ZRdb KZFP & Repeats
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Human_ZNF18

  • Protein
    Zinc finger protein 18
  • Length
    549
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    160.0 Mya
  • Time of Changing in binding specificity
    160.0 Mya
  • Uniprot_ID
    P17022
  • NCBI_ID
    7566
Sequence:
MPVDLGQALGLLPSLAKAEDSQFSESDAALQEELSSPETARQLFRQFRYQVMSGPHETLKQLRKLCFQWLQPEVHTKEQILEILMLEQFLTILPGEIQMWVRKQCPGSGEEAVTLVESLKGDPQRLWQWISIQVLGQDILSEKMESPSCQVGEVEPHLEVVPQELGLENSSSGPGELLSHIVKEESDTEAELALAASQPARLEERLIRDQDLGASLLPAAPQEQWRQLDSTQKEQYWDLMLETYGKMVSGAGISHPKSDLTNSIEFGEELAGIYLHVNEKIPRPTCIGDRQENDKENLNLENHRDQELLHASCQASGEVPSQASLRGFFTEDEPGCFGEGENLPEALQNIQDEGTGEQLSPQERISEKQLGQHLPNPHSGEMSTMWLEEKRETSQKGQPRAPMAQKLPTCRECGKTFYRNSQLIFHQRTHTGETYFQCTICKKAFLRSSDFVKHQRTHTGEKPCKCDYCGKGFSDFSGLRHHEKIHTGEKPYKCPICEKSFIQRSNFNRHQRVHTGEKPYKCSHCGKSFSWSSSLDKHQRSHLGKKPFQ
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 scan 41..123
2 KRAB 211..283
3 C2h2 408..430
4 C2h2 436..458
5 C2h2 464..486
6 C2h2 492..514
7 C2h2 520..542
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
...
Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluY 4061 **** 74.0 Weakly correlated
2 MIRb 1651 **** 99.0 Weakly correlated
3 AluJb 1340 **** 74.0 Weakly correlated
4 L2a 1091 *** 99.0 Weakly correlated
5 MIR 1074 **** 99.0 Weakly correlated
6 AluSx1 1038 **** 74.0 Weakly correlated
7 AluSx 1035 **** 74.0 Weakly correlated
8 AluSz 955 **** 74.0 Weakly correlated
9 L2c 852 **** 99.0 Weakly correlated
10 L2b 793 **** 99.0 Weakly correlated
11 MIRc 773 **** 99.0 Weakly correlated
12 AluJr 750 **** 74.0 Weakly correlated
13 AluJo 747 **** 74.0 Weakly correlated
14 MIR3 703 **** 99.0 Weakly correlated
15 AluSq2 419 n.s 74.0 Weakly correlated
16 AluSp 378 n.s 74.0 Weakly correlated
17 AluSz6 369 **** 74.0 Weakly correlated
18 AluSg 350 **** 74.0 Weakly correlated
19 L2 345 n.s 99.0 Weakly correlated
20 AluSx3 326 **** 74.0 Weakly correlated
21 AluSc 245 n.s 74.0 Weakly correlated
22 L3 204 n.s 99.0 Weakly correlated
23 AluSc8 197 **** 74.0 Weakly correlated
24 L1M5 190 n.s 99.0 Weakly correlated
25 FLAM_C 168 **** 74.0 Weakly correlated
26 AluSq 159 ** 74.0 Weakly correlated
27 AluYm1 157 **** 19.6 Weakly correlated
28 L1MB7 156 n.s 99.0 Weakly correlated
29 L1MC4 144 n.s 99.0 Weakly correlated
30 MIR1_Amn 138 **** 319.0 Weakly correlated
31 AluJr4 134 ** 74.0 Weakly correlated
32 AluYc 134 **** 74.0 Weakly correlated
33 L1MB3 126 n.s 99.0 Weakly correlated
34 L1MB8 119 n.s 99.0 Weakly correlated
35 L1ME1 114 n.s 99.0 Weakly correlated
36 FRAM 110 **** 74.0 Weakly correlated
37 L1ME4a 106 n.s 99.0 Weakly correlated
38 HAL1 102 n.s 99.0 Weakly correlated
39 L1PA2 102 n.s 15.2 Weakly correlated
40 L1PB1 101 n.s 74.0 Weakly correlated
41 L1MC5a 96 n.s 99.0 Weakly correlated
42 L1ME4b 96 n.s 99.0 Weakly correlated
43 MLT1K 96 n.s 99.0 Weakly correlated
44 AluYh3 95 **** 15.2 Weakly correlated
45 AluSx4 94 ** 74.0 Weakly correlated
46 L1M4 94 n.s 99.0 Weakly correlated
47 LTR13 93 **** 19.6 Weakly correlated
48 L1MEc 90 n.s 99.0 Weakly correlated
49 AluYf1 87 **** 19.6 Weakly correlated
50 L1PA3 86 n.s 19.6 Weakly correlated
51 MLT1D 85 n.s 99.0 Weakly correlated
52 L1PA5 78 n.s 19.6 Weakly correlated
53 L1ME3G 77 n.s 99.0 Weakly correlated
54 MLT1B 77 n.s 99.0 Weakly correlated
55 MLT1H 77 * 99.0 Weakly correlated
56 AluYj4 75 **** 0.0 Weakly correlated
57 MLT1F 75 **** 99.0 Weakly correlated
58 AluSg7 74 * 74.0 Weakly correlated
59 L3b 74 **** 99.0 Weakly correlated
60 L1MEd 73 n.s 99.0 Weakly correlated
61 L1MD2 71 n.s 99.0 Weakly correlated
62 MLT1C 71 n.s 94.0 Weakly correlated
63 MamRTE1 70 **** 99.0 Weakly correlated
64 AluSg4 69 ** 74.0 Weakly correlated
65 L1ME3A 68 n.s 99.0 Weakly correlated
66 MSTA 68 n.s 43.0 Weakly correlated
67 Alu 61 **** 74.0 Weakly correlated
68 L1ME4c 61 ** 99.0 Weakly correlated
69 L1MB2 59 n.s 99.0 Weakly correlated
70 THE1D 59 n.s 43.0 Weakly correlated
71 MSTB1 58 *** 74.0 Weakly correlated
72 L1ME3 56 n.s 99.0 Weakly correlated
73 MLT1I 56 n.s 99.0 Weakly correlated
74 MLT1J 56 n.s 99.0 Weakly correlated
75 THE1B 55 n.s 43.0 Weakly correlated
76 L1MC5 54 n.s 99.0 Weakly correlated
77 FLAM_A 53 * 74.0 Weakly correlated
78 L1ME2z 51 n.s 99.0 Weakly correlated
79 L1MB5 50 n.s 99.0 Weakly correlated
80 L1MC3 50 n.s 99.0 Weakly correlated
81 MLT1A0 50 n.s 99.0 Weakly correlated
82 AmnSINE1 48 **** 319.0 Weakly correlated
83 L1MA9 47 n.s 99.0 Weakly correlated
84 L1MC4a 47 n.s 99.0 Weakly correlated
85 LTR41B 47 **** 99.0 Weakly correlated
86 AluSc5 46 n.s 74.0 Weakly correlated
87 L1PA4 46 n.s 19.6 Weakly correlated
88 MLT1F2 46 n.s 99.0 Weakly correlated
89 L1MC 45 n.s 99.0 Weakly correlated
90 L1ME3Cz 45 n.s 99.0 Weakly correlated
91 LTR41 45 **** 99.0 Weakly correlated
92 LTR8 45 n.s 43.0 Weakly correlated
93 LTR33 43 n.s 99.0 Weakly correlated
94 L1MC1 42 n.s 99.0 Weakly correlated
95 L1PA6 42 n.s 28.9 Weakly correlated
96 L1MEg 41 n.s 99.0 Weakly correlated
97 MER4-int 40 n.s 74.0 Weakly correlated
98 L1MEf 38 n.s 99.0 Weakly correlated
99 MLT1L 38 n.s 99.0 Weakly correlated
100 MLT1N2 38 ** 99.0 Weakly correlated
101 HERVH-int 37 n.s 28.9 Weakly correlated
102 L1M2 37 n.s 99.0 Weakly correlated
103 L1PA7 37 n.s 74.0 Weakly correlated
104 L4_A_Mam 37 n.s 99.0 Weakly correlated
105 L1ME2 36 n.s 99.0 Weakly correlated
106 LTR50 35 **** 99.0 Weakly correlated
107 L1MB4 34 n.s 99.0 Weakly correlated
108 L1MD 34 n.s 99.0 Weakly correlated
109 L1ME3B 34 n.s 99.0 Weakly correlated
110 MamGypLTR3 34 **** 99.0 Weakly correlated
111 MamSINE1 34 **** 99.0 Weakly correlated
112 L1M1 33 n.s 74.0 Weakly correlated
113 MLT1F1 33 * 99.0 Weakly correlated
114 MLT1J2 33 n.s 99.0 Weakly correlated
115 MLT1A 32 n.s 99.0 Weakly correlated
116 MLT1A1 32 n.s 87.0 Weakly correlated
117 LTR41C 31 **** 99.0 Weakly correlated
118 THE1A 31 n.s 43.0 Weakly correlated
119 MSTB 30 n.s 43.0 Weakly correlated
120 AluYa5 29 n.s 15.2 Weakly correlated
121 L1M3 29 n.s 99.0 Weakly correlated
122 L1M4b 29 n.s 99.0 Weakly correlated
123 L1PA17 29 n.s 74.0 Weakly correlated
124 LTR12C 29 n.s 19.6 Weakly correlated
125 MLT1E2 29 n.s 99.0 Weakly correlated
126 LTR16C 28 n.s 99.0 Weakly correlated
127 HAL1ME 27 n.s 99.0 Weakly correlated
128 HUERS-P3-int 27 *** 43.0 Weakly correlated
129 L1MA4 27 n.s 87.0 Weakly correlated
130 L1MDa 27 n.s 99.0 Weakly correlated
131 LTR16A1 27 ** 99.0 Weakly correlated
132 MER50 27 n.s 43.0 Weakly correlated
133 MLT1G3 27 * 99.0 Weakly correlated
134 FAM 26 ** 87.0 Weakly correlated
135 LTR53 26 **** 99.0 Weakly correlated
136 MER52A 26 n.s 74.0 Weakly correlated
137 MLT1H2 26 n.s 99.0 Weakly correlated
138 LFSINE_Vert 25 **** 319.0 Weakly correlated
139 LTR10A 25 **** 28.9 Weakly correlated
140 LTR16A 25 n.s 99.0 Weakly correlated
141 LTR16A2 25 *** 99.0 Weakly correlated
142 MER21C 25 n.s 99.0 Weakly correlated
143 THE1C 25 n.s 43.0 Weakly correlated
144 ERVL-E-int 24 n.s 99.0 Weakly correlated
145 L1MD1 24 n.s 99.0 Weakly correlated
146 AluSq4 23 ** 74.0 Weakly correlated
147 AluYe5 23 **** 74.0 Weakly correlated
148 L1ME3F 23 n.s 99.0 Weakly correlated
149 Plat_L3 23 *** 99.0 Weakly correlated
150 AluSq10 22 ** 74.0 Weakly correlated
151 AluYk2 22 **** 19.6 Weakly correlated
152 AluYk4 22 **** 15.2 Weakly correlated
153 ERV3-16A3_I-int 22 n.s 99.0 Weakly correlated
154 L1MCa 22 n.s 99.0 Weakly correlated
155 L1PA15 22 n.s 74.0 Weakly correlated
156 MER41B 22 n.s 74.0 Weakly correlated
157 MER61E 22 **** 43.0 Weakly correlated
158 MLT1J1 22 n.s 99.0 Weakly correlated
159 LTR55 21 **** 99.0 Weakly correlated
160 MER61-int 21 n.s 43.0 Weakly correlated
161 MER66C 21 **** 43.0 Weakly correlated
162 MER68 21 * 99.0 Weakly correlated
163 PRIMA4-int 21 **** 74.0 Weakly correlated
164 L1PA16 20 n.s 74.0 Weakly correlated
165 LTR13_ 20 **** 28.9 Weakly correlated
166 LTR4 20 **** 28.9 Weakly correlated
167 MLT1G 20 n.s 99.0 Weakly correlated
168 MLT2F 20 * 99.0 Weakly correlated
169 HERVIP10FH-int 19 *** 28.9 Weakly correlated
170 HERVK-int 19 * 28.9 Weakly correlated
171 L1ME3D 19 n.s 99.0 Weakly correlated
172 L1ME5 19 n.s 99.0 Weakly correlated
173 L1P2 19 n.s 28.9 Weakly correlated
174 LTR5_Hs 19 n.s 0.0 Weakly correlated
175 LTR88b 19 **** 99.0 Weakly correlated
176 MLT1G1 19 n.s 99.0 Weakly correlated
177 L1M4c 18 n.s 99.0 Weakly correlated
178 L1MEi 18 n.s 99.0 Weakly correlated
179 L1PBa 18 n.s 74.0 Weakly correlated
180 LTR78 18 n.s 99.0 Weakly correlated
181 MER51B 18 **** 43.0 Weakly correlated
182 MSTD 18 n.s 74.0 Weakly correlated
183 L1MA8 17 n.s 87.0 Weakly correlated
184 L1PA13 17 n.s 74.0 Weakly correlated
185 L1PB4 17 n.s 99.0 Weakly correlated
186 LTR16E2 17 n.s 99.0 Weakly correlated
187 LTR1A2 17 n.s 43.0 Weakly correlated
188 LTR65 17 **** 99.0 Weakly correlated
189 LTR71B 17 **** 43.0 Weakly correlated
190 LTR8B 17 n.s 43.0 Weakly correlated
191 MER4B-int 17 n.s 99.0 Weakly correlated
192 MLT2D 17 n.s 99.0 Weakly correlated
193 AluYk11 16 **** 15.2 Weakly correlated
194 ERVL-B4-int 16 n.s 99.0 Weakly correlated
195 HAL1b 16 n.s 99.0 Weakly correlated
196 L1MC2 16 n.s 99.0 Weakly correlated
197 L4_C_Mam 16 n.s 99.0 Weakly correlated
198 LTR14B 16 **** 28.9 Weakly correlated
199 LTR16B2 16 n.s 99.0 Weakly correlated
200 LTR16E1 16 n.s 99.0 Weakly correlated
201 MER61A 16 **** 43.0 Weakly correlated
202 MamGypLTR3a 16 *** 99.0 Weakly correlated
203 SVA_D 16 n.s 15.2 Weakly correlated
204 AluYh3a3 15 **** 15.2 Weakly correlated
205 L1MA2 15 n.s 74.0 Weakly correlated
206 L1PA11 15 n.s 74.0 Weakly correlated
207 L1PA8 15 n.s 74.0 Weakly correlated
208 L1PREC2 15 n.s 43.0 Weakly correlated
209 LTR13A 15 **** 28.9 Weakly correlated
210 LTR18B 15 **** 43.0 Weakly correlated
211 LTR67B 15 n.s 99.0 Weakly correlated
212 LTR76 15 **** 74.0 Weakly correlated
213 LTR7C 15 **** 28.9 Weakly correlated
214 LTR9 15 * 43.0 Weakly correlated
215 MER72 15 ** 43.0 Weakly correlated
216 MLT1E1A 15 n.s 99.0 Weakly correlated
217 MLT1E3 15 n.s 99.0 Weakly correlated
218 MLT2B4 15 n.s 99.0 Weakly correlated
219 MamGypsy2-I 15 n.s 99.0 Weakly correlated
220 SVA_F 15 n.s 0.0 Weakly correlated
221 THE1C-int 15 n.s 43.0 Weakly correlated
222 HUERS-P3b-int 14 n.s 43.0 Weakly correlated
223 L1HS 14 n.s 8.6 Weakly correlated
224 L1MA3 14 n.s 74.0 Weakly correlated
225 L1MA6 14 n.s 87.0 Weakly correlated
226 L1P3 14 n.s 74.0 Weakly correlated
227 L1PA10 14 n.s 74.0 Weakly correlated
228 L1PA15-16 14 n.s 74.0 Weakly correlated
229 L1PB 14 n.s 74.0 Weakly correlated
230 L4_B_Mam 14 n.s 99.0 Weakly correlated
231 LTR19C 14 **** 43.0 Weakly correlated
232 LTR56 14 ** 74.0 Weakly correlated
233 MER41A 14 n.s 74.0 Weakly correlated
234 MER77 14 n.s 99.0 Weakly correlated
235 MSTA-int 14 n.s 43.0 Weakly correlated
236 MSTB2 14 n.s 74.0 Weakly correlated
237 LTR62 13 **** 74.0 Weakly correlated
238 LTR79 13 n.s 99.0 Weakly correlated
239 LTR88a 13 **** 99.0 Weakly correlated
240 MER34A 13 n.s 99.0 Weakly correlated
241 MER48 13 **** 28.9 Weakly correlated
242 MER54A 13 * 87.0 Weakly correlated
243 MLT1H1 13 n.s 99.0 Weakly correlated
244 MLT1O 13 n.s 99.0 Weakly correlated
245 MamRep605 13 n.s 99.0 Weakly correlated
246 THE1B-int 13 n.s 43.0 Weakly correlated
247 X6A_LINE 13 **** 99.0 Weakly correlated
248 AluYk3 12 n.s 19.6 Weakly correlated
249 CR1_Mam 12 * 99.0 Weakly correlated
250 HERVP71A-int 12 * 43.0 Weakly correlated
251 L1MA5 12 n.s 87.0 Weakly correlated
252 L1MCc 12 n.s 99.0 Weakly correlated
253 L1P1 12 n.s 19.6 Weakly correlated
254 L2-3_Crp 12 n.s 431.0 Weakly correlated
255 LTR25-int 12 n.s 43.0 Weakly correlated
256 LTR52 12 * 99.0 Weakly correlated
257 MER39 12 n.s 74.0 Weakly correlated
258 MER89 12 n.s 99.0 Weakly correlated
259 MER9a1 12 *** 19.6 Weakly correlated
260 MLT1M 12 n.s 99.0 Weakly correlated
261 THE1D-int 12 n.s 28.9 Weakly correlated
262 HERVH48-int 11 ** 28.9 Weakly correlated
263 L1M6 11 n.s 99.0 Weakly correlated
264 L1MD3 11 n.s 99.0 Weakly correlated
265 LTR104_Mam 11 n.s 99.0 Weakly correlated
266 LTR14 11 **** 28.9 Weakly correlated
267 LTR19B 11 **** 43.0 Weakly correlated
268 LTR2 11 n.s 28.9 Weakly correlated
269 LTR46 11 **** 43.0 Weakly correlated
270 MER4A1 11 n.s 74.0 Weakly correlated
271 MER65C 11 ** 74.0 Weakly correlated
272 MER66B 11 n.s 43.0 Weakly correlated
273 MER67C 11 n.s 99.0 Weakly correlated
274 MER74B 11 n.s 99.0 Weakly correlated
275 Mam_R4 11 **** 99.0 Weakly correlated
276 SVA_A 11 n.s 19.6 Weakly correlated
277 AluYb8 10 n.s 15.2 Weakly correlated
278 CR1-16_AMi 10 **** 319.0 Weakly correlated
279 ERV24_Prim-int 10 * 74.0 Weakly correlated
280 HERVE-int 10 n.s 19.6 Weakly correlated
281 HERVL40-int 10 n.s 99.0 Weakly correlated
282 L1M3f 10 n.s 87.0 Weakly correlated
283 L1M7 10 n.s 99.0 Weakly correlated
284 L1MA7 10 n.s 87.0 Weakly correlated
285 LTR16 10 n.s 99.0 Weakly correlated
286 LTR33A 10 n.s 99.0 Weakly correlated
287 LTR37B 10 n.s 99.0 Weakly correlated
288 MER31-int 10 n.s 99.0 Weakly correlated
289 MER41C 10 * 74.0 Weakly correlated
290 MER54B 10 ** 87.0 Weakly correlated
291 MER74A 10 n.s 99.0 Weakly correlated
292 MamGypsy2-LTR 10 **** 99.0 Weakly correlated
293 HERV17-int 9 n.s 28.9 Weakly correlated
294 L1MDb 9 n.s 99.0 Weakly correlated
295 L1P4 9 n.s 74.0 Weakly correlated
296 LTR10B1 9 **** 28.9 Weakly correlated
297 LTR18A 9 **** 43.0 Weakly correlated
298 LTR21A 9 **** 28.9 Weakly correlated
299 LTR33B 9 n.s 99.0 Weakly correlated
300 LTR49-int 9 n.s 74.0 Weakly correlated
301 LTR51 9 ** 74.0 Weakly correlated
302 LTR54 9 n.s 74.0 Weakly correlated
303 LTR5B 9 n.s 28.9 Weakly correlated
304 LTR85a 9 n.s 99.0 Weakly correlated
305 LTR91 9 **** 99.0 Weakly correlated
306 MER101-int 9 n.s 74.0 Weakly correlated
307 MER39B 9 n.s 74.0 Weakly correlated
308 MER49 9 n.s 43.0 Weakly correlated
309 MER65D 9 *** 87.0 Weakly correlated
310 MER90 9 * 99.0 Weakly correlated
311 MER90a 9 n.s 99.0 Weakly correlated
312 AluYc3 8 ** 74.0 Weakly correlated
313 AluYi6 8 *** 15.2 Weakly correlated
314 HERVK3-int 8 n.s 28.9 Weakly correlated
315 L1M4a1 8 n.s 99.0 Weakly correlated
316 L1MA4A 8 n.s 87.0 Weakly correlated
317 L1MB1 8 n.s 99.0 Weakly correlated
318 L1ME3C 8 n.s 99.0 Weakly correlated
319 L1ME3E 8 n.s 99.0 Weakly correlated
320 LTR10E 8 ** 28.9 Weakly correlated
321 LTR12E 8 ** 19.6 Weakly correlated
322 LTR25 8 ** 43.0 Weakly correlated
323 LTR2B 8 * 19.6 Weakly correlated
324 LTR3B 8 **** 28.9 Weakly correlated
325 LTR7 8 n.s 19.6 Weakly correlated
326 LTR85b 8 n.s 99.0 Weakly correlated
327 LTR85c 8 n.s 99.0 Weakly correlated
328 LTR9D 8 n.s 43.0 Weakly correlated
329 MER110 8 * 99.0 Weakly correlated
330 MER51A 8 n.s 43.0 Weakly correlated
331 MER52C 8 n.s 74.0 Weakly correlated
332 MER52D 8 n.s 74.0 Weakly correlated
333 MER57B2 8 n.s 43.0 Weakly correlated
334 MER61C 8 ** 43.0 Weakly correlated
335 MER67A 8 ** 99.0 Weakly correlated
336 MER70B 8 n.s 87.0 Weakly correlated
337 MER92B 8 n.s 99.0 Weakly correlated
338 MSTC 8 n.s 74.0 Weakly correlated
339 HAL1M8 7 n.s 99.0 Weakly correlated
340 L1MA1 7 n.s 74.0 Weakly correlated
341 L1MEh 7 n.s 99.0 Weakly correlated
342 L1PB3 7 n.s 74.0 Weakly correlated
343 L2-1_AMi 7 * 319.0 Weakly correlated
344 L5 7 * 99.0 Weakly correlated
345 LTR15 7 ** 28.9 Weakly correlated
346 LTR2752 7 n.s 43.0 Weakly correlated
347 LTR37A 7 n.s 99.0 Weakly correlated
348 LTR40a 7 n.s 99.0 Weakly correlated
349 LTR48 7 n.s 74.0 Weakly correlated
350 LTR75 7 ** 99.0 Weakly correlated
351 LTR88c 7 * 99.0 Weakly correlated
352 MER101 7 ** 74.0 Weakly correlated
353 MER11C 7 n.s 19.6 Weakly correlated
354 MER21B 7 n.s 99.0 Weakly correlated
355 MER34C2 7 * 74.0 Weakly correlated
356 MER41-int 7 n.s 74.0 Weakly correlated
357 MER4B 7 n.s 74.0 Weakly correlated
358 MER4CL34 7 n.s 43.0 Weakly correlated
359 MER4D 7 n.s 74.0 Weakly correlated
360 MER57B1 7 n.s 43.0 Weakly correlated
361 MER76 7 n.s 99.0 Weakly correlated
362 MER83 7 * 43.0 Weakly correlated
363 MER9a3 7 n.s 28.9 Weakly correlated
364 MLT2A2 7 n.s 74.0 Weakly correlated
365 MLT2C1 7 n.s 99.0 Weakly correlated
366 X2_LINE 7 **** 319.0 Weakly correlated
367 AluYb9 6 ** 15.2 Weakly correlated
368 AluYe6 6 *** 74.0 Weakly correlated
369 HERV16-int 6 n.s 99.0 Weakly correlated
370 HERVK22-int 6 n.s 43.0 Weakly correlated
371 HERVK9-int 6 n.s 28.9 Weakly correlated
372 HERVL-int 6 n.s 74.0 Weakly correlated
373 L1M3e 6 n.s 99.0 Weakly correlated
374 L1MA10 6 n.s 99.0 Weakly correlated
375 L1PA14 6 n.s 74.0 Weakly correlated
376 L1PB2 6 n.s 74.0 Weakly correlated
377 LTR12_ 6 n.s 28.9 Weakly correlated
378 LTR16B 6 n.s 99.0 Weakly correlated
379 LTR16B1 6 n.s 99.0 Weakly correlated
380 LTR16D 6 n.s 99.0 Weakly correlated
381 LTR36 6 n.s 74.0 Weakly correlated
382 LTR38B 6 ** 74.0 Weakly correlated
383 LTR45B 6 * 74.0 Weakly correlated
384 LTR45C 6 n.s 99.0 Weakly correlated
385 LTR49 6 n.s 74.0 Weakly correlated
386 LTR64 6 * 74.0 Weakly correlated
387 LTR78B 6 n.s 99.0 Weakly correlated
388 LTR84b 6 n.s 99.0 Weakly correlated
389 LTR87 6 n.s 99.0 Weakly correlated
390 LTR8A 6 n.s 43.0 Weakly correlated
391 MER11B 6 n.s 19.6 Weakly correlated
392 MER31B 6 n.s 99.0 Weakly correlated
393 MER50-int 6 n.s 43.0 Weakly correlated
394 MER57E1 6 * 87.0 Weakly correlated
395 MER61F 6 ** 43.0 Weakly correlated
396 MER67B 6 n.s 99.0 Weakly correlated
397 MLT2B3 6 n.s 99.0 Weakly correlated
398 MamGypLTR1a 6 n.s 99.0 Weakly correlated
399 MamGypLTR2c 6 n.s 99.0 Weakly correlated
400 SVA_B 6 n.s 15.2 Weakly correlated
401 AluYa8 5 *** 15.2 Weakly correlated
402 HERV15-int 5 n.s 28.9 Weakly correlated
403 HERVIP10B3-int 5 n.s 28.9 Weakly correlated
404 L1PA8A 5 n.s 74.0 Weakly correlated
405 L1PBa1 5 n.s 74.0 Weakly correlated
406 LOR1-int 5 n.s 74.0 Weakly correlated
407 LTR101_Mam 5 n.s 99.0 Weakly correlated
408 LTR10B 5 *** 28.9 Weakly correlated
409 LTR10B2 5 *** 28.9 Weakly correlated
410 LTR10C 5 n.s 28.9 Weakly correlated
411 LTR10F 5 n.s 28.9 Weakly correlated
412 LTR16D1 5 ** 99.0 Weakly correlated
413 LTR19A 5 n.s 43.0 Weakly correlated
414 LTR26 5 n.s 74.0 Weakly correlated
415 LTR3 5 *** 28.9 Weakly correlated
416 LTR33C 5 n.s 99.0 Weakly correlated
417 LTR34 5 * 74.0 Weakly correlated
418 LTR35A 5 *** 43.0 Weakly correlated
419 LTR3B_ 5 * 28.9 Weakly correlated
420 LTR42 5 * 74.0 Weakly correlated
421 LTR75B 5 ** 99.0 Weakly correlated
422 LTR81A 5 n.s 99.0 Weakly correlated
423 LTR81B 5 n.s 99.0 Weakly correlated
424 MER11A 5 n.s 28.9 Weakly correlated
425 MER21-int 5 n.s 99.0 Weakly correlated
426 MER31A 5 n.s 87.0 Weakly correlated
427 MER34 5 n.s 87.0 Weakly correlated
428 MER41G 5 *** 74.0 Weakly correlated
429 MER57-int 5 n.s 87.0 Weakly correlated
430 MER57F 5 n.s 74.0 Weakly correlated
431 MER77B 5 n.s 99.0 Weakly correlated
432 MLT2B1 5 n.s 99.0 Weakly correlated
433 MLT2B2 5 n.s 99.0 Weakly correlated
434 SVA_E 5 n.s 0.0 Weakly correlated
435 AluYg6 4 n.s 15.2 Weakly correlated
436 CR1-3_Croc 4 n.s 319.0 Weakly correlated
437 ERV3-16A3_LTR 4 n.s 99.0 Weakly correlated
438 HERV3-int 4 n.s 28.9 Weakly correlated
439 HERVFH21-int 4 n.s 28.9 Weakly correlated
440 HERVI-int 4 n.s 28.9 Weakly correlated
441 L1M4a2 4 n.s 99.0 Weakly correlated
442 L1MA5A 4 n.s 87.0 Weakly correlated
443 L1MEb 4 n.s 99.0 Weakly correlated
444 L1MEg2 4 n.s 99.0 Weakly correlated
445 L1P4d 4 n.s 74.0 Weakly correlated
446 L1PA12 4 n.s 74.0 Weakly correlated
447 LOR1b 4 n.s 74.0 Weakly correlated
448 LTR105_Mam 4 n.s 99.0 Weakly correlated
449 LTR12D 4 n.s 19.6 Weakly correlated
450 LTR17 4 n.s 28.9 Weakly correlated
451 LTR1D1 4 n.s 43.0 Weakly correlated
452 LTR22C0 4 ** 28.9 Weakly correlated
453 LTR24B 4 n.s 74.0 Weakly correlated
454 LTR29 4 n.s 43.0 Weakly correlated
455 LTR40b 4 n.s 99.0 Weakly correlated
456 LTR40c 4 n.s 99.0 Weakly correlated
457 LTR47A 4 n.s 74.0 Weakly correlated
458 LTR54B 4 n.s 74.0 Weakly correlated
459 LTR57 4 n.s 74.0 Weakly correlated
460 LTR60B 4 n.s 74.0 Weakly correlated
461 LTR9B 4 n.s 43.0 Weakly correlated
462 MER21A 4 n.s 74.0 Weakly correlated
463 MER34A1 4 n.s 99.0 Weakly correlated
464 MER34B 4 n.s 87.0 Weakly correlated
465 MER34D 4 n.s 74.0 Weakly correlated
466 MER4A 4 n.s 74.0 Weakly correlated
467 MER52-int 4 n.s 99.0 Weakly correlated
468 MER57A1 4 n.s 43.0 Weakly correlated
469 MER57D 4 n.s 87.0 Weakly correlated
470 MER57E3 4 * 74.0 Weakly correlated
471 MER61B 4 n.s 43.0 Weakly correlated
472 MamGypLTR2b 4 n.s 99.0 Weakly correlated
473 MamRep1151 4 n.s 99.0 Weakly correlated
474 SVA_C 4 n.s 15.2 Weakly correlated
475 UCON86 4 **** 319.0 Weakly correlated
476 X6B_LINE 4 n.s 99.0 Weakly correlated
477 X7A_LINE 4 n.s 319.0 Weakly correlated
478 ERV24B_Prim-int 3 n.s 74.0 Weakly correlated
479 HERV1_LTRe 3 *** 43.0 Weakly correlated
480 HERV9-int 3 n.s 28.9 Weakly correlated
481 HERVIP10F-int 3 n.s 28.9 Weakly correlated
482 HERVK13-int 3 n.s 19.6 Weakly correlated
483 HERVK14C-int 3 n.s 28.9 Weakly correlated
484 HERVS71-int 3 n.s 28.9 Weakly correlated
485 HUERS-P2-int 3 n.s 43.0 Weakly correlated
486 L1M2a 3 n.s 87.0 Weakly correlated
487 L1M6B 3 n.s 99.0 Weakly correlated
488 L1M8 3 n.s 99.0 Weakly correlated
489 L1P4a 3 n.s 74.0 Weakly correlated
490 L1PBb 3 n.s 74.0 Weakly correlated
491 LTR1 3 n.s 43.0 Weakly correlated
492 LTR102_Mam 3 n.s 99.0 Weakly correlated
493 LTR103b_Mam 3 n.s 99.0 Weakly correlated
494 LTR106_Mam 3 n.s 99.0 Weakly correlated
495 LTR10D 3 n.s 28.9 Weakly correlated
496 LTR14C 3 n.s 28.9 Weakly correlated
497 LTR23 3 n.s 74.0 Weakly correlated
498 LTR2C 3 n.s 19.6 Weakly correlated
499 LTR33A_ 3 n.s 99.0 Weakly correlated
500 LTR44 3 n.s 74.0 Weakly correlated
501 LTR47A2 3 n.s 74.0 Weakly correlated
502 LTR71A 3 n.s 43.0 Weakly correlated
503 LTR73 3 n.s 99.0 Weakly correlated
504 LTR82A 3 n.s 99.0 Weakly correlated
505 LTR89 3 n.s 99.0 Weakly correlated
506 MER110A 3 n.s 99.0 Weakly correlated
507 MER11D 3 n.s 19.6 Weakly correlated
508 MER4C 3 n.s 74.0 Weakly correlated
509 MER4D1 3 n.s 74.0 Weakly correlated
510 MER50C 3 ** 43.0 Weakly correlated
511 MER51D 3 * 43.0 Weakly correlated
512 MER51E 3 n.s 43.0 Weakly correlated
513 MER57A-int 3 n.s 43.0 Weakly correlated
514 MER65A 3 n.s 74.0 Weakly correlated
515 MER65B 3 * 74.0 Weakly correlated
516 MER73 3 n.s 87.0 Weakly correlated
517 MER74C 3 n.s 99.0 Weakly correlated
518 MER83C 3 * 43.0 Weakly correlated
519 MSTA1 3 n.s 74.0 Weakly correlated
520 MamGypLTR1b 3 n.s 99.0 Weakly correlated
521 PABL_B 3 n.s 43.0 Weakly correlated
522 PrimLTR79 3 ** 74.0 Weakly correlated
523 X7B_LINE 3 n.s 319.0 Weakly correlated
524 X7C_LINE 3 n.s 319.0 Weakly correlated
525 AluYh9 2 ** 15.2 Weakly correlated
526 AmnSINE2 2 n.s 319.0 Weakly correlated
527 CR1-L3A_Croc 2 n.s 319.0 Weakly correlated
528 HERV1_I-int 2 n.s 43.0 Weakly correlated
529 HERV35I-int 2 n.s 43.0 Weakly correlated
530 HERV4_I-int 2 n.s 43.0 Weakly correlated
531 HERVE_a-int 2 n.s 28.9 Weakly correlated
532 HERVKC4-int 2 n.s 28.9 Weakly correlated
533 L1M 2 n.s 74.0 Weakly correlated
534 L1M2c 2 n.s 87.0 Weakly correlated
535 L1M3c 2 n.s 99.0 Weakly correlated
536 L1P4b 2 n.s 74.0 Weakly correlated
537 LTR06 2 * 74.0 Weakly correlated
538 LTR10G 2 n.s 28.9 Weakly correlated
539 LTR16D2 2 n.s 99.0 Weakly correlated
540 LTR1D 2 n.s 43.0 Weakly correlated
541 LTR1E 2 n.s 43.0 Weakly correlated
542 LTR22B 2 n.s 28.9 Weakly correlated
543 LTR24C 2 n.s 74.0 Weakly correlated
544 LTR26E 2 n.s 74.0 Weakly correlated
545 LTR27 2 n.s 43.0 Weakly correlated
546 LTR27B 2 n.s 43.0 Weakly correlated
547 LTR27C 2 n.s 43.0 Weakly correlated
548 LTR27D 2 n.s 43.0 Weakly correlated
549 LTR28C 2 n.s 43.0 Weakly correlated
550 LTR30 2 n.s 28.9 Weakly correlated
551 LTR37-int 2 n.s 99.0 Weakly correlated
552 LTR40A1 2 n.s 99.0 Weakly correlated
553 LTR43-int 2 n.s 74.0 Weakly correlated
554 LTR53-int 2 n.s 99.0 Weakly correlated
555 LTR68 2 n.s 99.0 Weakly correlated
556 LTR77 2 n.s 94.0 Weakly correlated
557 LTR80B 2 n.s 99.0 Weakly correlated
558 LTR81C 2 n.s 99.0 Weakly correlated
559 LTR83 2 n.s 99.0 Weakly correlated
560 LTR90A 2 n.s 99.0 Weakly correlated
561 MER41D 2 n.s 74.0 Weakly correlated
562 MER4E 2 n.s 74.0 Weakly correlated
563 MER4E1 2 n.s 74.0 Weakly correlated
564 MER51-int 2 n.s 43.0 Weakly correlated
565 MER51C 2 n.s 43.0 Weakly correlated
566 MER57C1 2 n.s 74.0 Weakly correlated
567 MER61D 2 n.s 43.0 Weakly correlated
568 MER65-int 2 n.s 87.0 Weakly correlated
569 MER66A 2 n.s 43.0 Weakly correlated
570 MER68B 2 n.s 99.0 Weakly correlated
571 MER70C 2 n.s 99.0 Weakly correlated
572 MER92D 2 n.s 99.0 Weakly correlated
573 MER9a2 2 n.s 19.6 Weakly correlated
574 MLT1A0-int 2 n.s 99.0 Weakly correlated
575 MLT1A1-int 2 n.s 87.0 Weakly correlated
576 MLT1C-int 2 n.s 94.0 Weakly correlated
577 MLT1E 2 n.s 99.0 Weakly correlated
578 MLT1E1 2 n.s 99.0 Weakly correlated
579 MLT1F1-int 2 n.s 99.0 Weakly correlated
580 MLT1F2-int 2 n.s 99.0 Weakly correlated
581 MLT1J-int 2 n.s 99.0 Weakly correlated
582 MLT1J1-int 2 n.s 99.0 Weakly correlated
583 MamGypLTR1c 2 n.s 99.0 Weakly correlated
584 MamGypLTR1d 2 n.s 99.0 Weakly correlated
585 MamRep1527 2 n.s 99.0 Weakly correlated
586 PABL_A-int 2 n.s 74.0 Weakly correlated
587 Penelope1_Vert 2 n.s 319.0 Weakly correlated
588 THE1A-int 2 n.s 43.0 Weakly correlated
589 X5B_LINE 2 *** 319.0 Weakly correlated
590 X9_LINE 2 n.s 319.0 Weakly correlated
591 AluYh7 1 n.s 0.0 Weakly correlated
592 CR1-12_AMi 1 n.s 319.0 Weakly correlated
593 ERVL-int 1 n.s 99.0 Weakly correlated
594 ERVL47-int 1 n.s 74.0 Weakly correlated
595 HERV-Fc1-int 1 n.s 8.6 Weakly correlated
596 HERV-Fc1_LTR1 1 ** 15.2 Weakly correlated
597 HERV1_LTRd 1 ** 43.0 Weakly correlated
598 HERV9N-int 1 n.s 19.6 Weakly correlated
599 HERVL18-int 1 n.s 43.0 Weakly correlated
600 HERVL74-int 1 n.s 99.0 Weakly correlated
601 HUERS-P1-int 1 n.s 43.0 Weakly correlated
602 L1MCb 1 n.s 99.0 Weakly correlated
603 L1MEg1 1 n.s 99.0 Weakly correlated
604 L1MEj 1 n.s 99.0 Weakly correlated
605 L1P3b 1 n.s 43.0 Weakly correlated
606 L1P5 1 n.s 74.0 Weakly correlated
607 LOR1a 1 n.s 74.0 Weakly correlated
608 LTR103_Mam 1 n.s 99.0 Weakly correlated
609 LTR107_Mam 1 n.s 99.0 Weakly correlated
610 LTR108d_Mam 1 n.s 99.0 Weakly correlated
611 LTR108e_Mam 1 n.s 99.0 Weakly correlated
612 LTR12 1 n.s 28.9 Weakly correlated
613 LTR12F 1 n.s 28.9 Weakly correlated
614 LTR14A 1 n.s 28.9 Weakly correlated
615 LTR1A1 1 n.s 43.0 Weakly correlated
616 LTR1B 1 n.s 43.0 Weakly correlated
617 LTR1B1 1 n.s 43.0 Weakly correlated
618 LTR22B2 1 * 28.9 Weakly correlated
619 LTR24 1 n.s 74.0 Weakly correlated
620 LTR26B 1 n.s 74.0 Weakly correlated
621 LTR26D 1 n.s 0.0 Weakly correlated
622 LTR28B 1 n.s 43.0 Weakly correlated
623 LTR31 1 n.s 74.0 Weakly correlated
624 LTR32 1 n.s 43.0 Weakly correlated
625 LTR35B 1 n.s 43.0 Weakly correlated
626 LTR39 1 n.s 43.0 Weakly correlated
627 LTR3A 1 n.s 28.9 Weakly correlated
628 LTR43 1 n.s 74.0 Weakly correlated
629 LTR58 1 n.s 99.0 Weakly correlated
630 LTR59 1 n.s 43.0 Weakly correlated
631 LTR66 1 n.s 43.0 Weakly correlated
632 LTR6A 1 n.s 28.9 Weakly correlated
633 LTR72 1 n.s 74.0 Weakly correlated
634 LTR7B 1 n.s 28.9 Weakly correlated
635 LTR82B 1 n.s 99.0 Weakly correlated
636 LTR86A2 1 n.s 99.0 Weakly correlated
637 LTR9A1 1 n.s 43.0 Weakly correlated
638 MER101B 1 n.s 87.0 Weakly correlated
639 MER110-int 1 n.s 99.0 Weakly correlated
640 MER34-int 1 n.s 99.0 Weakly correlated
641 MER34B-int 1 n.s 99.0 Weakly correlated
642 MER41E 1 n.s 74.0 Weakly correlated
643 MER4A1_ 1 n.s 74.0 Weakly correlated
644 MER57C2 1 n.s 87.0 Weakly correlated
645 MER66D 1 n.s 43.0 Weakly correlated
646 MER67D 1 n.s 99.0 Weakly correlated
647 MER70A 1 n.s 87.0 Weakly correlated
648 MER72B 1 n.s 43.0 Weakly correlated
649 MER88 1 n.s 99.0 Weakly correlated
650 MER92A 1 n.s 99.0 Weakly correlated
651 MER92C 1 n.s 99.0 Weakly correlated
652 MER95 1 n.s 99.0 Weakly correlated
653 MER9B 1 n.s 28.9 Weakly correlated
654 MLT1B-int 1 n.s 99.0 Weakly correlated
655 MLT1D-int 1 n.s 99.0 Weakly correlated
656 MLT1G1-int 1 n.s 99.0 Weakly correlated
657 MLT1K-int 1 n.s 99.0 Weakly correlated
658 MLT2A1 1 n.s 74.0 Weakly correlated
659 MLT2C2 1 n.s 99.0 Weakly correlated
660 MLT2E 1 n.s 99.0 Weakly correlated
661 MSTD-int 1 n.s 74.0 Weakly correlated
662 MamGyp-int 1 n.s 99.0 Weakly correlated
663 PABL_A 1 n.s 43.0 Weakly correlated
664 PABL_B-int 1 n.s 74.0 Weakly correlated
665 PRIMA41-int 1 n.s 74.0 Weakly correlated
666 PRIMA4_LTR 1 n.s 74.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluY 2433 **** 74.0 Weakly correlated
2 AluJb 387 n.s 74.0 Weakly correlated
3 AluSx 333 n.s 74.0 Weakly correlated
4 AluSx1 321 n.s 74.0 Weakly correlated
5 AluSz 321 n.s 74.0 Weakly correlated
6 AluJr 218 n.s 74.0 Weakly correlated
7 AluJo 212 n.s 74.0 Weakly correlated
8 AluSq2 129 n.s 74.0 Weakly correlated
9 MIRb 120 n.s 99.0 Weakly correlated
10 AluSp 119 n.s 74.0 Weakly correlated
11 AluSg 115 n.s 74.0 Weakly correlated
12 L2a 107 n.s 99.0 Weakly correlated
13 AluSz6 106 n.s 74.0 Weakly correlated
14 AluSx3 95 n.s 74.0 Weakly correlated
15 AluYm1 80 **** 19.6 Weakly correlated
16 AluSc 78 n.s 74.0 Weakly correlated
17 MIR 74 n.s 99.0 Weakly correlated
18 L2c 72 n.s 99.0 Weakly correlated
19 AluYc 71 **** 74.0 Weakly correlated
20 L2b 61 n.s 99.0 Weakly correlated
21 AluYh3 59 **** 15.2 Weakly correlated
22 AluSc8 57 n.s 74.0 Weakly correlated
23 AluYf1 47 **** 19.6 Weakly correlated
24 MIRc 46 n.s 99.0 Weakly correlated
25 AluSq 46 n.s 74.0 Weakly correlated
26 FLAM_C 45 n.s 74.0 Weakly correlated
27 L2 44 n.s 99.0 Weakly correlated
28 AluJr4 42 n.s 74.0 Weakly correlated
29 L1MB7 38 n.s 99.0 Weakly correlated
30 MIR3 34 n.s 99.0 Weakly correlated
31 AluYj4 33 **** 0.0 Weakly correlated
32 L1PA5 33 n.s 19.6 Weakly correlated
33 FRAM 32 n.s 74.0 Weakly correlated
34 LTR13 29 **** 19.6 Weakly correlated
35 AluSx4 28 n.s 74.0 Weakly correlated
36 AluSg7 25 n.s 74.0 Weakly correlated
37 L1MB8 23 n.s 99.0 Weakly correlated
38 AluSg4 21 n.s 74.0 Weakly correlated
39 L1MB3 17 n.s 99.0 Weakly correlated
40 L1PA6 17 n.s 28.9 Weakly correlated
41 Alu 17 **** 74.0 Weakly correlated
42 L1PA4 16 n.s 19.6 Weakly correlated
43 MLT1K 15 n.s 99.0 Weakly correlated
44 MLT1F 14 n.s 99.0 Weakly correlated
45 AluYk4 13 * 15.2 Weakly correlated
46 L1M5 13 n.s 99.0 Weakly correlated
47 AluYk2 13 ** 19.6 Weakly correlated
48 L1PA3 13 n.s 19.6 Weakly correlated
49 MSTB1 13 n.s 74.0 Weakly correlated
50 AluSc5 12 n.s 74.0 Weakly correlated
51 L1PB1 12 n.s 74.0 Weakly correlated
52 AluYe5 12 n.s 74.0 Weakly correlated
53 L3 11 n.s 99.0 Weakly correlated
54 L1PA7 11 n.s 74.0 Weakly correlated
55 LTR13_ 10 **** 28.9 Weakly correlated
56 L1ME1 10 n.s 99.0 Weakly correlated
57 L1M4 10 n.s 99.0 Weakly correlated
58 L1MEc 10 n.s 99.0 Weakly correlated
59 L1PA2 10 n.s 15.2 Weakly correlated
60 L1ME3A 10 n.s 99.0 Weakly correlated
61 AluYa5 9 n.s 15.2 Weakly correlated
62 THE1D 9 n.s 43.0 Weakly correlated
63 L1MB5 9 n.s 99.0 Weakly correlated
64 LTR16C 8 n.s 99.0 Weakly correlated
65 L1MC5a 8 n.s 99.0 Weakly correlated
66 L1MA9 8 n.s 99.0 Weakly correlated
67 AluYk3 8 n.s 19.6 Weakly correlated
68 MLT1C 8 n.s 94.0 Weakly correlated
69 MER51B 8 n.s 43.0 Weakly correlated
70 L1ME3G 7 n.s 99.0 Weakly correlated
71 MLT1H 7 n.s 99.0 Weakly correlated
72 MLT1J2 7 n.s 99.0 Weakly correlated
73 L1MEd 7 n.s 99.0 Weakly correlated
74 L3b 7 n.s 99.0 Weakly correlated
75 MLT1N2 7 n.s 99.0 Weakly correlated
76 SVA_D 7 n.s 15.2 Weakly correlated
77 LTR41 7 n.s 99.0 Weakly correlated
78 L1ME4b 7 n.s 99.0 Weakly correlated
79 L1PA13 7 n.s 74.0 Weakly correlated
80 FAM 7 n.s 87.0 Weakly correlated
81 MLT1F2 7 n.s 99.0 Weakly correlated
82 AluYh3a3 7 *** 15.2 Weakly correlated
83 L1ME2 7 n.s 99.0 Weakly correlated
84 L1ME3B 6 n.s 99.0 Weakly correlated
85 MLT1A1 6 n.s 87.0 Weakly correlated
86 L1MB2 6 n.s 99.0 Weakly correlated
87 L1ME3 6 n.s 99.0 Weakly correlated
88 MSTA 6 n.s 43.0 Weakly correlated
89 L1MB4 6 n.s 99.0 Weakly correlated
90 LTR16A2 6 n.s 99.0 Weakly correlated
91 AluYc3 6 n.s 74.0 Weakly correlated
92 L1PA15 6 n.s 74.0 Weakly correlated
93 MLT1A0 6 n.s 99.0 Weakly correlated
94 AluSq10 6 n.s 74.0 Weakly correlated
95 MamRep605 6 n.s 99.0 Weakly correlated
96 L1MC3 5 n.s 99.0 Weakly correlated
97 L1PA17 5 n.s 74.0 Weakly correlated
98 HERVH-int 5 n.s 28.9 Weakly correlated
99 MIR1_Amn 5 n.s 319.0 Weakly correlated
100 L1PA11 5 n.s 74.0 Weakly correlated
101 MSTB 5 n.s 43.0 Weakly correlated
102 HAL1 5 n.s 99.0 Weakly correlated
103 L1ME3Cz 5 n.s 99.0 Weakly correlated
104 L1PA10 5 n.s 74.0 Weakly correlated
105 LTR12C 5 n.s 19.6 Weakly correlated
106 L1MC1 4 n.s 99.0 Weakly correlated
107 MLT1H2 4 n.s 99.0 Weakly correlated
108 THE1B 4 n.s 43.0 Weakly correlated
109 FLAM_A 4 n.s 74.0 Weakly correlated
110 L1MD2 4 n.s 99.0 Weakly correlated
111 L1ME4a 4 n.s 99.0 Weakly correlated
112 L1ME4c 4 n.s 99.0 Weakly correlated
113 MLT1D 4 n.s 99.0 Weakly correlated
114 SVA_F 4 n.s 0.0 Weakly correlated
115 L1ME5 4 n.s 99.0 Weakly correlated
116 MLT1E1A 4 n.s 99.0 Weakly correlated
117 MLT1E3 4 n.s 99.0 Weakly correlated
118 MLT1J 4 n.s 99.0 Weakly correlated
119 L1MEf 4 n.s 99.0 Weakly correlated
120 LTR19C 4 * 43.0 Weakly correlated
121 LTR53 4 n.s 99.0 Weakly correlated
122 MER52A 4 n.s 74.0 Weakly correlated
123 MER61A 4 n.s 43.0 Weakly correlated
124 L1MC4 4 n.s 99.0 Weakly correlated
125 L1ME2z 4 n.s 99.0 Weakly correlated
126 MER4A1 4 n.s 74.0 Weakly correlated
127 THE1C 4 n.s 43.0 Weakly correlated
128 AluSq4 4 n.s 74.0 Weakly correlated
129 LTR16B2 4 n.s 99.0 Weakly correlated
130 MER9a1 4 n.s 19.6 Weakly correlated
131 MamRTE1 4 n.s 99.0 Weakly correlated
132 L1M1 3 n.s 74.0 Weakly correlated
133 L1PA8A 3 n.s 74.0 Weakly correlated
134 MER61C 3 n.s 43.0 Weakly correlated
135 MER77 3 n.s 99.0 Weakly correlated
136 L1M3 3 n.s 99.0 Weakly correlated
137 L1MA4 3 n.s 87.0 Weakly correlated
138 LTR16E1 3 n.s 99.0 Weakly correlated
139 MER68 3 n.s 99.0 Weakly correlated
140 MLT1I 3 n.s 99.0 Weakly correlated
141 L1MA2 3 n.s 74.0 Weakly correlated
142 L1PREC2 3 n.s 43.0 Weakly correlated
143 MamGypsy2-I 3 n.s 99.0 Weakly correlated
144 AluYa8 3 * 15.2 Weakly correlated
145 AluYg6 3 n.s 15.2 Weakly correlated
146 LTR88b 3 n.s 99.0 Weakly correlated
147 MLT1G3 3 n.s 99.0 Weakly correlated
148 MLT2B4 3 n.s 99.0 Weakly correlated
149 MLT2F 3 n.s 99.0 Weakly correlated
150 SVA_B 3 n.s 15.2 Weakly correlated
151 L1ME3F 3 n.s 99.0 Weakly correlated
152 L1PA16 3 n.s 74.0 Weakly correlated
153 L1PA8 3 n.s 74.0 Weakly correlated
154 AluYb9 3 n.s 15.2 Weakly correlated
155 AluYk11 3 n.s 15.2 Weakly correlated
156 LFSINE_Vert 3 n.s 319.0 Weakly correlated
157 MER31A 3 n.s 87.0 Weakly correlated
158 AluYe6 3 * 74.0 Weakly correlated
159 L1MC5 3 n.s 99.0 Weakly correlated
160 L1PB4 3 n.s 99.0 Weakly correlated
161 MLT1A 3 n.s 99.0 Weakly correlated
162 AluYi6 2 n.s 15.2 Weakly correlated
163 AmnSINE1 2 n.s 319.0 Weakly correlated
164 LTR16A1 2 n.s 99.0 Weakly correlated
165 LTR85b 2 n.s 99.0 Weakly correlated
166 LTR88c 2 n.s 99.0 Weakly correlated
167 MSTC 2 n.s 74.0 Weakly correlated
168 L1MD1 2 n.s 99.0 Weakly correlated
169 L1PBa1 2 n.s 74.0 Weakly correlated
170 LTR7C 2 n.s 28.9 Weakly correlated
171 HAL1M8 2 n.s 99.0 Weakly correlated
172 L1MC 2 n.s 99.0 Weakly correlated
173 L1ME3C 2 n.s 99.0 Weakly correlated
174 L1PB3 2 n.s 74.0 Weakly correlated
175 LTR1D1 2 n.s 43.0 Weakly correlated
176 LTR33 2 n.s 99.0 Weakly correlated
177 LTR52 2 n.s 99.0 Weakly correlated
178 LTR79 2 n.s 99.0 Weakly correlated
179 LTR85c 2 n.s 99.0 Weakly correlated
180 MER57B2 2 n.s 43.0 Weakly correlated
181 MLT1L 2 n.s 99.0 Weakly correlated
182 Plat_L3 2 n.s 99.0 Weakly correlated
183 CR1_Mam 2 n.s 99.0 Weakly correlated
184 L1PBa 2 n.s 74.0 Weakly correlated
185 LTR62 2 n.s 74.0 Weakly correlated
186 MER50 2 n.s 43.0 Weakly correlated
187 MER61E 2 n.s 43.0 Weakly correlated
188 MER67A 2 n.s 99.0 Weakly correlated
189 MER92B 2 n.s 99.0 Weakly correlated
190 MER9a2 2 n.s 19.6 Weakly correlated
191 MamGypLTR3 2 n.s 99.0 Weakly correlated
192 THE1C-int 2 n.s 43.0 Weakly correlated
193 L1MDa 2 n.s 99.0 Weakly correlated
194 LTR76 2 n.s 74.0 Weakly correlated
195 LTR8 2 n.s 43.0 Weakly correlated
196 MER41A 2 n.s 74.0 Weakly correlated
197 MER70B 2 n.s 87.0 Weakly correlated
198 HERVE_a-int 2 n.s 28.9 Weakly correlated
199 L4_A_Mam 2 n.s 99.0 Weakly correlated
200 LTR84b 2 n.s 99.0 Weakly correlated
201 MLT1B 2 n.s 99.0 Weakly correlated
202 MLT2D 2 n.s 99.0 Weakly correlated
203 L1MD 2 n.s 99.0 Weakly correlated
204 LTR18A 2 n.s 43.0 Weakly correlated
205 LTR2752 2 n.s 43.0 Weakly correlated
206 MER34A 2 n.s 99.0 Weakly correlated
207 MSTD 2 n.s 74.0 Weakly correlated
208 MamGypLTR3a 2 n.s 99.0 Weakly correlated
209 HAL1ME 2 n.s 99.0 Weakly correlated
210 HERV16-int 2 n.s 99.0 Weakly correlated
211 L1MA5 2 n.s 87.0 Weakly correlated
212 LTR16A 2 n.s 99.0 Weakly correlated
213 LTR33A 2 n.s 99.0 Weakly correlated
214 LTR45B 2 n.s 74.0 Weakly correlated
215 MER101 2 n.s 74.0 Weakly correlated
216 MER110A 2 n.s 99.0 Weakly correlated
217 MER21C 2 n.s 99.0 Weakly correlated
218 MLT1J1 2 n.s 99.0 Weakly correlated
219 MLT1M 2 n.s 99.0 Weakly correlated
220 SVA_C 2 n.s 15.2 Weakly correlated
221 HERV1_I-int 1 n.s 43.0 Weakly correlated
222 L1ME3E 1 n.s 99.0 Weakly correlated
223 L1P3 1 n.s 74.0 Weakly correlated
224 L1PA14 1 n.s 74.0 Weakly correlated
225 LTR41C 1 n.s 99.0 Weakly correlated
226 LTR5B 1 n.s 28.9 Weakly correlated
227 MER41-int 1 n.s 74.0 Weakly correlated
228 MER52D 1 n.s 74.0 Weakly correlated
229 MER61B 1 n.s 43.0 Weakly correlated
230 MER61F 1 n.s 43.0 Weakly correlated
231 MLT2C1 1 n.s 99.0 Weakly correlated
232 MamGypLTR1b 1 n.s 99.0 Weakly correlated
233 THE1A-int 1 n.s 43.0 Weakly correlated
234 THE1B-int 1 n.s 43.0 Weakly correlated
235 L1HS 1 n.s 8.6 Weakly correlated
236 L1M4c 1 n.s 99.0 Weakly correlated
237 LTR12_ 1 n.s 28.9 Weakly correlated
238 LTR1A2 1 n.s 43.0 Weakly correlated
239 LTR38B 1 n.s 74.0 Weakly correlated
240 LTR56 1 n.s 74.0 Weakly correlated
241 LTR60B 1 n.s 74.0 Weakly correlated
242 LTR81A 1 n.s 99.0 Weakly correlated
243 MER4D 1 n.s 74.0 Weakly correlated
244 MER57A1 1 n.s 43.0 Weakly correlated
245 MLT2B3 1 n.s 99.0 Weakly correlated
246 MLT2E 1 n.s 99.0 Weakly correlated
247 MamRep1527 1 n.s 99.0 Weakly correlated
248 SVA_E 1 n.s 0.0 Weakly correlated
249 THE1A 1 n.s 43.0 Weakly correlated
250 UCON86 1 * 319.0 Weakly correlated
251 ERV3-16A3_I-int 1 n.s 99.0 Weakly correlated
252 ERVL-B4-int 1 n.s 99.0 Weakly correlated
253 L1M4a2 1 n.s 99.0 Weakly correlated
254 L1MA10 1 n.s 99.0 Weakly correlated
255 L1MCc 1 n.s 99.0 Weakly correlated
256 L1PA12 1 n.s 74.0 Weakly correlated
257 LTR16D1 1 n.s 99.0 Weakly correlated
258 LTR16E2 1 n.s 99.0 Weakly correlated
259 LTR33B 1 n.s 99.0 Weakly correlated
260 LTR51 1 n.s 74.0 Weakly correlated
261 MER39 1 n.s 74.0 Weakly correlated
262 MER51A 1 n.s 43.0 Weakly correlated
263 MLT1G1 1 n.s 99.0 Weakly correlated
264 AluYb8 1 n.s 15.2 Weakly correlated
265 HERVIP10F-int 1 n.s 28.9 Weakly correlated
266 L1M4a1 1 n.s 99.0 Weakly correlated
267 L1MA6 1 n.s 87.0 Weakly correlated
268 L1MC2 1 n.s 99.0 Weakly correlated
269 L4_C_Mam 1 n.s 99.0 Weakly correlated
270 LTR108e_Mam 1 n.s 99.0 Weakly correlated
271 LTR1D 1 n.s 43.0 Weakly correlated
272 LTR37B 1 n.s 99.0 Weakly correlated
273 LTR55 1 n.s 99.0 Weakly correlated
274 LTR73 1 n.s 99.0 Weakly correlated
275 LTR8B 1 n.s 43.0 Weakly correlated
276 MER31-int 1 n.s 99.0 Weakly correlated
277 MER65-int 1 n.s 87.0 Weakly correlated
278 MLT1F1 1 n.s 99.0 Weakly correlated
279 MSTB2 1 n.s 74.0 Weakly correlated
280 SVA_A 1 n.s 19.6 Weakly correlated
281 HERVL-int 1 n.s 74.0 Weakly correlated
282 L1M2 1 n.s 99.0 Weakly correlated
283 L1MC4a 1 n.s 99.0 Weakly correlated
284 L2-3_Crp 1 n.s 431.0 Weakly correlated
285 LTR102_Mam 1 n.s 99.0 Weakly correlated
286 LTR103b_Mam 1 n.s 99.0 Weakly correlated
287 LTR104_Mam 1 n.s 99.0 Weakly correlated
288 LTR16B1 1 n.s 99.0 Weakly correlated
289 LTR7 1 n.s 19.6 Weakly correlated
290 MER49 1 n.s 43.0 Weakly correlated
291 MER4B 1 n.s 74.0 Weakly correlated
292 MER4C 1 n.s 74.0 Weakly correlated
293 MER65A 1 n.s 74.0 Weakly correlated
294 X7B_LINE 1 n.s 319.0 Weakly correlated
295 X9_LINE 1 n.s 319.0 Weakly correlated
296 HAL1b 1 n.s 99.0 Weakly correlated
297 HERV15-int 1 n.s 28.9 Weakly correlated
298 L1MEg 1 n.s 99.0 Weakly correlated
299 L1P2 1 n.s 28.9 Weakly correlated
300 LTR4 1 n.s 28.9 Weakly correlated
301 LTR40a 1 n.s 99.0 Weakly correlated
302 LTR41B 1 n.s 99.0 Weakly correlated
303 LTR48 1 n.s 74.0 Weakly correlated
304 LTR64 1 n.s 74.0 Weakly correlated
305 LTR82B 1 n.s 99.0 Weakly correlated
306 LTR85a 1 n.s 99.0 Weakly correlated
307 MER83 1 n.s 43.0 Weakly correlated
308 MLT1E2 1 n.s 99.0 Weakly correlated
309 MLT1G 1 n.s 99.0 Weakly correlated
310 MLT2B1 1 n.s 99.0 Weakly correlated
311 HERVK3-int 1 n.s 28.9 Weakly correlated
312 HUERS-P3-int 1 n.s 43.0 Weakly correlated
313 L1MEh 1 n.s 99.0 Weakly correlated
314 L1P3b 1 n.s 43.0 Weakly correlated
315 L1P4d 1 n.s 74.0 Weakly correlated
316 L1PA15-16 1 n.s 74.0 Weakly correlated
317 L1PB2 1 n.s 74.0 Weakly correlated
318 LTR18B 1 n.s 43.0 Weakly correlated
319 MER74A 1 n.s 99.0 Weakly correlated
320 MER90 1 n.s 99.0 Weakly correlated
321 Mam_R4 1 n.s 99.0 Weakly correlated
322 AluYh7 1 n.s 0.0 Weakly correlated
323 HERV1_LTRd 1 ** 43.0 Weakly correlated
324 HERV3-int 1 n.s 28.9 Weakly correlated
325 L1MA3 1 n.s 74.0 Weakly correlated
326 L1MCa 1 n.s 99.0 Weakly correlated
327 L1P4b 1 n.s 74.0 Weakly correlated
328 L1PBb 1 n.s 74.0 Weakly correlated
329 LTR13A 1 n.s 28.9 Weakly correlated
330 LTR2 1 n.s 28.9 Weakly correlated
331 LTR45C 1 n.s 99.0 Weakly correlated
332 MER11C 1 n.s 19.6 Weakly correlated
333 MER34A1 1 n.s 99.0 Weakly correlated
334 MER52C 1 n.s 74.0 Weakly correlated
335 MER57D 1 n.s 87.0 Weakly correlated
336 MER76 1 n.s 99.0 Weakly correlated
337 MER83C 1 n.s 43.0 Weakly correlated
338 MLT1A0-int 1 n.s 99.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUJO 74.0 Weakly correlated
2 ALUJR 74.0 Weakly correlated
3 ALUJR4 74.0 Weakly correlated
4 ALUSC 74.0 Weakly correlated
5 ALUSC5 74.0 Weakly correlated
6 ALUSG 74.0 Weakly correlated
7 ALUSG4 74.0 Weakly correlated
8 ALUSG7 74.0 Weakly correlated
9 ALUSP 74.0 Weakly correlated
10 ALUSQ 74.0 Weakly correlated
11 ALUSQ10 74.0 Weakly correlated
12 ALUSQ2 74.0 Weakly correlated
13 ALUSX 74.0 Weakly correlated
14 ALUSX1 74.0 Weakly correlated
15 ALUSX3 74.0 Weakly correlated
16 ALUSX4 74.0 Weakly correlated
17 ALUSZ 74.0 Weakly correlated
18 ALUYA5 15.2 Weakly correlated
19 ALUYE5 74.0 Weakly correlated
20 FLAM_C 74.0 Weakly correlated
21 L1M5 99.0 Weakly correlated
22 L1MB2 99.0 Weakly correlated
23 L1MB4 99.0 Weakly correlated
24 L1MB5 99.0 Weakly correlated
25 L1MB7 99.0 Weakly correlated
26 L1MB8 99.0 Weakly correlated
27 L1ME3 99.0 Weakly correlated
28 L1MEC 99.0 Weakly correlated
29 L1MED 99.0 Weakly correlated
30 L1PA13 74.0 Weakly correlated
31 L1PA15 74.0 Weakly correlated
32 L1PA7 74.0 Weakly correlated
33 L2B 99.0 Weakly correlated
34 L3 99.0 Weakly correlated
35 LTR13 19.6 Weakly correlated
36 LTR13_ 28.9 Weakly correlated
37 LTR16C 99.0 Weakly correlated
38 MER51B 43.0 Weakly correlated
39 MLT1F 99.0 Weakly correlated
40 MSTB1 74.0 Weakly correlated
41 SVA_D 15.2 Weakly correlated
42 THE1D 43.0 Weakly correlated