ZRdb KZFP & Repeats
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SINE_ALUYM1

  • Name
    ALUYM1
  • Repbase
    No find
  • Type
    SINE
  • Emergence
    19.6 Mya
  • Dfam Id
    DF0001154
Description :

Consensus sequence The consensus sequences obtained from Dfam are derived from the seed alignment using a specialized caller. :
ggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
Repeats structure For certain families, there exists a curated collection of TE-derived proteins, which constitutes a non-redundant set. As a results, several families may lack an associated coding sequences directly linked to them. The annotation for these families is obtained from Dfam. :
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequence on the genome. :
# KZFP name Record number KZFP age(Mya) Time correlation with Repeats
1 ZNF441 291 43.0 Weakly correlated
2 ZNF18 157 160.0 Weakly correlated
3 ZNF284 139 43.0 Weakly correlated
4 ZNF394 116 99.0 Weakly correlated
5 ZNF382 108 99.0 Weakly correlated
6 ZNF2 60 99.0 Weakly correlated
7 ZFP37 46 99.0 Weakly correlated
8 ZNF324 42 99.0 Weakly correlated
9 ZNF202 40 160.0 Weakly correlated
10 ZFP69B 38 99.0 Weakly correlated
11 ZNF101 36 43.0 Weakly correlated
12 ZNF680 36 28.9 Weakly correlated
13 ZNF558 33 99.0 Weakly correlated
14 ZNF182 31 99.0 Weakly correlated
15 ZNF257 25 0.0 Weakly correlated
16 ZNF251 24 94.0 Weakly correlated
17 ZNF705B 24 28.9 Weakly correlated
18 ZNF519 23 19.6 Highly correlated
19 ZNF317 20 99.0 Weakly correlated
20 ZNF766 19 43.0 Weakly correlated
21 ZNF140 18 99.0 Weakly correlated
22 ZNF610 18 28.9 Weakly correlated
23 ZIM3 17 87.0 Weakly correlated
24 ZNF479 17 6.4 Moderately correlated
25 ZNF460 16 74.0 Weakly correlated
26 ZFP57 15 87.0 Weakly correlated
27 ZNF534 15 19.6 Highly correlated
28 ZNF705D 13 28.9 Weakly correlated
29 ZNF778 12 74.0 Weakly correlated
30 ZNF695 11 28.9 Weakly correlated
31 ZNF547 10 74.0 Weakly correlated
32 ZNF589 10 28.9 Weakly correlated
33 ZNF679 10 28.9 Weakly correlated
34 ZNF792 10 94.0 Weakly correlated
35 ZNF28 9 28.9 Weakly correlated
36 ZNF486 9 8.6 Moderately correlated
37 ZNF583 9 99.0 Weakly correlated
38 ZNF585B 9 99.0 Weakly correlated
39 ZNF707 9 74.0 Weakly correlated
40 ZKSCAN1 8 160.0 Weakly correlated
41 ZNF175 8 94.0 Weakly correlated
42 ZNF263 8 180.0 Weakly correlated
43 ZNF264 8 99.0 Weakly correlated
44 ZNF793 8 99.0 Weakly correlated
45 ZNF445 7 99.0 Weakly correlated
46 ZNF700 7 28.9 Weakly correlated
47 ZNF763 7 15.2 Moderately correlated
48 ZNF92 7 28.9 Weakly correlated
49 ZNF287 6 99.0 Weakly correlated
50 ZNF334 6 99.0 Weakly correlated
51 ZNF461 6 99.0 Weakly correlated
52 ZNF514 6 94.0 Weakly correlated
53 ZNF528 6 43.0 Weakly correlated
54 ZNF569 6 99.0 Weakly correlated
55 ZNF597 6 94.0 Weakly correlated
56 ZNF607 6 43.0 Weakly correlated
57 ZNF641 6 99.0 Weakly correlated
58 ZNF8 6 99.0 Weakly correlated
59 ZNF136 5 74.0 Weakly correlated
60 ZNF160 5 74.0 Weakly correlated
61 ZNF197 5 99.0 Weakly correlated
62 ZNF347 5 43.0 Weakly correlated
63 ZNF506 5 28.9 Weakly correlated
64 ZNF554 5 99.0 Weakly correlated
65 ZNF584 5 99.0 Weakly correlated
66 ZNF682 5 28.9 Weakly correlated
67 ZNF717 5 0.0 Weakly correlated
68 ZNF728 5 19.6 Highly correlated
69 ZNF786 5 99.0 Weakly correlated
70 ZNF850 5 28.9 Weakly correlated
71 ZFP69 4 99.0 Weakly correlated
72 ZNF141 4 43.0 Weakly correlated
73 ZNF256 4 74.0 Weakly correlated
74 ZNF273 4 28.9 Weakly correlated
75 ZNF320 4 28.9 Weakly correlated
76 ZNF416 4 43.0 Weakly correlated
77 ZNF429 4 28.9 Weakly correlated
78 ZNF473 4 43.0 Weakly correlated
79 ZNF485 4 94.0 Weakly correlated
80 ZNF544 4 0.0 Weakly correlated
81 ZNF560 4 43.0 Weakly correlated
82 ZNF578 4 15.2 Moderately correlated
83 ZNF616 4 43.0 Weakly correlated
84 ZNF675 4 8.6 Moderately correlated
85 ZNF726 4 28.9 Weakly correlated
86 ZNF727 4 19.6 Highly correlated
87 ZNF729 4 8.6 Moderately correlated
88 ZNF735 4 28.9 Weakly correlated
89 ZNF761 4 19.6 Highly correlated
90 ZNF772 4 94.0 Weakly correlated
91 ZNF77 4 87.0 Weakly correlated
92 ZNF845 4 28.9 Weakly correlated
93 ZNF84 4 99.0 Weakly correlated
94 ZFP30 3 99.0 Weakly correlated
95 ZKSCAN4 3 99.0 Weakly correlated
96 ZNF253 3 19.6 Highly correlated
97 ZNF419 3 28.9 Weakly correlated
98 ZNF425 3 94.0 Weakly correlated
99 ZNF555 3 94.0 Weakly correlated
100 ZNF688 3 160.0 Weakly correlated
101 ZNF689 3 99.0 Weakly correlated
102 ZNF701 3 28.9 Weakly correlated
103 ZNF723 3 15.2 Moderately correlated
104 ZNF746 3 99.0 Weakly correlated
105 ZNF81 3 99.0 Weakly correlated
106 ZKSCAN2 2 180.0 Weakly correlated
107 ZKSCAN5 2 160.0 Weakly correlated
108 ZKSCAN8 2 160.0 Weakly correlated
109 ZNF100 2 28.9 Weakly correlated
110 ZNF124 2 43.0 Weakly correlated
111 ZNF133 2 99.0 Weakly correlated
112 ZNF135 2 94.0 Weakly correlated
113 ZNF157 2 99.0 Weakly correlated
114 ZNF169 2 94.0 Weakly correlated
115 ZNF189 2 99.0 Weakly correlated
116 ZNF221 2 74.0 Weakly correlated
117 ZNF222 2 43.0 Weakly correlated
118 ZNF229 2 99.0 Weakly correlated
119 ZNF282 2 319.0 Weakly correlated
120 ZNF302 2 43.0 Weakly correlated
121 ZNF30 2 94.0 Weakly correlated
122 ZNF343 2 74.0 Weakly correlated
123 ZNF350 2 99.0 Weakly correlated
124 ZNF354A 2 99.0 Weakly correlated
125 ZNF354C 2 99.0 Weakly correlated
126 ZNF383 2 99.0 Weakly correlated
127 ZNF439 2 8.6 Moderately correlated
128 ZNF45 2 99.0 Weakly correlated
129 ZNF468 2 28.9 Weakly correlated
130 ZNF490 2 43.0 Weakly correlated
131 ZNF510 2 99.0 Weakly correlated
132 ZNF530 2 28.9 Weakly correlated
133 ZNF543 2 99.0 Weakly correlated
134 ZNF549 2 87.0 Weakly correlated
135 ZNF557 2 15.2 Moderately correlated
136 ZNF567 2 99.0 Weakly correlated
137 ZNF568 2 99.0 Weakly correlated
138 ZNF585A 2 99.0 Weakly correlated
139 ZNF586 2 43.0 Weakly correlated
140 ZNF605 2 99.0 Weakly correlated
141 ZNF611 2 19.6 Highly correlated
142 ZNF627 2 74.0 Weakly correlated
143 ZNF649 2 28.9 Weakly correlated
144 ZNF671 2 94.0 Weakly correlated
145 ZNF674 2 99.0 Weakly correlated
146 ZNF684 2 99.0 Weakly correlated
147 ZNF705E 2 0.0 Weakly correlated
148 ZNF75D 2 94.0 Weakly correlated
149 ZNF776 2 43.0 Weakly correlated
150 ZNF780A 2 43.0 Weakly correlated
151 ZNF791 2 87.0 Weakly correlated
152 ZNF799 2 43.0 Weakly correlated
153 ZNF813 2 28.9 Weakly correlated
154 ZNF814 2 0.0 Weakly correlated
155 ZNF879 2 99.0 Weakly correlated
156 ZNF93 2 8.6 Moderately correlated
157 ZFP14 1 99.0 Weakly correlated
158 ZFP28 1 99.0 Weakly correlated
159 ZFP90 1 99.0 Weakly correlated
160 ZIM2 1 0.0 Weakly correlated
161 ZKSCAN3 1 99.0 Weakly correlated
162 ZNF10 1 99.0 Weakly correlated
163 ZNF114 1 28.9 Weakly correlated
164 ZNF177 1 94.0 Weakly correlated
165 ZNF180 1 99.0 Weakly correlated
166 ZNF181 1 94.0 Weakly correlated
167 ZNF195 1 28.9 Weakly correlated
168 ZNF205 1 180.0 Weakly correlated
169 ZNF20 1 43.0 Weakly correlated
170 ZNF211 1 94.0 Weakly correlated
171 ZNF213 1 180.0 Weakly correlated
172 ZNF214 1 99.0 Weakly correlated
173 ZNF215 1 99.0 Weakly correlated
174 ZNF223 1 43.0 Weakly correlated
175 ZNF225 1 74.0 Weakly correlated
176 ZNF234 1 99.0 Weakly correlated
177 ZNF235 1 99.0 Weakly correlated
178 ZNF248 1 99.0 Weakly correlated
179 ZNF254 1 43.0 Weakly correlated
180 ZNF274 1 99.0 Weakly correlated
181 ZNF304 1 99.0 Weakly correlated
182 ZNF311 1 99.0 Weakly correlated
183 ZNF331 1 94.0 Weakly correlated
184 ZNF333 1 99.0 Weakly correlated
185 ZNF337 1 43.0 Weakly correlated
186 ZNF33A 1 99.0 Weakly correlated
187 ZNF33B 1 99.0 Weakly correlated
188 ZNF417 1 28.9 Weakly correlated
189 ZNF418 1 43.0 Weakly correlated
190 ZNF420 1 94.0 Weakly correlated
191 ZNF426 1 87.0 Weakly correlated
192 ZNF430 1 19.6 Highly correlated
193 ZNF431 1 28.9 Weakly correlated
194 ZNF432 1 99.0 Weakly correlated
195 ZNF433 1 43.0 Weakly correlated
196 ZNF440 1 28.9 Weakly correlated
197 ZNF442 1 43.0 Weakly correlated
198 ZNF443 1 19.6 Highly correlated
199 ZNF446 1 94.0 Weakly correlated
200 ZNF454 1 99.0 Weakly correlated
201 ZNF471 1 94.0 Weakly correlated
202 ZNF480 1 43.0 Weakly correlated
203 ZNF484 1 99.0 Weakly correlated
204 ZNF496 1 99.0 Weakly correlated
205 ZNF525 1 19.6 Highly correlated
206 ZNF529 1 99.0 Weakly correlated
207 ZNF540 1 87.0 Weakly correlated
208 ZNF546 1 99.0 Weakly correlated
209 ZNF548 1 94.0 Weakly correlated
210 ZNF550 1 94.0 Weakly correlated
211 ZNF551 1 94.0 Weakly correlated
212 ZNF552 1 28.9 Weakly correlated
213 ZNF559 1 74.0 Weakly correlated
214 ZNF563 1 28.9 Weakly correlated
215 ZNF565 1 99.0 Weakly correlated
216 ZNF566 1 99.0 Weakly correlated
217 ZNF570 1 99.0 Weakly correlated
218 ZNF573 1 94.0 Weakly correlated
219 ZNF582 1 99.0 Weakly correlated
220 ZNF587 1 28.9 Weakly correlated
221 ZNF614 1 99.0 Weakly correlated
222 ZNF615 1 99.0 Weakly correlated
223 ZNF66 1 0.0 Weakly correlated
224 ZNF677 1 99.0 Weakly correlated
225 ZNF69 1 28.9 Weakly correlated
226 ZNF730 1 19.6 Highly correlated
227 ZNF74 1 99.0 Weakly correlated
228 ZNF75A 1 94.0 Weakly correlated
229 ZNF765 1 8.6 Moderately correlated
230 ZNF782 1 99.0 Weakly correlated
231 ZNF7 1 99.0 Weakly correlated
232 ZNF805 1 99.0 Weakly correlated
233 ZNF808 1 19.6 Highly correlated
234 ZNF816 1 28.9 Weakly correlated
235 ZNF878 1 43.0 Weakly correlated
236 ZNF880 1 28.9 Weakly correlated
237 ZNF90 1 8.6 Moderately correlated
238 ZNF91 1 6.0 Moderately correlated
KZFPs Motif in Repeats The motif of KZFPs found by the meme-chip appears in the repeats sequence. :
# KZFP name Record number KZFP age(Mya) Time correlation with Repeats
1 ZNF441 281 43.0 Weakly correlated
2 ZNF284 127 43.0 Weakly correlated
3 ZNF18 80 160.0 Weakly correlated
4 ZNF202 33 160.0 Weakly correlated
5 ZNF101 28 43.0 Weakly correlated
6 ZNF182 28 99.0 Weakly correlated
7 ZNF519 20 19.6 Highly correlated
8 ZNF257 19 0.0 Weakly correlated
9 ZNF394 19 99.0 Weakly correlated
10 ZNF140 15 99.0 Weakly correlated
11 ZNF460 15 74.0 Weakly correlated
12 ZNF610 9 28.9 Weakly correlated
13 ZNF695 8 28.9 Weakly correlated
14 ZNF792 7 94.0 Weakly correlated
15 ZNF264 6 99.0 Weakly correlated
16 ZNF786 4 99.0 Weakly correlated
17 ZNF334 4 99.0 Weakly correlated
18 ZNF641 4 99.0 Weakly correlated
19 ZNF287 4 99.0 Weakly correlated
20 ZNF445 4 99.0 Weakly correlated
21 ZNF700 3 28.9 Weakly correlated
22 ZNF429 3 28.9 Weakly correlated
23 ZNF382 2 99.0 Weakly correlated
24 ZNF135 2 94.0 Weakly correlated
25 ZIM3 2 87.0 Weakly correlated
26 ZNF28 2 28.9 Weakly correlated
27 ZNF273 2 28.9 Weakly correlated
28 ZNF616 2 43.0 Weakly correlated
29 ZNF534 2 19.6 Highly correlated
30 ZFP57 2 87.0 Weakly correlated
31 ZNF461 2 99.0 Weakly correlated
32 ZNF680 2 28.9 Weakly correlated
33 ZNF560 2 43.0 Weakly correlated
34 ZNF585A 1 99.0 Weakly correlated
35 ZNF440 1 28.9 Weakly correlated
36 ZNF430 1 19.6 Highly correlated
37 ZNF222 1 43.0 Weakly correlated
38 ZNF177 1 94.0 Weakly correlated
39 ZNF682 1 28.9 Weakly correlated
40 ZNF383 1 99.0 Weakly correlated
41 ZNF324 1 99.0 Weakly correlated
42 ZNF425 1 94.0 Weakly correlated
43 ZFP69 1 99.0 Weakly correlated
44 ZNF160 1 74.0 Weakly correlated
45 ZNF2 1 99.0 Weakly correlated
KZFPs Motif in Repeats Consensus The motif of KZFPs found by the meme-chip can find the corresponding region on the consensus sequence of repeats. :
# KZFP name KZFP age(Mya) Time correlation with Repeats
1 ZNF182 99.0 Weakly correlated
2 ZNF695 28.9 Weakly correlated
3 ZNF792 94.0 Weakly correlated