ZRdb KZFP & Repeats
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Human_ZNF264

  • Protein
    Zinc finger protein 264
  • Length
    627
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    99.0 Mya
  • Uniprot_ID
    O43296
  • NCBI_ID
    9422
Sequence:
MAAAVLTDRAQVSVTFDDVAVTFTKEEWGQLDLAQRTLYQEVMLENCGLLVSLGCPVPKAELICHLEHGQEPWTRKEDLSQDTCPGDKGKPKTTEPTTCEPALSEGISLQGQVTQGNSVDSQLGQAEDQDGLSEMQEGHFRPGIDPQEKSPGKMSPECDGLGTADGVCSRIGQEQVSPGDRVRSHNSCESGKDPMIQEEENNFKCSECGKVFNKKHLLAGHEKIHSGVKPYECTECGKTFIKSTHLLQHHMIHTGERPYECMECGKAFNRKSYLTQHQRIHSGEKPYKCNECGKAFTHRSNFVLHNRRHTGEKSFVCTECGQVFRHRPGFLRHYVVHSGENPYECLECGKVFKHRSYLMWHQQTHTGEKPYECSECGKVFLESAALIHHYVIHTGEKPFECLECGKAFNHRSYLKRHQRIHTGEKPFVCSECGKAFTHCSTFILHKRAHTGEKPFECKECGKAFSNRKDLIRHFSIHTGEKPYECVECGKAFTRMSGLTRHKRIHSGEKPYECVECGKSFCWSTNLIRHAIIHTGEKPYKCSECGKAFSRSSSLTQHQRMHTGKNPISVTDVGRPFTSGQTSVTLRELLLGKDFLNVTTEANILPEETSSSASDQPYQRETPQVSSL
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 14..85
2 C2h2 203..225
3 C2h2 231..253
4 C2h2 259..281
5 C2h2 287..309
6 C2h2 315..337
7 C2h2 343..365
8 C2h2 371..393
9 C2h2 399..421
10 C2h2 427..449
11 C2h2 455..477
12 C2h2 483..505
13 C2h2 511..533
14 C2h2 539..561
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MLT1A0 541 **** 99.0 Highly correlated
2 MLT1A 265 **** 99.0 Highly correlated
3 AluSx1 181 **** 74.0 Weakly correlated
4 MIRb 179 **** 99.0 Highly correlated
5 AluSx 171 **** 74.0 Weakly correlated
6 AluJb 168 **** 74.0 Weakly correlated
7 L2a 132 n.s 99.0 Highly correlated
8 AluSz 119 n.s 74.0 Weakly correlated
9 AluY 118 n.s 74.0 Weakly correlated
10 L2c 114 n.s 99.0 Highly correlated
11 L1MEd 111 **** 99.0 Highly correlated
12 MIR 104 n.s 99.0 Highly correlated
13 MLT1B 91 **** 99.0 Highly correlated
14 L2b 89 ** 99.0 Highly correlated
15 AluJo 85 ** 74.0 Weakly correlated
16 AluJr 80 n.s 74.0 Weakly correlated
17 MIRc 75 **** 99.0 Highly correlated
18 AluSp 74 ** 74.0 Weakly correlated
19 L2 72 * 99.0 Highly correlated
20 MIR3 71 **** 99.0 Highly correlated
21 AluSq2 56 n.s 74.0 Weakly correlated
22 AluSx3 55 **** 74.0 Weakly correlated
23 AluSz6 51 n.s 74.0 Weakly correlated
24 AluSg 48 n.s 74.0 Weakly correlated
25 AluSc 41 n.s 74.0 Weakly correlated
26 AluSc8 38 ** 74.0 Weakly correlated
27 AluSq 35 ** 74.0 Weakly correlated
28 LTR10F 34 **** 28.9 Weakly correlated
29 LTR8 33 **** 43.0 Weakly correlated
30 MLT1A1 32 **** 87.0 Weakly correlated
31 L1ME1 29 n.s 99.0 Highly correlated
32 LTR10A 29 **** 28.9 Weakly correlated
33 L1MC4 27 n.s 99.0 Highly correlated
34 L1M5 26 n.s 99.0 Highly correlated
35 L1MB7 22 n.s 99.0 Highly correlated
36 L3 22 n.s 99.0 Highly correlated
37 FLAM_C 19 * 74.0 Weakly correlated
38 L1PA3 17 n.s 19.6 Weakly correlated
39 L1PA2 16 n.s 15.2 Weakly correlated
40 L1PB1 16 n.s 74.0 Weakly correlated
41 AluSg4 15 ** 74.0 Weakly correlated
42 AluSx4 15 n.s 74.0 Weakly correlated
43 L1MEi 15 *** 99.0 Highly correlated
44 MLT1K 15 n.s 99.0 Highly correlated
45 FRAM 14 **** 74.0 Weakly correlated
46 HAL1 14 n.s 99.0 Highly correlated
47 L1MB3 14 n.s 99.0 Highly correlated
48 L1ME3A 14 n.s 99.0 Highly correlated
49 L1ME4a 14 n.s 99.0 Highly correlated
50 L1MB8 13 n.s 99.0 Highly correlated
51 MLT1D 13 n.s 99.0 Highly correlated
52 AluJr4 12 n.s 74.0 Weakly correlated
53 AluSg7 12 n.s 74.0 Weakly correlated
54 L1MA9 12 n.s 99.0 Highly correlated
55 L1MB5 12 n.s 99.0 Highly correlated
56 L1ME4b 12 n.s 99.0 Highly correlated
57 L1MEf 12 n.s 99.0 Highly correlated
58 L1PA5 12 n.s 19.6 Weakly correlated
59 LTR13 12 **** 19.6 Weakly correlated
60 AluYj4 11 **** 0.0 Weakly correlated
61 FLAM_A 11 * 74.0 Weakly correlated
62 L1M2 11 n.s 99.0 Highly correlated
63 MER4-int 11 * 74.0 Weakly correlated
64 MLT1C 11 n.s 94.0 Weakly correlated
65 MSTA 11 n.s 43.0 Weakly correlated
66 MamRTE1 11 ** 99.0 Highly correlated
67 THE1B 11 n.s 43.0 Weakly correlated
68 L1M4 10 n.s 99.0 Highly correlated
69 L1PA15 10 n.s 74.0 Weakly correlated
70 LTR8B 10 *** 43.0 Weakly correlated
71 MIR1_Amn 10 ** 319.0 Weakly correlated
72 MSTB1 10 * 74.0 Weakly correlated
73 L1ME3Cz 9 n.s 99.0 Highly correlated
74 L1ME3G 9 n.s 99.0 Highly correlated
75 L1PA7 9 n.s 74.0 Weakly correlated
76 LTR71B 9 **** 43.0 Weakly correlated
77 MLT1H 9 n.s 99.0 Highly correlated
78 MLT1J 9 n.s 99.0 Highly correlated
79 MSTB 9 n.s 43.0 Weakly correlated
80 AluYm1 8 n.s 19.6 Weakly correlated
81 L1MB2 8 n.s 99.0 Highly correlated
82 L1MEc 8 n.s 99.0 Highly correlated
83 L1P4 8 n.s 74.0 Weakly correlated
84 L3b 8 n.s 99.0 Highly correlated
85 LTR41C 8 **** 99.0 Highly correlated
86 MLT1F 8 n.s 99.0 Highly correlated
87 MLT1I 8 n.s 99.0 Highly correlated
88 L1M1 7 n.s 74.0 Weakly correlated
89 L1M4b 7 n.s 99.0 Highly correlated
90 L1MA8 7 n.s 87.0 Weakly correlated
91 L1MC5 7 n.s 99.0 Highly correlated
92 L1MD 7 n.s 99.0 Highly correlated
93 L1ME3 7 n.s 99.0 Highly correlated
94 L1ME3F 7 n.s 99.0 Highly correlated
95 L1P1 7 n.s 19.6 Weakly correlated
96 L1PA8 7 n.s 74.0 Weakly correlated
97 ERV3-16A3_I-int 6 n.s 99.0 Highly correlated
98 L1MA4 6 n.s 87.0 Weakly correlated
99 L1MA4A 6 n.s 87.0 Weakly correlated
100 L1MB4 6 n.s 99.0 Highly correlated
101 L1MC3 6 n.s 99.0 Highly correlated
102 L1MC5a 6 n.s 99.0 Highly correlated
103 L1ME2 6 n.s 99.0 Highly correlated
104 L1MEg 6 n.s 99.0 Highly correlated
105 L1PA13 6 n.s 74.0 Weakly correlated
106 L1PA4 6 n.s 19.6 Weakly correlated
107 L4_A_Mam 6 n.s 99.0 Highly correlated
108 LTR33A 6 ** 99.0 Highly correlated
109 MLT1L 6 n.s 99.0 Highly correlated
110 PRIMA4-int 6 **** 74.0 Weakly correlated
111 AluSq4 5 * 74.0 Weakly correlated
112 AluYc 5 n.s 74.0 Weakly correlated
113 FAM 5 * 87.0 Weakly correlated
114 HERVIP10FH-int 5 ** 28.9 Weakly correlated
115 HERVL40-int 5 * 99.0 Highly correlated
116 L1MD2 5 n.s 99.0 Highly correlated
117 L1ME2z 5 n.s 99.0 Highly correlated
118 L1ME3B 5 n.s 99.0 Highly correlated
119 L1ME4c 5 n.s 99.0 Highly correlated
120 LTR12C 5 n.s 19.6 Weakly correlated
121 LTR16A1 5 * 99.0 Highly correlated
122 LTR18A 5 **** 43.0 Weakly correlated
123 LTR33 5 n.s 99.0 Highly correlated
124 MER11A 5 n.s 28.9 Weakly correlated
125 MLT1E2 5 n.s 99.0 Highly correlated
126 Plat_L3 5 * 99.0 Highly correlated
127 SVA_D 5 n.s 15.2 Weakly correlated
128 THE1C 5 n.s 43.0 Weakly correlated
129 Alu 4 ** 74.0 Weakly correlated
130 AluSc5 4 n.s 74.0 Weakly correlated
131 ERVL-B4-int 4 n.s 99.0 Highly correlated
132 HAL1ME 4 n.s 99.0 Highly correlated
133 HERV17-int 4 n.s 28.9 Weakly correlated
134 L1MA2 4 n.s 74.0 Weakly correlated
135 L1MC1 4 n.s 99.0 Highly correlated
136 L1MC2 4 n.s 99.0 Highly correlated
137 L1MCc 4 n.s 99.0 Highly correlated
138 L1PA16 4 n.s 74.0 Weakly correlated
139 LTR16C 4 n.s 99.0 Highly correlated
140 LTR37-int 4 * 99.0 Highly correlated
141 LTR37A 4 * 99.0 Highly correlated
142 LTR4 4 **** 28.9 Weakly correlated
143 LTR41B 4 ** 99.0 Highly correlated
144 MER21C 4 n.s 99.0 Highly correlated
145 MER39B 4 * 74.0 Weakly correlated
146 MER68 4 n.s 99.0 Highly correlated
147 MLT1J1 4 n.s 99.0 Highly correlated
148 MLT1O 4 n.s 99.0 Highly correlated
149 SVA_A 4 * 19.6 Weakly correlated
150 AluSq10 3 n.s 74.0 Weakly correlated
151 AluYa5 3 n.s 15.2 Weakly correlated
152 AluYa8 3 **** 15.2 Weakly correlated
153 AluYf1 3 n.s 19.6 Weakly correlated
154 AluYh3 3 n.s 15.2 Weakly correlated
155 ERV3-16A3_LTR 3 * 99.0 Highly correlated
156 ERVL-E-int 3 n.s 99.0 Highly correlated
157 HERVL74-int 3 ** 99.0 Highly correlated
158 L1M3 3 n.s 99.0 Highly correlated
159 L1MA7 3 n.s 87.0 Weakly correlated
160 L1MC 3 n.s 99.0 Highly correlated
161 L1MC4a 3 n.s 99.0 Highly correlated
162 L1MCa 3 n.s 99.0 Highly correlated
163 L1MD1 3 n.s 99.0 Highly correlated
164 L1MDb 3 n.s 99.0 Highly correlated
165 L1ME3D 3 n.s 99.0 Highly correlated
166 L1ME5 3 n.s 99.0 Highly correlated
167 L1P2 3 n.s 28.9 Weakly correlated
168 L1P4a 3 n.s 74.0 Weakly correlated
169 L1PA11 3 n.s 74.0 Weakly correlated
170 L1PA17 3 n.s 74.0 Weakly correlated
171 L1PREC2 3 n.s 43.0 Weakly correlated
172 L4_C_Mam 3 n.s 99.0 Highly correlated
173 LOR1-int 3 n.s 74.0 Weakly correlated
174 LTR16A 3 n.s 99.0 Highly correlated
175 LTR22A 3 *** 43.0 Weakly correlated
176 LTR33B 3 * 99.0 Highly correlated
177 LTR41 3 * 99.0 Highly correlated
178 LTR65 3 ** 99.0 Highly correlated
179 LTR67B 3 n.s 99.0 Highly correlated
180 LTR7 3 n.s 19.6 Weakly correlated
181 MER31A 3 n.s 87.0 Weakly correlated
182 MER41B 3 n.s 74.0 Weakly correlated
183 MER49 3 n.s 43.0 Weakly correlated
184 MER4B-int 3 n.s 99.0 Highly correlated
185 MER4D 3 n.s 74.0 Weakly correlated
186 MER51-int 3 * 43.0 Weakly correlated
187 MER68B 3 ** 99.0 Highly correlated
188 MER74A 3 n.s 99.0 Highly correlated
189 MER77B 3 n.s 99.0 Highly correlated
190 MER89 3 n.s 99.0 Highly correlated
191 MLT1F1 3 n.s 99.0 Highly correlated
192 MLT1F2 3 n.s 99.0 Highly correlated
193 MLT1G3 3 n.s 99.0 Highly correlated
194 MLT1H1 3 n.s 99.0 Highly correlated
195 MLT1J2 3 n.s 99.0 Highly correlated
196 MamGypLTR3a 3 * 99.0 Highly correlated
197 MamSINE1 3 n.s 99.0 Highly correlated
198 THE1D 3 n.s 43.0 Weakly correlated
199 AluYb8 2 n.s 15.2 Weakly correlated
200 AluYe5 2 n.s 74.0 Weakly correlated
201 HERVH48-int 2 * 28.9 Weakly correlated
202 HERVIP10F-int 2 n.s 28.9 Weakly correlated
203 L1M3c 2 n.s 99.0 Highly correlated
204 L1M3f 2 n.s 87.0 Weakly correlated
205 L1M4c 2 n.s 99.0 Highly correlated
206 L1M6 2 n.s 99.0 Highly correlated
207 L1M7 2 n.s 99.0 Highly correlated
208 L1MA5A 2 n.s 87.0 Weakly correlated
209 L1MD3 2 n.s 99.0 Highly correlated
210 L1ME3E 2 n.s 99.0 Highly correlated
211 L1MEb 2 n.s 99.0 Highly correlated
212 L1MEg2 2 n.s 99.0 Highly correlated
213 L1PA12 2 n.s 74.0 Weakly correlated
214 L1PB2 2 n.s 74.0 Weakly correlated
215 L4_B_Mam 2 n.s 99.0 Highly correlated
216 LTR104_Mam 2 n.s 99.0 Highly correlated
217 LTR18C 2 **** 43.0 Weakly correlated
218 LTR27 2 ** 43.0 Weakly correlated
219 LTR40b 2 n.s 99.0 Highly correlated
220 LTR43 2 * 74.0 Weakly correlated
221 LTR45C 2 * 99.0 Highly correlated
222 LTR47A2 2 ** 74.0 Weakly correlated
223 LTR48 2 n.s 74.0 Weakly correlated
224 LTR50 2 n.s 99.0 Highly correlated
225 LTR52 2 n.s 99.0 Highly correlated
226 LTR55 2 * 99.0 Highly correlated
227 LTR79 2 n.s 99.0 Highly correlated
228 LTR83 2 * 99.0 Highly correlated
229 LTR84b 2 n.s 99.0 Highly correlated
230 MER41D 2 * 74.0 Weakly correlated
231 MER4A 2 n.s 74.0 Weakly correlated
232 MER50 2 n.s 43.0 Weakly correlated
233 MER50-int 2 n.s 43.0 Weakly correlated
234 MER52A 2 n.s 74.0 Weakly correlated
235 MER57A1 2 n.s 43.0 Weakly correlated
236 MER57C2 2 * 87.0 Weakly correlated
237 MER57F 2 * 74.0 Weakly correlated
238 MER61A 2 n.s 43.0 Weakly correlated
239 MER65-int 2 n.s 87.0 Weakly correlated
240 MER65C 2 * 74.0 Weakly correlated
241 MER66-int 2 n.s 43.0 Weakly correlated
242 MER67A 2 * 99.0 Highly correlated
243 MER72 2 n.s 43.0 Weakly correlated
244 MER90 2 n.s 99.0 Highly correlated
245 MLT1A1-int 2 n.s 87.0 Weakly correlated
246 MLT1D-int 2 n.s 99.0 Highly correlated
247 MLT1E1A 2 n.s 99.0 Highly correlated
248 MLT1E3 2 n.s 99.0 Highly correlated
249 MLT1G 2 n.s 99.0 Highly correlated
250 MLT1H2 2 n.s 99.0 Highly correlated
251 MLT2B2 2 n.s 99.0 Highly correlated
252 MLT2B3 2 n.s 99.0 Highly correlated
253 MLT2C1 2 n.s 99.0 Highly correlated
254 MLT2D 2 n.s 99.0 Highly correlated
255 MSTC 2 n.s 74.0 Weakly correlated
256 MSTD 2 n.s 74.0 Weakly correlated
257 MamGypLTR3 2 * 99.0 Highly correlated
258 MamRep1151 2 n.s 99.0 Highly correlated
259 MamRep605 2 n.s 99.0 Highly correlated
260 PrimLTR79 2 *** 74.0 Weakly correlated
261 THE1B-int 2 n.s 43.0 Weakly correlated
262 X7A_LINE 2 ** 319.0 Weakly correlated
263 AluYh9 1 ** 15.2 Weakly correlated
264 AluYi6 1 * 15.2 Weakly correlated
265 AluYk12 1 ** 15.2 Weakly correlated
266 AluYk2 1 n.s 19.6 Weakly correlated
267 AluYk3 1 n.s 19.6 Weakly correlated
268 ERV24_Prim-int 1 n.s 74.0 Weakly correlated
269 HAL1b 1 n.s 99.0 Highly correlated
270 HERV4_I-int 1 n.s 43.0 Weakly correlated
271 HERV9N-int 1 n.s 19.6 Weakly correlated
272 HERV9NC-int 1 n.s 19.6 Weakly correlated
273 HERVFH21-int 1 n.s 28.9 Weakly correlated
274 HERVH-int 1 n.s 28.9 Weakly correlated
275 HERVIP10B3-int 1 n.s 28.9 Weakly correlated
276 HERVK-int 1 n.s 28.9 Weakly correlated
277 HERVK22-int 1 n.s 43.0 Weakly correlated
278 HERVKC4-int 1 * 28.9 Weakly correlated
279 HERVL18-int 1 n.s 43.0 Weakly correlated
280 L1M3b 1 n.s 99.0 Highly correlated
281 L1M4a1 1 n.s 99.0 Highly correlated
282 L1MA1 1 n.s 74.0 Weakly correlated
283 L1MA3 1 n.s 74.0 Weakly correlated
284 L1MB1 1 n.s 99.0 Highly correlated
285 L1MDa 1 n.s 99.0 Highly correlated
286 L1ME3C 1 n.s 99.0 Highly correlated
287 L1PA14 1 n.s 74.0 Weakly correlated
288 L1PA6 1 n.s 28.9 Weakly correlated
289 L1PB3 1 n.s 74.0 Weakly correlated
290 L1PB4 1 n.s 99.0 Highly correlated
291 L1PBa 1 n.s 74.0 Weakly correlated
292 L2-3_Crp 1 n.s 431.0 Weakly correlated
293 LFSINE_Vert 1 n.s 319.0 Weakly correlated
294 LOR1b 1 n.s 74.0 Weakly correlated
295 LTR10B2 1 ** 28.9 Weakly correlated
296 LTR12E 1 n.s 19.6 Weakly correlated
297 LTR12F 1 n.s 28.9 Weakly correlated
298 LTR13_ 1 * 28.9 Weakly correlated
299 LTR16A2 1 n.s 99.0 Highly correlated
300 LTR16E2 1 n.s 99.0 Highly correlated
301 LTR18B 1 n.s 43.0 Weakly correlated
302 LTR19A 1 n.s 43.0 Weakly correlated
303 LTR1A2 1 n.s 43.0 Weakly correlated
304 LTR1C1 1 ** 43.0 Weakly correlated
305 LTR22C2 1 ** 28.9 Weakly correlated
306 LTR24B 1 n.s 74.0 Weakly correlated
307 LTR35A 1 ** 43.0 Weakly correlated
308 LTR37B 1 n.s 99.0 Highly correlated
309 LTR42 1 n.s 74.0 Weakly correlated
310 LTR5 1 *** 19.6 Weakly correlated
311 LTR56 1 n.s 74.0 Weakly correlated
312 LTR57 1 * 74.0 Weakly correlated
313 LTR62 1 n.s 74.0 Weakly correlated
314 LTR72 1 * 74.0 Weakly correlated
315 LTR76 1 n.s 74.0 Weakly correlated
316 LTR7C 1 n.s 28.9 Weakly correlated
317 LTR81A 1 n.s 99.0 Highly correlated
318 LTR81B 1 n.s 99.0 Highly correlated
319 LTR81C 1 n.s 99.0 Highly correlated
320 LTR84a 1 n.s 99.0 Highly correlated
321 LTR85c 1 n.s 99.0 Highly correlated
322 LTR86A2 1 * 99.0 Highly correlated
323 LTR88a 1 n.s 99.0 Highly correlated
324 LTR88b 1 n.s 99.0 Highly correlated
325 LTR9 1 n.s 43.0 Weakly correlated
326 LTR91 1 * 99.0 Highly correlated
327 MER101-int 1 n.s 74.0 Weakly correlated
328 MER110-int 1 n.s 99.0 Highly correlated
329 MER11B 1 n.s 19.6 Weakly correlated
330 MER11C 1 n.s 19.6 Weakly correlated
331 MER11D 1 n.s 19.6 Weakly correlated
332 MER31-int 1 n.s 99.0 Highly correlated
333 MER34 1 n.s 87.0 Weakly correlated
334 MER34A 1 n.s 99.0 Highly correlated
335 MER34A1 1 n.s 99.0 Highly correlated
336 MER34D 1 * 74.0 Weakly correlated
337 MER39 1 n.s 74.0 Weakly correlated
338 MER51B 1 n.s 43.0 Weakly correlated
339 MER51C 1 * 43.0 Weakly correlated
340 MER51E 1 * 43.0 Weakly correlated
341 MER52-int 1 n.s 99.0 Highly correlated
342 MER52C 1 n.s 74.0 Weakly correlated
343 MER52D 1 n.s 74.0 Weakly correlated
344 MER54A 1 n.s 87.0 Weakly correlated
345 MER57B2 1 n.s 43.0 Weakly correlated
346 MER57E1 1 n.s 87.0 Weakly correlated
347 MER61E 1 n.s 43.0 Weakly correlated
348 MER65A 1 n.s 74.0 Weakly correlated
349 MER65D 1 n.s 87.0 Weakly correlated
350 MER66B 1 n.s 43.0 Weakly correlated
351 MER67D 1 n.s 99.0 Highly correlated
352 MER70C 1 n.s 99.0 Highly correlated
353 MER74C 1 * 99.0 Highly correlated
354 MER83 1 n.s 43.0 Weakly correlated
355 MER83B-int 1 n.s 99.0 Highly correlated
356 MER90a 1 n.s 99.0 Highly correlated
357 MER9a3 1 n.s 28.9 Weakly correlated
358 MLT1A-int 1 n.s 99.0 Highly correlated
359 MLT1A0-int 1 n.s 99.0 Highly correlated
360 MLT1C-int 1 n.s 94.0 Weakly correlated
361 MLT1G1 1 n.s 99.0 Highly correlated
362 MLT1K-int 1 * 99.0 Highly correlated
363 MLT1L-int 1 ** 99.0 Highly correlated
364 MLT2B1 1 n.s 99.0 Highly correlated
365 MLT2B4 1 n.s 99.0 Highly correlated
366 MSTA1 1 n.s 74.0 Weakly correlated
367 MSTB-int 1 n.s 43.0 Weakly correlated
368 MSTB2 1 n.s 74.0 Weakly correlated
369 MamGypLTR1a 1 n.s 99.0 Highly correlated
370 MamGypLTR1b 1 n.s 99.0 Highly correlated
371 MamGypsy2-LTR 1 * 99.0 Highly correlated
372 PABL_A-int 1 n.s 74.0 Weakly correlated
373 SVA_C 1 n.s 15.2 Weakly correlated
374 THE1A 1 n.s 43.0 Weakly correlated
375 THE1A-int 1 n.s 43.0 Weakly correlated
376 THE1D-int 1 n.s 28.9 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluSx1 122 n.s 74.0 Weakly correlated
2 AluSx 109 n.s 74.0 Weakly correlated
3 AluJb 96 n.s 74.0 Weakly correlated
4 AluY 85 n.s 74.0 Weakly correlated
5 AluSz 76 n.s 74.0 Weakly correlated
6 L1MEd 52 **** 99.0 Highly correlated
7 AluJo 46 n.s 74.0 Weakly correlated
8 AluSp 46 n.s 74.0 Weakly correlated
9 AluJr 40 n.s 74.0 Weakly correlated
10 AluSx3 39 n.s 74.0 Weakly correlated
11 AluSq2 38 n.s 74.0 Weakly correlated
12 AluSg 34 n.s 74.0 Weakly correlated
13 L2a 34 n.s 99.0 Highly correlated
14 AluSz6 33 n.s 74.0 Weakly correlated
15 AluSc 31 n.s 74.0 Weakly correlated
16 MIRb 29 n.s 99.0 Highly correlated
17 MLT1A0 25 n.s 99.0 Highly correlated
18 AluSq 23 n.s 74.0 Weakly correlated
19 AluSc8 22 n.s 74.0 Weakly correlated
20 L2c 21 n.s 99.0 Highly correlated
21 MLT1A 19 ** 99.0 Highly correlated
22 MIR 18 n.s 99.0 Highly correlated
23 L1ME1 18 n.s 99.0 Highly correlated
24 L2 16 n.s 99.0 Highly correlated
25 L2b 16 n.s 99.0 Highly correlated
26 L1MC4 13 n.s 99.0 Highly correlated
27 L1PB1 12 n.s 74.0 Weakly correlated
28 L1M5 12 n.s 99.0 Highly correlated
29 L1MB7 10 n.s 99.0 Highly correlated
30 AluSx4 10 n.s 74.0 Weakly correlated
31 L1ME3A 10 n.s 99.0 Highly correlated
32 MLT1B 10 n.s 99.0 Highly correlated
33 AluSg4 10 n.s 74.0 Weakly correlated
34 L1MB5 9 n.s 99.0 Highly correlated
35 L1MA9 8 n.s 99.0 Highly correlated
36 L1M2 7 n.s 99.0 Highly correlated
37 L1ME4b 7 n.s 99.0 Highly correlated
38 AluSg7 7 n.s 74.0 Weakly correlated
39 L1MEi 7 n.s 99.0 Highly correlated
40 L1MEf 7 n.s 99.0 Highly correlated
41 MLT1A1 7 n.s 87.0 Weakly correlated
42 L1MB3 6 n.s 99.0 Highly correlated
43 MIR3 6 n.s 99.0 Highly correlated
44 L1ME4a 6 n.s 99.0 Highly correlated
45 L1M4b 6 n.s 99.0 Highly correlated
46 AluYm1 6 n.s 19.6 Weakly correlated
47 L1P4 6 n.s 74.0 Weakly correlated
48 L1PA15 6 n.s 74.0 Weakly correlated
49 L1PA5 6 n.s 19.6 Weakly correlated
50 MER4-int 6 n.s 74.0 Weakly correlated
51 MIRc 5 n.s 99.0 Highly correlated
52 FLAM_A 5 n.s 74.0 Weakly correlated
53 HAL1 5 n.s 99.0 Highly correlated
54 L1M4 5 n.s 99.0 Highly correlated
55 L1MA8 5 n.s 87.0 Weakly correlated
56 AluJr4 5 n.s 74.0 Weakly correlated
57 FLAM_C 5 n.s 74.0 Weakly correlated
58 L1M1 5 n.s 74.0 Weakly correlated
59 L1MEc 5 n.s 99.0 Highly correlated
60 L1PA7 5 n.s 74.0 Weakly correlated
61 L1MB8 5 n.s 99.0 Highly correlated
62 L1PA13 4 n.s 74.0 Weakly correlated
63 L1MC5 4 n.s 99.0 Highly correlated
64 L1MC5a 4 n.s 99.0 Highly correlated
65 L1ME3G 4 n.s 99.0 Highly correlated
66 L1ME3Cz 4 n.s 99.0 Highly correlated
67 L1PA8 4 n.s 74.0 Weakly correlated
68 AluSc5 4 n.s 74.0 Weakly correlated
69 L1MD2 4 n.s 99.0 Highly correlated
70 SVA_D 4 n.s 15.2 Weakly correlated
71 L1PA2 4 n.s 15.2 Weakly correlated
72 L3 4 n.s 99.0 Highly correlated
73 FRAM 4 n.s 74.0 Weakly correlated
74 L1MA4 4 n.s 87.0 Weakly correlated
75 L1MB4 3 n.s 99.0 Highly correlated
76 L1MCa 3 n.s 99.0 Highly correlated
77 L1MCc 3 n.s 99.0 Highly correlated
78 AluYj4 3 n.s 0.0 Weakly correlated
79 Alu 3 * 74.0 Weakly correlated
80 L1MC2 3 n.s 99.0 Highly correlated
81 L1ME2z 3 n.s 99.0 Highly correlated
82 L1ME3B 3 n.s 99.0 Highly correlated
83 LTR37-int 3 n.s 99.0 Highly correlated
84 MSTB 3 n.s 43.0 Weakly correlated
85 L1PA4 3 n.s 19.6 Weakly correlated
86 AluYc 3 n.s 74.0 Weakly correlated
87 L1P1 3 n.s 19.6 Weakly correlated
88 L1PA3 3 n.s 19.6 Weakly correlated
89 LTR33A 3 n.s 99.0 Highly correlated
90 MLT1J 3 n.s 99.0 Highly correlated
91 L1ME2 3 n.s 99.0 Highly correlated
92 L1ME3 3 n.s 99.0 Highly correlated
93 L4_A_Mam 3 n.s 99.0 Highly correlated
94 AluSq4 3 n.s 74.0 Weakly correlated
95 LTR8B 3 n.s 43.0 Weakly correlated
96 AluSq10 2 n.s 74.0 Weakly correlated
97 L1M4c 2 n.s 99.0 Highly correlated
98 L1MC1 2 n.s 99.0 Highly correlated
99 LOR1-int 2 n.s 74.0 Weakly correlated
100 MLT1F 2 n.s 99.0 Highly correlated
101 MamRTE1 2 n.s 99.0 Highly correlated
102 L1M6 2 n.s 99.0 Highly correlated
103 L1MA4A 2 n.s 87.0 Weakly correlated
104 L1MC4a 2 n.s 99.0 Highly correlated
105 L1P4a 2 n.s 74.0 Weakly correlated
106 AluYh3 2 n.s 15.2 Weakly correlated
107 MER4B-int 2 n.s 99.0 Highly correlated
108 AluYa5 2 n.s 15.2 Weakly correlated
109 L1MC3 2 n.s 99.0 Highly correlated
110 L1ME5 2 n.s 99.0 Highly correlated
111 L1MEb 2 n.s 99.0 Highly correlated
112 L1PA11 2 n.s 74.0 Weakly correlated
113 AluYf1 2 n.s 19.6 Weakly correlated
114 L1ME3D 2 n.s 99.0 Highly correlated
115 L1PREC2 2 n.s 43.0 Weakly correlated
116 L3b 2 n.s 99.0 Highly correlated
117 AluYe5 2 n.s 74.0 Weakly correlated
118 L1M7 2 n.s 99.0 Highly correlated
119 L1MD 2 n.s 99.0 Highly correlated
120 L1ME3E 2 n.s 99.0 Highly correlated
121 L1MEg 2 n.s 99.0 Highly correlated
122 L1MD1 2 n.s 99.0 Highly correlated
123 SVA_A 2 n.s 19.6 Weakly correlated
124 ERVL-B4-int 1 n.s 99.0 Highly correlated
125 L1M3c 1 n.s 99.0 Highly correlated
126 L1MA5A 1 n.s 87.0 Weakly correlated
127 L1MB1 1 n.s 99.0 Highly correlated
128 L1P2 1 n.s 28.9 Weakly correlated
129 LTR5 1 *** 19.6 Weakly correlated
130 LTR50 1 n.s 99.0 Highly correlated
131 LTR57 1 * 74.0 Weakly correlated
132 MER49 1 n.s 43.0 Weakly correlated
133 MER57B2 1 n.s 43.0 Weakly correlated
134 MER57F 1 n.s 74.0 Weakly correlated
135 MER68B 1 n.s 99.0 Highly correlated
136 MLT1A-int 1 n.s 99.0 Highly correlated
137 MLT1E2 1 n.s 99.0 Highly correlated
138 MLT1E3 1 n.s 99.0 Highly correlated
139 L1M3 1 n.s 99.0 Highly correlated
140 L1MDb 1 n.s 99.0 Highly correlated
141 L1PA14 1 n.s 74.0 Weakly correlated
142 LTR33 1 n.s 99.0 Highly correlated
143 LTR79 1 n.s 99.0 Highly correlated
144 MER65-int 1 n.s 87.0 Weakly correlated
145 MER65C 1 n.s 74.0 Weakly correlated
146 MER83B-int 1 n.s 99.0 Highly correlated
147 MSTA 1 n.s 43.0 Weakly correlated
148 ERV3-16A3_I-int 1 n.s 99.0 Highly correlated
149 HAL1ME 1 n.s 99.0 Highly correlated
150 HERV9N-int 1 n.s 19.6 Weakly correlated
151 LTR13 1 n.s 19.6 Weakly correlated
152 MER110-int 1 n.s 99.0 Highly correlated
153 MER41B 1 n.s 74.0 Weakly correlated
154 MER89 1 n.s 99.0 Highly correlated
155 MLT1H 1 n.s 99.0 Highly correlated
156 MLT1K 1 n.s 99.0 Highly correlated
157 HERVFH21-int 1 n.s 28.9 Weakly correlated
158 LOR1b 1 n.s 74.0 Weakly correlated
159 LTR13_ 1 * 28.9 Weakly correlated
160 LTR41C 1 n.s 99.0 Highly correlated
161 LTR43 1 n.s 74.0 Weakly correlated
162 LTR81A 1 n.s 99.0 Highly correlated
163 LTR81B 1 n.s 99.0 Highly correlated
164 MER11C 1 n.s 19.6 Weakly correlated
165 MER11D 1 n.s 19.6 Weakly correlated
166 MamGypsy2-LTR 1 * 99.0 Highly correlated
167 Plat_L3 1 n.s 99.0 Highly correlated
168 THE1B-int 1 n.s 43.0 Weakly correlated
169 L1M3f 1 n.s 87.0 Weakly correlated
170 L1PA17 1 n.s 74.0 Weakly correlated
171 L1PB2 1 n.s 74.0 Weakly correlated
172 MER4D 1 n.s 74.0 Weakly correlated
173 MER66-int 1 n.s 43.0 Weakly correlated
174 AluYb8 1 n.s 15.2 Weakly correlated
175 HERVL40-int 1 n.s 99.0 Highly correlated
176 L1MA1 1 n.s 74.0 Weakly correlated
177 L1MA3 1 n.s 74.0 Weakly correlated
178 L1PA16 1 n.s 74.0 Weakly correlated
179 LTR4 1 * 28.9 Weakly correlated
180 LTR42 1 n.s 74.0 Weakly correlated
181 LTR52 1 n.s 99.0 Highly correlated
182 LTR88a 1 n.s 99.0 Highly correlated
183 MER31-int 1 n.s 99.0 Highly correlated
184 MER34D 1 * 74.0 Weakly correlated
185 MER51-int 1 n.s 43.0 Weakly correlated
186 MER51C 1 * 43.0 Weakly correlated
187 MER57E1 1 n.s 87.0 Weakly correlated
188 MER61E 1 n.s 43.0 Weakly correlated
189 MER68 1 n.s 99.0 Highly correlated
190 MLT1A1-int 1 n.s 87.0 Weakly correlated
191 MLT1E1A 1 n.s 99.0 Highly correlated
192 MLT1F1 1 n.s 99.0 Highly correlated
193 MLT1I 1 n.s 99.0 Highly correlated
194 PRIMA4-int 1 n.s 74.0 Weakly correlated
195 AluYk12 1 ** 15.2 Weakly correlated
196 AluYk2 1 n.s 19.6 Weakly correlated
197 ERVL-E-int 1 n.s 99.0 Highly correlated
198 HAL1b 1 n.s 99.0 Highly correlated
199 HERVIP10FH-int 1 n.s 28.9 Weakly correlated
200 L1MA2 1 n.s 74.0 Weakly correlated
201 L1ME3F 1 n.s 99.0 Highly correlated
202 L1PB3 1 n.s 74.0 Weakly correlated
203 LTR19A 1 n.s 43.0 Weakly correlated
204 LTR22A 1 * 43.0 Weakly correlated
205 LTR81C 1 n.s 99.0 Highly correlated
206 MER4A 1 n.s 74.0 Weakly correlated
207 MLT1C 1 n.s 94.0 Weakly correlated
208 MLT1F2 1 n.s 99.0 Highly correlated
209 MLT1L-int 1 ** 99.0 Highly correlated
210 HERV4_I-int 1 n.s 43.0 Weakly correlated
211 HERVH-int 1 n.s 28.9 Weakly correlated
212 HERVL74-int 1 n.s 99.0 Highly correlated
213 L1MB2 1 n.s 99.0 Highly correlated
214 L4_C_Mam 1 n.s 99.0 Highly correlated
215 LTR16C 1 n.s 99.0 Highly correlated
216 LTR24B 1 n.s 74.0 Weakly correlated
217 LTR71B 1 n.s 43.0 Weakly correlated
218 LTR7C 1 n.s 28.9 Weakly correlated
219 LTR91 1 * 99.0 Highly correlated
220 MER101-int 1 n.s 74.0 Weakly correlated
221 MER31A 1 n.s 87.0 Weakly correlated
222 MER34A 1 n.s 99.0 Highly correlated
223 MER74A 1 n.s 99.0 Highly correlated
224 MamRep605 1 n.s 99.0 Highly correlated
225 THE1D 1 n.s 43.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 L1ME4A 99.0 Highly correlated
2 L2A 99.0 Highly correlated