ZRdb KZFP & Repeats
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Human_ZNF701

  • Protein
    Zinc finger protein 701
  • Length
    531
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    28.9 Mya
  • Time of Changing in binding specificity
    28.9 Mya
  • Uniprot_ID
    Q9NV72
  • NCBI_ID
    55762
Sequence:
MGFLHVGQDGLELPTSGDPPASASQSAGITGVSHRTQPPCFEGLTSKDLVREEKTRKRKRKAKESGMALLQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDTSSKCMMKMFSSTGQGNTEVVHTGTLQIHASHHIGDTCFQEIEKDIHDFVFQWQENETNGHEALMTKTKKLMSSTERHDQRHAGNKPIKNELGSSFHSHLPEVHIFHPEGKIGNQVEKAINDAFSVSASQRISCRPKTRISNKYRNNFLQSSLLTQKREVHTREKSFQRNESGKAFNGSSLLKKHQIIHLGDKQYKCDVCGKDFHQKRYLACHRCHTGENPYTCNECGKTFSHNSALLVHKAIHTGEKPYKCNECGKVFNQQSNLARHHRVHTGEKPYKCEECDKVFSRKSHLERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMHKVIHTGEKRYKCNECGKVFNHKSNLACHRRLHTGEKPYKCNECGKVFNRKSNLERHHRLHTGKKS
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 74..146
2 dec2h2 281..303
3 C2h2 309..330
4 C2h2 336..358
5 C2h2 364..386
6 C2h2 392..414
7 C2h2 420..442
8 C2h2 448..470
9 C2h2 476..498
10 C2h2 504..526
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 622 **** 99.0 Weakly correlated
2 L2a 568 **** 99.0 Weakly correlated
3 L2c 430 **** 99.0 Weakly correlated
4 L2b 384 **** 99.0 Weakly correlated
5 MIR 370 **** 99.0 Weakly correlated
6 MIRc 335 **** 99.0 Weakly correlated
7 MIR3 263 **** 99.0 Weakly correlated
8 AluJb 176 n.s 74.0 Weakly correlated
9 L2 145 n.s 99.0 Weakly correlated
10 AluSx1 125 n.s 74.0 Weakly correlated
11 AluSx 120 n.s 74.0 Weakly correlated
12 L3 108 ** 99.0 Weakly correlated
13 AluJr 107 n.s 74.0 Weakly correlated
14 LTR8 99 **** 43.0 Moderately correlated
15 AluSz 96 n.s 74.0 Weakly correlated
16 AluJo 90 n.s 74.0 Weakly correlated
17 L1PA7 90 n.s 74.0 Weakly correlated
18 MamRTE1 64 **** 99.0 Weakly correlated
19 AluSq2 62 n.s 74.0 Weakly correlated
20 MLT1K 59 *** 99.0 Weakly correlated
21 L1PA6 56 n.s 28.9 Highly correlated
22 MIR1_Amn 55 **** 319.0 Weakly correlated
23 L1PA3 54 n.s 19.6 Weakly correlated
24 L1M5 53 n.s 99.0 Weakly correlated
25 HAL1 47 n.s 99.0 Weakly correlated
26 L1ME4b 47 n.s 99.0 Weakly correlated
27 AluY 46 n.s 74.0 Weakly correlated
28 AluSx3 41 n.s 74.0 Weakly correlated
29 AluSp 40 n.s 74.0 Weakly correlated
30 AluSz6 40 n.s 74.0 Weakly correlated
31 LTR33 40 **** 99.0 Weakly correlated
32 MLT1C 39 n.s 94.0 Weakly correlated
33 L1PB1 38 n.s 74.0 Weakly correlated
34 L1MC4 36 n.s 99.0 Weakly correlated
35 AluSg 35 n.s 74.0 Weakly correlated
36 L1PA4 35 n.s 19.6 Weakly correlated
37 MLT1J 35 n.s 99.0 Weakly correlated
38 L1M1 34 n.s 74.0 Weakly correlated
39 L1M4 34 n.s 99.0 Weakly correlated
40 LTR16C 34 **** 99.0 Weakly correlated
41 L1ME1 33 n.s 99.0 Weakly correlated
42 MLT1H 31 n.s 99.0 Weakly correlated
43 L1ME3G 30 n.s 99.0 Weakly correlated
44 AmnSINE1 29 **** 319.0 Weakly correlated
45 L1MB7 29 n.s 99.0 Weakly correlated
46 HERVE-int 28 **** 19.6 Weakly correlated
47 L3b 28 **** 99.0 Weakly correlated
48 MLT1I 28 n.s 99.0 Weakly correlated
49 MLT1N2 27 **** 99.0 Weakly correlated
50 AluSc 26 n.s 74.0 Weakly correlated
51 ERVL-E-int 26 n.s 99.0 Weakly correlated
52 L1MC5a 26 n.s 99.0 Weakly correlated
53 L1ME3 25 n.s 99.0 Weakly correlated
54 L1ME4a 25 n.s 99.0 Weakly correlated
55 L1PA16 25 n.s 74.0 Weakly correlated
56 LTR41 25 **** 99.0 Weakly correlated
57 ERV3-16A3_I-int 24 n.s 99.0 Weakly correlated
58 L1MEd 24 n.s 99.0 Weakly correlated
59 L1P2 24 n.s 28.9 Highly correlated
60 L1ME3A 23 n.s 99.0 Weakly correlated
61 MSTA 23 n.s 43.0 Moderately correlated
62 L1MEg 22 n.s 99.0 Weakly correlated
63 LTR50 22 **** 99.0 Weakly correlated
64 MER41B 22 *** 74.0 Weakly correlated
65 MLT1D 22 n.s 99.0 Weakly correlated
66 MLT1J2 22 ** 99.0 Weakly correlated
67 AluJr4 21 n.s 74.0 Weakly correlated
68 AluSq 21 n.s 74.0 Weakly correlated
69 MLT1H2 21 *** 99.0 Weakly correlated
70 MLT1J1 21 *** 99.0 Weakly correlated
71 MLT1L 21 n.s 99.0 Weakly correlated
72 AluSc8 20 n.s 74.0 Weakly correlated
73 FLAM_C 20 n.s 74.0 Weakly correlated
74 L1MB3 20 n.s 99.0 Weakly correlated
75 L1MC3 20 n.s 99.0 Weakly correlated
76 MER11D 20 **** 19.6 Weakly correlated
77 MER21A 20 **** 74.0 Weakly correlated
78 HERV17-int 19 *** 28.9 Highly correlated
79 L4_A_Mam 19 n.s 99.0 Weakly correlated
80 LTR3A 19 **** 28.9 Highly correlated
81 MER31B 19 **** 99.0 Weakly correlated
82 HERVH-int 18 n.s 28.9 Highly correlated
83 L1MD2 18 n.s 99.0 Weakly correlated
84 MER4D 18 **** 74.0 Weakly correlated
85 MLT1B 18 n.s 99.0 Weakly correlated
86 MamSINE1 18 **** 99.0 Weakly correlated
87 L1MC5 17 n.s 99.0 Weakly correlated
88 MER4D1 17 *** 74.0 Weakly correlated
89 MER50 17 * 43.0 Moderately correlated
90 HERV3-int 16 **** 28.9 Highly correlated
91 L1MB8 16 n.s 99.0 Weakly correlated
92 L1MCa 16 n.s 99.0 Weakly correlated
93 L1MEc 16 n.s 99.0 Weakly correlated
94 L1PA15-16 16 n.s 74.0 Weakly correlated
95 L1PBa 16 n.s 74.0 Weakly correlated
96 LTR41C 16 **** 99.0 Weakly correlated
97 MER21C 16 n.s 99.0 Weakly correlated
98 MER31A 16 **** 87.0 Weakly correlated
99 FRAM 15 * 74.0 Weakly correlated
100 L1MA3 15 n.s 74.0 Weakly correlated
101 L1MC4a 15 n.s 99.0 Weakly correlated
102 LTR40a 15 *** 99.0 Weakly correlated
103 LTR41B 15 **** 99.0 Weakly correlated
104 MLT2B4 15 n.s 99.0 Weakly correlated
105 MSTB1 15 n.s 74.0 Weakly correlated
106 ERVL-B4-int 14 n.s 99.0 Weakly correlated
107 L1ME2 14 n.s 99.0 Weakly correlated
108 L1MEf 14 n.s 99.0 Weakly correlated
109 LTR16A 14 n.s 99.0 Weakly correlated
110 LTR78 14 n.s 99.0 Weakly correlated
111 LTR8B 14 ** 43.0 Moderately correlated
112 MER39 14 n.s 74.0 Weakly correlated
113 MER41A 14 * 74.0 Weakly correlated
114 MER49 14 *** 43.0 Moderately correlated
115 MLT1F2 14 n.s 99.0 Weakly correlated
116 MamGypLTR3a 14 **** 99.0 Weakly correlated
117 HAL1ME 13 n.s 99.0 Weakly correlated
118 L1ME2z 13 n.s 99.0 Weakly correlated
119 L1PA17 13 n.s 74.0 Weakly correlated
120 L1PA5 13 n.s 19.6 Weakly correlated
121 LTR16 13 * 99.0 Weakly correlated
122 LTR16A2 13 *** 99.0 Weakly correlated
123 MER11A 13 * 28.9 Highly correlated
124 MER4B 13 ** 74.0 Weakly correlated
125 MER52A 13 n.s 74.0 Weakly correlated
126 MLT1A0 13 n.s 99.0 Weakly correlated
127 HERVK3-int 12 *** 28.9 Highly correlated
128 L1MA9 12 n.s 99.0 Weakly correlated
129 L1MB2 12 n.s 99.0 Weakly correlated
130 L1MB5 12 n.s 99.0 Weakly correlated
131 L4_C_Mam 12 n.s 99.0 Weakly correlated
132 LFSINE_Vert 12 **** 319.0 Weakly correlated
133 LTR16A1 12 * 99.0 Weakly correlated
134 MLT1F 12 n.s 99.0 Weakly correlated
135 Plat_L3 12 *** 99.0 Weakly correlated
136 HERVL40-int 11 ** 99.0 Weakly correlated
137 L1MC1 11 n.s 99.0 Weakly correlated
138 L1ME3Cz 11 n.s 99.0 Weakly correlated
139 L1ME4c 11 n.s 99.0 Weakly correlated
140 L1PA2 11 n.s 15.2 Weakly correlated
141 LTR33A_ 11 ** 99.0 Weakly correlated
142 MER39B 11 ** 74.0 Weakly correlated
143 MLT2C1 11 * 99.0 Weakly correlated
144 MamRep605 11 n.s 99.0 Weakly correlated
145 L1MA4 10 n.s 87.0 Weakly correlated
146 L1MA4A 10 n.s 87.0 Weakly correlated
147 L1PA10 10 n.s 74.0 Weakly correlated
148 L1PB4 10 n.s 99.0 Weakly correlated
149 LTR3 10 **** 28.9 Highly correlated
150 LTR67B 10 n.s 99.0 Weakly correlated
151 MER11B 10 ** 19.6 Weakly correlated
152 MLT1E1A 10 n.s 99.0 Weakly correlated
153 MLT1M 10 *** 99.0 Weakly correlated
154 L1M2 9 n.s 99.0 Weakly correlated
155 L1MA2 9 n.s 74.0 Weakly correlated
156 L1MD3 9 n.s 99.0 Weakly correlated
157 L1ME3B 9 n.s 99.0 Weakly correlated
158 L1MEh 9 n.s 99.0 Weakly correlated
159 L1P3 9 n.s 74.0 Weakly correlated
160 LTR13 9 ** 19.6 Weakly correlated
161 MER110 9 **** 99.0 Weakly correlated
162 MER66C 9 **** 43.0 Moderately correlated
163 MER74A 9 * 99.0 Weakly correlated
164 MER77 9 * 99.0 Weakly correlated
165 MLT2F 9 n.s 99.0 Weakly correlated
166 MamGypLTR3 9 **** 99.0 Weakly correlated
167 AluSg4 8 n.s 74.0 Weakly correlated
168 FLAM_A 8 n.s 74.0 Weakly correlated
169 HERVP71A-int 8 ** 43.0 Moderately correlated
170 L1M4c 8 n.s 99.0 Weakly correlated
171 L1MA7 8 n.s 87.0 Weakly correlated
172 L1MCc 8 n.s 99.0 Weakly correlated
173 L1P1 8 n.s 19.6 Weakly correlated
174 L1PA13 8 n.s 74.0 Weakly correlated
175 L1PA15 8 n.s 74.0 Weakly correlated
176 LTR16E1 8 n.s 99.0 Weakly correlated
177 LTR16E2 8 n.s 99.0 Weakly correlated
178 LTR40b 8 ** 99.0 Weakly correlated
179 LTR53 8 **** 99.0 Weakly correlated
180 LTR85a 8 ** 99.0 Weakly correlated
181 MER4A 8 ** 74.0 Weakly correlated
182 MLT1F1 8 n.s 99.0 Weakly correlated
183 MLT1G3 8 n.s 99.0 Weakly correlated
184 Alu 7 ** 74.0 Weakly correlated
185 AluSx4 7 n.s 74.0 Weakly correlated
186 HAL1b 7 n.s 99.0 Weakly correlated
187 HERVK9-int 7 n.s 28.9 Highly correlated
188 L1M4a2 7 n.s 99.0 Weakly correlated
189 L1M6 7 n.s 99.0 Weakly correlated
190 L1ME3E 7 n.s 99.0 Weakly correlated
191 L1PB3 7 n.s 74.0 Weakly correlated
192 L1PBa1 7 n.s 74.0 Weakly correlated
193 L2-1_AMi 7 *** 319.0 Weakly correlated
194 L4_B_Mam 7 n.s 99.0 Weakly correlated
195 LTR104_Mam 7 * 99.0 Weakly correlated
196 LTR10A 7 **** 28.9 Highly correlated
197 LTR33A 7 n.s 99.0 Weakly correlated
198 LTR55 7 *** 99.0 Weakly correlated
199 LTR79 7 n.s 99.0 Weakly correlated
200 MER4-int 7 n.s 74.0 Weakly correlated
201 MER41C 7 ** 74.0 Weakly correlated
202 MER57-int 7 n.s 87.0 Weakly correlated
203 MER61-int 7 n.s 43.0 Moderately correlated
204 MLT1G 7 n.s 99.0 Weakly correlated
205 MLT1G1 7 n.s 99.0 Weakly correlated
206 MLT1O 7 n.s 99.0 Weakly correlated
207 MLT2D 7 n.s 99.0 Weakly correlated
208 MamGypsy2-I 7 n.s 99.0 Weakly correlated
209 THE1D 7 n.s 43.0 Moderately correlated
210 AluSg7 6 n.s 74.0 Weakly correlated
211 AluYj4 6 n.s 0.0 Weakly correlated
212 AmnSINE2 6 **** 319.0 Weakly correlated
213 CR1-3_Croc 6 ** 319.0 Weakly correlated
214 FAM 6 n.s 87.0 Weakly correlated
215 HERVIP10F-int 6 n.s 28.9 Highly correlated
216 HERVK-int 6 n.s 28.9 Highly correlated
217 HERVL-int 6 n.s 74.0 Weakly correlated
218 L1MA1 6 n.s 74.0 Weakly correlated
219 L1MA8 6 n.s 87.0 Weakly correlated
220 L1MB4 6 n.s 99.0 Weakly correlated
221 L1ME3F 6 n.s 99.0 Weakly correlated
222 L1PA8 6 n.s 74.0 Weakly correlated
223 L1PB2 6 n.s 74.0 Weakly correlated
224 L1PREC2 6 n.s 43.0 Moderately correlated
225 LTR13_ 6 **** 28.9 Highly correlated
226 LTR4 6 **** 28.9 Highly correlated
227 LTR57 6 **** 74.0 Weakly correlated
228 LTR75B 6 **** 99.0 Weakly correlated
229 LTR78B 6 n.s 99.0 Weakly correlated
230 LTR82A 6 * 99.0 Weakly correlated
231 LTR88a 6 *** 99.0 Weakly correlated
232 LTR88b 6 * 99.0 Weakly correlated
233 MER65C 6 ** 74.0 Weakly correlated
234 MER67C 6 n.s 99.0 Weakly correlated
235 MER68 6 n.s 99.0 Weakly correlated
236 MER77B 6 n.s 99.0 Weakly correlated
237 MER90a 6 n.s 99.0 Weakly correlated
238 MLT1J-int 6 n.s 99.0 Weakly correlated
239 MLT2B1 6 n.s 99.0 Weakly correlated
240 MLT2B3 6 n.s 99.0 Weakly correlated
241 PABL_B 6 *** 43.0 Moderately correlated
242 X6A_LINE 6 *** 99.0 Weakly correlated
243 AluSc5 5 n.s 74.0 Weakly correlated
244 HERV15-int 5 ** 28.9 Highly correlated
245 HERVK14-int 5 * 28.9 Highly correlated
246 HUERS-P3b-int 5 n.s 43.0 Moderately correlated
247 L1M3f 5 n.s 87.0 Weakly correlated
248 L1M4b 5 n.s 99.0 Weakly correlated
249 L1MB1 5 n.s 99.0 Weakly correlated
250 L1MC2 5 n.s 99.0 Weakly correlated
251 L1MCb 5 n.s 99.0 Weakly correlated
252 L1MD 5 n.s 99.0 Weakly correlated
253 L1MD1 5 n.s 99.0 Weakly correlated
254 L1MDb 5 n.s 99.0 Weakly correlated
255 L1ME3C 5 n.s 99.0 Weakly correlated
256 L1MEi 5 n.s 99.0 Weakly correlated
257 LOR1-int 5 n.s 74.0 Weakly correlated
258 LTR18B 5 ** 43.0 Moderately correlated
259 LTR24 5 *** 74.0 Weakly correlated
260 LTR3B 5 **** 28.9 Highly correlated
261 LTR49-int 5 n.s 74.0 Weakly correlated
262 LTR82B 5 n.s 99.0 Weakly correlated
263 LTR84b 5 * 99.0 Weakly correlated
264 LTR9A1 5 * 43.0 Moderately correlated
265 MER101B 5 **** 87.0 Weakly correlated
266 MER110A 5 ** 99.0 Weakly correlated
267 MER21B 5 n.s 99.0 Weakly correlated
268 MER4D0 5 ** 74.0 Weakly correlated
269 MER50-int 5 n.s 43.0 Moderately correlated
270 MER51A 5 n.s 43.0 Moderately correlated
271 MER66-int 5 n.s 43.0 Moderately correlated
272 MER67A 5 *** 99.0 Weakly correlated
273 MER89 5 n.s 99.0 Weakly correlated
274 MLT1H1 5 n.s 99.0 Weakly correlated
275 MSTB 5 n.s 43.0 Moderately correlated
276 MamGypLTR1b 5 * 99.0 Weakly correlated
277 MamGypLTR1c 5 * 99.0 Weakly correlated
278 THE1B 5 n.s 43.0 Moderately correlated
279 AluYc 4 n.s 74.0 Weakly correlated
280 CR1_Mam 4 n.s 99.0 Weakly correlated
281 ERV24_Prim-int 4 n.s 74.0 Weakly correlated
282 HAL1M8 4 n.s 99.0 Weakly correlated
283 HERV1_I-int 4 ** 43.0 Moderately correlated
284 HERVIP10FH-int 4 n.s 28.9 Highly correlated
285 HERVL18-int 4 n.s 43.0 Moderately correlated
286 L1HS 4 n.s 8.6 Weakly correlated
287 L1M3 4 n.s 99.0 Weakly correlated
288 L1M3e 4 n.s 99.0 Weakly correlated
289 L1MA5 4 n.s 87.0 Weakly correlated
290 L1MA5A 4 n.s 87.0 Weakly correlated
291 L1MEb 4 n.s 99.0 Weakly correlated
292 LTR101_Mam 4 n.s 99.0 Weakly correlated
293 LTR16B2 4 n.s 99.0 Weakly correlated
294 LTR16D 4 n.s 99.0 Weakly correlated
295 LTR2 4 n.s 28.9 Highly correlated
296 LTR22E 4 *** 28.9 Highly correlated
297 LTR23 4 * 74.0 Weakly correlated
298 LTR28B 4 * 43.0 Moderately correlated
299 LTR32 4 n.s 43.0 Moderately correlated
300 LTR36 4 * 74.0 Weakly correlated
301 LTR37B 4 n.s 99.0 Weakly correlated
302 LTR43B 4 *** 74.0 Weakly correlated
303 LTR44 4 ** 74.0 Weakly correlated
304 LTR65 4 ** 99.0 Weakly correlated
305 LTR72 4 *** 74.0 Weakly correlated
306 LTR84a 4 * 99.0 Weakly correlated
307 LTR85b 4 n.s 99.0 Weakly correlated
308 LTR88c 4 * 99.0 Weakly correlated
309 LTR8A 4 n.s 43.0 Moderately correlated
310 LTR90A 4 *** 99.0 Weakly correlated
311 LTR9B 4 n.s 43.0 Moderately correlated
312 MER21-int 4 n.s 99.0 Weakly correlated
313 MER34A1 4 n.s 99.0 Weakly correlated
314 MER51B 4 * 43.0 Moderately correlated
315 MER54B 4 * 87.0 Weakly correlated
316 MER57B1 4 n.s 43.0 Moderately correlated
317 MER65A 4 n.s 74.0 Weakly correlated
318 MER68B 4 * 99.0 Weakly correlated
319 MER76 4 n.s 99.0 Weakly correlated
320 MLT1A0-int 4 n.s 99.0 Weakly correlated
321 MLT1E2 4 n.s 99.0 Weakly correlated
322 MLT1H1-int 4 * 99.0 Weakly correlated
323 MLT2A2 4 n.s 74.0 Weakly correlated
324 MSTC 4 n.s 74.0 Weakly correlated
325 MamGypLTR2c 4 * 99.0 Weakly correlated
326 Penelope1_Vert 4 ** 319.0 Weakly correlated
327 THE1B-int 4 n.s 43.0 Moderately correlated
328 THE1D-int 4 n.s 28.9 Highly correlated
329 X6B_LINE 4 ** 99.0 Weakly correlated
330 X7A_LINE 4 ** 319.0 Weakly correlated
331 AluSq10 3 n.s 74.0 Weakly correlated
332 AluYa5 3 n.s 15.2 Weakly correlated
333 AluYm1 3 n.s 19.6 Weakly correlated
334 HERV16-int 3 n.s 99.0 Weakly correlated
335 HERV9N-int 3 n.s 19.6 Weakly correlated
336 HERVE_a-int 3 n.s 28.9 Highly correlated
337 HERVK11-int 3 n.s 28.9 Highly correlated
338 HUERS-P3-int 3 n.s 43.0 Moderately correlated
339 L1M3b 3 n.s 99.0 Weakly correlated
340 L1M8 3 n.s 99.0 Weakly correlated
341 L1MA10 3 n.s 99.0 Weakly correlated
342 L1MA6 3 n.s 87.0 Weakly correlated
343 L1MC 3 n.s 99.0 Weakly correlated
344 L1MDa 3 n.s 99.0 Weakly correlated
345 L1ME5 3 n.s 99.0 Weakly correlated
346 L1MEj 3 n.s 99.0 Weakly correlated
347 L1P4 3 n.s 74.0 Weakly correlated
348 L1PA11 3 n.s 74.0 Weakly correlated
349 L1PA12 3 n.s 74.0 Weakly correlated
350 L1PBb 3 n.s 74.0 Weakly correlated
351 L5 3 * 99.0 Weakly correlated
352 LOR1a 3 n.s 74.0 Weakly correlated
353 LTR108a_Mam 3 *** 99.0 Weakly correlated
354 LTR14B 3 n.s 28.9 Highly correlated
355 LTR19A 3 n.s 43.0 Moderately correlated
356 LTR1A2 3 n.s 43.0 Moderately correlated
357 LTR22A 3 ** 43.0 Moderately correlated
358 LTR25 3 * 43.0 Moderately correlated
359 LTR26 3 n.s 74.0 Weakly correlated
360 LTR33C 3 n.s 99.0 Weakly correlated
361 LTR35A 3 *** 43.0 Moderately correlated
362 LTR37A 3 n.s 99.0 Weakly correlated
363 LTR39 3 n.s 43.0 Moderately correlated
364 LTR40A1 3 * 99.0 Weakly correlated
365 LTR47A 3 n.s 74.0 Weakly correlated
366 LTR49 3 n.s 74.0 Weakly correlated
367 LTR76 3 * 74.0 Weakly correlated
368 LTR81B 3 n.s 99.0 Weakly correlated
369 LTR83 3 n.s 99.0 Weakly correlated
370 LTR89 3 n.s 99.0 Weakly correlated
371 MER101 3 * 74.0 Weakly correlated
372 MER11C 3 n.s 19.6 Weakly correlated
373 MER31-int 3 n.s 99.0 Weakly correlated
374 MER41-int 3 n.s 74.0 Weakly correlated
375 MER52C 3 n.s 74.0 Weakly correlated
376 MER54A 3 n.s 87.0 Weakly correlated
377 MER57B2 3 n.s 43.0 Moderately correlated
378 MER57E1 3 * 87.0 Weakly correlated
379 MER57F 3 * 74.0 Weakly correlated
380 MER61E 3 * 43.0 Moderately correlated
381 MER66B 3 n.s 43.0 Moderately correlated
382 MER67D 3 n.s 99.0 Weakly correlated
383 MER68-int 3 * 99.0 Weakly correlated
384 MER70A 3 n.s 87.0 Weakly correlated
385 MER70B 3 n.s 87.0 Weakly correlated
386 MER84 3 * 43.0 Moderately correlated
387 MER92B 3 n.s 99.0 Weakly correlated
388 MLT1A1 3 n.s 87.0 Weakly correlated
389 MLT1H-int 3 n.s 99.0 Weakly correlated
390 MLT2B2 3 n.s 99.0 Weakly correlated
391 MamGypLTR1a 3 n.s 99.0 Weakly correlated
392 MamGypsy2-LTR 3 * 99.0 Weakly correlated
393 AluYa8 2 ** 15.2 Weakly correlated
394 AluYh9 2 *** 15.2 Weakly correlated
395 ERV24B_Prim-int 2 n.s 74.0 Weakly correlated
396 ERV3-16A3_LTR 2 n.s 99.0 Weakly correlated
397 ERVL-int 2 n.s 99.0 Weakly correlated
398 ERVL47-int 2 n.s 74.0 Weakly correlated
399 HERV1_LTRc 2 *** 28.9 Highly correlated
400 HERV9-int 2 n.s 28.9 Highly correlated
401 HERVFH21-int 2 n.s 28.9 Highly correlated
402 HERVK22-int 2 n.s 43.0 Moderately correlated
403 HUERS-P1-int 2 n.s 43.0 Moderately correlated
404 L1M2c 2 n.s 87.0 Weakly correlated
405 L1M6B 2 n.s 99.0 Weakly correlated
406 L1M7 2 n.s 99.0 Weakly correlated
407 L1MEa 2 n.s 99.0 Weakly correlated
408 L1P4d 2 n.s 74.0 Weakly correlated
409 L1PA14 2 n.s 74.0 Weakly correlated
410 L1PB 2 n.s 74.0 Weakly correlated
411 L2-3_Crp 2 n.s 431.0 Weakly correlated
412 LTR1 2 n.s 43.0 Moderately correlated
413 LTR105_Mam 2 n.s 99.0 Weakly correlated
414 LTR12F 2 n.s 28.9 Highly correlated
415 LTR14C 2 * 28.9 Highly correlated
416 LTR16B 2 n.s 99.0 Weakly correlated
417 LTR16B1 2 n.s 99.0 Weakly correlated
418 LTR16D1 2 * 99.0 Weakly correlated
419 LTR16D2 2 n.s 99.0 Weakly correlated
420 LTR1D 2 n.s 43.0 Moderately correlated
421 LTR1F2 2 * 43.0 Moderately correlated
422 LTR22B 2 * 28.9 Highly correlated
423 LTR26D 2 * 0.0 Weakly correlated
424 LTR27E 2 n.s 43.0 Moderately correlated
425 LTR29 2 n.s 43.0 Moderately correlated
426 LTR33B 2 n.s 99.0 Weakly correlated
427 LTR34 2 n.s 74.0 Weakly correlated
428 LTR38A1 2 ** 74.0 Weakly correlated
429 LTR42 2 n.s 74.0 Weakly correlated
430 LTR47B2 2 * 74.0 Weakly correlated
431 LTR47B4 2 ** 74.0 Weakly correlated
432 LTR52-int 2 * 99.0 Weakly correlated
433 LTR54 2 n.s 74.0 Weakly correlated
434 LTR54B 2 n.s 74.0 Weakly correlated
435 LTR57-int 2 n.s 74.0 Weakly correlated
436 LTR5_Hs 2 n.s 0.0 Weakly correlated
437 LTR64 2 n.s 74.0 Weakly correlated
438 LTR7C 2 n.s 28.9 Highly correlated
439 LTR80A 2 n.s 99.0 Weakly correlated
440 LTR80B 2 n.s 99.0 Weakly correlated
441 LTR81A 2 n.s 99.0 Weakly correlated
442 LTR87 2 n.s 99.0 Weakly correlated
443 LTR9 2 n.s 43.0 Moderately correlated
444 MER110-int 2 n.s 99.0 Weakly correlated
445 MER34-int 2 n.s 99.0 Weakly correlated
446 MER34B-int 2 n.s 99.0 Weakly correlated
447 MER34C2 2 n.s 74.0 Weakly correlated
448 MER41D 2 n.s 74.0 Weakly correlated
449 MER41E 2 n.s 74.0 Weakly correlated
450 MER57C1 2 * 74.0 Weakly correlated
451 MER61B 2 n.s 43.0 Moderately correlated
452 MER65-int 2 n.s 87.0 Weakly correlated
453 MER65D 2 n.s 87.0 Weakly correlated
454 MER66A 2 n.s 43.0 Moderately correlated
455 MER67B 2 n.s 99.0 Weakly correlated
456 MER83B-int 2 n.s 99.0 Weakly correlated
457 MER87 2 * 43.0 Moderately correlated
458 MER87B 2 * 74.0 Weakly correlated
459 MER88 2 ** 99.0 Weakly correlated
460 MER90 2 n.s 99.0 Weakly correlated
461 MLT1A 2 n.s 99.0 Weakly correlated
462 MLT1A1-int 2 n.s 87.0 Weakly correlated
463 MLT1E 2 n.s 99.0 Weakly correlated
464 MLT1E3 2 n.s 99.0 Weakly correlated
465 MLT1H2-int 2 n.s 99.0 Weakly correlated
466 MSTD 2 n.s 74.0 Weakly correlated
467 MSTD-int 2 n.s 74.0 Weakly correlated
468 MamGypLTR2b 2 n.s 99.0 Weakly correlated
469 PABL_A 2 n.s 43.0 Moderately correlated
470 SVA_E 2 n.s 0.0 Weakly correlated
471 X7B_LINE 2 n.s 319.0 Weakly correlated
472 X7C_LINE 2 * 319.0 Weakly correlated
473 X9_LINE 2 * 319.0 Weakly correlated
474 AluSq4 1 n.s 74.0 Weakly correlated
475 AluYb8 1 n.s 15.2 Weakly correlated
476 AluYf1 1 n.s 19.6 Weakly correlated
477 AluYk11 1 n.s 15.2 Weakly correlated
478 AluYk3 1 n.s 19.6 Weakly correlated
479 CR1-16_AMi 1 n.s 319.0 Weakly correlated
480 HERV-Fc1_LTR3 1 *** 8.6 Weakly correlated
481 HERV1_LTRa 1 ** 28.9 Highly correlated
482 HERV1_LTRd 1 ** 43.0 Moderately correlated
483 HERV1_LTRe 1 ** 43.0 Moderately correlated
484 HERV30-int 1 n.s 28.9 Highly correlated
485 HERV35I-int 1 n.s 43.0 Moderately correlated
486 HERV4_I-int 1 n.s 43.0 Moderately correlated
487 HERV9NC-int 1 n.s 19.6 Weakly correlated
488 HERVH48-int 1 n.s 28.9 Highly correlated
489 HERVI-int 1 n.s 28.9 Highly correlated
490 HERVK14C-int 1 n.s 28.9 Highly correlated
491 Harlequin-int 1 n.s 74.0 Weakly correlated
492 L1M2a 1 n.s 87.0 Weakly correlated
493 L1M3c 1 n.s 99.0 Weakly correlated
494 L1M4a1 1 n.s 99.0 Weakly correlated
495 L1ME3D 1 n.s 99.0 Weakly correlated
496 L1P4a 1 n.s 74.0 Weakly correlated
497 L1P4b 1 n.s 74.0 Weakly correlated
498 L1PA8A 1 n.s 74.0 Weakly correlated
499 LTR103b_Mam 1 n.s 99.0 Weakly correlated
500 LTR10B 1 * 28.9 Highly correlated
501 LTR10B1 1 n.s 28.9 Highly correlated
502 LTR10D 1 n.s 28.9 Highly correlated
503 LTR12 1 n.s 28.9 Highly correlated
504 LTR12C 1 n.s 19.6 Weakly correlated
505 LTR12E 1 n.s 19.6 Weakly correlated
506 LTR15 1 n.s 28.9 Highly correlated
507 LTR17 1 n.s 28.9 Highly correlated
508 LTR19-int 1 n.s 43.0 Moderately correlated
509 LTR19B 1 n.s 43.0 Moderately correlated
510 LTR1A1 1 n.s 43.0 Moderately correlated
511 LTR1B 1 n.s 43.0 Moderately correlated
512 LTR1B0 1 n.s 43.0 Moderately correlated
513 LTR1C 1 * 43.0 Moderately correlated
514 LTR22 1 n.s 28.9 Highly correlated
515 LTR22C0 1 n.s 28.9 Highly correlated
516 LTR24B 1 n.s 74.0 Weakly correlated
517 LTR25-int 1 n.s 43.0 Moderately correlated
518 LTR26C 1 n.s 0.0 Weakly correlated
519 LTR26E 1 n.s 74.0 Weakly correlated
520 LTR27 1 n.s 43.0 Moderately correlated
521 LTR2752 1 n.s 43.0 Moderately correlated
522 LTR27D 1 n.s 43.0 Moderately correlated
523 LTR28 1 n.s 43.0 Moderately correlated
524 LTR30 1 n.s 28.9 Highly correlated
525 LTR31 1 n.s 74.0 Weakly correlated
526 LTR35 1 * 43.0 Moderately correlated
527 LTR37-int 1 n.s 99.0 Weakly correlated
528 LTR38 1 n.s 74.0 Weakly correlated
529 LTR3B_ 1 n.s 28.9 Highly correlated
530 LTR40c 1 n.s 99.0 Weakly correlated
531 LTR43 1 n.s 74.0 Weakly correlated
532 LTR45C 1 n.s 99.0 Weakly correlated
533 LTR46 1 n.s 43.0 Moderately correlated
534 LTR47A2 1 n.s 74.0 Weakly correlated
535 LTR47B 1 ** 74.0 Weakly correlated
536 LTR47B3 1 * 74.0 Weakly correlated
537 LTR48 1 n.s 74.0 Weakly correlated
538 LTR48B 1 n.s 74.0 Weakly correlated
539 LTR51 1 n.s 74.0 Weakly correlated
540 LTR53-int 1 n.s 99.0 Weakly correlated
541 LTR53B 1 n.s 99.0 Weakly correlated
542 LTR56 1 n.s 74.0 Weakly correlated
543 LTR59 1 n.s 43.0 Moderately correlated
544 LTR60B 1 n.s 74.0 Weakly correlated
545 LTR61 1 n.s 43.0 Moderately correlated
546 LTR62 1 n.s 74.0 Weakly correlated
547 LTR66 1 n.s 43.0 Moderately correlated
548 LTR68 1 n.s 99.0 Weakly correlated
549 LTR7 1 n.s 19.6 Weakly correlated
550 LTR72B 1 n.s 74.0 Weakly correlated
551 LTR73 1 n.s 99.0 Weakly correlated
552 LTR75 1 n.s 99.0 Weakly correlated
553 LTR7B 1 n.s 28.9 Highly correlated
554 LTR7Y 1 n.s 8.6 Weakly correlated
555 LTR81 1 n.s 99.0 Weakly correlated
556 LTR81AB 1 n.s 99.0 Weakly correlated
557 LTR81C 1 n.s 99.0 Weakly correlated
558 LTR85c 1 n.s 99.0 Weakly correlated
559 LTR86A1 1 n.s 99.0 Weakly correlated
560 LTR86A2 1 n.s 99.0 Weakly correlated
561 LTR86B1 1 n.s 99.0 Weakly correlated
562 LTR86B2 1 n.s 99.0 Weakly correlated
563 LTR91 1 n.s 99.0 Weakly correlated
564 LTR9D 1 n.s 43.0 Moderately correlated
565 MER34 1 n.s 87.0 Weakly correlated
566 MER34A 1 n.s 99.0 Weakly correlated
567 MER34B 1 n.s 87.0 Weakly correlated
568 MER4A1 1 n.s 74.0 Weakly correlated
569 MER4C 1 n.s 74.0 Weakly correlated
570 MER4CL34 1 n.s 43.0 Moderately correlated
571 MER4E 1 n.s 74.0 Weakly correlated
572 MER4E1 1 n.s 74.0 Weakly correlated
573 MER50C 1 * 43.0 Moderately correlated
574 MER51-int 1 n.s 43.0 Moderately correlated
575 MER51D 1 n.s 43.0 Moderately correlated
576 MER52-int 1 n.s 99.0 Weakly correlated
577 MER52D 1 n.s 74.0 Weakly correlated
578 MER57A-int 1 n.s 43.0 Moderately correlated
579 MER57C2 1 n.s 87.0 Weakly correlated
580 MER61A 1 n.s 43.0 Moderately correlated
581 MER61D 1 n.s 43.0 Moderately correlated
582 MER61F 1 n.s 43.0 Moderately correlated
583 MER66D 1 n.s 43.0 Moderately correlated
584 MER68C 1 n.s 99.0 Weakly correlated
585 MER72B 1 n.s 43.0 Moderately correlated
586 MER73 1 n.s 87.0 Weakly correlated
587 MER74C 1 n.s 99.0 Weakly correlated
588 MER83 1 n.s 43.0 Moderately correlated
589 MER83A-int 1 n.s 99.0 Weakly correlated
590 MER83B 1 * 43.0 Moderately correlated
591 MER84-int 1 n.s 74.0 Weakly correlated
592 MER89-int 1 n.s 99.0 Weakly correlated
593 MER92-int 1 n.s 99.0 Weakly correlated
594 MER92D 1 n.s 99.0 Weakly correlated
595 MER9B 1 * 28.9 Highly correlated
596 MER9a1 1 n.s 19.6 Weakly correlated
597 MLT-int 1 n.s 99.0 Weakly correlated
598 MLT1A-int 1 n.s 99.0 Weakly correlated
599 MLT1B-int 1 n.s 99.0 Weakly correlated
600 MLT1C-int 1 n.s 94.0 Weakly correlated
601 MLT1E1 1 n.s 99.0 Weakly correlated
602 MLT1E1A-int 1 * 99.0 Weakly correlated
603 MLT1E2-int 1 n.s 99.0 Weakly correlated
604 MLT1F-int 1 n.s 99.0 Weakly correlated
605 MLT1G-int 1 n.s 99.0 Weakly correlated
606 MLT1G3-int 1 n.s 99.0 Weakly correlated
607 MLT2C2 1 n.s 99.0 Weakly correlated
608 MLT2E 1 n.s 99.0 Weakly correlated
609 MST-int 1 n.s 74.0 Weakly correlated
610 MSTA-int 1 n.s 43.0 Moderately correlated
611 MSTA1 1 n.s 74.0 Weakly correlated
612 MSTB2 1 n.s 74.0 Weakly correlated
613 MSTC-int 1 n.s 74.0 Weakly correlated
614 MamGyp-int 1 n.s 99.0 Weakly correlated
615 MamGypLTR1d 1 n.s 99.0 Weakly correlated
616 Mam_R4 1 n.s 99.0 Weakly correlated
617 PRIMA4-int 1 n.s 74.0 Weakly correlated
618 PRIMA41-int 1 n.s 74.0 Weakly correlated
619 PrimLTR79 1 * 74.0 Weakly correlated
620 SVA_D 1 n.s 15.2 Weakly correlated
621 SVA_F 1 n.s 0.0 Weakly correlated
622 THE1-int 1 n.s 43.0 Moderately correlated
623 THE1C 1 n.s 43.0 Moderately correlated
624 UCON51 1 ** 319.0 Weakly correlated
625 X8_LINE 1 * 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 192 n.s 99.0 Weakly correlated
2 L2b 119 n.s 99.0 Weakly correlated
3 L2c 117 n.s 99.0 Weakly correlated
4 L1PA7 78 n.s 74.0 Weakly correlated
5 MIRb 77 n.s 99.0 Weakly correlated
6 MIRc 54 n.s 99.0 Weakly correlated
7 MIR 50 n.s 99.0 Weakly correlated
8 L1PA6 46 n.s 28.9 Highly correlated
9 L1PA3 35 n.s 19.6 Weakly correlated
10 AluJb 29 n.s 74.0 Weakly correlated
11 L1PA4 26 n.s 19.6 Weakly correlated
12 L3 19 n.s 99.0 Weakly correlated
13 L1ME1 19 n.s 99.0 Weakly correlated
14 L1P2 19 n.s 28.9 Highly correlated
15 AluJr 18 n.s 74.0 Weakly correlated
16 HAL1 17 n.s 99.0 Weakly correlated
17 L2 16 n.s 99.0 Weakly correlated
18 LTR33 15 n.s 99.0 Weakly correlated
19 MIR3 15 n.s 99.0 Weakly correlated
20 L1M1 15 n.s 74.0 Weakly correlated
21 L1PB1 14 n.s 74.0 Weakly correlated
22 LTR40a 14 ** 99.0 Weakly correlated
23 MamRTE1 13 n.s 99.0 Weakly correlated
24 AluSz 13 n.s 74.0 Weakly correlated
25 L1ME3G 12 n.s 99.0 Weakly correlated
26 L1M5 12 n.s 99.0 Weakly correlated
27 LTR3A 11 **** 28.9 Highly correlated
28 L1ME4b 11 n.s 99.0 Weakly correlated
29 AluSx1 11 n.s 74.0 Weakly correlated
30 L1MB7 11 n.s 99.0 Weakly correlated
31 L1PA5 11 n.s 19.6 Weakly correlated
32 L1MC4 10 n.s 99.0 Weakly correlated
33 L1MC5a 10 n.s 99.0 Weakly correlated
34 L1ME3 10 n.s 99.0 Weakly correlated
35 AluSx 10 n.s 74.0 Weakly correlated
36 L1M4 10 n.s 99.0 Weakly correlated
37 L1MEd 9 n.s 99.0 Weakly correlated
38 MER11A 9 n.s 28.9 Highly correlated
39 L1MEg 8 n.s 99.0 Weakly correlated
40 L4_A_Mam 8 n.s 99.0 Weakly correlated
41 L1MA3 8 n.s 74.0 Weakly correlated
42 L1MB3 8 n.s 99.0 Weakly correlated
43 L1P3 8 n.s 74.0 Weakly correlated
44 MLT1H 8 n.s 99.0 Weakly correlated
45 MLT1K 8 n.s 99.0 Weakly correlated
46 L1P1 7 n.s 19.6 Weakly correlated
47 MLT1H2 7 n.s 99.0 Weakly correlated
48 AluJo 7 n.s 74.0 Weakly correlated
49 HERVH-int 7 n.s 28.9 Highly correlated
50 L1PA16 7 n.s 74.0 Weakly correlated
51 LTR16C 7 n.s 99.0 Weakly correlated
52 L1MA2 6 n.s 74.0 Weakly correlated
53 L1MC5 6 n.s 99.0 Weakly correlated
54 HAL1ME 6 n.s 99.0 Weakly correlated
55 L1ME3A 6 n.s 99.0 Weakly correlated
56 MLT1C 6 n.s 94.0 Weakly correlated
57 L1MCa 6 n.s 99.0 Weakly correlated
58 L1ME2 6 n.s 99.0 Weakly correlated
59 L1MD2 6 n.s 99.0 Weakly correlated
60 MLT1J 6 n.s 99.0 Weakly correlated
61 L1ME4a 6 n.s 99.0 Weakly correlated
62 L1MEc 6 n.s 99.0 Weakly correlated
63 L1MC4a 6 n.s 99.0 Weakly correlated
64 LTR3 5 **** 28.9 Highly correlated
65 MLT1I 5 n.s 99.0 Weakly correlated
66 MLT1J1 5 n.s 99.0 Weakly correlated
67 L4_C_Mam 5 n.s 99.0 Weakly correlated
68 MER21C 5 n.s 99.0 Weakly correlated
69 MER110 5 ** 99.0 Weakly correlated
70 MLT1F2 5 n.s 99.0 Weakly correlated
71 AmnSINE1 5 * 319.0 Weakly correlated
72 L1MA1 5 n.s 74.0 Weakly correlated
73 L1MC3 5 n.s 99.0 Weakly correlated
74 MIR1_Amn 5 n.s 319.0 Weakly correlated
75 MamGypsy2-I 5 n.s 99.0 Weakly correlated
76 L1MC1 5 n.s 99.0 Weakly correlated
77 L1MEf 4 n.s 99.0 Weakly correlated
78 L1PA2 4 n.s 15.2 Weakly correlated
79 L1ME3B 4 n.s 99.0 Weakly correlated
80 LTR22E 4 *** 28.9 Highly correlated
81 MER39 4 n.s 74.0 Weakly correlated
82 LTR8B 4 n.s 43.0 Moderately correlated
83 MamRep605 4 n.s 99.0 Weakly correlated
84 ERVL-B4-int 4 n.s 99.0 Weakly correlated
85 L1MB8 4 n.s 99.0 Weakly correlated
86 MER4-int 4 n.s 74.0 Weakly correlated
87 MER4A 4 n.s 74.0 Weakly correlated
88 AluSz6 4 n.s 74.0 Weakly correlated
89 ERVL-E-int 4 n.s 99.0 Weakly correlated
90 L1ME2z 4 n.s 99.0 Weakly correlated
91 L1ME3Cz 4 n.s 99.0 Weakly correlated
92 L1PA8 4 n.s 74.0 Weakly correlated
93 MamSINE1 4 n.s 99.0 Weakly correlated
94 HERV17-int 4 n.s 28.9 Highly correlated
95 L1MB5 4 n.s 99.0 Weakly correlated
96 LTR10A 4 * 28.9 Highly correlated
97 LTR3B 4 **** 28.9 Highly correlated
98 LTR90A 4 *** 99.0 Weakly correlated
99 MER49 4 n.s 43.0 Moderately correlated
100 HERVK11-int 3 n.s 28.9 Highly correlated
101 LTR8 3 n.s 43.0 Moderately correlated
102 MER21A 3 n.s 74.0 Weakly correlated
103 MER31B 3 n.s 99.0 Weakly correlated
104 MLT1J2 3 n.s 99.0 Weakly correlated
105 L1MA4A 3 n.s 87.0 Weakly correlated
106 L1MC2 3 n.s 99.0 Weakly correlated
107 L1MD3 3 n.s 99.0 Weakly correlated
108 LTR53 3 n.s 99.0 Weakly correlated
109 LTR82B 3 n.s 99.0 Weakly correlated
110 MLT1D 3 n.s 99.0 Weakly correlated
111 HAL1b 3 n.s 99.0 Weakly correlated
112 L1MA4 3 n.s 87.0 Weakly correlated
113 L1MA8 3 n.s 87.0 Weakly correlated
114 L1ME4c 3 n.s 99.0 Weakly correlated
115 MER77 3 n.s 99.0 Weakly correlated
116 MLT1L 3 n.s 99.0 Weakly correlated
117 AluSx3 3 n.s 74.0 Weakly correlated
118 L1MB2 3 n.s 99.0 Weakly correlated
119 L1ME3E 3 n.s 99.0 Weakly correlated
120 MER11B 3 n.s 19.6 Weakly correlated
121 MER50 3 n.s 43.0 Moderately correlated
122 AluSp 3 n.s 74.0 Weakly correlated
123 LOR1-int 3 n.s 74.0 Weakly correlated
124 HERVK3-int 3 n.s 28.9 Highly correlated
125 MSTA 3 n.s 43.0 Moderately correlated
126 L1PA15 3 n.s 74.0 Weakly correlated
127 LTR28B 3 n.s 43.0 Moderately correlated
128 MER54B 3 n.s 87.0 Weakly correlated
129 L1HS 3 n.s 8.6 Weakly correlated
130 L1MEb 3 n.s 99.0 Weakly correlated
131 MER61-int 3 n.s 43.0 Moderately correlated
132 MLT1N2 3 n.s 99.0 Weakly correlated
133 LFSINE_Vert 2 n.s 319.0 Weakly correlated
134 LTR64 2 n.s 74.0 Weakly correlated
135 MER39B 2 n.s 74.0 Weakly correlated
136 MER57B2 2 n.s 43.0 Moderately correlated
137 MER57E1 2 n.s 87.0 Weakly correlated
138 MER67B 2 n.s 99.0 Weakly correlated
139 MER68B 2 n.s 99.0 Weakly correlated
140 MER90a 2 n.s 99.0 Weakly correlated
141 MLT1E3 2 n.s 99.0 Weakly correlated
142 AluSg 2 n.s 74.0 Weakly correlated
143 FLAM_C 2 n.s 74.0 Weakly correlated
144 L1MEh 2 n.s 99.0 Weakly correlated
145 LTR22B 2 * 28.9 Highly correlated
146 LTR44 2 * 74.0 Weakly correlated
147 MLT1H1 2 n.s 99.0 Weakly correlated
148 Penelope1_Vert 2 n.s 319.0 Weakly correlated
149 AluJr4 2 n.s 74.0 Weakly correlated
150 AluSq2 2 n.s 74.0 Weakly correlated
151 ERV3-16A3_I-int 2 n.s 99.0 Weakly correlated
152 L1M4c 2 n.s 99.0 Weakly correlated
153 L1ME3C 2 n.s 99.0 Weakly correlated
154 HERVK9-int 2 n.s 28.9 Highly correlated
155 L1PA15-16 2 n.s 74.0 Weakly correlated
156 L1PA17 2 n.s 74.0 Weakly correlated
157 MER41C 2 n.s 74.0 Weakly correlated
158 MER67C 2 n.s 99.0 Weakly correlated
159 MLT2D 2 n.s 99.0 Weakly correlated
160 MSTB1 2 n.s 74.0 Weakly correlated
161 MamGypLTR3a 2 n.s 99.0 Weakly correlated
162 L1MD1 2 n.s 99.0 Weakly correlated
163 L1PA10 2 n.s 74.0 Weakly correlated
164 L1PBa1 2 n.s 74.0 Weakly correlated
165 L1PREC2 2 n.s 43.0 Moderately correlated
166 LTR1D 2 n.s 43.0 Moderately correlated
167 LTR33A_ 2 n.s 99.0 Weakly correlated
168 LTR85a 2 n.s 99.0 Weakly correlated
169 MER11C 2 n.s 19.6 Weakly correlated
170 MER34A1 2 n.s 99.0 Weakly correlated
171 MER70A 2 n.s 87.0 Weakly correlated
172 MLT2F 2 n.s 99.0 Weakly correlated
173 L1M3 2 n.s 99.0 Weakly correlated
174 LTR39 2 n.s 43.0 Moderately correlated
175 LTR40b 2 n.s 99.0 Weakly correlated
176 LTR47B2 2 * 74.0 Weakly correlated
177 MER110A 2 n.s 99.0 Weakly correlated
178 MER31-int 2 n.s 99.0 Weakly correlated
179 MER4D1 2 n.s 74.0 Weakly correlated
180 MER50-int 2 n.s 43.0 Moderately correlated
181 MER57F 2 n.s 74.0 Weakly correlated
182 MLT1H2-int 2 n.s 99.0 Weakly correlated
183 MLT2B4 2 n.s 99.0 Weakly correlated
184 L1MA7 2 n.s 87.0 Weakly correlated
185 LTR41 2 n.s 99.0 Weakly correlated
186 LTR50 2 n.s 99.0 Weakly correlated
187 LTR78 2 n.s 99.0 Weakly correlated
188 MER101 2 n.s 74.0 Weakly correlated
189 MER51B 2 n.s 43.0 Moderately correlated
190 AluSc8 2 n.s 74.0 Weakly correlated
191 HERV3-int 2 n.s 28.9 Highly correlated
192 L1MA9 2 n.s 99.0 Weakly correlated
193 LTR16A2 2 n.s 99.0 Weakly correlated
194 LTR33A 2 n.s 99.0 Weakly correlated
195 LTR47A 2 n.s 74.0 Weakly correlated
196 LTR80A 2 n.s 99.0 Weakly correlated
197 MER41B 2 n.s 74.0 Weakly correlated
198 MER89 2 n.s 99.0 Weakly correlated
199 MLT1B 2 n.s 99.0 Weakly correlated
200 MLT1O 2 n.s 99.0 Weakly correlated
201 CR1-3_Croc 1 n.s 319.0 Weakly correlated
202 L1M2c 1 n.s 87.0 Weakly correlated
203 L1MB1 1 n.s 99.0 Weakly correlated
204 L1PA13 1 n.s 74.0 Weakly correlated
205 L1PBa 1 n.s 74.0 Weakly correlated
206 LTR108a_Mam 1 * 99.0 Weakly correlated
207 LTR22A 1 n.s 43.0 Moderately correlated
208 LTR33C 1 n.s 99.0 Weakly correlated
209 LTR40A1 1 n.s 99.0 Weakly correlated
210 LTR48 1 n.s 74.0 Weakly correlated
211 LTR49-int 1 n.s 74.0 Weakly correlated
212 LTR5_Hs 1 n.s 0.0 Weakly correlated
213 LTR81B 1 n.s 99.0 Weakly correlated
214 LTR86A1 1 n.s 99.0 Weakly correlated
215 LTR88a 1 n.s 99.0 Weakly correlated
216 LTR9B 1 n.s 43.0 Moderately correlated
217 MER89-int 1 n.s 99.0 Weakly correlated
218 MLT1G1 1 n.s 99.0 Weakly correlated
219 MLT2B3 1 n.s 99.0 Weakly correlated
220 ERV24_Prim-int 1 n.s 74.0 Weakly correlated
221 HERVIP10FH-int 1 n.s 28.9 Highly correlated
222 L1MCc 1 n.s 99.0 Weakly correlated
223 L1MD 1 n.s 99.0 Weakly correlated
224 L1PB 1 n.s 74.0 Weakly correlated
225 LTR18B 1 n.s 43.0 Moderately correlated
226 LTR32 1 n.s 43.0 Moderately correlated
227 LTR53-int 1 n.s 99.0 Weakly correlated
228 LTR7Y 1 n.s 8.6 Weakly correlated
229 LTR82A 1 n.s 99.0 Weakly correlated
230 MER57C1 1 n.s 74.0 Weakly correlated
231 MER57C2 1 n.s 87.0 Weakly correlated
232 MER66C 1 n.s 43.0 Moderately correlated
233 MER84-int 1 n.s 74.0 Weakly correlated
234 MamGypLTR1a 1 n.s 99.0 Weakly correlated
235 MamGypsy2-LTR 1 n.s 99.0 Weakly correlated
236 THE1D 1 n.s 43.0 Moderately correlated
237 X7A_LINE 1 n.s 319.0 Weakly correlated
238 HERV15-int 1 n.s 28.9 Highly correlated
239 HERV1_I-int 1 n.s 43.0 Moderately correlated
240 L1M8 1 n.s 99.0 Weakly correlated
241 L1MCb 1 n.s 99.0 Weakly correlated
242 L1PA12 1 n.s 74.0 Weakly correlated
243 L3b 1 n.s 99.0 Weakly correlated
244 LTR3B_ 1 n.s 28.9 Highly correlated
245 LTR4 1 n.s 28.9 Highly correlated
246 LTR72 1 n.s 74.0 Weakly correlated
247 LTR81A 1 n.s 99.0 Weakly correlated
248 LTR88b 1 n.s 99.0 Weakly correlated
249 LTR9D 1 n.s 43.0 Moderately correlated
250 MER101B 1 n.s 87.0 Weakly correlated
251 MER21B 1 n.s 99.0 Weakly correlated
252 MER34-int 1 n.s 99.0 Weakly correlated
253 MER67A 1 n.s 99.0 Weakly correlated
254 MLT1G3-int 1 n.s 99.0 Weakly correlated
255 MSTC 1 n.s 74.0 Weakly correlated
256 MamGypLTR1b 1 n.s 99.0 Weakly correlated
257 AluSg4 1 n.s 74.0 Weakly correlated
258 ERVL47-int 1 n.s 74.0 Weakly correlated
259 L1M3f 1 n.s 87.0 Weakly correlated
260 L1MDb 1 n.s 99.0 Weakly correlated
261 L1PA11 1 n.s 74.0 Weakly correlated
262 LOR1a 1 n.s 74.0 Weakly correlated
263 LTR10B 1 * 28.9 Highly correlated
264 LTR19A 1 n.s 43.0 Moderately correlated
265 LTR24 1 n.s 74.0 Weakly correlated
266 LTR41B 1 n.s 99.0 Weakly correlated
267 LTR61 1 n.s 43.0 Moderately correlated
268 LTR7B 1 n.s 28.9 Highly correlated
269 LTR80B 1 n.s 99.0 Weakly correlated
270 MER11D 1 n.s 19.6 Weakly correlated
271 MER70B 1 n.s 87.0 Weakly correlated
272 MLT1A1-int 1 n.s 87.0 Weakly correlated
273 MLT1B-int 1 n.s 99.0 Weakly correlated
274 MLT1G3 1 n.s 99.0 Weakly correlated
275 MLT1H1-int 1 n.s 99.0 Weakly correlated
276 THE1B 1 n.s 43.0 Moderately correlated
277 X6B_LINE 1 n.s 99.0 Weakly correlated
278 Alu 1 n.s 74.0 Weakly correlated
279 HERVIP10F-int 1 n.s 28.9 Highly correlated
280 L1MEa 1 n.s 99.0 Weakly correlated
281 L2-1_AMi 1 n.s 319.0 Weakly correlated
282 L4_B_Mam 1 n.s 99.0 Weakly correlated
283 LTR26 1 n.s 74.0 Weakly correlated
284 LTR33B 1 n.s 99.0 Weakly correlated
285 LTR47B3 1 * 74.0 Weakly correlated
286 LTR62 1 n.s 74.0 Weakly correlated
287 MER34C2 1 n.s 74.0 Weakly correlated
288 MER4B 1 n.s 74.0 Weakly correlated
289 MER4D 1 n.s 74.0 Weakly correlated
290 MER65A 1 n.s 74.0 Weakly correlated
291 MER92-int 1 n.s 99.0 Weakly correlated
292 MLT2B2 1 n.s 99.0 Weakly correlated
293 MSTB 1 n.s 43.0 Moderately correlated
294 AluSc 1 n.s 74.0 Weakly correlated
295 L1M4a2 1 n.s 99.0 Weakly correlated
296 L1ME5 1 n.s 99.0 Weakly correlated
297 L1MEj 1 n.s 99.0 Weakly correlated
298 LTR37B 1 n.s 99.0 Weakly correlated
299 LTR41C 1 n.s 99.0 Weakly correlated
300 LTR67B 1 n.s 99.0 Weakly correlated
301 LTR83 1 n.s 99.0 Weakly correlated
302 LTR89 1 n.s 99.0 Weakly correlated
303 LTR9A1 1 n.s 43.0 Moderately correlated
304 MER65-int 1 n.s 87.0 Weakly correlated
305 MER68 1 n.s 99.0 Weakly correlated
306 MER74A 1 n.s 99.0 Weakly correlated
307 MER77B 1 n.s 99.0 Weakly correlated
308 MLT1A0 1 n.s 99.0 Weakly correlated
309 MLT1A0-int 1 n.s 99.0 Weakly correlated
310 MLT1H-int 1 n.s 99.0 Weakly correlated
311 PABL_B 1 n.s 43.0 Moderately correlated
312 HERV35I-int 1 n.s 43.0 Moderately correlated
313 HERVL40-int 1 n.s 99.0 Weakly correlated
314 L1MA6 1 n.s 87.0 Weakly correlated
315 L1P4b 1 n.s 74.0 Weakly correlated
316 LTR16 1 n.s 99.0 Weakly correlated
317 LTR35A 1 * 43.0 Moderately correlated
318 LTR65 1 n.s 99.0 Weakly correlated
319 LTR66 1 n.s 43.0 Moderately correlated
320 LTR79 1 n.s 99.0 Weakly correlated
321 MER61B 1 n.s 43.0 Moderately correlated
322 MER68-int 1 n.s 99.0 Weakly correlated
323 MLT2B1 1 n.s 99.0 Weakly correlated
324 MamGypLTR1c 1 n.s 99.0 Weakly correlated
325 X8_LINE 1 * 319.0 Weakly correlated
326 X9_LINE 1 n.s 319.0 Weakly correlated
327 FAM 1 n.s 87.0 Weakly correlated
328 HERVE-int 1 n.s 19.6 Weakly correlated
329 HERVK14-int 1 n.s 28.9 Highly correlated
330 L1M2 1 n.s 99.0 Weakly correlated
331 L1M4b 1 n.s 99.0 Weakly correlated
332 L1ME3D 1 n.s 99.0 Weakly correlated
333 L1PA14 1 n.s 74.0 Weakly correlated
334 LTR101_Mam 1 n.s 99.0 Weakly correlated
335 LTR104_Mam 1 n.s 99.0 Weakly correlated
336 LTR16A 1 n.s 99.0 Weakly correlated
337 LTR30 1 n.s 28.9 Highly correlated
338 LTR36 1 n.s 74.0 Weakly correlated
339 LTR40c 1 n.s 99.0 Weakly correlated
340 LTR52-int 1 n.s 99.0 Weakly correlated
341 LTR75B 1 n.s 99.0 Weakly correlated
342 LTR81C 1 n.s 99.0 Weakly correlated
343 MER65C 1 n.s 74.0 Weakly correlated
344 MER66-int 1 n.s 43.0 Moderately correlated
345 MER83A-int 1 n.s 99.0 Weakly correlated
346 MER92B 1 n.s 99.0 Weakly correlated
347 MLT1G 1 n.s 99.0 Weakly correlated
348 MST-int 1 n.s 74.0 Weakly correlated
349 MSTD 1 n.s 74.0 Weakly correlated
350 PRIMA41-int 1 n.s 74.0 Weakly correlated
351 X7B_LINE 1 n.s 319.0 Weakly correlated
352 X7C_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUJB 74.0 Weakly correlated
2 ALUJO 74.0 Weakly correlated
3 ALUJR 74.0 Weakly correlated
4 ALUSX1 74.0 Weakly correlated
5 ALUSZ 74.0 Weakly correlated
6 HAL1 99.0 Weakly correlated
7 HAL1ME 99.0 Weakly correlated
8 HERVH-INT 28.9 Highly correlated
9 L1M1 74.0 Weakly correlated
10 L1M4 99.0 Weakly correlated
11 L1M5 99.0 Weakly correlated
12 L1MA3 74.0 Weakly correlated
13 L1MB3 99.0 Weakly correlated
14 L1MB7 99.0 Weakly correlated
15 L1MC4 99.0 Weakly correlated
16 L1MC4A 99.0 Weakly correlated
17 L1MC5 99.0 Weakly correlated
18 L1MC5A 99.0 Weakly correlated
19 L1MCA 99.0 Weakly correlated
20 L1MD2 99.0 Weakly correlated
21 L1ME2 99.0 Weakly correlated
22 L1ME3 99.0 Weakly correlated
23 L1ME3G 99.0 Weakly correlated
24 L1ME4A 99.0 Weakly correlated
25 L1ME4B 99.0 Weakly correlated
26 L1MEC 99.0 Weakly correlated
27 L1MED 99.0 Weakly correlated
28 L1MEG 99.0 Weakly correlated
29 L1P1 19.6 Weakly correlated
30 L1P2 28.9 Highly correlated
31 L1P3 74.0 Weakly correlated
32 L1PA3 19.6 Weakly correlated
33 L1PA4 19.6 Weakly correlated
34 L1PA5 19.6 Weakly correlated
35 L1PA6 28.9 Highly correlated
36 L1PA7 74.0 Weakly correlated
37 L1PB1 74.0 Weakly correlated
38 L2A 99.0 Weakly correlated
39 L2B 99.0 Weakly correlated
40 L3 99.0 Weakly correlated
41 L4_A_MAM 99.0 Weakly correlated
42 LTR33 99.0 Weakly correlated
43 LTR3A 28.9 Highly correlated
44 MER11A 28.9 Highly correlated
45 MIR3 99.0 Weakly correlated
46 MLT1H2 99.0 Weakly correlated
47 MAMRTE1 99.0 Weakly correlated