ZRdb KZFP & Repeats
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Human_ZNF324

  • Protein
    Zinc finger protein 324A
  • Length
    553
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    99.0 Mya
  • Uniprot_ID
    O75467
  • NCBI_ID
    25799
Sequence:
MAFEDVAVYFSQEEWGLLDTAQRALYRRVMLDNFALVASLGLSTSRPRVVIQLERGEEPWVPSGTDTTLSRTTYRRRNPGSWSLTEDRDVSGEWPRAFPDTPPGMTTSVFPVAGACHSVKSLQRQRGASPSRERKPTGVSVIYWERLLLGSGSGQASVSLRLTSPLRPPEGVRLREKTLTEHALLGRQPRTPERQKPCAQEVPGRTFGSAQDLEAAGGRGHHRMGAVWQEPHRLLGGQEPSTWDELGEALHAGEKSFECRACSKVFVKSSDLLKHLRTHTGERPYECAQCGKAFSQTSHLTQHQRIHSGETPYACPVCGKAFRHSSSLVRHQRIHTAEKSFRCSECGKAFSHGSNLSQHRKIHAGGRPYACAQCGRRFCRNSHLIQHERTHTGEKPFVCALCGAAFSQGSSLFKHQRVHTGEKPFACPQCGRAFSHSSNLTQHQLLHTGERPFRCVDCGKAFAKGAVLLSHRRIHTGEKPFVCTQCGRAFRERPALFHHQRIHTGEKTVRRSRASLHPQARSVAGASSEGAPAKETEPTPASGPAAVSQPAEV
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
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# Domain name Pos
1 KRAB 1..72
2 C2h2 257..279
3 C2h2 285..307
4 C2h2 313..335
5 C2h2 341..363
6 C2h2 369..391
7 C2h2 397..419
8 C2h2 425..447
9 C2h2 453..475
10 C2h2 481..503
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process cell population proliferation
6 Biological Process G1/S transition of mitotic cell cycle
7 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 1428 **** 99.0 Highly correlated
2 L2a 1040 **** 99.0 Highly correlated
3 MIR 939 **** 99.0 Highly correlated
4 AluSx1 867 **** 74.0 Weakly correlated
5 AluJb 853 **** 74.0 Weakly correlated
6 AluSx 831 **** 74.0 Weakly correlated
7 MIRc 755 **** 99.0 Highly correlated
8 L2c 730 **** 99.0 Highly correlated
9 L2b 708 **** 99.0 Highly correlated
10 MIR3 641 **** 99.0 Highly correlated
11 AluY 620 **** 74.0 Weakly correlated
12 AluSz 612 **** 74.0 Weakly correlated
13 AluJo 468 **** 74.0 Weakly correlated
14 AluJr 454 **** 74.0 Weakly correlated
15 AluSq2 377 **** 74.0 Weakly correlated
16 L2 367 **** 99.0 Highly correlated
17 AluSp 354 **** 74.0 Weakly correlated
18 AluSg 281 **** 74.0 Weakly correlated
19 AluSx3 266 **** 74.0 Weakly correlated
20 AluSz6 244 ** 74.0 Weakly correlated
21 AluSc 214 **** 74.0 Weakly correlated
22 L3 160 n.s 99.0 Highly correlated
23 L1MC4 143 n.s 99.0 Highly correlated
24 MIR1_Amn 129 **** 319.0 Weakly correlated
25 AluSq 128 **** 74.0 Weakly correlated
26 AluSc8 126 * 74.0 Weakly correlated
27 L1M5 125 n.s 99.0 Highly correlated
28 L1PA2 125 n.s 15.2 Weakly correlated
29 FLAM_C 110 **** 74.0 Weakly correlated
30 L1PA3 109 n.s 19.6 Weakly correlated
31 MLT1C 93 n.s 94.0 Weakly correlated
32 L1MB3 92 n.s 99.0 Highly correlated
33 AluJr4 88 n.s 74.0 Weakly correlated
34 L1MB7 84 n.s 99.0 Highly correlated
35 AluSx4 83 **** 74.0 Weakly correlated
36 L1M4 77 n.s 99.0 Highly correlated
37 L1MEg 77 n.s 99.0 Highly correlated
38 MLT1K 77 * 99.0 Highly correlated
39 L1ME1 75 n.s 99.0 Highly correlated
40 L3b 72 **** 99.0 Highly correlated
41 LTR13 70 **** 19.6 Weakly correlated
42 MLT1B 70 n.s 99.0 Highly correlated
43 MamRTE1 70 **** 99.0 Highly correlated
44 L1MEc 64 n.s 99.0 Highly correlated
45 AluSg7 61 *** 74.0 Weakly correlated
46 L1MC5a 61 n.s 99.0 Highly correlated
47 MLT1H 61 ** 99.0 Highly correlated
48 LTR8 60 **** 43.0 Weakly correlated
49 L1ME4a 59 n.s 99.0 Highly correlated
50 FRAM 57 **** 74.0 Weakly correlated
51 L1MEd 57 n.s 99.0 Highly correlated
52 MLT1J 56 n.s 99.0 Highly correlated
53 AluSg4 55 *** 74.0 Weakly correlated
54 MLT1I 53 ** 99.0 Highly correlated
55 MLT1L 53 * 99.0 Highly correlated
56 L1MB8 50 n.s 99.0 Highly correlated
57 HAL1 48 n.s 99.0 Highly correlated
58 MLT1A0 48 n.s 99.0 Highly correlated
59 L1MA3 47 n.s 74.0 Weakly correlated
60 AmnSINE1 46 **** 319.0 Weakly correlated
61 L1M1 46 n.s 74.0 Weakly correlated
62 L1MA9 46 n.s 99.0 Highly correlated
63 L1ME3G 45 n.s 99.0 Highly correlated
64 FLAM_A 44 ** 74.0 Weakly correlated
65 L1M2 44 n.s 99.0 Highly correlated
66 L1MEf 43 n.s 99.0 Highly correlated
67 AluSc5 42 * 74.0 Weakly correlated
68 AluYm1 42 *** 19.6 Weakly correlated
69 L1ME4b 42 n.s 99.0 Highly correlated
70 L1MD2 41 n.s 99.0 Highly correlated
71 L1M4b 40 n.s 99.0 Highly correlated
72 L1MA4 40 n.s 87.0 Weakly correlated
73 L1MB2 40 n.s 99.0 Highly correlated
74 L1MC5 39 n.s 99.0 Highly correlated
75 LTR10A 39 **** 28.9 Weakly correlated
76 Alu 38 **** 74.0 Weakly correlated
77 L1MB5 38 n.s 99.0 Highly correlated
78 L1MC3 38 n.s 99.0 Highly correlated
79 L1MD 38 n.s 99.0 Highly correlated
80 L1ME2 38 n.s 99.0 Highly correlated
81 L1ME4c 38 n.s 99.0 Highly correlated
82 MER4-int 37 * 74.0 Weakly correlated
83 AluYc 36 **** 74.0 Weakly correlated
84 LTR41C 36 **** 99.0 Highly correlated
85 MSTB1 36 * 74.0 Weakly correlated
86 L1PA7 35 n.s 74.0 Weakly correlated
87 L1M3 34 n.s 99.0 Highly correlated
88 L1PA4 34 n.s 19.6 Weakly correlated
89 MLT1D 34 n.s 99.0 Highly correlated
90 AluYj4 33 **** 0.0 Weakly correlated
91 L1PA13 33 n.s 74.0 Weakly correlated
92 L1PB1 32 n.s 74.0 Weakly correlated
93 L1ME3A 31 n.s 99.0 Highly correlated
94 MLT2D 31 ** 99.0 Highly correlated
95 LTR18A 30 **** 43.0 Weakly correlated
96 LTR76 30 **** 74.0 Weakly correlated
97 L1PA6 29 n.s 28.9 Weakly correlated
98 LTR33 29 n.s 99.0 Highly correlated
99 LTR50 29 **** 99.0 Highly correlated
100 LTR8B 29 **** 43.0 Weakly correlated
101 L1MA2 28 n.s 74.0 Weakly correlated
102 L1ME3Cz 28 n.s 99.0 Highly correlated
103 L1MA8 27 n.s 87.0 Weakly correlated
104 L4_A_Mam 27 n.s 99.0 Highly correlated
105 MLT1H2 27 ** 99.0 Highly correlated
106 L1PA5 26 n.s 19.6 Weakly correlated
107 LTR12C 26 n.s 19.6 Weakly correlated
108 LTR41B 26 **** 99.0 Highly correlated
109 MER11A 26 ** 28.9 Weakly correlated
110 MLT1F 26 n.s 99.0 Highly correlated
111 AluSq10 25 **** 74.0 Weakly correlated
112 L1PREC2 25 n.s 43.0 Weakly correlated
113 LTR9 25 **** 43.0 Weakly correlated
114 MER21C 25 n.s 99.0 Highly correlated
115 MER50 25 * 43.0 Weakly correlated
116 MLT1G 25 ** 99.0 Highly correlated
117 MamGypLTR3 25 **** 99.0 Highly correlated
118 THE1B 25 n.s 43.0 Weakly correlated
119 MLT1J2 24 n.s 99.0 Highly correlated
120 ERV3-16A3_I-int 23 n.s 99.0 Highly correlated
121 ERVL-E-int 23 n.s 99.0 Highly correlated
122 L1MB4 23 n.s 99.0 Highly correlated
123 LTR10F 23 **** 28.9 Weakly correlated
124 MER11B 23 **** 19.6 Weakly correlated
125 HUERS-P3-int 22 *** 43.0 Weakly correlated
126 L1MDa 22 n.s 99.0 Highly correlated
127 L1P4 22 n.s 74.0 Weakly correlated
128 MamSINE1 22 ** 99.0 Highly correlated
129 Plat_L3 22 **** 99.0 Highly correlated
130 HERVK-int 21 *** 28.9 Weakly correlated
131 L1M4c 21 n.s 99.0 Highly correlated
132 L1ME3B 21 n.s 99.0 Highly correlated
133 LTR25-int 21 *** 43.0 Weakly correlated
134 MLT1F2 21 n.s 99.0 Highly correlated
135 L1MA1 20 n.s 74.0 Weakly correlated
136 L1MA7 20 n.s 87.0 Weakly correlated
137 L1MC 20 n.s 99.0 Highly correlated
138 L1ME2z 20 n.s 99.0 Highly correlated
139 L1ME3 20 n.s 99.0 Highly correlated
140 LTR41 20 **** 99.0 Highly correlated
141 MER57-int 20 n.s 87.0 Weakly correlated
142 MLT1N2 20 n.s 99.0 Highly correlated
143 AluSq4 19 *** 74.0 Weakly correlated
144 AluYa5 19 n.s 15.2 Weakly correlated
145 L1P1 19 n.s 19.6 Weakly correlated
146 L1PA16 19 n.s 74.0 Weakly correlated
147 MLT1F1 19 n.s 99.0 Highly correlated
148 THE1C 19 n.s 43.0 Weakly correlated
149 ERVL-B4-int 18 n.s 99.0 Highly correlated
150 L1MA6 18 n.s 87.0 Weakly correlated
151 L1PA11 18 n.s 74.0 Weakly correlated
152 L1PA15 18 n.s 74.0 Weakly correlated
153 L1PA8 18 n.s 74.0 Weakly correlated
154 LTR16A1 18 * 99.0 Highly correlated
155 L1MC1 17 n.s 99.0 Highly correlated
156 L1MC4a 17 n.s 99.0 Highly correlated
157 L1MEi 17 n.s 99.0 Highly correlated
158 LTR55 17 **** 99.0 Highly correlated
159 MER41B 17 n.s 74.0 Weakly correlated
160 MamGypLTR3a 17 **** 99.0 Highly correlated
161 AluYf1 16 * 19.6 Weakly correlated
162 HERVIP10FH-int 16 *** 28.9 Weakly correlated
163 L1MA4A 16 n.s 87.0 Weakly correlated
164 L1MA5A 16 n.s 87.0 Weakly correlated
165 L1MD3 16 n.s 99.0 Highly correlated
166 L1PB3 16 n.s 74.0 Weakly correlated
167 LTR67B 16 n.s 99.0 Highly correlated
168 MSTD 16 n.s 74.0 Weakly correlated
169 HAL1ME 15 n.s 99.0 Highly correlated
170 L1MD1 15 n.s 99.0 Highly correlated
171 L4_C_Mam 15 n.s 99.0 Highly correlated
172 LTR16C 15 n.s 99.0 Highly correlated
173 LTR7C 15 **** 28.9 Weakly correlated
174 MER50-int 15 ** 43.0 Weakly correlated
175 MLT1E2 15 n.s 99.0 Highly correlated
176 MLT1G3 15 n.s 99.0 Highly correlated
177 MLT1O 15 n.s 99.0 Highly correlated
178 MSTA 15 n.s 43.0 Weakly correlated
179 PRIMA4-int 15 **** 74.0 Weakly correlated
180 THE1D 15 n.s 43.0 Weakly correlated
181 AluYb8 14 n.s 15.2 Weakly correlated
182 HERVH-int 14 n.s 28.9 Weakly correlated
183 L1M3f 14 n.s 87.0 Weakly correlated
184 L1PB4 14 n.s 99.0 Highly correlated
185 L1PBa 14 n.s 74.0 Weakly correlated
186 L2-3_Crp 14 ** 431.0 Weakly correlated
187 LTR13_ 14 **** 28.9 Weakly correlated
188 LTR16A 14 n.s 99.0 Highly correlated
189 LTR19A 14 **** 43.0 Weakly correlated
190 LTR71B 14 **** 43.0 Weakly correlated
191 MER31B 14 * 99.0 Highly correlated
192 MLT1J1 14 n.s 99.0 Highly correlated
193 HUERS-P3b-int 13 ** 43.0 Weakly correlated
194 L1HS 13 n.s 8.6 Weakly correlated
195 L1M6 13 n.s 99.0 Highly correlated
196 L1MA5 13 n.s 87.0 Weakly correlated
197 L1PA10 13 n.s 74.0 Weakly correlated
198 LTR91 13 **** 99.0 Highly correlated
199 MLT1G1 13 n.s 99.0 Highly correlated
200 MLT2B3 13 n.s 99.0 Highly correlated
201 MamRep605 13 n.s 99.0 Highly correlated
202 HAL1b 12 n.s 99.0 Highly correlated
203 L1M4a1 12 n.s 99.0 Highly correlated
204 L1ME3F 12 n.s 99.0 Highly correlated
205 LTR26 12 *** 74.0 Weakly correlated
206 MER4B-int 12 n.s 99.0 Highly correlated
207 MLT1A 12 n.s 99.0 Highly correlated
208 MLT1E1A 12 n.s 99.0 Highly correlated
209 MLT1M 12 ** 99.0 Highly correlated
210 L1MC2 11 n.s 99.0 Highly correlated
211 L1P2 11 n.s 28.9 Weakly correlated
212 L1PA15-16 11 n.s 74.0 Weakly correlated
213 L1PA17 11 n.s 74.0 Weakly correlated
214 LOR1-int 11 n.s 74.0 Weakly correlated
215 LTR88b 11 ** 99.0 Highly correlated
216 MER66-int 11 n.s 43.0 Weakly correlated
217 MER66B 11 n.s 43.0 Weakly correlated
218 MLT2C1 11 n.s 99.0 Highly correlated
219 MLT2F 11 n.s 99.0 Highly correlated
220 SVA_A 11 n.s 19.6 Weakly correlated
221 CR1_Mam 10 * 99.0 Highly correlated
222 FAM 10 n.s 87.0 Weakly correlated
223 HERV17-int 10 n.s 28.9 Weakly correlated
224 HERVL40-int 10 n.s 99.0 Highly correlated
225 L1PA14 10 n.s 74.0 Weakly correlated
226 LTR12E 10 **** 19.6 Weakly correlated
227 LTR33A 10 n.s 99.0 Highly correlated
228 LTR78 10 n.s 99.0 Highly correlated
229 MER41-int 10 n.s 74.0 Weakly correlated
230 MER41A 10 n.s 74.0 Weakly correlated
231 MER52A 10 n.s 74.0 Weakly correlated
232 MER57E3 10 **** 74.0 Weakly correlated
233 MSTB 10 n.s 43.0 Weakly correlated
234 HERVH48-int 9 ** 28.9 Weakly correlated
235 L1MB1 9 n.s 99.0 Highly correlated
236 L1MDb 9 n.s 99.0 Highly correlated
237 L1ME5 9 n.s 99.0 Highly correlated
238 LTR14B 9 *** 28.9 Weakly correlated
239 LTR40a 9 n.s 99.0 Highly correlated
240 LTR65 9 **** 99.0 Highly correlated
241 LTR72 9 **** 74.0 Weakly correlated
242 LTR82A 9 * 99.0 Highly correlated
243 LTR85a 9 n.s 99.0 Highly correlated
244 MER4D 9 n.s 74.0 Weakly correlated
245 MER52-int 9 n.s 99.0 Highly correlated
246 MER61-int 9 n.s 43.0 Weakly correlated
247 MER67C 9 n.s 99.0 Highly correlated
248 MamGypsy2-I 9 n.s 99.0 Highly correlated
249 SVA_D 9 n.s 15.2 Weakly correlated
250 AluYe5 8 n.s 74.0 Weakly correlated
251 L1M3e 8 n.s 99.0 Highly correlated
252 L1MCa 8 n.s 99.0 Highly correlated
253 L1ME3E 8 n.s 99.0 Highly correlated
254 LTR19B 8 *** 43.0 Weakly correlated
255 LTR33A_ 8 n.s 99.0 Highly correlated
256 LTR4 8 **** 28.9 Weakly correlated
257 LTR43 8 ** 74.0 Weakly correlated
258 LTR7 8 n.s 19.6 Weakly correlated
259 MER4C 8 * 74.0 Weakly correlated
260 MER66C 8 ** 43.0 Weakly correlated
261 MER68 8 n.s 99.0 Highly correlated
262 MER76 8 * 99.0 Highly correlated
263 MER89 8 n.s 99.0 Highly correlated
264 MLT2B4 8 n.s 99.0 Highly correlated
265 THE1B-int 8 n.s 43.0 Weakly correlated
266 X7A_LINE 8 *** 319.0 Weakly correlated
267 AluYk3 7 n.s 19.6 Weakly correlated
268 ERV24_Prim-int 7 * 74.0 Weakly correlated
269 HAL1M8 7 n.s 99.0 Highly correlated
270 L1PA12 7 n.s 74.0 Weakly correlated
271 LFSINE_Vert 7 n.s 319.0 Weakly correlated
272 LTR104_Mam 7 n.s 99.0 Highly correlated
273 LTR16 7 n.s 99.0 Highly correlated
274 LTR16A2 7 n.s 99.0 Highly correlated
275 LTR1A2 7 n.s 43.0 Weakly correlated
276 LTR44 7 **** 74.0 Weakly correlated
277 LTR83 7 ** 99.0 Highly correlated
278 LTR85b 7 * 99.0 Highly correlated
279 LTR88a 7 ** 99.0 Highly correlated
280 LTR88c 7 ** 99.0 Highly correlated
281 LTR90A 7 **** 99.0 Highly correlated
282 MER39 7 n.s 74.0 Weakly correlated
283 MER4B 7 n.s 74.0 Weakly correlated
284 MER65C 7 * 74.0 Weakly correlated
285 MER77B 7 n.s 99.0 Highly correlated
286 MSTA-int 7 n.s 43.0 Weakly correlated
287 Penelope1_Vert 7 *** 319.0 Weakly correlated
288 AluYh3 6 n.s 15.2 Weakly correlated
289 AluYh3a3 6 *** 15.2 Weakly correlated
290 CR1-16_AMi 6 *** 319.0 Weakly correlated
291 CR1-L3A_Croc 6 **** 319.0 Weakly correlated
292 HERV4_I-int 6 n.s 43.0 Weakly correlated
293 HERVL18-int 6 n.s 43.0 Weakly correlated
294 HERVL74-int 6 * 99.0 Highly correlated
295 L1M6B 6 ** 99.0 Highly correlated
296 L1MCc 6 n.s 99.0 Highly correlated
297 L1MEb 6 n.s 99.0 Highly correlated
298 L1P3 6 n.s 74.0 Weakly correlated
299 L1P4a 6 n.s 74.0 Weakly correlated
300 L1PA8A 6 n.s 74.0 Weakly correlated
301 L4_B_Mam 6 n.s 99.0 Highly correlated
302 L5 6 * 99.0 Highly correlated
303 LTR16B2 6 n.s 99.0 Highly correlated
304 LTR18B 6 * 43.0 Weakly correlated
305 LTR18C 6 **** 43.0 Weakly correlated
306 LTR21A 6 **** 28.9 Weakly correlated
307 LTR3B 6 **** 28.9 Weakly correlated
308 LTR45B 6 ** 74.0 Weakly correlated
309 LTR79 6 n.s 99.0 Highly correlated
310 MER41C 6 n.s 74.0 Weakly correlated
311 MER49 6 n.s 43.0 Weakly correlated
312 MER52D 6 n.s 74.0 Weakly correlated
313 MER54B 6 * 87.0 Weakly correlated
314 MER74A 6 n.s 99.0 Highly correlated
315 MER88 6 **** 99.0 Highly correlated
316 MLT1A1 6 n.s 87.0 Weakly correlated
317 MLT1E3 6 n.s 99.0 Highly correlated
318 MLT1H1 6 n.s 99.0 Highly correlated
319 SVA_E 6 n.s 0.0 Weakly correlated
320 CR1-3_Croc 5 n.s 319.0 Weakly correlated
321 ERV24B_Prim-int 5 n.s 74.0 Weakly correlated
322 HERVE-int 5 n.s 19.6 Weakly correlated
323 L1M4a2 5 n.s 99.0 Highly correlated
324 L1M8 5 n.s 99.0 Highly correlated
325 L2-1_AMi 5 n.s 319.0 Weakly correlated
326 LTR15 5 * 28.9 Weakly correlated
327 LTR16D 5 n.s 99.0 Highly correlated
328 LTR37A 5 n.s 99.0 Highly correlated
329 LTR5_Hs 5 n.s 0.0 Weakly correlated
330 LTR81A 5 n.s 99.0 Highly correlated
331 LTR85c 5 n.s 99.0 Highly correlated
332 LTR8A 5 n.s 43.0 Weakly correlated
333 MER101-int 5 n.s 74.0 Weakly correlated
334 MER11C 5 n.s 19.6 Weakly correlated
335 MER21A 5 n.s 74.0 Weakly correlated
336 MER39B 5 n.s 74.0 Weakly correlated
337 MER41D 5 * 74.0 Weakly correlated
338 MER4A 5 n.s 74.0 Weakly correlated
339 MER4CL34 5 n.s 43.0 Weakly correlated
340 MER51A 5 n.s 43.0 Weakly correlated
341 MER51E 5 ** 43.0 Weakly correlated
342 MER57B2 5 n.s 43.0 Weakly correlated
343 MER61A 5 n.s 43.0 Weakly correlated
344 MER67B 5 n.s 99.0 Highly correlated
345 MER72 5 n.s 43.0 Weakly correlated
346 MER77 5 n.s 99.0 Highly correlated
347 MLT2A2 5 n.s 74.0 Weakly correlated
348 MamGypLTR1d 5 * 99.0 Highly correlated
349 MamGypsy2-LTR 5 ** 99.0 Highly correlated
350 PABL_A-int 5 n.s 74.0 Weakly correlated
351 SVA_F 5 n.s 0.0 Weakly correlated
352 X2_LINE 5 **** 319.0 Weakly correlated
353 X6A_LINE 5 * 99.0 Highly correlated
354 AluYg6 4 n.s 15.2 Weakly correlated
355 AluYi6 4 * 15.2 Weakly correlated
356 HERV3-int 4 n.s 28.9 Weakly correlated
357 HERVFH21-int 4 n.s 28.9 Weakly correlated
358 HERVI-int 4 n.s 28.9 Weakly correlated
359 L1M3c 4 n.s 99.0 Highly correlated
360 L1MA10 4 n.s 99.0 Highly correlated
361 L1PBa1 4 n.s 74.0 Weakly correlated
362 LOR1b 4 n.s 74.0 Weakly correlated
363 LTR101_Mam 4 n.s 99.0 Highly correlated
364 LTR14C 4 ** 28.9 Weakly correlated
365 LTR25 4 n.s 43.0 Weakly correlated
366 LTR33B 4 n.s 99.0 Highly correlated
367 LTR35A 4 *** 43.0 Weakly correlated
368 LTR37B 4 n.s 99.0 Highly correlated
369 LTR40b 4 n.s 99.0 Highly correlated
370 LTR43-int 4 * 74.0 Weakly correlated
371 LTR46 4 * 43.0 Weakly correlated
372 LTR48 4 n.s 74.0 Weakly correlated
373 LTR49-int 4 n.s 74.0 Weakly correlated
374 LTR54 4 n.s 74.0 Weakly correlated
375 LTR60B 4 * 74.0 Weakly correlated
376 LTR6A 4 n.s 28.9 Weakly correlated
377 LTR81B 4 n.s 99.0 Highly correlated
378 LTR89 4 n.s 99.0 Highly correlated
379 MER21B 4 n.s 99.0 Highly correlated
380 MER34D 4 * 74.0 Weakly correlated
381 MER4A1 4 n.s 74.0 Weakly correlated
382 MER4D1 4 n.s 74.0 Weakly correlated
383 MER57F 4 n.s 74.0 Weakly correlated
384 MER65-int 4 n.s 87.0 Weakly correlated
385 MER65A 4 n.s 74.0 Weakly correlated
386 MER66A 4 * 43.0 Weakly correlated
387 MER68B 4 n.s 99.0 Highly correlated
388 MER70A 4 n.s 87.0 Weakly correlated
389 MER90 4 n.s 99.0 Highly correlated
390 SVA_B 4 n.s 15.2 Weakly correlated
391 THE1D-int 4 n.s 28.9 Weakly correlated
392 AluYk2 3 n.s 19.6 Weakly correlated
393 AluYk4 3 n.s 15.2 Weakly correlated
394 ERVL-int 3 n.s 99.0 Highly correlated
395 HERV35I-int 3 n.s 43.0 Weakly correlated
396 HERVIP10F-int 3 n.s 28.9 Weakly correlated
397 HERVK13-int 3 * 19.6 Weakly correlated
398 HERVK9-int 3 n.s 28.9 Weakly correlated
399 HERVKC4-int 3 * 28.9 Weakly correlated
400 L1M2c 3 n.s 87.0 Weakly correlated
401 L1ME3D 3 n.s 99.0 Highly correlated
402 L1MEg2 3 n.s 99.0 Highly correlated
403 L1PB2 3 n.s 74.0 Weakly correlated
404 LTR06 3 ** 74.0 Weakly correlated
405 LTR103b_Mam 3 n.s 99.0 Highly correlated
406 LTR12F 3 n.s 28.9 Weakly correlated
407 LTR13A 3 n.s 28.9 Weakly correlated
408 LTR14 3 ** 28.9 Weakly correlated
409 LTR16B 3 n.s 99.0 Highly correlated
410 LTR16D1 3 * 99.0 Highly correlated
411 LTR19C 3 * 43.0 Weakly correlated
412 LTR22B 3 * 28.9 Weakly correlated
413 LTR22C0 3 ** 28.9 Weakly correlated
414 LTR24B 3 n.s 74.0 Weakly correlated
415 LTR27 3 * 43.0 Weakly correlated
416 LTR33C 3 n.s 99.0 Highly correlated
417 LTR36 3 n.s 74.0 Weakly correlated
418 LTR40c 3 n.s 99.0 Highly correlated
419 LTR47A2 3 * 74.0 Weakly correlated
420 LTR51 3 n.s 74.0 Weakly correlated
421 LTR54B 3 n.s 74.0 Weakly correlated
422 LTR57 3 n.s 74.0 Weakly correlated
423 LTR62 3 n.s 74.0 Weakly correlated
424 LTR75B 3 * 99.0 Highly correlated
425 LTR78B 3 n.s 99.0 Highly correlated
426 LTR81 3 * 99.0 Highly correlated
427 LTR9B 3 n.s 43.0 Weakly correlated
428 MER34 3 n.s 87.0 Weakly correlated
429 MER34A 3 n.s 99.0 Highly correlated
430 MER34A1 3 n.s 99.0 Highly correlated
431 MER34C2 3 n.s 74.0 Weakly correlated
432 MER41G 3 ** 74.0 Weakly correlated
433 MER50B 3 n.s 43.0 Weakly correlated
434 MER51-int 3 n.s 43.0 Weakly correlated
435 MER51B 3 n.s 43.0 Weakly correlated
436 MER57E1 3 n.s 87.0 Weakly correlated
437 MER61B 3 n.s 43.0 Weakly correlated
438 MER67D 3 n.s 99.0 Highly correlated
439 MER87B 3 * 74.0 Weakly correlated
440 MER92B 3 n.s 99.0 Highly correlated
441 MLT1B-int 3 n.s 99.0 Highly correlated
442 MLT1G3-int 3 n.s 99.0 Highly correlated
443 MLT1J1-int 3 n.s 99.0 Highly correlated
444 MLT2B1 3 n.s 99.0 Highly correlated
445 MLT2B5 3 n.s 87.0 Weakly correlated
446 MSTC 3 n.s 74.0 Weakly correlated
447 MamGypLTR1a 3 n.s 99.0 Highly correlated
448 MamGypLTR2c 3 n.s 99.0 Highly correlated
449 MamRep1151 3 n.s 99.0 Highly correlated
450 PrimLTR79 3 ** 74.0 Weakly correlated
451 X6B_LINE 3 n.s 99.0 Highly correlated
452 AluYa8 2 * 15.2 Weakly correlated
453 AluYc3 2 n.s 74.0 Weakly correlated
454 AluYh9 2 ** 15.2 Weakly correlated
455 AluYi6_4d 2 * 0.0 Weakly correlated
456 AluYk11 2 n.s 15.2 Weakly correlated
457 AmnSINE2 2 n.s 319.0 Weakly correlated
458 ERV3-16A3_LTR 2 n.s 99.0 Highly correlated
459 ERVL47-int 2 n.s 74.0 Weakly correlated
460 HERV16-int 2 n.s 99.0 Highly correlated
461 HERV1_LTRe 2 *** 43.0 Weakly correlated
462 HERV9N-int 2 n.s 19.6 Weakly correlated
463 HERV9NC-int 2 n.s 19.6 Weakly correlated
464 HERVL-int 2 n.s 74.0 Weakly correlated
465 HUERS-P1-int 2 n.s 43.0 Weakly correlated
466 Harlequin-int 2 n.s 74.0 Weakly correlated
467 L1M 2 n.s 74.0 Weakly correlated
468 L1M2a 2 n.s 87.0 Weakly correlated
469 L1M2b 2 n.s 87.0 Weakly correlated
470 L1M7 2 n.s 99.0 Highly correlated
471 L1ME3C 2 n.s 99.0 Highly correlated
472 L1PBb 2 n.s 74.0 Weakly correlated
473 LTR10C 2 n.s 28.9 Weakly correlated
474 LTR16E1 2 n.s 99.0 Highly correlated
475 LTR22A 2 n.s 43.0 Weakly correlated
476 LTR24 2 n.s 74.0 Weakly correlated
477 LTR24C 2 n.s 74.0 Weakly correlated
478 LTR26D 2 n.s 0.0 Weakly correlated
479 LTR2752 2 n.s 43.0 Weakly correlated
480 LTR2C 2 n.s 19.6 Weakly correlated
481 LTR32 2 n.s 43.0 Weakly correlated
482 LTR37-int 2 n.s 99.0 Highly correlated
483 LTR3B_ 2 n.s 28.9 Weakly correlated
484 LTR40A1 2 n.s 99.0 Highly correlated
485 LTR52 2 n.s 99.0 Highly correlated
486 LTR53 2 n.s 99.0 Highly correlated
487 LTR5B 2 n.s 28.9 Weakly correlated
488 LTR60 2 *** 43.0 Weakly correlated
489 LTR61 2 n.s 43.0 Weakly correlated
490 LTR64 2 n.s 74.0 Weakly correlated
491 LTR68 2 n.s 99.0 Highly correlated
492 LTR71A 2 n.s 43.0 Weakly correlated
493 LTR75 2 n.s 99.0 Highly correlated
494 LTR75_1 2 * 99.0 Highly correlated
495 LTR7B 2 n.s 28.9 Weakly correlated
496 LTR82B 2 n.s 99.0 Highly correlated
497 MER110 2 n.s 99.0 Highly correlated
498 MER21-int 2 n.s 99.0 Highly correlated
499 MER34C_ 2 n.s 87.0 Weakly correlated
500 MER41E 2 n.s 74.0 Weakly correlated
501 MER4E 2 n.s 74.0 Weakly correlated
502 MER50C 2 * 43.0 Weakly correlated
503 MER51C 2 n.s 43.0 Weakly correlated
504 MER52C 2 n.s 74.0 Weakly correlated
505 MER57A-int 2 n.s 43.0 Weakly correlated
506 MER57C2 2 n.s 87.0 Weakly correlated
507 MER61D 2 n.s 43.0 Weakly correlated
508 MER61F 2 n.s 43.0 Weakly correlated
509 MER65D 2 n.s 87.0 Weakly correlated
510 MER68-int 2 n.s 99.0 Highly correlated
511 MER73 2 n.s 87.0 Weakly correlated
512 MER90a 2 n.s 99.0 Highly correlated
513 MER92C 2 * 99.0 Highly correlated
514 MLT1C-int 2 n.s 94.0 Weakly correlated
515 MLT1G-int 2 n.s 99.0 Highly correlated
516 MSTB2 2 n.s 74.0 Weakly correlated
517 MamGypLTR1b 2 n.s 99.0 Highly correlated
518 MamGypLTR1c 2 n.s 99.0 Highly correlated
519 MamGypLTR2b 2 n.s 99.0 Highly correlated
520 MamRep1527 2 n.s 99.0 Highly correlated
521 Mam_R4 2 n.s 99.0 Highly correlated
522 THE1A 2 n.s 43.0 Weakly correlated
523 THE1C-int 2 n.s 43.0 Weakly correlated
524 UCON86 2 *** 319.0 Weakly correlated
525 X7C_LINE 2 n.s 319.0 Weakly correlated
526 AluYb9 1 n.s 15.2 Weakly correlated
527 AluYe6 1 n.s 74.0 Weakly correlated
528 AluYk12 1 n.s 15.2 Weakly correlated
529 HERV15-int 1 n.s 28.9 Weakly correlated
530 HERV30-int 1 n.s 28.9 Weakly correlated
531 HERVK11-int 1 n.s 28.9 Weakly correlated
532 HERVK14C-int 1 n.s 28.9 Weakly correlated
533 HERVK22-int 1 n.s 43.0 Weakly correlated
534 HERVP71A-int 1 n.s 43.0 Weakly correlated
535 HERVS71-int 1 n.s 28.9 Weakly correlated
536 L1M3d 1 n.s 99.0 Highly correlated
537 L1MCb 1 n.s 99.0 Highly correlated
538 L1MEa 1 n.s 99.0 Highly correlated
539 L1P4d 1 n.s 74.0 Weakly correlated
540 L1PB 1 n.s 74.0 Weakly correlated
541 LTR106_Mam 1 n.s 99.0 Highly correlated
542 LTR107_Mam 1 n.s 99.0 Highly correlated
543 LTR10B 1 n.s 28.9 Weakly correlated
544 LTR10E 1 n.s 28.9 Weakly correlated
545 LTR10G 1 n.s 28.9 Weakly correlated
546 LTR12D 1 n.s 19.6 Weakly correlated
547 LTR16B1 1 n.s 99.0 Highly correlated
548 LTR16E2 1 n.s 99.0 Highly correlated
549 LTR1A1 1 n.s 43.0 Weakly correlated
550 LTR2 1 n.s 28.9 Weakly correlated
551 LTR26B 1 n.s 74.0 Weakly correlated
552 LTR26C 1 n.s 0.0 Weakly correlated
553 LTR27D 1 n.s 43.0 Weakly correlated
554 LTR27E 1 n.s 43.0 Weakly correlated
555 LTR28C 1 n.s 43.0 Weakly correlated
556 LTR2B 1 n.s 19.6 Weakly correlated
557 LTR3 1 n.s 28.9 Weakly correlated
558 LTR39 1 n.s 43.0 Weakly correlated
559 LTR3A 1 n.s 28.9 Weakly correlated
560 LTR45C 1 n.s 99.0 Highly correlated
561 LTR47A 1 n.s 74.0 Weakly correlated
562 LTR47B4 1 n.s 74.0 Weakly correlated
563 LTR56 1 n.s 74.0 Weakly correlated
564 LTR72B 1 n.s 74.0 Weakly correlated
565 LTR7Y 1 n.s 8.6 Weakly correlated
566 LTR81C 1 n.s 99.0 Highly correlated
567 LTR84b 1 n.s 99.0 Highly correlated
568 LTR86A2 1 n.s 99.0 Highly correlated
569 LTR87 1 n.s 99.0 Highly correlated
570 LTR9D 1 n.s 43.0 Weakly correlated
571 MER101 1 n.s 74.0 Weakly correlated
572 MER101B 1 n.s 87.0 Weakly correlated
573 MER110A 1 n.s 99.0 Highly correlated
574 MER31-int 1 n.s 99.0 Highly correlated
575 MER31A 1 n.s 87.0 Weakly correlated
576 MER48 1 n.s 28.9 Weakly correlated
577 MER4D0 1 n.s 74.0 Weakly correlated
578 MER57A1 1 n.s 43.0 Weakly correlated
579 MER57B1 1 n.s 43.0 Weakly correlated
580 MER57D 1 n.s 87.0 Weakly correlated
581 MER66D 1 n.s 43.0 Weakly correlated
582 MER67A 1 n.s 99.0 Highly correlated
583 MER70B 1 n.s 87.0 Weakly correlated
584 MER72B 1 n.s 43.0 Weakly correlated
585 MER83A-int 1 n.s 99.0 Highly correlated
586 MER83B-int 1 n.s 99.0 Highly correlated
587 MER84 1 n.s 43.0 Weakly correlated
588 MER87 1 n.s 43.0 Weakly correlated
589 MER9a1 1 n.s 19.6 Weakly correlated
590 MER9a2 1 n.s 19.6 Weakly correlated
591 MER9a3 1 n.s 28.9 Weakly correlated
592 MLT1-int 1 n.s 99.0 Highly correlated
593 MLT1A-int 1 n.s 99.0 Highly correlated
594 MLT1A1-int 1 n.s 87.0 Weakly correlated
595 MLT1D-int 1 n.s 99.0 Highly correlated
596 MLT1E1 1 n.s 99.0 Highly correlated
597 MLT1F1-int 1 n.s 99.0 Highly correlated
598 MLT1I-int 1 n.s 99.0 Highly correlated
599 MLT1J-int 1 n.s 99.0 Highly correlated
600 MLT1J2-int 1 n.s 99.0 Highly correlated
601 MLT2E 1 n.s 99.0 Highly correlated
602 MSTB-int 1 n.s 43.0 Weakly correlated
603 PABL_A 1 n.s 43.0 Weakly correlated
604 PABL_B 1 n.s 43.0 Weakly correlated
605 PRIMA4_LTR 1 n.s 74.0 Weakly correlated
606 SVA_C 1 n.s 15.2 Weakly correlated
607 THE1A-int 1 n.s 43.0 Weakly correlated
608 UCON51 1 ** 319.0 Weakly correlated
609 X8_LINE 1 n.s 319.0 Weakly correlated
610 X9_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluJb 225 n.s 74.0 Weakly correlated
2 AluJo 154 n.s 74.0 Weakly correlated
3 AluJr 125 n.s 74.0 Weakly correlated
4 AluY 34 n.s 74.0 Weakly correlated
5 AluSz 32 n.s 74.0 Weakly correlated
6 L1M5 31 n.s 99.0 Highly correlated
7 MIRb 29 n.s 99.0 Highly correlated
8 L1MA3 28 n.s 74.0 Weakly correlated
9 L1M4 27 n.s 99.0 Highly correlated
10 L2c 26 n.s 99.0 Highly correlated
11 L1M2 26 n.s 99.0 Highly correlated
12 FLAM_C 25 n.s 74.0 Weakly correlated
13 L2a 24 n.s 99.0 Highly correlated
14 AluSx 24 n.s 74.0 Weakly correlated
15 AluSx1 22 n.s 74.0 Weakly correlated
16 L1M3 21 n.s 99.0 Highly correlated
17 AluJr4 19 n.s 74.0 Weakly correlated
18 L1MB3 19 n.s 99.0 Highly correlated
19 L2 18 n.s 99.0 Highly correlated
20 L2b 16 n.s 99.0 Highly correlated
21 L1M1 16 n.s 74.0 Weakly correlated
22 AluSg7 15 n.s 74.0 Weakly correlated
23 L1PREC2 14 n.s 43.0 Weakly correlated
24 L1MA1 14 n.s 74.0 Weakly correlated
25 L1MD 14 n.s 99.0 Highly correlated
26 L1MB8 13 n.s 99.0 Highly correlated
27 AluSc 13 n.s 74.0 Weakly correlated
28 L1PA6 13 n.s 28.9 Weakly correlated
29 MIR3 13 n.s 99.0 Highly correlated
30 AluSz6 13 n.s 74.0 Weakly correlated
31 FRAM 13 n.s 74.0 Weakly correlated
32 MIR 12 n.s 99.0 Highly correlated
33 L1ME1 12 n.s 99.0 Highly correlated
34 L1PA7 12 n.s 74.0 Weakly correlated
35 L1MA2 12 n.s 74.0 Weakly correlated
36 L1MA4 11 n.s 87.0 Weakly correlated
37 FLAM_A 11 n.s 74.0 Weakly correlated
38 L1MB2 11 n.s 99.0 Highly correlated
39 AluSx3 11 n.s 74.0 Weakly correlated
40 L1MB7 11 n.s 99.0 Highly correlated
41 L1MA5A 11 n.s 87.0 Weakly correlated
42 L1PA13 11 n.s 74.0 Weakly correlated
43 L1MA9 10 n.s 99.0 Highly correlated
44 L1MB4 10 n.s 99.0 Highly correlated
45 AluSp 10 n.s 74.0 Weakly correlated
46 AluSq2 10 n.s 74.0 Weakly correlated
47 L3 10 n.s 99.0 Highly correlated
48 L1PA3 10 n.s 19.6 Weakly correlated
49 L1MA4A 10 n.s 87.0 Weakly correlated
50 L1MB5 9 n.s 99.0 Highly correlated
51 MIRc 9 n.s 99.0 Highly correlated
52 L1PA11 9 n.s 74.0 Weakly correlated
53 L1MC4 8 n.s 99.0 Highly correlated
54 L1PA8 8 n.s 74.0 Weakly correlated
55 L1MEd 8 n.s 99.0 Highly correlated
56 L1PA15 8 n.s 74.0 Weakly correlated
57 L1PA5 8 n.s 19.6 Weakly correlated
58 MLT1J 8 n.s 99.0 Highly correlated
59 L1M4c 8 n.s 99.0 Highly correlated
60 L1MD2 7 n.s 99.0 Highly correlated
61 L1MEf 7 n.s 99.0 Highly correlated
62 AluSc8 7 n.s 74.0 Weakly correlated
63 L1MA8 7 n.s 87.0 Weakly correlated
64 L1P4 7 n.s 74.0 Weakly correlated
65 L1PB4 6 n.s 99.0 Highly correlated
66 AluSg4 6 n.s 74.0 Weakly correlated
67 L1PA17 6 n.s 74.0 Weakly correlated
68 L1ME4b 6 n.s 99.0 Highly correlated
69 L1MA5 6 n.s 87.0 Weakly correlated
70 LTR76 6 ** 74.0 Weakly correlated
71 AluSg 6 n.s 74.0 Weakly correlated
72 L1MEc 6 n.s 99.0 Highly correlated
73 L1PA4 6 n.s 19.6 Weakly correlated
74 MLT1L 6 n.s 99.0 Highly correlated
75 MER21C 5 n.s 99.0 Highly correlated
76 L1ME4a 5 n.s 99.0 Highly correlated
77 L1MB1 5 n.s 99.0 Highly correlated
78 L1PA16 5 n.s 74.0 Weakly correlated
79 MLT1H 5 n.s 99.0 Highly correlated
80 L1MC 4 n.s 99.0 Highly correlated
81 L1ME2 4 n.s 99.0 Highly correlated
82 L1ME3A 4 n.s 99.0 Highly correlated
83 L1PB3 4 n.s 74.0 Weakly correlated
84 L1MA6 4 n.s 87.0 Weakly correlated
85 MLT1K 4 n.s 99.0 Highly correlated
86 L1ME5 4 n.s 99.0 Highly correlated
87 MER50 4 n.s 43.0 Weakly correlated
88 MLT1F 4 n.s 99.0 Highly correlated
89 MLT1G 4 n.s 99.0 Highly correlated
90 L1MD1 4 n.s 99.0 Highly correlated
91 L1ME3Cz 4 n.s 99.0 Highly correlated
92 AluSx4 4 n.s 74.0 Weakly correlated
93 L1M4b 4 n.s 99.0 Highly correlated
94 L1MA7 4 n.s 87.0 Weakly correlated
95 LTR85a 4 n.s 99.0 Highly correlated
96 LTR8B 3 n.s 43.0 Weakly correlated
97 MLT1N2 3 n.s 99.0 Highly correlated
98 L1PA2 3 n.s 15.2 Weakly correlated
99 LTR21A 3 ** 28.9 Weakly correlated
100 MLT1F1 3 n.s 99.0 Highly correlated
101 L1PA8A 3 n.s 74.0 Weakly correlated
102 SVA_A 3 n.s 19.6 Weakly correlated
103 L1MD3 3 n.s 99.0 Highly correlated
104 MLT1H2 3 n.s 99.0 Highly correlated
105 L1M3c 2 n.s 99.0 Highly correlated
106 L1PA14 2 n.s 74.0 Weakly correlated
107 L1PB1 2 n.s 74.0 Weakly correlated
108 LTR33 2 n.s 99.0 Highly correlated
109 LTR88c 2 n.s 99.0 Highly correlated
110 MER34C_ 2 n.s 87.0 Weakly correlated
111 L1PA10 2 n.s 74.0 Weakly correlated
112 LTR78B 2 n.s 99.0 Highly correlated
113 MSTB1 2 n.s 74.0 Weakly correlated
114 HUERS-P3-int 2 n.s 43.0 Weakly correlated
115 L1MEg 2 n.s 99.0 Highly correlated
116 MER74A 2 n.s 99.0 Highly correlated
117 MLT1B 2 n.s 99.0 Highly correlated
118 MamRTE1 2 n.s 99.0 Highly correlated
119 MamSINE1 2 n.s 99.0 Highly correlated
120 AluSc5 2 n.s 74.0 Weakly correlated
121 HAL1 2 n.s 99.0 Highly correlated
122 LTR13 2 n.s 19.6 Weakly correlated
123 LTR14B 2 n.s 28.9 Weakly correlated
124 LTR19B 2 n.s 43.0 Weakly correlated
125 LTR9 2 n.s 43.0 Weakly correlated
126 MLT1C 2 n.s 94.0 Weakly correlated
127 MLT1I 2 n.s 99.0 Highly correlated
128 L1MC3 2 n.s 99.0 Highly correlated
129 L1ME3F 2 n.s 99.0 Highly correlated
130 LTR16A2 2 n.s 99.0 Highly correlated
131 LTR40a 2 n.s 99.0 Highly correlated
132 LTR50 2 n.s 99.0 Highly correlated
133 L1ME3E 2 n.s 99.0 Highly correlated
134 MLT1J2 2 n.s 99.0 Highly correlated
135 AluYf1 2 n.s 19.6 Weakly correlated
136 L1M3f 2 n.s 87.0 Weakly correlated
137 LTR85b 2 n.s 99.0 Highly correlated
138 ERV3-16A3_I-int 2 n.s 99.0 Highly correlated
139 L1ME2z 2 n.s 99.0 Highly correlated
140 MER52A 2 n.s 74.0 Weakly correlated
141 ERV24_Prim-int 1 n.s 74.0 Weakly correlated
142 ERVL-E-int 1 n.s 99.0 Highly correlated
143 L1MEb 1 n.s 99.0 Highly correlated
144 L1P1 1 n.s 19.6 Weakly correlated
145 L3b 1 n.s 99.0 Highly correlated
146 LOR1b 1 n.s 74.0 Weakly correlated
147 LTR10A 1 n.s 28.9 Weakly correlated
148 LTR16B2 1 n.s 99.0 Highly correlated
149 LTR41C 1 n.s 99.0 Highly correlated
150 MER41G 1 n.s 74.0 Weakly correlated
151 MLT1D 1 n.s 99.0 Highly correlated
152 MSTB2 1 n.s 74.0 Weakly correlated
153 SVA_E 1 n.s 0.0 Weakly correlated
154 AluYe6 1 n.s 74.0 Weakly correlated
155 AluYh3 1 n.s 15.2 Weakly correlated
156 HERVH48-int 1 n.s 28.9 Weakly correlated
157 L1ME3B 1 n.s 99.0 Highly correlated
158 L1ME3G 1 n.s 99.0 Highly correlated
159 L1P3 1 n.s 74.0 Weakly correlated
160 LTR35A 1 n.s 43.0 Weakly correlated
161 LTR8 1 n.s 43.0 Weakly correlated
162 LTR81A 1 n.s 99.0 Highly correlated
163 MER4D 1 n.s 74.0 Weakly correlated
164 MER4D1 1 n.s 74.0 Weakly correlated
165 MER57D 1 n.s 87.0 Weakly correlated
166 MER77 1 n.s 99.0 Highly correlated
167 L1ME3 1 n.s 99.0 Highly correlated
168 L1PA12 1 n.s 74.0 Weakly correlated
169 L1PB 1 n.s 74.0 Weakly correlated
170 L1PBa1 1 n.s 74.0 Weakly correlated
171 LTR25-int 1 n.s 43.0 Weakly correlated
172 LTR54B 1 n.s 74.0 Weakly correlated
173 LTR78 1 n.s 99.0 Highly correlated
174 LTR88b 1 n.s 99.0 Highly correlated
175 MER34 1 n.s 87.0 Weakly correlated
176 MER76 1 n.s 99.0 Highly correlated
177 MLT1A 1 n.s 99.0 Highly correlated
178 MLT1E1A 1 n.s 99.0 Highly correlated
179 X7A_LINE 1 n.s 319.0 Weakly correlated
180 AluYc 1 n.s 74.0 Weakly correlated
181 HERV4_I-int 1 n.s 43.0 Weakly correlated
182 HERVK-int 1 n.s 28.9 Weakly correlated
183 L1MA10 1 n.s 99.0 Highly correlated
184 L1MC5a 1 n.s 99.0 Highly correlated
185 L1MDa 1 n.s 99.0 Highly correlated
186 L1MDb 1 n.s 99.0 Highly correlated
187 L1ME3C 1 n.s 99.0 Highly correlated
188 MER34D 1 n.s 74.0 Weakly correlated
189 MLT1F2 1 n.s 99.0 Highly correlated
190 THE1B 1 n.s 43.0 Weakly correlated
191 AluSq 1 n.s 74.0 Weakly correlated
192 AluYi6_4d 1 n.s 0.0 Weakly correlated
193 ERVL-int 1 n.s 99.0 Highly correlated
194 HERVK13-int 1 n.s 19.6 Weakly correlated
195 HERVL40-int 1 n.s 99.0 Highly correlated
196 L1M6 1 n.s 99.0 Highly correlated
197 LTR41B 1 n.s 99.0 Highly correlated
198 LTR67B 1 n.s 99.0 Highly correlated
199 LTR71B 1 n.s 43.0 Weakly correlated
200 MER4B-int 1 n.s 99.0 Highly correlated
201 MER52-int 1 n.s 99.0 Highly correlated
202 MSTD 1 n.s 74.0 Weakly correlated
203 MamGypLTR3 1 n.s 99.0 Highly correlated
204 Plat_L3 1 n.s 99.0 Highly correlated
205 AluSq10 1 n.s 74.0 Weakly correlated
206 AluYk3 1 n.s 19.6 Weakly correlated
207 L1M2c 1 n.s 87.0 Weakly correlated
208 L1MEi 1 n.s 99.0 Highly correlated
209 LTR27D 1 n.s 43.0 Weakly correlated
210 THE1C 1 n.s 43.0 Weakly correlated
211 AluYe5 1 n.s 74.0 Weakly correlated
212 FAM 1 n.s 87.0 Weakly correlated
213 HAL1ME 1 n.s 99.0 Highly correlated
214 L1M3d 1 n.s 99.0 Highly correlated
215 L1P2 1 n.s 28.9 Weakly correlated
216 LTR72 1 n.s 74.0 Weakly correlated
217 MER68B 1 n.s 99.0 Highly correlated
218 MamGypLTR3a 1 n.s 99.0 Highly correlated
219 AluYm1 1 n.s 19.6 Weakly correlated
220 Harlequin-int 1 n.s 74.0 Weakly correlated
221 L1M3e 1 n.s 99.0 Highly correlated
222 L1MC5 1 n.s 99.0 Highly correlated
223 LTR18A 1 n.s 43.0 Weakly correlated
224 LTR22B 1 n.s 28.9 Weakly correlated
225 LTR49-int 1 n.s 74.0 Weakly correlated
226 LTR75B 1 n.s 99.0 Highly correlated
227 LTR7B 1 n.s 28.9 Weakly correlated
228 LTR7C 1 n.s 28.9 Weakly correlated
229 MER41A 1 n.s 74.0 Weakly correlated
230 MER61A 1 n.s 43.0 Weakly correlated
231 MLT2B4 1 n.s 99.0 Highly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUSC 74.0 Weakly correlated
2 ALUY 74.0 Weakly correlated
3 L1M4C 99.0 Highly correlated
4 L1ME1 99.0 Highly correlated
5 L1PA3 19.6 Weakly correlated
6 L1PA4 19.6 Weakly correlated
7 L1PA5 19.6 Weakly correlated
8 L1PA7 74.0 Weakly correlated
9 L2 99.0 Highly correlated
10 LTR76 74.0 Weakly correlated
11 MIRB 99.0 Highly correlated