ZRdb KZFP & Repeats
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Human_ZFP69

  • Protein
    Zinc finger protein 69 homolog
  • Length
    526
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    99.0 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MPQQLLITLPTEASTWVKLQHPKKAVEGAPLWEDVTKMFEGEALLSQDAEDVKTQRESLEDEVTPGLPTAESQELLTFKDISIDFTQEEWGQLAPAHQNLYREVMLENYSNLVSVGYQLSKPSVISQLEKGEEPWMAEKEGPGDPSSDLKSKIETIESTAKSTISQERLYHGIMMESFMRDDIIYSTLRKVSTYDDVLERHQETCMRDVRQAILTHKKRVQETNKFGENIIVHSNVIIEQRHHKYDTPTKRNTYKLDLINHPTSYIRTKTYECNICEKIFKQPIHLTEHMRIHTGEKPFRCKECGRAFSQSASLSTHQRIHTGEKPFECEECGKAFRHRSSLNQHHRTHTGEKPYVCDKCQKAFSQNISLVQHLRTHSGEKPFTCNECGKTFRQIRHLSEHIRIHTGEKPYACTACCKTFSHRAYLTHHQRIHTGERPYKCKECGKAFRQRIHLSNHKTVHTGVKAYECNRCGKAYRHDSSFKKHQRHHTGEKPYECNECGKAFSYNSSLSRHHEIHRRNAFRNKV
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
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# Domain name Pos
1 scan 1..39
2 KRAB 76..147
3 C2h2 271..293
4 C2h2 299..321
5 C2h2 327..349
6 C2h2 355..377
7 C2h2 383..405
8 C2h2 411..433
9 C2h2 439..461
10 C2h2 467..489
11 C2h2 495..517
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific
4 Molecular Function metal ion binding
5 Molecular Function RNA polymerase II transcription regulatory region sequence-specific DNA binding
6 Biological Process lipid metabolic process
7 Biological Process negative regulation of transcription by RNA polymerase II
8 Biological Process regulation of lipid metabolic process
9 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1M5 72 **** 99.0 Highly correlated
2 L1ME4b 71 **** 99.0 Highly correlated
3 L1MC1 60 **** 99.0 Highly correlated
4 L1M4 50 **** 99.0 Highly correlated
5 L1ME1 46 **** 99.0 Highly correlated
6 L1MB7 41 **** 99.0 Highly correlated
7 L2a 28 n.s 99.0 Highly correlated
8 L1MC 25 **** 99.0 Highly correlated
9 L1MEc 25 **** 99.0 Highly correlated
10 AluJb 23 n.s 74.0 Weakly correlated
11 AluSx1 22 n.s 74.0 Weakly correlated
12 L1MB8 22 **** 99.0 Highly correlated
13 L1ME4a 22 **** 99.0 Highly correlated
14 L1MD 20 **** 99.0 Highly correlated
15 AluY 18 n.s 74.0 Weakly correlated
16 AluSx 17 n.s 74.0 Weakly correlated
17 L1MC2 17 **** 99.0 Highly correlated
18 AluSz 16 n.s 74.0 Weakly correlated
19 AluSq2 15 * 74.0 Weakly correlated
20 L1MD1 15 **** 99.0 Highly correlated
21 L1ME3B 15 **** 99.0 Highly correlated
22 L1ME3G 15 **** 99.0 Highly correlated
23 MLT1D 15 **** 99.0 Highly correlated
24 AluSp 14 * 74.0 Weakly correlated
25 AluSz6 14 ** 74.0 Weakly correlated
26 L1MC5a 14 **** 99.0 Highly correlated
27 L1ME3Cz 14 **** 99.0 Highly correlated
28 L2c 14 n.s 99.0 Highly correlated
29 MIRb 14 n.s 99.0 Highly correlated
30 L1MCa 12 **** 99.0 Highly correlated
31 L1ME4c 12 **** 99.0 Highly correlated
32 L1MEd 12 *** 99.0 Highly correlated
33 MLT1C 12 **** 94.0 Weakly correlated
34 AluSg 11 * 74.0 Weakly correlated
35 L1ME2 11 **** 99.0 Highly correlated
36 AluJo 10 n.s 74.0 Weakly correlated
37 AluJr 10 n.s 74.0 Weakly correlated
38 L2b 10 n.s 99.0 Highly correlated
39 L1ME3A 9 ** 99.0 Highly correlated
40 L1MB5 8 *** 99.0 Highly correlated
41 L1MC4 8 * 99.0 Highly correlated
42 L1MC4a 8 *** 99.0 Highly correlated
43 L1ME3F 8 **** 99.0 Highly correlated
44 LTR8B 8 **** 43.0 Weakly correlated
45 AluJr4 7 ** 74.0 Weakly correlated
46 FLAM_C 7 *** 74.0 Weakly correlated
47 L1MD2 7 ** 99.0 Highly correlated
48 L1MDa 7 ** 99.0 Highly correlated
49 L3 7 n.s 99.0 Highly correlated
50 AluSc8 6 n.s 74.0 Weakly correlated
51 L1ME3 6 ** 99.0 Highly correlated
52 LTR8 6 **** 43.0 Weakly correlated
53 L1M1 5 n.s 74.0 Weakly correlated
54 L1M2 5 n.s 99.0 Highly correlated
55 L1M3 5 ** 99.0 Highly correlated
56 L1MC3 5 n.s 99.0 Highly correlated
57 L1ME3C 5 **** 99.0 Highly correlated
58 L1PA5 5 n.s 19.6 Weakly correlated
59 AluSc 4 n.s 74.0 Weakly correlated
60 AluSx3 4 n.s 74.0 Weakly correlated
61 AluYm1 4 ** 19.6 Weakly correlated
62 L1MA3 4 n.s 74.0 Weakly correlated
63 L1MA4A 4 n.s 87.0 Weakly correlated
64 L1MA9 4 n.s 99.0 Highly correlated
65 L1MB4 4 n.s 99.0 Highly correlated
66 L1MD3 4 ** 99.0 Highly correlated
67 L1ME3D 4 ** 99.0 Highly correlated
68 L1MEf 4 n.s 99.0 Highly correlated
69 L1PA8A 4 * 74.0 Weakly correlated
70 L2 4 n.s 99.0 Highly correlated
71 LTR8A 4 **** 43.0 Weakly correlated
72 MER21-int 4 **** 99.0 Highly correlated
73 MIR 4 n.s 99.0 Highly correlated
74 MIR3 4 n.s 99.0 Highly correlated
75 MIRc 4 n.s 99.0 Highly correlated
76 AluSc5 3 * 74.0 Weakly correlated
77 AluYc 3 ** 74.0 Weakly correlated
78 HAL1 3 n.s 99.0 Highly correlated
79 L1M4b 3 * 99.0 Highly correlated
80 L1M6 3 * 99.0 Highly correlated
81 L1MB3 3 n.s 99.0 Highly correlated
82 L1MEg 3 n.s 99.0 Highly correlated
83 L1P3 3 n.s 74.0 Weakly correlated
84 LTR10A 3 **** 28.9 Weakly correlated
85 LTR67B 3 *** 99.0 Highly correlated
86 MLT1A0 3 n.s 99.0 Highly correlated
87 MLT1B 3 n.s 99.0 Highly correlated
88 MLT1I 3 * 99.0 Highly correlated
89 MLT1J 3 n.s 99.0 Highly correlated
90 MLT1K 3 n.s 99.0 Highly correlated
91 MLT1N2 3 ** 99.0 Highly correlated
92 THE1B 3 n.s 43.0 Weakly correlated
93 AluSg7 2 n.s 74.0 Weakly correlated
94 AluSx4 2 n.s 74.0 Weakly correlated
95 FAM 2 ** 87.0 Weakly correlated
96 FLAM_A 2 n.s 74.0 Weakly correlated
97 FRAM 2 * 74.0 Weakly correlated
98 HERVE-int 2 ** 19.6 Weakly correlated
99 HERVE_a-int 2 *** 28.9 Weakly correlated
100 HERVK-int 2 ** 28.9 Weakly correlated
101 L1M4a1 2 * 99.0 Highly correlated
102 L1MA2 2 n.s 74.0 Weakly correlated
103 L1MA4 2 n.s 87.0 Weakly correlated
104 L1MA6 2 n.s 87.0 Weakly correlated
105 L1MB1 2 n.s 99.0 Highly correlated
106 L1P1 2 n.s 19.6 Weakly correlated
107 L1P4 2 n.s 74.0 Weakly correlated
108 L1PA3 2 n.s 19.6 Weakly correlated
109 L1PA4 2 n.s 19.6 Weakly correlated
110 LTR16D1 2 **** 99.0 Highly correlated
111 LTR37B 2 ** 99.0 Highly correlated
112 MER21B 2 * 99.0 Highly correlated
113 MER21C 2 n.s 99.0 Highly correlated
114 MER50 2 * 43.0 Weakly correlated
115 MER50-int 2 ** 43.0 Weakly correlated
116 MLT1F 2 * 99.0 Highly correlated
117 MLT1G1 2 * 99.0 Highly correlated
118 MLT1G3 2 * 99.0 Highly correlated
119 MLT1J1-int 2 *** 99.0 Highly correlated
120 MLT1J2 2 * 99.0 Highly correlated
121 MamRTE1 2 * 99.0 Highly correlated
122 THE1A 2 * 43.0 Weakly correlated
123 THE1D 2 n.s 43.0 Weakly correlated
124 AluSg4 1 n.s 74.0 Weakly correlated
125 AluSq 1 n.s 74.0 Weakly correlated
126 AluSq4 1 * 74.0 Weakly correlated
127 AluYa5 1 n.s 15.2 Weakly correlated
128 AluYa8 1 *** 15.2 Weakly correlated
129 AluYb8 1 n.s 15.2 Weakly correlated
130 AluYh3 1 * 15.2 Weakly correlated
131 AluYh3a3 1 *** 15.2 Weakly correlated
132 AluYi6 1 ** 15.2 Weakly correlated
133 AluYj4 1 n.s 0.0 Weakly correlated
134 HERVK13-int 1 *** 19.6 Weakly correlated
135 HERVK9-int 1 n.s 28.9 Weakly correlated
136 HERVL32-int 1 *** 43.0 Weakly correlated
137 HERVL40-int 1 * 99.0 Highly correlated
138 HUERS-P1-int 1 * 43.0 Weakly correlated
139 L1M3b 1 * 99.0 Highly correlated
140 L1M4c 1 n.s 99.0 Highly correlated
141 L1MA5A 1 n.s 87.0 Weakly correlated
142 L1MA7 1 n.s 87.0 Weakly correlated
143 L1MA8 1 n.s 87.0 Weakly correlated
144 L1MC5 1 n.s 99.0 Highly correlated
145 L1MCb 1 n.s 99.0 Highly correlated
146 L1MDb 1 * 99.0 Highly correlated
147 L1ME2z 1 n.s 99.0 Highly correlated
148 L1ME3E 1 n.s 99.0 Highly correlated
149 L1MEj 1 n.s 99.0 Highly correlated
150 L1PA13 1 n.s 74.0 Weakly correlated
151 L1PA15 1 n.s 74.0 Weakly correlated
152 L1PA2 1 n.s 15.2 Weakly correlated
153 L1PA6 1 n.s 28.9 Weakly correlated
154 L1PB 1 n.s 74.0 Weakly correlated
155 L1PB1 1 n.s 74.0 Weakly correlated
156 L1PBa 1 n.s 74.0 Weakly correlated
157 L1PREC2 1 n.s 43.0 Weakly correlated
158 L3b 1 n.s 99.0 Highly correlated
159 L4_B_Mam 1 n.s 99.0 Highly correlated
160 L4_C_Mam 1 n.s 99.0 Highly correlated
161 LTR104_Mam 1 * 99.0 Highly correlated
162 LTR10B1 1 *** 28.9 Weakly correlated
163 LTR13 1 * 19.6 Weakly correlated
164 LTR14 1 *** 28.9 Weakly correlated
165 LTR16A 1 n.s 99.0 Highly correlated
166 LTR16A1 1 n.s 99.0 Highly correlated
167 LTR33 1 n.s 99.0 Highly correlated
168 LTR33A 1 * 99.0 Highly correlated
169 LTR39 1 * 43.0 Weakly correlated
170 LTR40c 1 ** 99.0 Highly correlated
171 LTR42 1 ** 74.0 Weakly correlated
172 LTR50 1 n.s 99.0 Highly correlated
173 LTR53 1 ** 99.0 Highly correlated
174 LTR7 1 n.s 19.6 Weakly correlated
175 LTR81A 1 ** 99.0 Highly correlated
176 LTR82A 1 * 99.0 Highly correlated
177 LTR85c 1 ** 99.0 Highly correlated
178 LTR87 1 ** 99.0 Highly correlated
179 LTR9A1 1 ** 43.0 Weakly correlated
180 MER11C 1 n.s 19.6 Weakly correlated
181 MER39B 1 * 74.0 Weakly correlated
182 MER4B-int 1 n.s 99.0 Highly correlated
183 MER57D 1 ** 87.0 Weakly correlated
184 MER61E 1 ** 43.0 Weakly correlated
185 MER66B 1 * 43.0 Weakly correlated
186 MER68-int 1 ** 99.0 Highly correlated
187 MER70A 1 ** 87.0 Weakly correlated
188 MER74A 1 * 99.0 Highly correlated
189 MER89 1 * 99.0 Highly correlated
190 MER90 1 ** 99.0 Highly correlated
191 MER9a3 1 ** 28.9 Weakly correlated
192 MLT1C-int 1 ** 94.0 Weakly correlated
193 MLT1E1A 1 n.s 99.0 Highly correlated
194 MLT1E2 1 n.s 99.0 Highly correlated
195 MLT1F1 1 n.s 99.0 Highly correlated
196 MLT1F2 1 n.s 99.0 Highly correlated
197 MLT1G 1 n.s 99.0 Highly correlated
198 MLT1H 1 n.s 99.0 Highly correlated
199 MLT1M 1 * 99.0 Highly correlated
200 MLT1O 1 n.s 99.0 Highly correlated
201 MSTB2 1 * 74.0 Weakly correlated
202 MamGypLTR1d 1 ** 99.0 Highly correlated
203 MamRep605 1 n.s 99.0 Highly correlated
204 Mam_R4 1 ** 99.0 Highly correlated
205 PABL_A-int 1 * 74.0 Weakly correlated
206 Plat_L3 1 * 99.0 Highly correlated
207 SVA_C 1 * 15.2 Weakly correlated
208 SVA_F 1 n.s 0.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1ME4b 63 **** 99.0 Highly correlated
2 L1M5 62 **** 99.0 Highly correlated
3 L1MC1 55 **** 99.0 Highly correlated
4 L1M4 38 **** 99.0 Highly correlated
5 L1ME1 37 **** 99.0 Highly correlated
6 L1MB7 32 **** 99.0 Highly correlated
7 L1MC 25 **** 99.0 Highly correlated
8 L1MEc 21 **** 99.0 Highly correlated
9 L2a 18 n.s 99.0 Highly correlated
10 L1ME4a 17 **** 99.0 Highly correlated
11 L1MD 16 **** 99.0 Highly correlated
12 L1MC2 15 **** 99.0 Highly correlated
13 L1MB8 14 **** 99.0 Highly correlated
14 L1ME3G 14 **** 99.0 Highly correlated
15 L1MC5a 13 **** 99.0 Highly correlated
16 MLT1D 13 **** 99.0 Highly correlated
17 L1ME3Cz 11 **** 99.0 Highly correlated
18 L1MD1 10 **** 99.0 Highly correlated
19 L1MEd 10 ** 99.0 Highly correlated
20 L1MCa 9 *** 99.0 Highly correlated
21 L1ME4c 9 **** 99.0 Highly correlated
22 MLT1C 9 ** 94.0 Weakly correlated
23 L1ME2 8 ** 99.0 Highly correlated
24 L1ME3A 8 ** 99.0 Highly correlated
25 L1ME3B 8 **** 99.0 Highly correlated
26 LTR8B 8 **** 43.0 Weakly correlated
27 L1MB5 7 ** 99.0 Highly correlated
28 L1MC4a 7 ** 99.0 Highly correlated
29 L1MC4 6 n.s 99.0 Highly correlated
30 L1MD2 6 * 99.0 Highly correlated
31 L1MDa 6 ** 99.0 Highly correlated
32 L1ME3 6 ** 99.0 Highly correlated
33 L1ME3F 6 **** 99.0 Highly correlated
34 L1MC3 5 n.s 99.0 Highly correlated
35 L1ME3C 5 **** 99.0 Highly correlated
36 L2c 5 n.s 99.0 Highly correlated
37 LTR8 5 *** 43.0 Weakly correlated
38 L1M2 4 n.s 99.0 Highly correlated
39 L1M3 4 * 99.0 Highly correlated
40 L1PA8A 4 * 74.0 Weakly correlated
41 LTR8A 4 **** 43.0 Weakly correlated
42 L1M1 3 n.s 74.0 Weakly correlated
43 L1M4b 3 * 99.0 Highly correlated
44 L1MA3 3 n.s 74.0 Weakly correlated
45 L1MA4A 3 n.s 87.0 Weakly correlated
46 L1ME3D 3 * 99.0 Highly correlated
47 L1MEf 3 n.s 99.0 Highly correlated
48 L2 3 n.s 99.0 Highly correlated
49 MER21-int 3 *** 99.0 Highly correlated
50 AluJr 2 n.s 74.0 Weakly correlated
51 HERVK-int 2 ** 28.9 Weakly correlated
52 L1M4a1 2 * 99.0 Highly correlated
53 L1M6 2 n.s 99.0 Highly correlated
54 L1MA4 2 n.s 87.0 Weakly correlated
55 L1MA6 2 n.s 87.0 Weakly correlated
56 L1MA9 2 n.s 99.0 Highly correlated
57 L1MD3 2 n.s 99.0 Highly correlated
58 L3 2 n.s 99.0 Highly correlated
59 MER50-int 2 ** 43.0 Weakly correlated
60 MIR3 2 n.s 99.0 Highly correlated
61 MIRb 2 n.s 99.0 Highly correlated
62 MLT1F 2 * 99.0 Highly correlated
63 MLT1G3 2 * 99.0 Highly correlated
64 MLT1J1-int 2 *** 99.0 Highly correlated
65 AluJb 1 n.s 74.0 Weakly correlated
66 AluSc5 1 n.s 74.0 Weakly correlated
67 AluSp 1 n.s 74.0 Weakly correlated
68 AluSx 1 n.s 74.0 Weakly correlated
69 AluSx1 1 n.s 74.0 Weakly correlated
70 AluYm1 1 n.s 19.6 Weakly correlated
71 FLAM_C 1 n.s 74.0 Weakly correlated
72 HAL1 1 n.s 99.0 Highly correlated
73 HERVE_a-int 1 * 28.9 Weakly correlated
74 HERVK13-int 1 *** 19.6 Weakly correlated
75 HERVL32-int 1 *** 43.0 Weakly correlated
76 L1M3b 1 * 99.0 Highly correlated
77 L1M4c 1 n.s 99.0 Highly correlated
78 L1MA5A 1 n.s 87.0 Weakly correlated
79 L1MB1 1 n.s 99.0 Highly correlated
80 L1MB3 1 n.s 99.0 Highly correlated
81 L1MB4 1 n.s 99.0 Highly correlated
82 L1MDb 1 * 99.0 Highly correlated
83 L1ME2z 1 n.s 99.0 Highly correlated
84 L1ME3E 1 n.s 99.0 Highly correlated
85 L1MEg 1 n.s 99.0 Highly correlated
86 L1MEj 1 n.s 99.0 Highly correlated
87 L1P4 1 n.s 74.0 Weakly correlated
88 L1PA4 1 n.s 19.6 Weakly correlated
89 L1PB 1 n.s 74.0 Weakly correlated
90 L1PREC2 1 n.s 43.0 Weakly correlated
91 L2b 1 n.s 99.0 Highly correlated
92 L4_B_Mam 1 n.s 99.0 Highly correlated
93 LTR10B1 1 *** 28.9 Weakly correlated
94 LTR16D1 1 *** 99.0 Highly correlated
95 LTR33A 1 * 99.0 Highly correlated
96 LTR50 1 n.s 99.0 Highly correlated
97 LTR82A 1 * 99.0 Highly correlated
98 LTR85c 1 ** 99.0 Highly correlated
99 MER4B-int 1 n.s 99.0 Highly correlated
100 MER68-int 1 ** 99.0 Highly correlated
101 MER90 1 ** 99.0 Highly correlated
102 MER9a3 1 ** 28.9 Weakly correlated
103 MIRc 1 n.s 99.0 Highly correlated
104 MLT1A0 1 n.s 99.0 Highly correlated
105 MLT1B 1 n.s 99.0 Highly correlated
106 MLT1E2 1 n.s 99.0 Highly correlated
107 MLT1F2 1 n.s 99.0 Highly correlated
108 MLT1G 1 n.s 99.0 Highly correlated
109 MLT1I 1 n.s 99.0 Highly correlated
110 MLT1K 1 n.s 99.0 Highly correlated
111 MSTB2 1 * 74.0 Weakly correlated
112 MamRTE1 1 n.s 99.0 Highly correlated
113 Plat_L3 1 * 99.0 Highly correlated
114 THE1B 1 n.s 43.0 Weakly correlated
115 L4_C_Mam 1 n.s 99.0 Highly correlated
116 MER21C 1 n.s 99.0 Highly correlated
117 MLT1N2 1 n.s 99.0 Highly correlated
118 AluY 1 n.s 74.0 Weakly correlated
119 LTR33 1 n.s 99.0 Highly correlated
120 MER21B 1 n.s 99.0 Highly correlated
121 THE1A 1 n.s 43.0 Weakly correlated
122 AluSx3 1 n.s 74.0 Weakly correlated
123 AluSz 1 n.s 74.0 Weakly correlated
124 LTR39 1 * 43.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 L2A 99.0 Highly correlated
2 LTR8B 43.0 Weakly correlated
3 MLT1C 94.0 Weakly correlated
4 MLT1D 99.0 Highly correlated