ZRdb KZFP & Repeats
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Human_ZNF202

  • Protein
    Zinc finger protein 202
  • Length
    648
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    160.0 Mya
  • Time of Changing in binding specificity
    160.0 Mya
  • Uniprot_ID
    O95125
  • NCBI_ID
    7753
Sequence:
MATAVEPEDQDLWEEEGILMVKLEDDFTCRPESVLQRDDPVLETSHQNFRRFRYQEAASPREALIRLRELCHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTLVEGLQKQPRRPRRWVTVHVHGQEVLSEETVHLGVEPESPNELQDPVQSSTPEQSPEETTQSPDLGAPAEQRPHQEEELQTLQESEVPVPEDPDLPAERSSGDSEMVALLTALSQGLVTFKDVAVCFSQDQWSDLDPTQKEFYGEYVLEEDCGIVVSLSFPIPRPDEISQVREEEPWVPDIQEPQETQEPEILSFTYTGDRSKDEEECLEQEDLSLEDIHRPVLGEPEIHQTPDWEIVFEDNPGRLNERRFGTNISQVNSFVNLRETTPVHPLLGRHHDCSVCGKSFTCNSHLVRHLRTHTGEKPYKCMECGKSYTRSSHLARHQKVHKMNAPYKYPLNRKNLEETSPVTQAERTPSVEKPYRCDDCGKHFRWTSDLVRHQRTHTGEKPFFCTICGKSFSQKSVLTTHQRIHLGGKPYLCGECGEDFSEHRRYLAHRKTHAAEELYLCSECGRCFTHSAAFAKHLRGHASVRPCRCNECGKSFSRRDHLVRHQRTHTGEKPFTCPTCGKSFSRGYHLIRHQRTHSEKTS
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 scan 46..127
2 KRAB 237..308
3 C2h2 397..419
4 C2h2 425..447
5 C2h2 481..503
6 C2h2 509..531
7 C2h2 537..559
8 C2h2 565..587
9 C2h2 593..615
10 C2h2 621..643
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component chromosome
2 Cellular Component nuclear body
3 Cellular Component nucleolus
4 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
5 Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific
6 Molecular Function metal ion binding
7 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
8 Biological Process lipid metabolic process
9 Biological Process negative regulation of transcription by RNA polymerase II
10 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluY 903 **** 74.0 Weakly correlated
2 AluSx 227 n.s 74.0 Weakly correlated
3 AluSx1 188 n.s 74.0 Weakly correlated
4 AluJb 176 n.s 74.0 Weakly correlated
5 AluSz 160 n.s 74.0 Weakly correlated
6 LTR12C 146 **** 19.6 Weakly correlated
7 AluSq2 122 n.s 74.0 Weakly correlated
8 SVA_D 111 **** 15.2 Weakly correlated
9 L2a 106 n.s 99.0 Weakly correlated
10 AluSc 101 ** 74.0 Weakly correlated
11 AluSp 99 n.s 74.0 Weakly correlated
12 MIRb 96 n.s 99.0 Weakly correlated
13 AluSg 93 n.s 74.0 Weakly correlated
14 AluJo 79 n.s 74.0 Weakly correlated
15 AluYa5 79 **** 15.2 Weakly correlated
16 AluJr 76 n.s 74.0 Weakly correlated
17 HERVIP10FH-int 73 **** 28.9 Weakly correlated
18 AluSz6 69 n.s 74.0 Weakly correlated
19 AluSc8 67 ** 74.0 Weakly correlated
20 MIR 67 n.s 99.0 Weakly correlated
21 L2b 66 n.s 99.0 Weakly correlated
22 L2c 64 n.s 99.0 Weakly correlated
23 MIR3 60 n.s 99.0 Weakly correlated
24 SVA_B 59 **** 15.2 Weakly correlated
25 AluSx3 54 n.s 74.0 Weakly correlated
26 AluYc 45 **** 74.0 Weakly correlated
27 MIRc 45 n.s 99.0 Weakly correlated
28 L1MC4 44 n.s 99.0 Weakly correlated
29 L2 41 n.s 99.0 Weakly correlated
30 AluYm1 40 **** 19.6 Weakly correlated
31 L1PA5 38 n.s 19.6 Weakly correlated
32 SVA_C 36 **** 15.2 Weakly correlated
33 L1M5 33 n.s 99.0 Weakly correlated
34 L1MEd 30 n.s 99.0 Weakly correlated
35 AluYe5 27 **** 74.0 Weakly correlated
36 SVA_F 27 **** 0.0 Weakly correlated
37 AluYj4 26 **** 0.0 Weakly correlated
38 LTR8 26 **** 43.0 Weakly correlated
39 L1M4b 25 n.s 99.0 Weakly correlated
40 L1MEc 25 n.s 99.0 Weakly correlated
41 AluSq 23 n.s 74.0 Weakly correlated
42 L1ME1 23 n.s 99.0 Weakly correlated
43 HERV17-int 22 **** 28.9 Weakly correlated
44 L1PA7 22 n.s 74.0 Weakly correlated
45 AluSx4 21 n.s 74.0 Weakly correlated
46 HAL1 19 n.s 99.0 Weakly correlated
47 LTR13 19 **** 19.6 Weakly correlated
48 L1MB7 18 n.s 99.0 Weakly correlated
49 MSTA 18 n.s 43.0 Weakly correlated
50 AluYh3 17 **** 15.2 Weakly correlated
51 FLAM_C 17 n.s 74.0 Weakly correlated
52 L1PA2 17 n.s 15.2 Weakly correlated
53 L1PA3 17 n.s 19.6 Weakly correlated
54 MER4-int 17 n.s 74.0 Weakly correlated
55 MIR1_Amn 17 ** 319.0 Weakly correlated
56 L1MDa 16 n.s 99.0 Weakly correlated
57 L1MEg 15 n.s 99.0 Weakly correlated
58 L3 15 n.s 99.0 Weakly correlated
59 PRIMA4-int 15 **** 74.0 Weakly correlated
60 AluYk4 14 **** 15.2 Weakly correlated
61 FRAM 14 * 74.0 Weakly correlated
62 L1MA9 14 n.s 99.0 Weakly correlated
63 AluJr4 13 n.s 74.0 Weakly correlated
64 AluYf1 13 *** 19.6 Weakly correlated
65 L1M4 13 n.s 99.0 Weakly correlated
66 L1MEf 13 n.s 99.0 Weakly correlated
67 LTR12E 13 **** 19.6 Weakly correlated
68 AluSg4 12 n.s 74.0 Weakly correlated
69 L1ME2z 12 n.s 99.0 Weakly correlated
70 L1ME4a 12 n.s 99.0 Weakly correlated
71 L1PA16 12 n.s 74.0 Weakly correlated
72 L1PA4 12 n.s 19.6 Weakly correlated
73 L1PA6 12 n.s 28.9 Weakly correlated
74 LTR10A 12 **** 28.9 Weakly correlated
75 AluSc5 11 n.s 74.0 Weakly correlated
76 AluSg7 11 n.s 74.0 Weakly correlated
77 AluYb8 11 * 15.2 Weakly correlated
78 AluYi6 11 **** 15.2 Weakly correlated
79 HERVH-int 11 n.s 28.9 Weakly correlated
80 L1MA3 11 n.s 74.0 Weakly correlated
81 L1MA4 11 n.s 87.0 Weakly correlated
82 MLT1B 11 n.s 99.0 Weakly correlated
83 SVA_A 11 *** 19.6 Weakly correlated
84 AluYk2 10 **** 19.6 Weakly correlated
85 L1MB5 10 n.s 99.0 Weakly correlated
86 L1ME3G 10 n.s 99.0 Weakly correlated
87 MER52D 10 ** 74.0 Weakly correlated
88 MSTD 10 n.s 74.0 Weakly correlated
89 FLAM_A 9 n.s 74.0 Weakly correlated
90 L1M1 9 n.s 74.0 Weakly correlated
91 L1MA8 9 n.s 87.0 Weakly correlated
92 L1MC1 9 n.s 99.0 Weakly correlated
93 L1MD2 9 n.s 99.0 Weakly correlated
94 L1MDb 9 ** 99.0 Weakly correlated
95 L1PB1 9 n.s 74.0 Weakly correlated
96 SVA_E 9 *** 0.0 Weakly correlated
97 AluYk3 8 ** 19.6 Weakly correlated
98 HAL1b 8 n.s 99.0 Weakly correlated
99 L1MB3 8 n.s 99.0 Weakly correlated
100 L1MB8 8 n.s 99.0 Weakly correlated
101 L1MD1 8 n.s 99.0 Weakly correlated
102 L1ME2 8 n.s 99.0 Weakly correlated
103 AluYg6 7 **** 15.2 Weakly correlated
104 L1M2 7 n.s 99.0 Weakly correlated
105 L1MC5a 7 n.s 99.0 Weakly correlated
106 L1ME4b 7 n.s 99.0 Weakly correlated
107 Alu 6 ** 74.0 Weakly correlated
108 AluSq10 6 n.s 74.0 Weakly correlated
109 AluYc3 6 *** 74.0 Weakly correlated
110 ERVL-B4-int 6 n.s 99.0 Weakly correlated
111 HERVK-int 6 n.s 28.9 Weakly correlated
112 L1MA6 6 n.s 87.0 Weakly correlated
113 L1MC 6 n.s 99.0 Weakly correlated
114 L1ME3 6 n.s 99.0 Weakly correlated
115 L1P1 6 n.s 19.6 Weakly correlated
116 L1PA10 6 n.s 74.0 Weakly correlated
117 LTR41B 6 ** 99.0 Weakly correlated
118 THE1C 6 n.s 43.0 Weakly correlated
119 AluSq4 5 n.s 74.0 Weakly correlated
120 AluYe6 5 **** 74.0 Weakly correlated
121 L1M4c 5 n.s 99.0 Weakly correlated
122 L1MC5 5 n.s 99.0 Weakly correlated
123 L1ME3A 5 n.s 99.0 Weakly correlated
124 L1P4 5 n.s 74.0 Weakly correlated
125 L1PA13 5 n.s 74.0 Weakly correlated
126 L1PB 5 n.s 74.0 Weakly correlated
127 L1PB4 5 n.s 99.0 Weakly correlated
128 L1PREC2 5 n.s 43.0 Weakly correlated
129 LTR10F 5 ** 28.9 Weakly correlated
130 MLT1D 5 n.s 99.0 Weakly correlated
131 MLT1G1 5 n.s 99.0 Weakly correlated
132 MLT1H1 5 n.s 99.0 Weakly correlated
133 MamRTE1 5 n.s 99.0 Weakly correlated
134 HAL1ME 4 n.s 99.0 Weakly correlated
135 HERV15-int 4 * 28.9 Weakly correlated
136 HERVH48-int 4 * 28.9 Weakly correlated
137 Harlequin-int 4 n.s 74.0 Weakly correlated
138 L1M3 4 n.s 99.0 Weakly correlated
139 L1MB2 4 n.s 99.0 Weakly correlated
140 L1MB4 4 n.s 99.0 Weakly correlated
141 L1MD 4 n.s 99.0 Weakly correlated
142 L1ME3Cz 4 n.s 99.0 Weakly correlated
143 L1PA11 4 n.s 74.0 Weakly correlated
144 L1PA15 4 n.s 74.0 Weakly correlated
145 L1PA8A 4 n.s 74.0 Weakly correlated
146 L1PB3 4 n.s 74.0 Weakly correlated
147 LTR9D 4 n.s 43.0 Weakly correlated
148 MER41A 4 n.s 74.0 Weakly correlated
149 MER50 4 n.s 43.0 Weakly correlated
150 MLT1A 4 n.s 99.0 Weakly correlated
151 MLT1E2 4 n.s 99.0 Weakly correlated
152 MLT1L 4 n.s 99.0 Weakly correlated
153 MLT1O 4 n.s 99.0 Weakly correlated
154 MLT2B3 4 n.s 99.0 Weakly correlated
155 HERVL18-int 3 n.s 43.0 Weakly correlated
156 HUERS-P3-int 3 n.s 43.0 Weakly correlated
157 L1M7 3 n.s 99.0 Weakly correlated
158 L1MA1 3 n.s 74.0 Weakly correlated
159 L1MA2 3 n.s 74.0 Weakly correlated
160 L1MA5 3 n.s 87.0 Weakly correlated
161 L1MC4a 3 n.s 99.0 Weakly correlated
162 L1MCa 3 n.s 99.0 Weakly correlated
163 L1MCb 3 n.s 99.0 Weakly correlated
164 L1ME5 3 n.s 99.0 Weakly correlated
165 L1PA14 3 n.s 74.0 Weakly correlated
166 LTR12D 3 n.s 19.6 Weakly correlated
167 LTR14B 3 * 28.9 Weakly correlated
168 LTR1A1 3 n.s 43.0 Weakly correlated
169 LTR55 3 * 99.0 Weakly correlated
170 LTR82A 3 n.s 99.0 Weakly correlated
171 LTR9 3 n.s 43.0 Weakly correlated
172 MER39B 3 n.s 74.0 Weakly correlated
173 MER9a3 3 n.s 28.9 Weakly correlated
174 MLT1E1A 3 n.s 99.0 Weakly correlated
175 MLT1F 3 n.s 99.0 Weakly correlated
176 MLT1F2 3 n.s 99.0 Weakly correlated
177 MLT2B4 3 n.s 99.0 Weakly correlated
178 THE1A 3 n.s 43.0 Weakly correlated
179 THE1B 3 n.s 43.0 Weakly correlated
180 AluYd8 2 ** 15.2 Weakly correlated
181 AluYh3a3 2 * 15.2 Weakly correlated
182 AluYh9 2 *** 15.2 Weakly correlated
183 HUERS-P2-int 2 n.s 43.0 Weakly correlated
184 L1HS 2 n.s 8.6 Weakly correlated
185 L1MA4A 2 n.s 87.0 Weakly correlated
186 L1MA5A 2 n.s 87.0 Weakly correlated
187 L1MC2 2 n.s 99.0 Weakly correlated
188 L1MC3 2 n.s 99.0 Weakly correlated
189 L1MCc 2 n.s 99.0 Weakly correlated
190 L1ME3C 2 n.s 99.0 Weakly correlated
191 L1ME3E 2 n.s 99.0 Weakly correlated
192 L1ME3F 2 n.s 99.0 Weakly correlated
193 L1PA12 2 n.s 74.0 Weakly correlated
194 L1PA8 2 n.s 74.0 Weakly correlated
195 L4_A_Mam 2 n.s 99.0 Weakly correlated
196 LOR1a 2 n.s 74.0 Weakly correlated
197 LTR10B1 2 * 28.9 Weakly correlated
198 LTR16A 2 n.s 99.0 Weakly correlated
199 LTR16D 2 n.s 99.0 Weakly correlated
200 LTR18B 2 n.s 43.0 Weakly correlated
201 LTR1A2 2 n.s 43.0 Weakly correlated
202 LTR33A 2 n.s 99.0 Weakly correlated
203 LTR35A 2 ** 43.0 Weakly correlated
204 LTR40a 2 n.s 99.0 Weakly correlated
205 LTR49-int 2 n.s 74.0 Weakly correlated
206 LTR53-int 2 n.s 99.0 Weakly correlated
207 LTR54 2 n.s 74.0 Weakly correlated
208 LTR5_Hs 2 n.s 0.0 Weakly correlated
209 LTR9A1 2 n.s 43.0 Weakly correlated
210 MER11B 2 n.s 19.6 Weakly correlated
211 MER41B 2 n.s 74.0 Weakly correlated
212 MER41D 2 n.s 74.0 Weakly correlated
213 MER50-int 2 n.s 43.0 Weakly correlated
214 MER51-int 2 n.s 43.0 Weakly correlated
215 MER57B1 2 n.s 43.0 Weakly correlated
216 MER57E3 2 ** 74.0 Weakly correlated
217 MER67C 2 n.s 99.0 Weakly correlated
218 MER77B 2 n.s 99.0 Weakly correlated
219 MLT1C 2 n.s 94.0 Weakly correlated
220 MLT1F1 2 n.s 99.0 Weakly correlated
221 MLT1J2 2 n.s 99.0 Weakly correlated
222 MSTA-int 2 n.s 43.0 Weakly correlated
223 MSTB 2 n.s 43.0 Weakly correlated
224 MSTC 2 n.s 74.0 Weakly correlated
225 THE1A-int 2 n.s 43.0 Weakly correlated
226 THE1C-int 2 n.s 43.0 Weakly correlated
227 AluYa8 1 * 15.2 Weakly correlated
228 AluYh7 1 * 0.0 Weakly correlated
229 AmnSINE1 1 n.s 319.0 Weakly correlated
230 AmnSINE2 1 n.s 319.0 Weakly correlated
231 CR1-3_Croc 1 n.s 319.0 Weakly correlated
232 ERV3-16A3_I-int 1 n.s 99.0 Weakly correlated
233 FAM 1 n.s 87.0 Weakly correlated
234 HAL1M8 1 n.s 99.0 Weakly correlated
235 HERV3-int 1 n.s 28.9 Weakly correlated
236 HERV4_I-int 1 n.s 43.0 Weakly correlated
237 HERV9-int 1 n.s 28.9 Weakly correlated
238 HERVK9-int 1 n.s 28.9 Weakly correlated
239 HERVS71-int 1 n.s 28.9 Weakly correlated
240 L1M 1 n.s 74.0 Weakly correlated
241 L1M4a1 1 n.s 99.0 Weakly correlated
242 L1M4a2 1 n.s 99.0 Weakly correlated
243 L1MA7 1 n.s 87.0 Weakly correlated
244 L1MD3 1 n.s 99.0 Weakly correlated
245 L1ME3B 1 n.s 99.0 Weakly correlated
246 L1ME4c 1 n.s 99.0 Weakly correlated
247 L1MEi 1 n.s 99.0 Weakly correlated
248 L1MEj 1 n.s 99.0 Weakly correlated
249 L1P3 1 n.s 74.0 Weakly correlated
250 L1P4a 1 n.s 74.0 Weakly correlated
251 L1PA15-16 1 n.s 74.0 Weakly correlated
252 L3b 1 n.s 99.0 Weakly correlated
253 L4_C_Mam 1 n.s 99.0 Weakly correlated
254 L5 1 n.s 99.0 Weakly correlated
255 LOR1-int 1 n.s 74.0 Weakly correlated
256 LOR1b 1 n.s 74.0 Weakly correlated
257 LTR102_Mam 1 n.s 99.0 Weakly correlated
258 LTR16A1 1 n.s 99.0 Weakly correlated
259 LTR16C 1 n.s 99.0 Weakly correlated
260 LTR16E1 1 n.s 99.0 Weakly correlated
261 LTR17 1 n.s 28.9 Weakly correlated
262 LTR18A 1 n.s 43.0 Weakly correlated
263 LTR19A 1 n.s 43.0 Weakly correlated
264 LTR22 1 n.s 28.9 Weakly correlated
265 LTR25-int 1 n.s 43.0 Weakly correlated
266 LTR26C 1 n.s 0.0 Weakly correlated
267 LTR26E 1 * 74.0 Weakly correlated
268 LTR33A_ 1 n.s 99.0 Weakly correlated
269 LTR33B 1 n.s 99.0 Weakly correlated
270 LTR35B 1 n.s 43.0 Weakly correlated
271 LTR37-int 1 n.s 99.0 Weakly correlated
272 LTR3B_ 1 n.s 28.9 Weakly correlated
273 LTR40c 1 n.s 99.0 Weakly correlated
274 LTR41 1 n.s 99.0 Weakly correlated
275 LTR41C 1 n.s 99.0 Weakly correlated
276 LTR48 1 n.s 74.0 Weakly correlated
277 LTR60B 1 n.s 74.0 Weakly correlated
278 LTR7 1 n.s 19.6 Weakly correlated
279 LTR75B 1 n.s 99.0 Weakly correlated
280 LTR7B 1 n.s 28.9 Weakly correlated
281 LTR88a 1 n.s 99.0 Weakly correlated
282 LTR88b 1 n.s 99.0 Weakly correlated
283 MER11C 1 n.s 19.6 Weakly correlated
284 MER31A 1 n.s 87.0 Weakly correlated
285 MER34A 1 n.s 99.0 Weakly correlated
286 MER34A1 1 n.s 99.0 Weakly correlated
287 MER34D 1 n.s 74.0 Weakly correlated
288 MER39 1 n.s 74.0 Weakly correlated
289 MER41G 1 n.s 74.0 Weakly correlated
290 MER49 1 n.s 43.0 Weakly correlated
291 MER4A1_ 1 n.s 74.0 Weakly correlated
292 MER4C 1 n.s 74.0 Weakly correlated
293 MER4D 1 n.s 74.0 Weakly correlated
294 MER4E1 1 n.s 74.0 Weakly correlated
295 MER51B 1 n.s 43.0 Weakly correlated
296 MER52-int 1 n.s 99.0 Weakly correlated
297 MER52C 1 n.s 74.0 Weakly correlated
298 MER57-int 1 n.s 87.0 Weakly correlated
299 MER57A-int 1 n.s 43.0 Weakly correlated
300 MER57B2 1 n.s 43.0 Weakly correlated
301 MER61-int 1 n.s 43.0 Weakly correlated
302 MER61C 1 n.s 43.0 Weakly correlated
303 MER65-int 1 n.s 87.0 Weakly correlated
304 MER65C 1 n.s 74.0 Weakly correlated
305 MER66B 1 n.s 43.0 Weakly correlated
306 MER67D 1 n.s 99.0 Weakly correlated
307 MER74A 1 n.s 99.0 Weakly correlated
308 MER76 1 n.s 99.0 Weakly correlated
309 MER77 1 n.s 99.0 Weakly correlated
310 MER83B 1 * 43.0 Weakly correlated
311 MER84-int 1 n.s 74.0 Weakly correlated
312 MER90 1 n.s 99.0 Weakly correlated
313 MER90a 1 n.s 99.0 Weakly correlated
314 MLT1A0 1 n.s 99.0 Weakly correlated
315 MLT1A1 1 n.s 87.0 Weakly correlated
316 MLT1E 1 n.s 99.0 Weakly correlated
317 MLT1G 1 n.s 99.0 Weakly correlated
318 MLT1H 1 n.s 99.0 Weakly correlated
319 MLT1H2 1 n.s 99.0 Weakly correlated
320 MLT1J 1 n.s 99.0 Weakly correlated
321 MLT1J1 1 n.s 99.0 Weakly correlated
322 MLT1K 1 n.s 99.0 Weakly correlated
323 MLT2B2 1 n.s 99.0 Weakly correlated
324 MLT2D 1 n.s 99.0 Weakly correlated
325 MSTB2 1 n.s 74.0 Weakly correlated
326 MamGypLTR1c 1 n.s 99.0 Weakly correlated
327 MamGypLTR2b 1 n.s 99.0 Weakly correlated
328 MamGypLTR3 1 n.s 99.0 Weakly correlated
329 MamGypsy2-I 1 n.s 99.0 Weakly correlated
330 MamRep1151 1 n.s 99.0 Weakly correlated
331 MamSINE1 1 n.s 99.0 Weakly correlated
332 PABL_A 1 n.s 43.0 Weakly correlated
333 Penelope1_Vert 1 n.s 319.0 Weakly correlated
334 Plat_L3 1 n.s 99.0 Weakly correlated
335 THE1B-int 1 n.s 43.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluY 665 **** 74.0 Weakly correlated
2 AluSx 153 n.s 74.0 Weakly correlated
3 AluSx1 129 n.s 74.0 Weakly correlated
4 AluSz 101 n.s 74.0 Weakly correlated
5 AluJb 89 n.s 74.0 Weakly correlated
6 AluSc 79 n.s 74.0 Weakly correlated
7 AluSq2 76 n.s 74.0 Weakly correlated
8 AluSp 72 n.s 74.0 Weakly correlated
9 AluYa5 56 **** 15.2 Weakly correlated
10 AluSg 54 n.s 74.0 Weakly correlated
11 AluSc8 47 n.s 74.0 Weakly correlated
12 AluSz6 46 n.s 74.0 Weakly correlated
13 AluSx3 41 n.s 74.0 Weakly correlated
14 SVA_D 37 **** 15.2 Weakly correlated
15 AluJo 34 n.s 74.0 Weakly correlated
16 AluJr 33 n.s 74.0 Weakly correlated
17 AluYm1 33 **** 19.6 Weakly correlated
18 AluYc 31 **** 74.0 Weakly correlated
19 L1PA5 27 n.s 19.6 Weakly correlated
20 L2a 20 n.s 99.0 Weakly correlated
21 SVA_B 20 **** 15.2 Weakly correlated
22 AluYe5 19 **** 74.0 Weakly correlated
23 AluSq 18 n.s 74.0 Weakly correlated
24 L1PA7 17 n.s 74.0 Weakly correlated
25 AluSx4 16 n.s 74.0 Weakly correlated
26 L2c 12 n.s 99.0 Weakly correlated
27 MIRb 12 n.s 99.0 Weakly correlated
28 L1MEc 12 n.s 99.0 Weakly correlated
29 MER4-int 12 n.s 74.0 Weakly correlated
30 L1M5 12 n.s 99.0 Weakly correlated
31 L1ME1 11 n.s 99.0 Weakly correlated
32 L1MB7 11 n.s 99.0 Weakly correlated
33 AluYj4 11 * 0.0 Weakly correlated
34 AluYk4 10 **** 15.2 Weakly correlated
35 L1PA6 10 n.s 28.9 Weakly correlated
36 AluYh3 10 ** 15.2 Weakly correlated
37 AluYi6 10 **** 15.2 Weakly correlated
38 L1PA4 9 n.s 19.6 Weakly correlated
39 SVA_C 9 ** 15.2 Weakly correlated
40 AluYf1 9 * 19.6 Weakly correlated
41 PRIMA4-int 9 **** 74.0 Weakly correlated
42 L1MC4 8 n.s 99.0 Weakly correlated
43 AluYb8 8 n.s 15.2 Weakly correlated
44 AluYk2 8 *** 19.6 Weakly correlated
45 L1MEg 8 n.s 99.0 Weakly correlated
46 L1PB1 8 n.s 74.0 Weakly correlated
47 AluSc5 8 n.s 74.0 Weakly correlated
48 L1PA3 8 n.s 19.6 Weakly correlated
49 AluSg7 8 n.s 74.0 Weakly correlated
50 L2b 8 n.s 99.0 Weakly correlated
51 L2 7 n.s 99.0 Weakly correlated
52 MIR 7 n.s 99.0 Weakly correlated
53 AluJr4 6 n.s 74.0 Weakly correlated
54 AluYg6 6 *** 15.2 Weakly correlated
55 L1M4b 6 n.s 99.0 Weakly correlated
56 L1MA9 6 n.s 99.0 Weakly correlated
57 L1MB5 6 n.s 99.0 Weakly correlated
58 L1ME2z 6 n.s 99.0 Weakly correlated
59 AluYk3 6 * 19.6 Weakly correlated
60 L1MA3 6 n.s 74.0 Weakly correlated
61 FLAM_C 5 n.s 74.0 Weakly correlated
62 HAL1 5 n.s 99.0 Weakly correlated
63 AluYe6 5 **** 74.0 Weakly correlated
64 L1MA8 5 n.s 87.0 Weakly correlated
65 L1M1 5 n.s 74.0 Weakly correlated
66 L1MEf 5 n.s 99.0 Weakly correlated
67 L1MC1 5 n.s 99.0 Weakly correlated
68 L1ME4a 4 n.s 99.0 Weakly correlated
69 SVA_E 4 n.s 0.0 Weakly correlated
70 L1ME3A 4 n.s 99.0 Weakly correlated
71 L3 4 n.s 99.0 Weakly correlated
72 AluSq4 4 n.s 74.0 Weakly correlated
73 AluSg4 4 n.s 74.0 Weakly correlated
74 L1MB3 4 n.s 99.0 Weakly correlated
75 AluSq10 4 n.s 74.0 Weakly correlated
76 AluYc3 4 ** 74.0 Weakly correlated
77 L1MD2 4 n.s 99.0 Weakly correlated
78 MIRc 4 n.s 99.0 Weakly correlated
79 L1M2 4 n.s 99.0 Weakly correlated
80 L1MD1 4 n.s 99.0 Weakly correlated
81 L1PA16 4 n.s 74.0 Weakly correlated
82 L1ME2 3 n.s 99.0 Weakly correlated
83 SVA_A 3 n.s 19.6 Weakly correlated
84 L1MCa 3 n.s 99.0 Weakly correlated
85 L1P4 3 n.s 74.0 Weakly correlated
86 L1PA15 3 n.s 74.0 Weakly correlated
87 L1M4 3 n.s 99.0 Weakly correlated
88 L1PB 3 n.s 74.0 Weakly correlated
89 MLT1B 3 n.s 99.0 Weakly correlated
90 FLAM_A 3 n.s 74.0 Weakly correlated
91 L1ME3G 3 n.s 99.0 Weakly correlated
92 Alu 3 n.s 74.0 Weakly correlated
93 L1MD 3 n.s 99.0 Weakly correlated
94 L1MA4 3 n.s 87.0 Weakly correlated
95 L1ME4b 3 n.s 99.0 Weakly correlated
96 L1MEd 3 n.s 99.0 Weakly correlated
97 L1PA10 3 n.s 74.0 Weakly correlated
98 L1PA2 3 n.s 15.2 Weakly correlated
99 L1MCb 2 n.s 99.0 Weakly correlated
100 L1ME3 2 n.s 99.0 Weakly correlated
101 L1P1 2 n.s 19.6 Weakly correlated
102 HERV15-int 2 n.s 28.9 Weakly correlated
103 THE1A-int 2 n.s 43.0 Weakly correlated
104 AluYd8 2 ** 15.2 Weakly correlated
105 FRAM 2 n.s 74.0 Weakly correlated
106 L1MB8 2 n.s 99.0 Weakly correlated
107 L1M3 2 n.s 99.0 Weakly correlated
108 L1M4c 2 n.s 99.0 Weakly correlated
109 L1MA1 2 n.s 74.0 Weakly correlated
110 L1MA5 2 n.s 87.0 Weakly correlated
111 L1ME3Cz 2 n.s 99.0 Weakly correlated
112 LTR10B1 2 * 28.9 Weakly correlated
113 LTR49-int 2 n.s 74.0 Weakly correlated
114 MLT1L 2 n.s 99.0 Weakly correlated
115 L1MC4a 2 n.s 99.0 Weakly correlated
116 MLT1H1 2 n.s 99.0 Weakly correlated
117 MLT2B4 2 n.s 99.0 Weakly correlated
118 ERVL-B4-int 2 n.s 99.0 Weakly correlated
119 L1ME3C 2 n.s 99.0 Weakly correlated
120 L1MC2 2 n.s 99.0 Weakly correlated
121 LTR1A1 2 n.s 43.0 Weakly correlated
122 LTR8 2 n.s 43.0 Weakly correlated
123 MER41A 2 n.s 74.0 Weakly correlated
124 MSTA 2 n.s 43.0 Weakly correlated
125 AluYh3a3 1 n.s 15.2 Weakly correlated
126 L1ME5 1 n.s 99.0 Weakly correlated
127 L1PA11 1 n.s 74.0 Weakly correlated
128 L1PA8 1 n.s 74.0 Weakly correlated
129 L1PB4 1 n.s 99.0 Weakly correlated
130 LTR33A 1 n.s 99.0 Weakly correlated
131 LTR48 1 n.s 74.0 Weakly correlated
132 LTR60B 1 n.s 74.0 Weakly correlated
133 MER90a 1 n.s 99.0 Weakly correlated
134 MLT1D 1 n.s 99.0 Weakly correlated
135 MLT1E1A 1 n.s 99.0 Weakly correlated
136 MSTB 1 n.s 43.0 Weakly correlated
137 MSTD 1 n.s 74.0 Weakly correlated
138 L1M7 1 n.s 99.0 Weakly correlated
139 L1MA5A 1 n.s 87.0 Weakly correlated
140 L1PB3 1 n.s 74.0 Weakly correlated
141 LTR41B 1 n.s 99.0 Weakly correlated
142 MER65-int 1 n.s 87.0 Weakly correlated
143 MER74A 1 n.s 99.0 Weakly correlated
144 MER77 1 n.s 99.0 Weakly correlated
145 MLT1F1 1 n.s 99.0 Weakly correlated
146 MLT1G1 1 n.s 99.0 Weakly correlated
147 AluYa8 1 * 15.2 Weakly correlated
148 HAL1M8 1 n.s 99.0 Weakly correlated
149 HERV4_I-int 1 n.s 43.0 Weakly correlated
150 L1ME3B 1 n.s 99.0 Weakly correlated
151 L1ME3F 1 n.s 99.0 Weakly correlated
152 L1PA13 1 n.s 74.0 Weakly correlated
153 L1PA14 1 n.s 74.0 Weakly correlated
154 L1PA8A 1 n.s 74.0 Weakly correlated
155 LTR16D 1 n.s 99.0 Weakly correlated
156 MER4D 1 n.s 74.0 Weakly correlated
157 MER52-int 1 n.s 99.0 Weakly correlated
158 L1P3 1 n.s 74.0 Weakly correlated
159 LTR102_Mam 1 n.s 99.0 Weakly correlated
160 LTR40c 1 n.s 99.0 Weakly correlated
161 LTR54 1 n.s 74.0 Weakly correlated
162 LTR82A 1 n.s 99.0 Weakly correlated
163 MLT1A0 1 n.s 99.0 Weakly correlated
164 HAL1b 1 n.s 99.0 Weakly correlated
165 HERV17-int 1 n.s 28.9 Weakly correlated
166 L1MC3 1 n.s 99.0 Weakly correlated
167 L1PREC2 1 n.s 43.0 Weakly correlated
168 LTR12E 1 n.s 19.6 Weakly correlated
169 LTR7 1 n.s 19.6 Weakly correlated
170 LTR9D 1 n.s 43.0 Weakly correlated
171 MER51-int 1 n.s 43.0 Weakly correlated
172 MIR1_Amn 1 n.s 319.0 Weakly correlated
173 MLT1H 1 n.s 99.0 Weakly correlated
174 MamGypLTR1c 1 n.s 99.0 Weakly correlated
175 THE1B 1 n.s 43.0 Weakly correlated
176 L1M 1 n.s 74.0 Weakly correlated
177 L1MA2 1 n.s 74.0 Weakly correlated
178 L1MC 1 n.s 99.0 Weakly correlated
179 L1MDa 1 n.s 99.0 Weakly correlated
180 L1ME3E 1 n.s 99.0 Weakly correlated
181 MER34D 1 n.s 74.0 Weakly correlated
182 MER57B2 1 n.s 43.0 Weakly correlated
183 MLT1F 1 n.s 99.0 Weakly correlated
184 MamRep1151 1 n.s 99.0 Weakly correlated
185 THE1A 1 n.s 43.0 Weakly correlated
186 THE1C 1 n.s 43.0 Weakly correlated
187 L1MCc 1 n.s 99.0 Weakly correlated
188 MER9a3 1 n.s 28.9 Weakly correlated
189 L1ME4c 1 n.s 99.0 Weakly correlated
190 LOR1-int 1 n.s 74.0 Weakly correlated
191 LTR37-int 1 n.s 99.0 Weakly correlated
192 LTR40a 1 n.s 99.0 Weakly correlated
193 MER84-int 1 n.s 74.0 Weakly correlated
194 MLT1E2 1 n.s 99.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 L1MEC 99.0 Weakly correlated
2 MER4-INT 74.0 Weakly correlated
3 PRIMA4-INT 74.0 Weakly correlated
4 SVA_B 15.2 Weakly correlated
5 SVA_C 15.2 Weakly correlated
6 SVA_D 15.2 Weakly correlated