L1M1_5END — repeat · ZRdb — KZFP & Repeats Database

LINE_L1M1_5END

Name

L1M1_5END
Repbase

L1M1_5
Type

LINE
Emergence

74.0 Mya
Dfam Id

DF0000227

Description :

5' end of L1M1 LINE1 elements associated with L1MA1 to L1MA3 subfamily3' UTRs. ORF1 is from pos 2040-3023, ORF2 starts at 3529.

Consensus sequence :

aagtggtgattagagggaggcggagcaagatggcngaatagaagnctccaccgatcgtccatcctccccgcaggaacaccaaatttaacaactatctacacaaaaaagcaccttcataagaaccaaaaatcaggtgagcantcacagtacctggttttaacttcatatcgctgaaagaggcactgaagagggtaggaaagacagtcttgaatcgccgacgccacccctcccccatcccccggcagcggccgcgtggcgcggagagagaatctgtgcgcttgggggagggagagcgcagcgattgtgggactttgcattggaactcagtgctgccctgtcacagcggaaagcaaaaccgggccgaactcagccggcgcccacggagggagcatttagaccagccctagccagaggggaatcgcccatcccagcggtcggaacttgagttccggcaagcctcgccaccgcgggctaaagtgctctggggccctaaataaacttgaaaggcagtctaggccacaaggactgcaactcctaggcgagtcctagtgctgngctgggctcagagccagtggacttggggggcacgcgacctantgagacaccagccggggcggccaagggagtgcttgcgtcacccctcccccaaccccaggcngcgcagctcgcggctccaaaagagaccccttccttccgcttgaggagaggagagggaagagtaaagaggactttgtcttgcatcttggataccagctcagccacagcaggatagggcaccggncagagtcgtgaggcccccattccaggccctagctcccggacgacatttctagacacaccctgggccagaagggaacccgctgccttgaagggaaggacccagtcctggcaggattcatcacctgctgactaaagagcccttgggccctgaataaccagcagcgatacccaggtagtacncgccgngggccttgggtgagactctgagacntgctggcttcaggtgngacccagcacattcccagctgtggtggctacggggagagactccttctgcttgagaaaagcagagggaaaagtaaaggggactttgtcttgcaccttaggtaccagctcggccacagtggggtagagcaccaagcgggctcttggggtccccgattccaggccttggctcttggacggcatttctggacctgccctgggccagaggggagcccactgccctgaagggtgagtcccaggccnggcagcattcaccacaagctgactgaagagcccttgggccttaagngaacatcggcggtagcctggcagtactccccgtgggcctgnggtggtggtggccacggggngaggctcctctgcctgtggaaaggggagggaagagtgggaaggactncgtcttgtggtttgagtgccagctcagccgcagtanaatagaacaccaggtagatttctaaggtttttgactccagtccctggctcccggacggcatctctggacccgcccggggcctgggggaactcgccgccctgaagggaaggacacaagcctggctggcttcgccacctgctgattgtagagccccagggccttgagcgaacataggcggtagccaggnagtggttacagcgggccttgggcgagacccagtgctgtgctggcttcaggtctgacccagcgcagtcccagtggtggtggccacaggggtgcttgtgtcaccccncccccagctccaggcggctcagnacagagagagagactccgtttgtttgggagaaagtaagggaagagaacaagagtctctgcctggtaatccagagaattcttccggatcttatccaagaccaccaaggcggtacctctacgagtctgcaagaaccacagcgttactgggcttggggtgccccctaangcagatacggctncgncgnncgnnnncttagatcacaacacccaagtcccttcgaatacctggaaagccttcccaagaaggacgggtacaaacaagcccagactgcgaagactacaataaatacctaactcttcaatgcccagacaccgacgaacatccacaagcatcaagaccatccaggaaaacatgacctcaccaaatgaactaaataaggcaccagggaccaatcctggagaaacagagatatgtgacctttcagacagagaattcaaaatagctgttttgaggaaactcaaagaaattcaagataacacagagaaggaattcagaattctatcagataaatttaacaaagagattgaaataattaaaaagaatcaagcagaaattctggagctgaaaaatgcaattgacatactgaagaatgcatcagagtctcttaatagcagaattgatcaagcagaagaaagaattagtgagcttgaagacaggctatttgaaaatacacagtcagaggagacaaaagaaaaaagaataaaaaanaatgaagcacgcctacaggatctagaaaatagcctcaaaagggcaaatctaagagttattggccttaaagaggaggtagagaaagagataggggtagaaagtttattcaaagggataataacagagaacttcccaaacctagagaaagatatcaatatccaagtacaagaaggttatagaacaccaagcagatttaacccaaagaagactacctcaaggcatttaataatcaaactcccaaaggtcaaggataaagaaaggatcctaaaagcagcaagagaaaagaaacaaataacatacaatggagctccaatacgtctggcagcagacttttcagtggaaaccttacaggccaggagagagtggcatgacatatttaaagtgctgaaggaaaaaaacttttaccctagaatagtatatccggcgaaaatatccttcaaacatgaaggagaaataaagactttcccagacaaacaaaagctgagggatttcatcaacaccagacctgtcctacaagaaatgctaaagggagtncttcaatcngaaagaaaaggacgttaatgagcaataagaaatcatctgaaggtacaaaactcactggtaatagtaagtacacagaaaaacacagaatattataacactgtaactgtggtgtgtaaactactcntatcttaagtagaaagactaaangatgaaccaatcaaaaataataactacaacaacttttcaagacatagacagtacaataagatataaatagaaacaacaaaaagttaaaaagcggggggacgaagttaaagcgtagagtttttattagttttctttttgcttgtttgtttatgcaancagtgttaagttgtcatcagtttaaaataatgggttataagatagtatttgcaagcctcatggtaacctcaaatcaaaaaacatacaacggatacacaaaaaataaaaagcaagaaattaaancataccaccagagaaaatcaccttcactaaaaggaagacaggaaggaaggaaagaaggaagagaagaccacaaaacaaccagaaaacaaataacaaaatggcaggagtaagtccttacttatcaataataacattgaatgtaaatggactaaactctccaatcaaaagacatagagtggctgaatggataaaaaaacaagacccaatgatctgttgcctacaagaaacacacttcacctataaa

Repeats structure :

Peak overlapping :

#	KZFP name	Record number	KZFP age(Mya)	Time correlation with Repeats
1	ZNF382	1176	99.0	Weakly correlated
2	ZNF490	560	43.0	Weakly correlated
3	ZNF160	368	74.0	Highly correlated
4	ZNF471	313	94.0	Weakly correlated
5	ZNF680	299	28.9	Weakly correlated
6	ZIM3	270	87.0	Weakly correlated
7	ZNF317	248	99.0	Weakly correlated
8	ZNF793	226	99.0	Weakly correlated
9	ZNF136	210	74.0	Highly correlated
10	ZNF425	148	94.0	Weakly correlated
11	ZNF263	145	180.0	Weakly correlated
12	ZNF534	127	19.6	Weakly correlated
13	ZNF563	126	28.9	Weakly correlated
14	ZNF705B	111	28.9	Weakly correlated
15	ZNF679	102	28.9	Weakly correlated
16	ZNF766	100	43.0	Weakly correlated
17	ZNF248	96	99.0	Weakly correlated
18	ZNF92	90	28.9	Weakly correlated
19	ZNF705D	78	28.9	Weakly correlated
20	ZNF394	69	99.0	Weakly correlated
21	ZFP37	56	99.0	Weakly correlated
22	ZNF2	53	99.0	Weakly correlated
23	ZNF879	47	99.0	Weakly correlated
24	ZNF324	46	99.0	Weakly correlated
25	ZNF479	44	6.4	Weakly correlated
26	ZNF274	43	99.0	Weakly correlated
27	ZNF723	40	15.2	Weakly correlated
28	ZKSCAN1	38	160.0	Weakly correlated
29	ZNF251	38	94.0	Weakly correlated
30	ZNF133	36	99.0	Weakly correlated
31	ZNF101	35	43.0	Weakly correlated
32	ZNF701	34	28.9	Weakly correlated
33	ZNF18	33	160.0	Weakly correlated
34	ZNF33A	33	99.0	Weakly correlated
35	ZNF486	33	8.6	Weakly correlated
36	ZNF558	33	99.0	Weakly correlated
37	ZNF554	32	99.0	Weakly correlated
38	ZNF677	25	99.0	Weakly correlated
39	ZNF880	25	28.9	Weakly correlated
40	ZNF610	24	28.9	Weakly correlated
41	ZFP69B	23	99.0	Weakly correlated
42	ZNF169	23	94.0	Weakly correlated
43	ZNF75D	23	94.0	Weakly correlated
44	ZNF175	22	94.0	Weakly correlated
45	ZNF429	22	28.9	Weakly correlated
46	ZNF41	20	99.0	Weakly correlated
47	ZFP57	19	87.0	Weakly correlated
48	ZNF257	19	0.0	Weakly correlated
49	ZNF547	19	74.0	Highly correlated
50	ZNF597	19	94.0	Weakly correlated
51	ZNF287	18	99.0	Weakly correlated
52	ZNF589	18	28.9	Weakly correlated
53	ZNF182	17	99.0	Weakly correlated
54	ZNF230	17	28.9	Weakly correlated
55	ZNF485	17	94.0	Weakly correlated
56	ZNF506	17	28.9	Weakly correlated
57	ZNF585A	17	99.0	Weakly correlated
58	ZKSCAN8	16	160.0	Weakly correlated
59	ZNF197	16	99.0	Weakly correlated
60	ZNF320	16	28.9	Weakly correlated
61	ZNF354A	16	99.0	Weakly correlated
62	ZNF786	16	99.0	Weakly correlated
63	ZNF140	14	99.0	Weakly correlated
64	ZNF584	14	99.0	Weakly correlated
65	ZNF585B	14	99.0	Weakly correlated
66	ZNF250	13	99.0	Weakly correlated
67	ZNF84	13	99.0	Weakly correlated
68	ZNF792	12	94.0	Weakly correlated
69	ZNF28	11	28.9	Weakly correlated
70	ZNF528	11	43.0	Weakly correlated
71	ZNF8	10	99.0	Weakly correlated
72	ZNF202	9	160.0	Weakly correlated
73	ZNF519	9	19.6	Weakly correlated
74	ZNF284	8	43.0	Weakly correlated
75	ZNF337	8	43.0	Weakly correlated
76	ZNF549	8	87.0	Weakly correlated
77	ZNF641	8	99.0	Weakly correlated
78	ZNF707	8	74.0	Highly correlated
79	ZFP28	7	99.0	Weakly correlated
80	ZNF264	7	99.0	Weakly correlated
81	ZNF441	7	43.0	Weakly correlated
82	ZNF735	7	28.9	Weakly correlated
83	ZNF778	7	74.0	Highly correlated
84	ZNF141	6	43.0	Weakly correlated
85	ZNF222	6	43.0	Weakly correlated
86	ZNF483	6	99.0	Weakly correlated
87	ZNF671	6	94.0	Weakly correlated
88	ZNF674	6	99.0	Weakly correlated
89	ZFP69	5	99.0	Weakly correlated
90	ZFP90	5	99.0	Weakly correlated
91	ZNF282	5	319.0	Weakly correlated
92	ZNF30	5	94.0	Weakly correlated
93	ZNF334	5	99.0	Weakly correlated
94	ZNF440	5	28.9	Weakly correlated
95	ZNF468	5	28.9	Weakly correlated
96	ZNF823	5	43.0	Weakly correlated
97	ZFP82	4	99.0	Weakly correlated
98	ZNF114	4	28.9	Weakly correlated
99	ZNF26	4	99.0	Weakly correlated
100	ZNF273	4	28.9	Weakly correlated
101	ZNF331	4	94.0	Weakly correlated
102	ZNF560	4	43.0	Weakly correlated
103	ZNF682	4	28.9	Weakly correlated
104	ZNF695	4	28.9	Weakly correlated
105	ZNF780A	4	43.0	Weakly correlated
106	ZFP30	3	99.0	Weakly correlated
107	ZNF354C	3	99.0	Weakly correlated
108	ZNF43	3	43.0	Weakly correlated
109	ZNF44	3	43.0	Weakly correlated
110	ZNF570	3	99.0	Weakly correlated
111	ZNF596	3	94.0	Weakly correlated
112	ZNF669	3	43.0	Weakly correlated
113	ZNF730	3	19.6	Weakly correlated
114	ZNF736	3	43.0	Weakly correlated
115	ZNF765	3	8.6	Weakly correlated
116	ZNF845	3	28.9	Weakly correlated
117	ZNF91	3	6.0	Weakly correlated
118	ZNF10	2	99.0	Weakly correlated
119	ZNF135	2	94.0	Weakly correlated
120	ZNF180	2	99.0	Weakly correlated
121	ZNF189	2	99.0	Weakly correlated
122	ZNF211	2	94.0	Weakly correlated
123	ZNF304	2	99.0	Weakly correlated
124	ZNF347	2	43.0	Weakly correlated
125	ZNF445	2	99.0	Weakly correlated
126	ZNF454	2	99.0	Weakly correlated
127	ZNF510	2	99.0	Weakly correlated
128	ZNF555	2	94.0	Weakly correlated
129	ZNF567	2	99.0	Weakly correlated
130	ZNF587	2	28.9	Weakly correlated
131	ZNF607	2	43.0	Weakly correlated
132	ZNF665	2	28.9	Weakly correlated
133	ZNF681	2	28.9	Weakly correlated
134	ZNF689	2	99.0	Weakly correlated
135	ZNF75A	2	94.0	Weakly correlated
136	ZNF808	2	19.6	Weakly correlated
137	ZNF816	2	28.9	Weakly correlated
138	ZNF81	2	99.0	Weakly correlated
139	ZNF93	2	8.6	Weakly correlated
140	ZFP14	1	99.0	Weakly correlated
141	ZFP1	1	99.0	Weakly correlated
142	ZKSCAN5	1	160.0	Weakly correlated
143	ZNF100	1	28.9	Weakly correlated
144	ZNF124	1	43.0	Weakly correlated
145	ZNF132	1	94.0	Weakly correlated
146	ZNF157	1	99.0	Weakly correlated
147	ZNF177	1	94.0	Weakly correlated
148	ZNF17	1	69.0	Moderately correlated
149	ZNF212	1	160.0	Weakly correlated
150	ZNF224	1	69.0	Moderately correlated
151	ZNF225	1	74.0	Highly correlated
152	ZNF253	1	19.6	Weakly correlated
153	ZNF33B	1	99.0	Weakly correlated
154	ZNF350	1	99.0	Weakly correlated
155	ZNF354B	1	99.0	Weakly correlated
156	ZNF430	1	19.6	Weakly correlated
157	ZNF432	1	99.0	Weakly correlated
158	ZNF480	1	43.0	Weakly correlated
159	ZNF529	1	99.0	Weakly correlated
160	ZNF561	1	43.0	Weakly correlated
161	ZNF562	1	28.9	Weakly correlated
162	ZNF582	1	99.0	Weakly correlated
163	ZNF583	1	99.0	Weakly correlated
164	ZNF586	1	43.0	Weakly correlated
165	ZNF587B	1	8.6	Weakly correlated
166	ZNF595	1	43.0	Weakly correlated
167	ZNF605	1	99.0	Weakly correlated
168	ZNF611	1	19.6	Weakly correlated
169	ZNF613	1	99.0	Weakly correlated
170	ZNF616	1	43.0	Weakly correlated
171	ZNF649	1	28.9	Weakly correlated
172	ZNF667	1	99.0	Weakly correlated
173	ZNF675	1	8.6	Weakly correlated
174	ZNF700	1	28.9	Weakly correlated
175	ZNF705E	1	0.0	Weakly correlated
176	ZNF716	1	19.6	Weakly correlated
177	ZNF761	1	19.6	Weakly correlated
178	ZNF763	1	15.2	Weakly correlated
179	ZNF780B	1	74.0	Highly correlated
180	ZNF789	1	99.0	Weakly correlated
181	ZNF790	1	99.0	Weakly correlated
182	ZNF791	1	87.0	Weakly correlated
183	ZNF846	1	74.0	Highly correlated
184	ZNF850	1	28.9	Weakly correlated

KZFPs Motif in Repeats :

#	KZFP name	Record number	KZFP age(Mya)	Time correlation with Repeats
1	ZNF490	523	43.0	Weakly correlated
2	ZNF160	350	74.0	Highly correlated
3	ZNF471	293	94.0	Weakly correlated
4	ZNF382	240	99.0	Weakly correlated
5	ZIM3	174	87.0	Weakly correlated
6	ZNF136	168	74.0	Highly correlated
7	ZNF793	139	99.0	Weakly correlated
8	ZNF563	120	28.9	Weakly correlated
9	ZNF680	102	28.9	Weakly correlated
10	ZNF534	100	19.6	Weakly correlated
11	ZNF317	98	99.0	Weakly correlated
12	ZNF248	89	99.0	Weakly correlated
13	ZNF425	51	94.0	Weakly correlated
14	ZNF263	44	180.0	Weakly correlated
15	ZNF879	40	99.0	Weakly correlated
16	ZNF723	27	15.2	Weakly correlated
17	ZNF705B	27	28.9	Weakly correlated
18	ZNF677	23	99.0	Weakly correlated
19	ZNF705D	22	28.9	Weakly correlated
20	ZNF101	21	43.0	Weakly correlated
21	ZNF133	17	99.0	Weakly correlated
22	ZNF33A	16	99.0	Weakly correlated
23	ZNF324	16	99.0	Weakly correlated
24	ZNF701	15	28.9	Weakly correlated
25	ZNF429	15	28.9	Weakly correlated
26	ZNF479	13	6.4	Weakly correlated
27	ZNF354A	12	99.0	Weakly correlated
28	ZNF585A	12	99.0	Weakly correlated
29	ZNF250	12	99.0	Weakly correlated
30	ZNF287	12	99.0	Weakly correlated
31	ZNF75D	12	94.0	Weakly correlated
32	ZNF679	10	28.9	Weakly correlated
33	ZNF485	10	94.0	Weakly correlated
34	ZNF140	9	99.0	Weakly correlated
35	ZNF2	9	99.0	Weakly correlated
36	ZNF597	9	94.0	Weakly correlated
37	ZNF169	8	94.0	Weakly correlated
38	ZNF84	7	99.0	Weakly correlated
39	ZNF92	7	28.9	Weakly correlated
40	ZNF766	7	43.0	Weakly correlated
41	ZNF786	7	99.0	Weakly correlated
42	ZNF28	7	28.9	Weakly correlated
43	ZNF337	7	43.0	Weakly correlated
44	ZFP57	6	87.0	Weakly correlated
45	ZNF880	6	28.9	Weakly correlated
46	ZNF558	6	99.0	Weakly correlated
47	ZNF257	6	0.0	Weakly correlated
48	ZNF320	5	28.9	Weakly correlated
49	ZNF202	5	160.0	Weakly correlated
50	ZNF735	5	28.9	Weakly correlated
51	ZNF506	5	28.9	Weakly correlated
52	ZNF264	5	99.0	Weakly correlated
53	ZFP82	4	99.0	Weakly correlated
54	ZFP90	4	99.0	Weakly correlated
55	ZNF251	4	94.0	Weakly correlated
56	ZNF549	4	87.0	Weakly correlated
57	ZNF707	4	74.0	Highly correlated
58	ZNF468	4	28.9	Weakly correlated
59	ZNF554	4	99.0	Weakly correlated
60	ZNF780A	4	43.0	Weakly correlated
61	ZNF610	4	28.9	Weakly correlated
62	ZFP69	3	99.0	Weakly correlated
63	ZNF18	3	160.0	Weakly correlated
64	ZNF596	3	94.0	Weakly correlated
65	ZNF641	3	99.0	Weakly correlated
66	ZNF674	3	99.0	Weakly correlated
67	ZNF483	3	99.0	Weakly correlated
68	ZNF792	3	94.0	Weakly correlated
69	ZNF282	3	319.0	Weakly correlated
70	ZNF44	3	43.0	Weakly correlated
71	ZNF519	3	19.6	Weakly correlated
72	ZNF440	3	28.9	Weakly correlated
73	ZNF589	3	28.9	Weakly correlated
74	ZFP28	2	99.0	Weakly correlated
75	ZNF274	2	99.0	Weakly correlated
76	ZNF486	2	8.6	Weakly correlated
77	ZNF587	2	28.9	Weakly correlated
78	ZNF823	2	43.0	Weakly correlated
79	ZNF175	2	94.0	Weakly correlated
80	ZNF41	2	99.0	Weakly correlated
81	ZNF81	2	99.0	Weakly correlated
82	ZNF331	2	94.0	Weakly correlated
83	ZNF528	2	43.0	Weakly correlated
84	ZNF671	2	94.0	Weakly correlated
85	ZFP1	1	99.0	Weakly correlated
86	ZFP37	1	99.0	Weakly correlated
87	ZKSCAN1	1	160.0	Weakly correlated
88	ZKSCAN5	1	160.0	Weakly correlated
89	ZNF10	1	99.0	Weakly correlated
90	ZNF132	1	94.0	Weakly correlated
91	ZNF141	1	43.0	Weakly correlated
92	ZNF334	1	99.0	Weakly correlated
93	ZNF586	1	43.0	Weakly correlated
94	ZNF30	1	94.0	Weakly correlated
95	ZNF667	1	99.0	Weakly correlated
96	ZNF736	1	43.0	Weakly correlated
97	ZNF212	1	160.0	Weakly correlated
98	ZNF222	1	43.0	Weakly correlated
99	ZNF230	1	28.9	Weakly correlated
100	ZNF394	1	99.0	Weakly correlated
101	ZNF584	1	99.0	Weakly correlated
102	ZNF189	1	99.0	Weakly correlated
103	ZNF347	1	43.0	Weakly correlated
104	ZNF454	1	99.0	Weakly correlated
105	ZNF816	1	28.9	Weakly correlated
106	ZNF197	1	99.0	Weakly correlated
107	ZNF567	1	99.0	Weakly correlated
108	ZNF211	1	94.0	Weakly correlated
109	ZNF350	1	99.0	Weakly correlated
110	ZNF716	1	19.6	Weakly correlated

KZFPs Motif in Repeats Consensus :

#	KZFP name	KZFP age(Mya)	Time correlation with Repeats
1	ZFP57	87.0	Weakly correlated
2	ZIM3	87.0	Weakly correlated
3	ZNF133	99.0	Weakly correlated
4	ZNF169	94.0	Weakly correlated
5	ZNF248	99.0	Weakly correlated
6	ZNF257	0.0	Weakly correlated
7	ZNF263	180.0	Weakly correlated
8	ZNF287	99.0	Weakly correlated
9	ZNF28	28.9	Weakly correlated
10	ZNF2	99.0	Weakly correlated
11	ZNF317	99.0	Weakly correlated
12	ZNF337	43.0	Weakly correlated
13	ZNF382	99.0	Weakly correlated
14	ZNF425	94.0	Weakly correlated
15	ZNF471	94.0	Weakly correlated
16	ZNF490	43.0	Weakly correlated
17	ZNF585A	99.0	Weakly correlated
18	ZNF597	94.0	Weakly correlated
19	ZNF677	99.0	Weakly correlated
20	ZNF680	28.9	Weakly correlated
21	ZNF701	28.9	Weakly correlated
22	ZNF705B	28.9	Weakly correlated
23	ZNF75D	94.0	Weakly correlated
24	ZNF786	99.0	Weakly correlated
25	ZNF793	99.0	Weakly correlated
26	ZNF880	28.9	Weakly correlated
27	ZNF92	28.9	Weakly correlated