correlated
175 LTR16B2 1 n.s 99.0 Moderately correlated
176 LTR22B 1 n.s 28.9 Weakly correlated
177 LTR41 1 n.s 99.0 Moderately correlated
178 LTR72 1 n.s 74.0 Weakly correlated
179 LTR8 1 n.s 43.0 Weakly correlated
180 MER50-int 1 n.s 43.0 Weakly correlated
181 MER57E1 1 n.s 87.0 Weakly correlated
182 MER77 1 n.s 99.0 Moderately correlated
183 MamGypsy2-LTR 1 n.s 99.0 Moderately correlated
184 AluYc3 1 n.s 74.0 Weakly correlated
185 AluYk12 1 * 15.2 Weakly correlated
186 AluYk4 1 n.s 15.2 Weakly correlated
187 AmnSINE1 1 n.s 319.0 Weakly correlated
188 L1ME3D 1 n.s 99.0 Moderately correlated
189 L1PA11 1 n.s 74.0 Weakly correlated
190 L1PB3 1 n.s 74.0 Weakly correlated
191 L1PB4 1 n.s 99.0 Moderately correlated
192 LTR19A 1 n.s 43.0 Weakly correlated
193 LTR24B 1 n.s 74.0 Weakly correlated
194 LTR41B 1 n.s 99.0 Moderately correlated
195 LTR43-int 1 n.s 74.0 Weakly correlated
196 MER49 1 n.s 43.0 Weakly correlated
197 MER50 1 n.s 43.0 Weakly correlated
198 MER51C 1 n.s 43.0 Weakly correlated
199 MER52-int 1 n.s 99.0 Moderately correlated
200 MLT1F1 1 n.s 99.0 Moderately correlated
201 MLT1G3 1 n.s 99.0 Moderately correlated
202 MLT1H1 1 n.s 99.0 Moderately correlated
203 MamSINE1 1 n.s 99.0 Moderately correlated
204 THE1B 1 n.s 43.0 Weakly correlated
205 HERV15-int 1 n.s 28.9 Weakly correlated
206 HERVP71A-int 1 n.s 43.0 Weakly correlated
207 L1MC2 1 n.s 99.0 Moderately correlated
208 LTR57 1 n.s 74.0 Weakly correlated
209 MER39 1 n.s 74.0 Weakly correlated
210 MER41-int 1 n.s 74.0 Weakly correlated
211 MER61F 1 n.s 43.0 Weakly correlated
212 MER74A 1 n.s 99.0 Moderately correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUJB 74.0 Weakly correlated
2 ALUJO 74.0 Weakly correlated
3 ALUJR 74.0 Weakly correlated
4 ALUJR4 74.0 Weakly correlated
5 ALUSC 74.0 Weakly correlated
6 ALUSC5 74.0 Weakly correlated
7 ALUSC8 74.0 Weakly correlated
8 ALUSG 74.0 Weakly correlated
9 ALUSG7 74.0 Weakly correlated
10 ALUSP 74.0 Weakly correlated
11 ALUSQ 74.0 Weakly correlated
12 ALUSQ10 74.0 Weakly correlated
13 ALUSQ2 74.0 Weakly correlated
14 ALUSX 74.0 Weakly correlated
15 ALUSX1 74.0 Weakly correlated
16 ALUSX3 74.0 Weakly correlated
17 ALUSX4 74.0 Weakly correlated
18 ALUSZ 74.0 Weakly correlated
19 ALUSZ6 74.0 Weakly correlated
20 ALUY 74.0 Weakly correlated
21 ALUYA5 15.2 Weakly correlated
22 ALUYC 74.0 Weakly correlated
23 ALUYJ4 0.0 Weakly correlated
24 ALUYM1 19.6 Weakly correlated
25 FLAM_C 74.0 Weakly correlated
26 FRAM 74.0 Weakly correlated
27 L1M4 99.0 Moderately correlated
28 L1M5 99.0 Moderately correlated
29 L1MA4 87.0 Weakly correlated
30 L1MEC 99.0 Moderately correlated
31 L1PB1 74.0 Weakly correlated