ZRdb KZFP & Repeats
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Human_ZNF705D

  • Protein
    Zinc finger protein 705D
  • Length
    300
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    28.9 Mya
  • Time of Changing in binding specificity
    28.9 Mya
  • Uniprot_ID
    P0CH99
  • NCBI_ID
    728957
Sequence:
MHSLEKVTFEDVAIDFTQEEWDMMDTSKRKLYRDVMLENISHLVSLGYQISKSYIILQLEQGKELWREGRVFLQDQNPDRESALKKKHMISMHPIIRKDASTSMTMENSLILEDPFEYNDSGEDCTHSSTITQCLLTHSGKKPCVSKQCGKSLRNLLSPKPRKQIHTKGKSYQCNLCEKAYTNCFYLRRHKMTHTGERPYACHLCGKAFTQCSHLRRHEKTHTGERPYKCHQCGKAFIQSFNLRRHERTHLGQKCYECDKSGKAFSQSSGFRGNKIIHIGEKPHACLLCGKAFSLSSDLR
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 7..78
2 C2h2 172..194
3 C2h2 200..222
4 C2h2 228..250
5 dec2h2 256..278
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific
4 Molecular Function metal ion binding
5 Molecular Function RNA polymerase II transcription regulatory region sequence-specific DNA binding
6 Biological Process negative regulation of transcription by RNA polymerase II
7 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 SVA_D 943 **** 15.2 Weakly correlated
2 L2a 633 **** 99.0 Weakly correlated
3 AluJb 602 **** 74.0 Weakly correlated
4 SVA_F 495 **** 0.0 Weakly correlated
5 LTR12C 470 **** 19.6 Weakly correlated
6 AluJr 375 **** 74.0 Weakly correlated
7 L2c 353 **** 99.0 Weakly correlated
8 AluSx 347 ** 74.0 Weakly correlated
9 MIRb 343 ** 99.0 Weakly correlated
10 L2b 329 **** 99.0 Weakly correlated
11 AluJo 325 **** 74.0 Weakly correlated
12 AluSz 311 ** 74.0 Weakly correlated
13 AluSx1 309 n.s 74.0 Weakly correlated
14 L1PA13 292 **** 74.0 Weakly correlated
15 MIR 211 n.s 99.0 Weakly correlated
16 L1PA14 208 **** 74.0 Weakly correlated
17 SVA_C 196 **** 15.2 Weakly correlated
18 L2 195 **** 99.0 Weakly correlated
19 HERVH-int 191 **** 28.9 Highly correlated
20 SVA_E 183 **** 0.0 Weakly correlated
21 L1PREC2 179 **** 43.0 Moderately correlated
22 SVA_B 176 **** 15.2 Weakly correlated
23 AluSz6 168 **** 74.0 Weakly correlated
24 MIR3 167 **** 99.0 Weakly correlated
25 AluSq2 161 n.s 74.0 Weakly correlated
26 AluY 160 n.s 74.0 Weakly correlated
27 THE1D 156 **** 43.0 Moderately correlated
28 MIRc 146 ** 99.0 Weakly correlated
29 AluSp 141 n.s 74.0 Weakly correlated
30 L1MC4 140 **** 99.0 Weakly correlated
31 MSTA 139 **** 43.0 Moderately correlated
32 MLT1A 124 **** 99.0 Weakly correlated
33 L1M5 122 n.s 99.0 Weakly correlated
34 L1PA15 109 **** 74.0 Weakly correlated
35 L1PA16 106 n.s 74.0 Weakly correlated
36 MLT1B 106 **** 99.0 Weakly correlated
37 FLAM_C 100 **** 74.0 Weakly correlated
38 L1ME1 100 n.s 99.0 Weakly correlated
39 SVA_A 96 **** 19.6 Weakly correlated
40 MLT1D 93 *** 99.0 Weakly correlated
41 MSTD 83 **** 74.0 Weakly correlated
42 AluJr4 81 **** 74.0 Weakly correlated
43 L3 80 n.s 99.0 Weakly correlated
44 AluSx3 78 n.s 74.0 Weakly correlated
45 L1M1 78 n.s 74.0 Weakly correlated
46 AluSc 77 n.s 74.0 Weakly correlated
47 HAL1 77 n.s 99.0 Weakly correlated
48 AluSg 75 n.s 74.0 Weakly correlated
49 MLT1K 73 **** 99.0 Weakly correlated
50 MSTB 73 **** 43.0 Moderately correlated
51 L1MEd 67 n.s 99.0 Weakly correlated
52 L1M4 66 n.s 99.0 Weakly correlated
53 L1PA17 66 **** 74.0 Weakly correlated
54 L1MEc 65 n.s 99.0 Weakly correlated
55 L1ME4a 64 n.s 99.0 Weakly correlated
56 AluSq 62 * 74.0 Weakly correlated
57 L1PA11 59 *** 74.0 Weakly correlated
58 L1MA3 58 n.s 74.0 Weakly correlated
59 L1MB7 58 n.s 99.0 Weakly correlated
60 L1MEg 58 n.s 99.0 Weakly correlated
61 L1MC1 57 n.s 99.0 Weakly correlated
62 AluSc8 56 n.s 74.0 Weakly correlated
63 FLAM_A 55 **** 74.0 Weakly correlated
64 LTR33 54 **** 99.0 Weakly correlated
65 L1MC5a 52 n.s 99.0 Weakly correlated
66 MSTB1 50 **** 74.0 Weakly correlated
67 L1MA9 49 n.s 99.0 Weakly correlated
68 MLT1C 49 n.s 94.0 Weakly correlated
69 L1PA8 47 n.s 74.0 Weakly correlated
70 L1ME3A 46 n.s 99.0 Weakly correlated
71 L1PA10 46 n.s 74.0 Weakly correlated
72 L1MEf 43 n.s 99.0 Weakly correlated
73 L1MC5 42 n.s 99.0 Weakly correlated
74 MLT1J 42 * 99.0 Weakly correlated
75 MLT1A0 41 n.s 99.0 Weakly correlated
76 L1PA12 40 **** 74.0 Weakly correlated
77 L1ME4b 39 n.s 99.0 Weakly correlated
78 LTR12D 39 **** 19.6 Weakly correlated
79 L1MC2 38 n.s 99.0 Weakly correlated
80 THE1B 38 n.s 43.0 Moderately correlated
81 L1MA4 37 n.s 87.0 Weakly correlated
82 L1MB5 37 n.s 99.0 Weakly correlated
83 L1MC3 36 n.s 99.0 Weakly correlated
84 L1MD2 36 n.s 99.0 Weakly correlated
85 L1M2 35 n.s 99.0 Weakly correlated
86 L1PB1 35 n.s 74.0 Weakly correlated
87 L1MC4a 34 n.s 99.0 Weakly correlated
88 LTR12E 34 **** 19.6 Weakly correlated
89 HAL1b 33 **** 99.0 Weakly correlated
90 L1MD1 33 n.s 99.0 Weakly correlated
91 FRAM 32 **** 74.0 Weakly correlated
92 L1MB8 32 n.s 99.0 Weakly correlated
93 L1PA5 32 n.s 19.6 Weakly correlated
94 L1ME2 31 n.s 99.0 Weakly correlated
95 L1PB3 31 n.s 74.0 Weakly correlated
96 MLT1O 31 **** 99.0 Weakly correlated
97 L1MB3 30 n.s 99.0 Weakly correlated
98 L1MB4 30 n.s 99.0 Weakly correlated
99 L1PB4 30 n.s 99.0 Weakly correlated
100 LTR16B2 30 **** 99.0 Weakly correlated
101 L1MCa 29 n.s 99.0 Weakly correlated
102 L1MD 29 n.s 99.0 Weakly correlated
103 L1ME3Cz 29 n.s 99.0 Weakly correlated
104 L1PA4 29 n.s 19.6 Weakly correlated
105 HAL1ME 28 * 99.0 Weakly correlated
106 MLT2D 26 **** 99.0 Weakly correlated
107 L1M3 25 n.s 99.0 Weakly correlated
108 L1MA4A 25 n.s 87.0 Weakly correlated
109 L1ME3 24 n.s 99.0 Weakly correlated
110 L1PA7 24 n.s 74.0 Weakly correlated
111 MLT1F1 24 **** 99.0 Weakly correlated
112 MLT1H 24 n.s 99.0 Weakly correlated
113 L1ME3G 23 n.s 99.0 Weakly correlated
114 AluSg7 22 n.s 74.0 Weakly correlated
115 L1MB2 22 n.s 99.0 Weakly correlated
116 L1MD3 22 n.s 99.0 Weakly correlated
117 L1ME2z 22 n.s 99.0 Weakly correlated
118 MLT1F2 22 n.s 99.0 Weakly correlated
119 MLT1L 22 n.s 99.0 Weakly correlated
120 L1M4b 21 n.s 99.0 Weakly correlated
121 L1M4c 21 n.s 99.0 Weakly correlated
122 L1PA3 21 n.s 19.6 Weakly correlated
123 MIR1_Amn 21 ** 319.0 Weakly correlated
124 MLT1A1 21 n.s 87.0 Weakly correlated
125 MLT1J2 21 * 99.0 Weakly correlated
126 L1M7 19 ** 99.0 Weakly correlated
127 L1MA8 19 n.s 87.0 Weakly correlated
128 L1MDa 19 n.s 99.0 Weakly correlated
129 L1ME3B 19 n.s 99.0 Weakly correlated
130 MLT2B4 19 * 99.0 Weakly correlated
131 AluSg4 18 n.s 74.0 Weakly correlated
132 AluSx4 18 n.s 74.0 Weakly correlated
133 L4_A_Mam 18 n.s 99.0 Weakly correlated
134 MLT1F 18 n.s 99.0 Weakly correlated
135 MLT2B3 18 * 99.0 Weakly correlated
136 AluSc5 17 n.s 74.0 Weakly correlated
137 L1MA2 17 n.s 74.0 Weakly correlated
138 L1MC 17 n.s 99.0 Weakly correlated
139 L1MEi 17 n.s 99.0 Weakly correlated
140 L1PA6 17 n.s 28.9 Highly correlated
141 THE1C 17 n.s 43.0 Moderately correlated
142 L1MB1 16 n.s 99.0 Weakly correlated
143 LTR16E2 16 **** 99.0 Weakly correlated
144 LTR78 16 n.s 99.0 Weakly correlated
145 MER21C 16 n.s 99.0 Weakly correlated
146 MLT2B2 16 *** 99.0 Weakly correlated
147 L1MA6 15 n.s 87.0 Weakly correlated
148 L3b 15 n.s 99.0 Weakly correlated
149 L1MA1 14 n.s 74.0 Weakly correlated
150 L1MA10 14 n.s 99.0 Weakly correlated
151 L1PA2 14 n.s 15.2 Weakly correlated
152 MER52A 14 n.s 74.0 Weakly correlated
153 MLT1N2 14 * 99.0 Weakly correlated
154 MLT2B1 14 n.s 99.0 Weakly correlated
155 Alu 13 **** 74.0 Weakly correlated
156 AluYm1 13 n.s 19.6 Weakly correlated
157 FAM 13 ** 87.0 Weakly correlated
158 L1M6 13 n.s 99.0 Weakly correlated
159 L1MCb 13 n.s 99.0 Weakly correlated
160 LTR16 13 * 99.0 Weakly correlated
161 LTR16A 13 n.s 99.0 Weakly correlated
162 LTR16D 13 **** 99.0 Weakly correlated
163 LTR78B 13 ** 99.0 Weakly correlated
164 MLT1G 13 * 99.0 Weakly correlated
165 MLT1G1 13 n.s 99.0 Weakly correlated
166 MLT1G3 13 * 99.0 Weakly correlated
167 LTR52 12 **** 99.0 Weakly correlated
168 MamRTE1 12 n.s 99.0 Weakly correlated
169 THE1A 12 n.s 43.0 Moderately correlated
170 L1M4a1 11 n.s 99.0 Weakly correlated
171 L1MA5 11 n.s 87.0 Weakly correlated
172 L1MA5A 11 n.s 87.0 Weakly correlated
173 L1MA7 11 n.s 87.0 Weakly correlated
174 L1ME3F 11 n.s 99.0 Weakly correlated
175 L1P2 11 n.s 28.9 Highly correlated
176 L1PB2 11 n.s 74.0 Weakly correlated
177 MLT1H2 11 n.s 99.0 Weakly correlated
178 MLT1I 11 n.s 99.0 Weakly correlated
179 MLT1J1 11 n.s 99.0 Weakly correlated
180 MLT1M 11 *** 99.0 Weakly correlated
181 THE1B-int 11 n.s 43.0 Moderately correlated
182 AluYc 10 n.s 74.0 Weakly correlated
183 L1ME4c 10 n.s 99.0 Weakly correlated
184 L1MEh 10 n.s 99.0 Weakly correlated
185 L1P1 10 n.s 19.6 Weakly correlated
186 L1P4 10 n.s 74.0 Weakly correlated
187 LTR30 10 **** 28.9 Highly correlated
188 MER39 10 n.s 74.0 Weakly correlated
189 MER4CL34 10 *** 43.0 Moderately correlated
190 MER54A 10 *** 87.0 Weakly correlated
191 L1MCc 9 n.s 99.0 Weakly correlated
192 L1ME3D 9 n.s 99.0 Weakly correlated
193 L1PA15-16 9 n.s 74.0 Weakly correlated
194 L1PB 9 n.s 74.0 Weakly correlated
195 LTR16A1 9 n.s 99.0 Weakly correlated
196 LTR16C 9 n.s 99.0 Weakly correlated
197 LTR33A 9 * 99.0 Weakly correlated
198 LTR33A_ 9 * 99.0 Weakly correlated
199 LTR79 9 n.s 99.0 Weakly correlated
200 LTR84b 9 *** 99.0 Weakly correlated
201 LTR85b 9 **** 99.0 Weakly correlated
202 MER4-int 9 n.s 74.0 Weakly correlated
203 MLT1E2 9 n.s 99.0 Weakly correlated
204 MLT2C1 9 n.s 99.0 Weakly correlated
205 ERVL-E-int 8 n.s 99.0 Weakly correlated
206 HERVFH21-int 8 **** 28.9 Highly correlated
207 L1ME5 8 n.s 99.0 Weakly correlated
208 L1P3 8 n.s 74.0 Weakly correlated
209 MER21B 8 n.s 99.0 Weakly correlated
210 MER41B 8 n.s 74.0 Weakly correlated
211 MLT1E1A 8 n.s 99.0 Weakly correlated
212 MLT2C2 8 ** 99.0 Weakly correlated
213 AluYj4 7 n.s 0.0 Weakly correlated
214 HERVL40-int 7 n.s 99.0 Weakly correlated
215 L1MEj 7 n.s 99.0 Weakly correlated
216 L2-3_Crp 7 * 431.0 Weakly correlated
217 LTR13 7 * 19.6 Weakly correlated
218 LTR16B1 7 * 99.0 Weakly correlated
219 LTR19B 7 **** 43.0 Moderately correlated
220 LTR50 7 n.s 99.0 Weakly correlated
221 LTR8 7 n.s 43.0 Moderately correlated
222 LTR81C 7 **** 99.0 Weakly correlated
223 MER49 7 n.s 43.0 Moderately correlated
224 MER4B 7 n.s 74.0 Weakly correlated
225 MER4E1 7 n.s 74.0 Weakly correlated
226 MER73 7 **** 87.0 Weakly correlated
227 MLT1E3 7 n.s 99.0 Weakly correlated
228 Plat_L3 7 n.s 99.0 Weakly correlated
229 THE1A-int 7 n.s 43.0 Moderately correlated
230 THE1D-int 7 n.s 28.9 Highly correlated
231 ERV3-16A3_I-int 6 n.s 99.0 Weakly correlated
232 L1M4a2 6 n.s 99.0 Weakly correlated
233 L1ME3C 6 n.s 99.0 Weakly correlated
234 L1PA8A 6 n.s 74.0 Weakly correlated
235 L1PBa 6 n.s 74.0 Weakly correlated
236 L4_C_Mam 6 n.s 99.0 Weakly correlated
237 LTR28B 6 ** 43.0 Moderately correlated
238 LTR37B 6 n.s 99.0 Weakly correlated
239 LTR40a 6 n.s 99.0 Weakly correlated
240 LTR67B 6 n.s 99.0 Weakly correlated
241 LTR7 6 n.s 19.6 Weakly correlated
242 LTR81A 6 ** 99.0 Weakly correlated
243 LTR9D 6 * 43.0 Moderately correlated
244 MER31B 6 n.s 99.0 Weakly correlated
245 MER39B 6 n.s 74.0 Weakly correlated
246 MER4A1 6 n.s 74.0 Weakly correlated
247 MER50 6 n.s 43.0 Moderately correlated
248 MER52-int 6 n.s 99.0 Weakly correlated
249 MER61-int 6 n.s 43.0 Moderately correlated
250 MER74A 6 n.s 99.0 Weakly correlated
251 MSTC 6 n.s 74.0 Weakly correlated
252 MamGypLTR1a 6 ** 99.0 Weakly correlated
253 MamGypLTR1d 6 *** 99.0 Weakly correlated
254 AluSq10 5 n.s 74.0 Weakly correlated
255 AluYh3 5 n.s 15.2 Weakly correlated
256 CR1-3_Croc 5 ** 319.0 Weakly correlated
257 HAL1M8 5 n.s 99.0 Weakly correlated
258 HERV17-int 5 n.s 28.9 Highly correlated
259 L1HS 5 n.s 8.6 Weakly correlated
260 LTR10A 5 ** 28.9 Highly correlated
261 LTR16E1 5 n.s 99.0 Weakly correlated
262 LTR49 5 n.s 74.0 Weakly correlated
263 LTR81B 5 * 99.0 Weakly correlated
264 LTR85a 5 n.s 99.0 Weakly correlated
265 LTR89 5 * 99.0 Weakly correlated
266 LTR8A 5 n.s 43.0 Moderately correlated
267 MER4A 5 n.s 74.0 Weakly correlated
268 MER61A 5 * 43.0 Moderately correlated
269 MER66C 5 ** 43.0 Moderately correlated
270 MLT1H1 5 n.s 99.0 Weakly correlated
271 MLT1J-int 5 n.s 99.0 Weakly correlated
272 MLT2A1 5 n.s 74.0 Weakly correlated
273 MLT2A2 5 n.s 74.0 Weakly correlated
274 MLT2F 5 n.s 99.0 Weakly correlated
275 MSTA1 5 ** 74.0 Weakly correlated
276 MamRep1527 5 n.s 99.0 Weakly correlated
277 MamRep605 5 n.s 99.0 Weakly correlated
278 MamSINE1 5 n.s 99.0 Weakly correlated
279 AluYa5 4 n.s 15.2 Weakly correlated
280 AluYg6 4 * 15.2 Weakly correlated
281 HERV9N-int 4 n.s 19.6 Weakly correlated
282 HERVIP10FH-int 4 n.s 28.9 Highly correlated
283 HERVP71A-int 4 n.s 43.0 Moderately correlated
284 HUERS-P3-int 4 n.s 43.0 Moderately correlated
285 L1M3b 4 n.s 99.0 Weakly correlated
286 L1M3d 4 n.s 99.0 Weakly correlated
287 L1M3f 4 n.s 87.0 Weakly correlated
288 L1M8 4 n.s 99.0 Weakly correlated
289 L1MDb 4 n.s 99.0 Weakly correlated
290 L1ME3E 4 n.s 99.0 Weakly correlated
291 L1MEb 4 n.s 99.0 Weakly correlated
292 L1P4a 4 n.s 74.0 Weakly correlated
293 L1P4b 4 * 74.0 Weakly correlated
294 L4_B_Mam 4 n.s 99.0 Weakly correlated
295 LTR101_Mam 4 n.s 99.0 Weakly correlated
296 LTR102_Mam 4 * 99.0 Weakly correlated
297 LTR103_Mam 4 ** 99.0 Weakly correlated
298 LTR19-int 4 * 43.0 Moderately correlated
299 LTR1A2 4 n.s 43.0 Moderately correlated
300 LTR40A1 4 ** 99.0 Weakly correlated
301 LTR48 4 n.s 74.0 Weakly correlated
302 LTR49-int 4 n.s 74.0 Weakly correlated
303 LTR84a 4 * 99.0 Weakly correlated
304 LTR88b 4 n.s 99.0 Weakly correlated
305 LTR9 4 n.s 43.0 Moderately correlated
306 LTR9B 4 n.s 43.0 Moderately correlated
307 MER21-int 4 n.s 99.0 Weakly correlated
308 MER21A 4 n.s 74.0 Weakly correlated
309 MER31A 4 n.s 87.0 Weakly correlated
310 MER34 4 n.s 87.0 Weakly correlated
311 MER34A 4 n.s 99.0 Weakly correlated
312 MER34B 4 * 87.0 Weakly correlated
313 MER41-int 4 n.s 74.0 Weakly correlated
314 MER4C 4 n.s 74.0 Weakly correlated
315 MER4D1 4 n.s 74.0 Weakly correlated
316 MER72 4 n.s 43.0 Moderately correlated
317 MLT1J1-int 4 * 99.0 Weakly correlated
318 MamGypLTR1b 4 n.s 99.0 Weakly correlated
319 MamGypLTR1c 4 n.s 99.0 Weakly correlated
320 MamGypLTR3a 4 n.s 99.0 Weakly correlated
321 X7B_LINE 4 ** 319.0 Weakly correlated
322 AluYb8 3 n.s 15.2 Weakly correlated
323 AluYf1 3 n.s 19.6 Weakly correlated
324 AluYk3 3 n.s 19.6 Weakly correlated
325 ERVL-B4-int 3 n.s 99.0 Weakly correlated
326 HERV16-int 3 n.s 99.0 Weakly correlated
327 HERV35I-int 3 n.s 43.0 Moderately correlated
328 HERVIP10B3-int 3 n.s 28.9 Highly correlated
329 HERVK9-int 3 n.s 28.9 Highly correlated
330 L1M2a1 3 * 79.0 Weakly correlated
331 L1M3a 3 n.s 99.0 Weakly correlated
332 LFSINE_Vert 3 n.s 319.0 Weakly correlated
333 LTR104_Mam 3 n.s 99.0 Weakly correlated
334 LTR10D 3 ** 28.9 Highly correlated
335 LTR10F 3 n.s 28.9 Highly correlated
336 LTR16A2 3 n.s 99.0 Weakly correlated
337 LTR17 3 n.s 28.9 Highly correlated
338 LTR1D 3 n.s 43.0 Moderately correlated
339 LTR2 3 n.s 28.9 Highly correlated
340 LTR25-int 3 n.s 43.0 Moderately correlated
341 LTR26 3 n.s 74.0 Weakly correlated
342 LTR28C 3 n.s 43.0 Moderately correlated
343 LTR41 3 n.s 99.0 Weakly correlated
344 LTR41B 3 n.s 99.0 Weakly correlated
345 LTR41C 3 n.s 99.0 Weakly correlated
346 LTR48B 3 n.s 74.0 Weakly correlated
347 LTR54 3 n.s 74.0 Weakly correlated
348 LTR7Y 3 ** 8.6 Weakly correlated
349 LTR85c 3 n.s 99.0 Weakly correlated
350 LTR88a 3 * 99.0 Weakly correlated
351 LTR9A1 3 n.s 43.0 Moderately correlated
352 MER101 3 * 74.0 Weakly correlated
353 MER101-int 3 n.s 74.0 Weakly correlated
354 MER101B 3 ** 87.0 Weakly correlated
355 MER11A 3 n.s 28.9 Highly correlated
356 MER34A1 3 n.s 99.0 Weakly correlated
357 MER4B-int 3 n.s 99.0 Weakly correlated
358 MER4E 3 n.s 74.0 Weakly correlated
359 MER51A 3 n.s 43.0 Moderately correlated
360 MER52C 3 n.s 74.0 Weakly correlated
361 MER52D 3 n.s 74.0 Weakly correlated
362 MER54B 3 n.s 87.0 Weakly correlated
363 MER67B 3 n.s 99.0 Weakly correlated
364 MER67D 3 n.s 99.0 Weakly correlated
365 MER68 3 n.s 99.0 Weakly correlated
366 MER68B 3 * 99.0 Weakly correlated
367 MER74B 3 n.s 99.0 Weakly correlated
368 MER77B 3 n.s 99.0 Weakly correlated
369 MLT1A0-int 3 n.s 99.0 Weakly correlated
370 MLT1E1 3 n.s 99.0 Weakly correlated
371 MSTB2 3 n.s 74.0 Weakly correlated
372 MamGypLTR2c 3 n.s 99.0 Weakly correlated
373 MamGypLTR3 3 * 99.0 Weakly correlated
374 MamGypsy2-I 3 n.s 99.0 Weakly correlated
375 THE1C-int 3 n.s 43.0 Moderately correlated
376 X6A_LINE 3 * 99.0 Weakly correlated
377 AluSq4 2 n.s 74.0 Weakly correlated
378 AluYc3 2 n.s 74.0 Weakly correlated
379 AluYe5 2 n.s 74.0 Weakly correlated
380 AluYk2 2 n.s 19.6 Weakly correlated
381 AmnSINE1 2 n.s 319.0 Weakly correlated
382 ERV24_Prim-int 2 n.s 74.0 Weakly correlated
383 ERV3-16A3_LTR 2 n.s 99.0 Weakly correlated
384 ERVL-int 2 n.s 99.0 Weakly correlated
385 HERVFH19-int 2 n.s 43.0 Moderately correlated
386 HERVI-int 2 n.s 28.9 Highly correlated
387 HERVL18-int 2 n.s 43.0 Moderately correlated
388 HERVS71-int 2 n.s 28.9 Highly correlated
389 Harlequin-int 2 n.s 74.0 Weakly correlated
390 L1M2a 2 n.s 87.0 Weakly correlated
391 L1M2c 2 n.s 87.0 Weakly correlated
392 L1M3c 2 n.s 99.0 Weakly correlated
393 L1M3e 2 n.s 99.0 Weakly correlated
394 L1P4e 2 n.s 74.0 Weakly correlated
395 L1PBa1 2 n.s 74.0 Weakly correlated
396 LTR1 2 n.s 43.0 Moderately correlated
397 LTR10B1 2 * 28.9 Highly correlated
398 LTR10C 2 n.s 28.9 Highly correlated
399 LTR12 2 n.s 28.9 Highly correlated
400 LTR16B 2 n.s 99.0 Weakly correlated
401 LTR19C 2 * 43.0 Moderately correlated
402 LTR1B0 2 * 43.0 Moderately correlated
403 LTR21A 2 ** 28.9 Highly correlated
404 LTR21B 2 *** 28.9 Highly correlated
405 LTR27 2 * 43.0 Moderately correlated
406 LTR27E 2 n.s 43.0 Moderately correlated
407 LTR33B 2 n.s 99.0 Weakly correlated
408 LTR33C 2 n.s 99.0 Weakly correlated
409 LTR35A 2 ** 43.0 Moderately correlated
410 LTR37A 2 n.s 99.0 Weakly correlated
411 LTR39 2 n.s 43.0 Moderately correlated
412 LTR40b 2 n.s 99.0 Weakly correlated
413 LTR40c 2 n.s 99.0 Weakly correlated
414 LTR45B 2 n.s 74.0 Weakly correlated
415 LTR51 2 n.s 74.0 Weakly correlated
416 LTR52-int 2 * 99.0 Weakly correlated
417 LTR53-int 2 n.s 99.0 Weakly correlated
418 LTR55 2 n.s 99.0 Weakly correlated
419 LTR56 2 n.s 74.0 Weakly correlated
420 LTR5_Hs 2 n.s 0.0 Weakly correlated
421 LTR65 2 n.s 99.0 Weakly correlated
422 LTR75B 2 * 99.0 Weakly correlated
423 LTR76 2 n.s 74.0 Weakly correlated
424 LTR7B 2 n.s 28.9 Highly correlated
425 LTR82A 2 n.s 99.0 Weakly correlated
426 LTR82B 2 n.s 99.0 Weakly correlated
427 LTR83 2 n.s 99.0 Weakly correlated
428 LTR86A1 2 n.s 99.0 Weakly correlated
429 LTR87 2 n.s 99.0 Weakly correlated
430 LTR88c 2 n.s 99.0 Weakly correlated
431 LTR8B 2 n.s 43.0 Moderately correlated
432 MER11C 2 n.s 19.6 Weakly correlated
433 MER34D 2 * 74.0 Weakly correlated
434 MER48 2 * 28.9 Highly correlated
435 MER4A1_ 2 n.s 74.0 Weakly correlated
436 MER57B2 2 n.s 43.0 Moderately correlated
437 MER65-int 2 n.s 87.0 Weakly correlated
438 MER65C 2 n.s 74.0 Weakly correlated
439 MER66B 2 n.s 43.0 Moderately correlated
440 MER67A 2 n.s 99.0 Weakly correlated
441 MER67C 2 n.s 99.0 Weakly correlated
442 MER70-int 2 n.s 99.0 Weakly correlated
443 MER77 2 n.s 99.0 Weakly correlated
444 MER87 2 * 43.0 Moderately correlated
445 MER90a 2 n.s 99.0 Weakly correlated
446 MER92-int 2 n.s 99.0 Weakly correlated
447 MLT1D-int 2 n.s 99.0 Weakly correlated
448 MLT1I-int 2 n.s 99.0 Weakly correlated
449 MST-int 2 * 74.0 Weakly correlated
450 MSTD-int 2 n.s 74.0 Weakly correlated
451 MamGypLTR2b 2 n.s 99.0 Weakly correlated
452 Penelope1_Vert 2 n.s 319.0 Weakly correlated
453 X2_LINE 2 ** 319.0 Weakly correlated
454 X6B_LINE 2 n.s 99.0 Weakly correlated
455 AluYa8 1 n.s 15.2 Weakly correlated
456 AluYd8 1 n.s 15.2 Weakly correlated
457 AluYe6 1 n.s 74.0 Weakly correlated
458 AluYh3a3 1 n.s 15.2 Weakly correlated
459 AluYi6 1 n.s 15.2 Weakly correlated
460 AluYi6_4d 1 * 0.0 Weakly correlated
461 AluYk11 1 n.s 15.2 Weakly correlated
462 AluYk4 1 n.s 15.2 Weakly correlated
463 AmnSINE2 1 n.s 319.0 Weakly correlated
464 CR1-L3A_Croc 1 * 319.0 Weakly correlated
465 ERVL47-int 1 n.s 74.0 Weakly correlated
466 HERV9NC-int 1 n.s 19.6 Weakly correlated
467 HERVIP10F-int 1 n.s 28.9 Highly correlated
468 HERVK13-int 1 n.s 19.6 Weakly correlated
469 HERVK14-int 1 n.s 28.9 Highly correlated
470 HERVL-int 1 n.s 74.0 Weakly correlated
471 HERVL66-int 1 n.s 43.0 Moderately correlated
472 HERVL74-int 1 n.s 99.0 Weakly correlated
473 HUERS-P2-int 1 n.s 43.0 Moderately correlated
474 L1M6B 1 n.s 99.0 Weakly correlated
475 L1MEg1 1 n.s 99.0 Weakly correlated
476 L1P 1 ** 19.6 Weakly correlated
477 L1P4d 1 n.s 74.0 Weakly correlated
478 L1P5 1 n.s 74.0 Weakly correlated
479 L1PBb 1 n.s 74.0 Weakly correlated
480 LOR1-int 1 n.s 74.0 Weakly correlated
481 LOR1b 1 n.s 74.0 Weakly correlated
482 LTR103b_Mam 1 n.s 99.0 Weakly correlated
483 LTR105_Mam 1 n.s 99.0 Weakly correlated
484 LTR106_Mam 1 n.s 99.0 Weakly correlated
485 LTR12_ 1 n.s 28.9 Highly correlated
486 LTR13_ 1 n.s 28.9 Highly correlated
487 LTR14B 1 n.s 28.9 Highly correlated
488 LTR16D2 1 n.s 99.0 Weakly correlated
489 LTR18B 1 n.s 43.0 Moderately correlated
490 LTR19A 1 n.s 43.0 Moderately correlated
491 LTR1B 1 n.s 43.0 Moderately correlated
492 LTR1C 1 * 43.0 Moderately correlated
493 LTR1D1 1 n.s 43.0 Moderately correlated
494 LTR1E 1 n.s 43.0 Moderately correlated
495 LTR1F 1 n.s 43.0 Moderately correlated
496 LTR22B1 1 n.s 28.9 Highly correlated
497 LTR24 1 n.s 74.0 Weakly correlated
498 LTR24B 1 n.s 74.0 Weakly correlated
499 LTR25 1 n.s 43.0 Moderately correlated
500 LTR2752 1 n.s 43.0 Moderately correlated
501 LTR27C 1 n.s 43.0 Moderately correlated
502 LTR27D 1 n.s 43.0 Moderately correlated
503 LTR29 1 n.s 43.0 Moderately correlated
504 LTR35 1 * 43.0 Moderately correlated
505 LTR37-int 1 n.s 99.0 Weakly correlated
506 LTR38 1 n.s 74.0 Weakly correlated
507 LTR38-int 1 n.s 74.0 Weakly correlated
508 LTR3B_ 1 n.s 28.9 Highly correlated
509 LTR44 1 n.s 74.0 Weakly correlated
510 LTR46 1 n.s 43.0 Moderately correlated
511 LTR47A 1 n.s 74.0 Weakly correlated
512 LTR47A2 1 n.s 74.0 Weakly correlated
513 LTR53B 1 n.s 99.0 Weakly correlated
514 LTR57 1 n.s 74.0 Weakly correlated
515 LTR58 1 * 99.0 Weakly correlated
516 LTR60B 1 n.s 74.0 Weakly correlated
517 LTR62 1 n.s 74.0 Weakly correlated
518 LTR64 1 n.s 74.0 Weakly correlated
519 LTR68 1 n.s 99.0 Weakly correlated
520 LTR6B 1 n.s 19.6 Weakly correlated
521 LTR71B 1 n.s 43.0 Moderately correlated
522 LTR72 1 n.s 74.0 Weakly correlated
523 LTR77 1 n.s 94.0 Weakly correlated
524 LTR7C 1 n.s 28.9 Highly correlated
525 LTR80A 1 n.s 99.0 Weakly correlated
526 LTR80B 1 n.s 99.0 Weakly correlated
527 LTR81 1 n.s 99.0 Weakly correlated
528 LTR81AB 1 n.s 99.0 Weakly correlated
529 LTR86A2 1 n.s 99.0 Weakly correlated
530 LTR86B1 1 n.s 99.0 Weakly correlated
531 LTR90B 1 n.s 99.0 Weakly correlated
532 LTR9C 1 n.s 43.0 Moderately correlated
533 MER31-int 1 n.s 99.0 Weakly correlated
534 MER34B-int 1 n.s 99.0 Weakly correlated
535 MER34C_ 1 n.s 87.0 Weakly correlated
536 MER41C 1 n.s 74.0 Weakly correlated
537 MER4D 1 n.s 74.0 Weakly correlated
538 MER4D0 1 n.s 74.0 Weakly correlated
539 MER50-int 1 n.s 43.0 Moderately correlated
540 MER50B 1 n.s 43.0 Moderately correlated
541 MER50C 1 * 43.0 Moderately correlated
542 MER51B 1 n.s 43.0 Moderately correlated
543 MER51D 1 n.s 43.0 Moderately correlated
544 MER51E 1 n.s 43.0 Moderately correlated
545 MER57A-int 1 n.s 43.0 Moderately correlated
546 MER57C2 1 n.s 87.0 Weakly correlated
547 MER57D 1 n.s 87.0 Weakly correlated
548 MER57F 1 n.s 74.0 Weakly correlated
549 MER61B 1 n.s 43.0 Moderately correlated
550 MER65A 1 n.s 74.0 Weakly correlated
551 MER66A 1 n.s 43.0 Moderately correlated
552 MER66D 1 n.s 43.0 Moderately correlated
553 MER70C 1 n.s 99.0 Weakly correlated
554 MER76 1 n.s 99.0 Weakly correlated
555 MER83 1 n.s 43.0 Moderately correlated
556 MER83B-int 1 n.s 99.0 Weakly correlated
557 MER84-int 1 n.s 74.0 Weakly correlated
558 MER89-int 1 n.s 99.0 Weakly correlated
559 MER90 1 n.s 99.0 Weakly correlated
560 MER92A 1 n.s 99.0 Weakly correlated
561 MER92D 1 n.s 99.0 Weakly correlated
562 MER9a1 1 n.s 19.6 Weakly correlated
563 MER9a2 1 n.s 19.6 Weakly correlated
564 MLT1C-int 1 n.s 94.0 Weakly correlated
565 MLT1E 1 n.s 99.0 Weakly correlated
566 MLT1E2-int 1 n.s 99.0 Weakly correlated
567 MLT2B5 1 n.s 87.0 Weakly correlated
568 MLT2E 1 n.s 99.0 Weakly correlated
569 MSTA-int 1 n.s 43.0 Moderately correlated
570 MSTB-int 1 n.s 43.0 Moderately correlated
571 MSTB1-int 1 n.s 74.0 Weakly correlated
572 MSTC-int 1 n.s 74.0 Weakly correlated
573 MamGyp-int 1 n.s 99.0 Weakly correlated
574 MamRep1151 1 n.s 99.0 Weakly correlated
575 Mam_R4 1 n.s 99.0 Weakly correlated
576 PABL_A 1 n.s 43.0 Moderately correlated
577 PABL_B 1 n.s 43.0 Moderately correlated
578 PABL_B-int 1 n.s 74.0 Weakly correlated
579 PRIMA4-int 1 n.s 74.0 Weakly correlated
580 UCON51 1 ** 319.0 Weakly correlated
581 X7A_LINE 1 n.s 319.0 Weakly correlated
582 X8_LINE 1 * 319.0 Weakly correlated
583 X9_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 SVA_D 480 **** 15.2 Weakly correlated
2 SVA_C 136 **** 15.2 Weakly correlated
3 SVA_B 107 **** 15.2 Weakly correlated
4 AluJb 105 n.s 74.0 Weakly correlated
5 L2a 102 n.s 99.0 Weakly correlated
6 SVA_A 65 **** 19.6 Weakly correlated
7 AluSx1 64 n.s 74.0 Weakly correlated
8 AluJo 63 n.s 74.0 Weakly correlated
9 L1PA16 56 n.s 74.0 Weakly correlated
10 AluSx 55 n.s 74.0 Weakly correlated
11 SVA_F 54 **** 0.0 Weakly correlated
12 L1MC4 52 n.s 99.0 Weakly correlated
13 MLT1A 51 **** 99.0 Weakly correlated
14 AluJr 47 n.s 74.0 Weakly correlated
15 AluSz 46 n.s 74.0 Weakly correlated
16 L2b 45 n.s 99.0 Weakly correlated
17 MSTA 42 n.s 43.0 Moderately correlated
18 L2 37 n.s 99.0 Weakly correlated
19 L2c 32 n.s 99.0 Weakly correlated
20 L1PA17 28 n.s 74.0 Weakly correlated
21 MIRb 28 n.s 99.0 Weakly correlated
22 MLT1B 27 n.s 99.0 Weakly correlated
23 L1M5 26 n.s 99.0 Weakly correlated
24 HAL1 25 n.s 99.0 Weakly correlated
25 AluSq2 25 n.s 74.0 Weakly correlated
26 THE1D 25 n.s 43.0 Moderately correlated
27 AluY 24 n.s 74.0 Weakly correlated
28 AluSz6 22 n.s 74.0 Weakly correlated
29 L1ME1 22 n.s 99.0 Weakly correlated
30 MSTD 22 n.s 74.0 Weakly correlated
31 AluSp 22 n.s 74.0 Weakly correlated
32 L1M1 22 n.s 74.0 Weakly correlated
33 L1MA3 22 n.s 74.0 Weakly correlated
34 AluSx3 21 n.s 74.0 Weakly correlated
35 SVA_E 21 **** 0.0 Weakly correlated
36 L1MEg 19 n.s 99.0 Weakly correlated
37 MSTB 18 n.s 43.0 Moderately correlated
38 MLT1K 18 n.s 99.0 Weakly correlated
39 L1MB7 18 n.s 99.0 Weakly correlated
40 L1MC1 16 n.s 99.0 Weakly correlated
41 L1MEd 16 n.s 99.0 Weakly correlated
42 L1M4 16 n.s 99.0 Weakly correlated
43 AluJr4 16 n.s 74.0 Weakly correlated
44 L1MEc 15 n.s 99.0 Weakly correlated
45 L1MD2 15 n.s 99.0 Weakly correlated
46 MLT1D 14 n.s 99.0 Weakly correlated
47 L1MC5a 14 n.s 99.0 Weakly correlated
48 LTR16B2 12 *** 99.0 Weakly correlated
49 L1MA9 12 n.s 99.0 Weakly correlated
50 AluSq 12 n.s 74.0 Weakly correlated
51 FLAM_C 12 n.s 74.0 Weakly correlated
52 AluSc8 11 n.s 74.0 Weakly correlated
53 L1MC2 11 n.s 99.0 Weakly correlated
54 AluSc 11 n.s 74.0 Weakly correlated
55 L1ME3A 11 n.s 99.0 Weakly correlated
56 L1MCa 10 n.s 99.0 Weakly correlated
57 L1MD1 10 n.s 99.0 Weakly correlated
58 L1PA15 10 n.s 74.0 Weakly correlated
59 L1MC4a 10 n.s 99.0 Weakly correlated
60 L1MEf 10 n.s 99.0 Weakly correlated
61 AluSg 9 n.s 74.0 Weakly correlated
62 L1MA4 9 n.s 87.0 Weakly correlated
63 L1PA14 9 n.s 74.0 Weakly correlated
64 LTR30 9 **** 28.9 Highly correlated
65 L1M2 9 n.s 99.0 Weakly correlated
66 MLT2D 9 n.s 99.0 Weakly correlated
67 L1MB5 9 n.s 99.0 Weakly correlated
68 HAL1b 8 n.s 99.0 Weakly correlated
69 L1MC3 8 n.s 99.0 Weakly correlated
70 L1MD 8 n.s 99.0 Weakly correlated
71 L1ME2 8 n.s 99.0 Weakly correlated
72 MLT1F2 8 n.s 99.0 Weakly correlated
73 L1MA4A 8 n.s 87.0 Weakly correlated
74 L1MC5 8 n.s 99.0 Weakly correlated
75 LTR12C 8 n.s 19.6 Weakly correlated
76 MIR3 8 n.s 99.0 Weakly correlated
77 MIRc 8 n.s 99.0 Weakly correlated
78 L1MA5A 7 n.s 87.0 Weakly correlated
79 MER54A 7 * 87.0 Weakly correlated
80 L1M4c 7 n.s 99.0 Weakly correlated
81 MLT1A0 7 n.s 99.0 Weakly correlated
82 MIR 7 n.s 99.0 Weakly correlated
83 MSTB1 7 n.s 74.0 Weakly correlated
84 L1MDa 7 n.s 99.0 Weakly correlated
85 L1M7 6 n.s 99.0 Weakly correlated
86 L1MEi 6 n.s 99.0 Weakly correlated
87 L1PB3 6 n.s 74.0 Weakly correlated
88 MLT2B2 6 n.s 99.0 Weakly correlated
89 LTR33 6 n.s 99.0 Weakly correlated
90 L1MB3 6 n.s 99.0 Weakly correlated
91 MLT1J 6 n.s 99.0 Weakly correlated
92 L1MB8 6 n.s 99.0 Weakly correlated
93 L1MD3 6 n.s 99.0 Weakly correlated
94 L1ME4a 6 n.s 99.0 Weakly correlated
95 L3 6 n.s 99.0 Weakly correlated
96 MLT1F1 6 n.s 99.0 Weakly correlated
97 MLT2B3 6 n.s 99.0 Weakly correlated
98 L1MB4 5 n.s 99.0 Weakly correlated
99 HAL1ME 5 n.s 99.0 Weakly correlated
100 L1M3 5 n.s 99.0 Weakly correlated
101 L1PB1 5 n.s 74.0 Weakly correlated
102 L1ME4b 5 n.s 99.0 Weakly correlated
103 FRAM 5 n.s 74.0 Weakly correlated
104 L1PA13 5 n.s 74.0 Weakly correlated
105 L1MA1 4 n.s 74.0 Weakly correlated
106 L1ME3Cz 4 n.s 99.0 Weakly correlated
107 MLT1E1A 4 n.s 99.0 Weakly correlated
108 AluSx4 4 n.s 74.0 Weakly correlated
109 HERVFH21-int 4 * 28.9 Highly correlated
110 L1MA6 4 n.s 87.0 Weakly correlated
111 MLT1O 4 n.s 99.0 Weakly correlated
112 L1ME3B 4 n.s 99.0 Weakly correlated
113 L1ME3 4 n.s 99.0 Weakly correlated
114 MER52-int 4 n.s 99.0 Weakly correlated
115 AluSg4 4 n.s 74.0 Weakly correlated
116 MLT1H 4 n.s 99.0 Weakly correlated
117 FLAM_A 4 n.s 74.0 Weakly correlated
118 L1PB4 4 n.s 99.0 Weakly correlated
119 Alu 3 n.s 74.0 Weakly correlated
120 L1MB1 3 n.s 99.0 Weakly correlated
121 L1MCc 3 n.s 99.0 Weakly correlated
122 MLT1C 3 n.s 94.0 Weakly correlated
123 L1MCb 3 n.s 99.0 Weakly correlated
124 L1ME5 3 n.s 99.0 Weakly correlated
125 L1M8 3 n.s 99.0 Weakly correlated
126 L1PA6 3 n.s 28.9 Highly correlated
127 MamGypLTR1c 3 n.s 99.0 Weakly correlated
128 L1PA12 3 n.s 74.0 Weakly correlated
129 LTR16D 3 n.s 99.0 Weakly correlated
130 MER4CL34 3 n.s 43.0 Moderately correlated
131 MLT1F 3 n.s 99.0 Weakly correlated
132 L1MA5 3 n.s 87.0 Weakly correlated
133 LTR13 3 n.s 19.6 Weakly correlated
134 MER39 3 n.s 74.0 Weakly correlated
135 MSTA1 3 n.s 74.0 Weakly correlated
136 MamGypLTR1d 3 * 99.0 Weakly correlated
137 X7B_LINE 3 * 319.0 Weakly correlated
138 HERV17-int 3 n.s 28.9 Highly correlated
139 L1MA8 3 n.s 87.0 Weakly correlated
140 LTR19-int 3 n.s 43.0 Moderately correlated
141 LTR33A 3 n.s 99.0 Weakly correlated
142 L1M4a1 3 n.s 99.0 Weakly correlated
143 L1M4b 3 n.s 99.0 Weakly correlated
144 L1ME3G 3 n.s 99.0 Weakly correlated
145 MLT1G3 3 n.s 99.0 Weakly correlated
146 AluYc 2 n.s 74.0 Weakly correlated
147 L1ME2z 2 n.s 99.0 Weakly correlated
148 L1ME3F 2 n.s 99.0 Weakly correlated
149 LTR85c 2 n.s 99.0 Weakly correlated
150 MER41-int 2 n.s 74.0 Weakly correlated
151 MLT1A1 2 n.s 87.0 Weakly correlated
152 MLT1J1-int 2 n.s 99.0 Weakly correlated
153 MLT1L 2 n.s 99.0 Weakly correlated
154 MamGypsy2-I 2 n.s 99.0 Weakly correlated
155 L1MEh 2 n.s 99.0 Weakly correlated
156 LTR102_Mam 2 n.s 99.0 Weakly correlated
157 LTR16B1 2 n.s 99.0 Weakly correlated
158 LTR26 2 n.s 74.0 Weakly correlated
159 L1MB2 2 n.s 99.0 Weakly correlated
160 L1PBa 2 n.s 74.0 Weakly correlated
161 LTR49 2 n.s 74.0 Weakly correlated
162 LTR9D 2 n.s 43.0 Moderately correlated
163 AluSg7 2 n.s 74.0 Weakly correlated
164 HERV9N-int 2 n.s 19.6 Weakly correlated
165 L1M6 2 n.s 99.0 Weakly correlated
166 L1MEj 2 n.s 99.0 Weakly correlated
167 LTR35A 2 ** 43.0 Moderately correlated
168 LTR81A 2 n.s 99.0 Weakly correlated
169 MER21C 2 n.s 99.0 Weakly correlated
170 MLT1A0-int 2 n.s 99.0 Weakly correlated
171 MLT2B4 2 n.s 99.0 Weakly correlated
172 ERV24_Prim-int 2 n.s 74.0 Weakly correlated
173 L1PA4 2 n.s 19.6 Weakly correlated
174 L4_A_Mam 2 n.s 99.0 Weakly correlated
175 LTR16 2 n.s 99.0 Weakly correlated
176 MLT1I-int 2 n.s 99.0 Weakly correlated
177 THE1B 2 n.s 43.0 Moderately correlated
178 AluSc5 2 n.s 74.0 Weakly correlated
179 HERVIP10FH-int 2 n.s 28.9 Highly correlated
180 L1ME4c 2 n.s 99.0 Weakly correlated
181 L1P4 2 n.s 74.0 Weakly correlated
182 LTR37B 2 n.s 99.0 Weakly correlated
183 MLT2C2 2 n.s 99.0 Weakly correlated
184 HERVIP10B3-int 2 n.s 28.9 Highly correlated
185 L1PREC2 2 n.s 43.0 Moderately correlated
186 LTR84a 2 n.s 99.0 Weakly correlated
187 MLT1J1 2 n.s 99.0 Weakly correlated
188 MamGypLTR1a 2 n.s 99.0 Weakly correlated
189 THE1C 2 n.s 43.0 Moderately correlated
190 LTR33A_ 2 n.s 99.0 Weakly correlated
191 LTR78 2 n.s 99.0 Weakly correlated
192 MER4-int 2 n.s 74.0 Weakly correlated
193 MER4E1 2 n.s 74.0 Weakly correlated
194 MER54B 2 n.s 87.0 Weakly correlated
195 MLT1M 2 n.s 99.0 Weakly correlated
196 L1M2a1 1 n.s 79.0 Weakly correlated
197 LTR12D 1 n.s 19.6 Weakly correlated
198 LTR24B 1 n.s 74.0 Weakly correlated
199 LTR2752 1 n.s 43.0 Moderately correlated
200 LTR64 1 n.s 74.0 Weakly correlated
201 LTR65 1 n.s 99.0 Weakly correlated
202 LTR83 1 n.s 99.0 Weakly correlated
203 MER57B2 1 n.s 43.0 Moderately correlated
204 MER65-int 1 n.s 87.0 Weakly correlated
205 MLT1H1 1 n.s 99.0 Weakly correlated
206 AluYf1 1 n.s 19.6 Weakly correlated
207 AluYj4 1 n.s 0.0 Weakly correlated
208 ERVL47-int 1 n.s 74.0 Weakly correlated
209 L1MA2 1 n.s 74.0 Weakly correlated
210 L1PA8 1 n.s 74.0 Weakly correlated
211 LTR40A1 1 n.s 99.0 Weakly correlated
212 LTR53-int 1 n.s 99.0 Weakly correlated
213 LTR9A1 1 n.s 43.0 Moderately correlated
214 MamGypLTR2c 1 n.s 99.0 Weakly correlated
215 MamRep1151 1 n.s 99.0 Weakly correlated
216 AluSq4 1 n.s 74.0 Weakly correlated
217 HERVH-int 1 n.s 28.9 Highly correlated
218 Harlequin-int 1 n.s 74.0 Weakly correlated
219 L1MC 1 n.s 99.0 Weakly correlated
220 L1P4a 1 n.s 74.0 Weakly correlated
221 LTR37A 1 n.s 99.0 Weakly correlated
222 LTR48 1 n.s 74.0 Weakly correlated
223 MER21-int 1 n.s 99.0 Weakly correlated
224 MER31A 1 n.s 87.0 Weakly correlated
225 MER34D 1 n.s 74.0 Weakly correlated
226 MER74A 1 n.s 99.0 Weakly correlated
227 MER9a2 1 n.s 19.6 Weakly correlated
228 MLT1J-int 1 n.s 99.0 Weakly correlated
229 MLT1J2 1 n.s 99.0 Weakly correlated
230 MamSINE1 1 n.s 99.0 Weakly correlated
231 PRIMA4-int 1 n.s 74.0 Weakly correlated
232 L1PB 1 n.s 74.0 Weakly correlated
233 LTR8A 1 n.s 43.0 Moderately correlated
234 LTR9 1 n.s 43.0 Moderately correlated
235 MER4D 1 n.s 74.0 Weakly correlated
236 MER50-int 1 n.s 43.0 Moderately correlated
237 MIR1_Amn 1 n.s 319.0 Weakly correlated
238 MLT1G 1 n.s 99.0 Weakly correlated
239 MLT2A2 1 n.s 74.0 Weakly correlated
240 X6B_LINE 1 n.s 99.0 Weakly correlated
241 FAM 1 n.s 87.0 Weakly correlated
242 HAL1M8 1 n.s 99.0 Weakly correlated
243 HERVL66-int 1 n.s 43.0 Moderately correlated
244 LTR12 1 n.s 28.9 Highly correlated
245 LTR28B 1 n.s 43.0 Moderately correlated
246 LTR39 1 n.s 43.0 Moderately correlated
247 LTR51 1 n.s 74.0 Weakly correlated
248 LTR85b 1 n.s 99.0 Weakly correlated
249 MER4D1 1 n.s 74.0 Weakly correlated
250 MLT1E1 1 n.s 99.0 Weakly correlated
251 MLT1H2 1 n.s 99.0 Weakly correlated
252 MLT2C1 1 n.s 99.0 Weakly correlated
253 HERV35I-int 1 n.s 43.0 Moderately correlated
254 L1M3b 1 n.s 99.0 Weakly correlated
255 L1M3c 1 n.s 99.0 Weakly correlated
256 L1ME3D 1 n.s 99.0 Weakly correlated
257 L1PB2 1 n.s 74.0 Weakly correlated
258 LTR10D 1 n.s 28.9 Highly correlated
259 LTR16A1 1 n.s 99.0 Weakly correlated
260 LTR50 1 n.s 99.0 Weakly correlated
261 LTR84b 1 n.s 99.0 Weakly correlated
262 LTR88c 1 n.s 99.0 Weakly correlated
263 MSTC 1 n.s 74.0 Weakly correlated
264 X6A_LINE 1 n.s 99.0 Weakly correlated
265 AluYh3 1 n.s 15.2 Weakly correlated
266 ERVL-B4-int 1 n.s 99.0 Weakly correlated
267 HERVP71A-int 1 n.s 43.0 Moderately correlated
268 HERVS71-int 1 n.s 28.9 Highly correlated
269 L1HS 1 n.s 8.6 Weakly correlated
270 L1M4a2 1 n.s 99.0 Weakly correlated
271 L1MA10 1 n.s 99.0 Weakly correlated
272 L1MEb 1 n.s 99.0 Weakly correlated
273 LTR16A 1 n.s 99.0 Weakly correlated
274 LTR81C 1 n.s 99.0 Weakly correlated
275 LTR88a 1 n.s 99.0 Weakly correlated
276 MER4E 1 n.s 74.0 Weakly correlated
277 MER92-int 1 n.s 99.0 Weakly correlated
278 MLT1E3 1 n.s 99.0 Weakly correlated
279 AluSq10 1 n.s 74.0 Weakly correlated
280 AluYa5 1 n.s 15.2 Weakly correlated
281 ERV3-16A3_LTR 1 n.s 99.0 Weakly correlated
282 L1MA7 1 n.s 87.0 Weakly correlated
283 L1ME3C 1 n.s 99.0 Weakly correlated
284 LTR16E1 1 n.s 99.0 Weakly correlated
285 MER52A 1 n.s 74.0 Weakly correlated
286 MER65C 1 n.s 74.0 Weakly correlated
287 MER67D 1 n.s 99.0 Weakly correlated
288 MER73 1 n.s 87.0 Weakly correlated
289 MLT1G1 1 n.s 99.0 Weakly correlated
290 MSTB2 1 n.s 74.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 HAL1B 99.0 Weakly correlated
2 L2 99.0 Weakly correlated
3 L2A 99.0 Weakly correlated
4 L2C 99.0 Weakly correlated
5 LTR16B2 99.0 Weakly correlated
6 LTR30 28.9 Highly correlated
7 LTR33 99.0 Weakly correlated
8 MSTB 43.0 Moderately correlated
9 MSTB1 74.0 Weakly correlated
10 MSTD 74.0 Weakly correlated
11 SVA_A 19.6 Weakly correlated
12 SVA_B 15.2 Weakly correlated
13 SVA_C 15.2 Weakly correlated
14 SVA_D 15.2 Weakly correlated
15 SVA_E 0.0 Weakly correlated
16 SVA_F 0.0 Weakly correlated