ZRdb KZFP & Repeats
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Human_ZNF558

  • Protein
    Zinc finger protein 558
  • Length
    402
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    99.0 Mya
  • Uniprot_ID
    Q96NG5
  • NCBI_ID
    148156
Sequence:
MAAVILPSTAAPSSLFPASQQKGHTQGGELVNELLTSWLRGLVTFEDVAVEFTQEEWALLDPAQRTLYRDVMLENCRNLASLGCRVNKPSLISQLEQDKKVVTEERGILPSTCPDLETLLKAKWLTPKKNVFRKEQSKGVKTERSHRGVKLNECNQCFKVFSTKSNLTQHKRIHTGEKPYDCSQCGKSFSSRSYLTIHKRIHNGEKPYECNHCGKAFSDPSSLRLHLRIHTGEKPYECNQCFHVFRTSCNLKSHKRIHTGENHHECNQCGKAFSTRSSLTGHNSIHTGEKPYECHDCGKTFRKSSYLTQHVRTHTGEKPYECNECGKSFSSSFSLTVHKRIHTGEKPYECSDCGKAFNNLSAVKKHLRTHTGEKPYECNHCGKSFTSNSYLSVHKRIHNRWI
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
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# Domain name Pos
1 KRAB 43..114
2 C2h2 152..174
3 C2h2 180..202
4 C2h2 208..230
5 C2h2 236..258
6 C2h2 264..286
7 C2h2 292..314
8 C2h2 320..342
9 C2h2 348..370
10 C2h2 376..398
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific
4 Molecular Function metal ion binding
5 Molecular Function RNA polymerase II transcription regulatory region sequence-specific DNA binding
6 Biological Process negative regulation of transcription by RNA polymerase II
7 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 864 **** 99.0 Highly correlated
2 AluSx1 821 **** 74.0 Weakly correlated
3 AluSx 734 **** 74.0 Weakly correlated
4 AluJb 688 **** 74.0 Weakly correlated
5 L2a 685 **** 99.0 Highly correlated
6 AluY 629 **** 74.0 Weakly correlated
7 AluSz 594 **** 74.0 Weakly correlated
8 MIR 563 **** 99.0 Highly correlated
9 L2c 477 **** 99.0 Highly correlated
10 L1MEg 448 **** 99.0 Highly correlated
11 MIRc 416 **** 99.0 Highly correlated
12 AluJo 401 **** 74.0 Weakly correlated
13 AluJr 399 **** 74.0 Weakly correlated
14 L2b 391 **** 99.0 Highly correlated
15 MIR3 364 **** 99.0 Highly correlated
16 L1M4 360 **** 99.0 Highly correlated
17 AluSp 354 **** 74.0 Weakly correlated
18 AluSq2 348 **** 74.0 Weakly correlated
19 L1MEd 345 **** 99.0 Highly correlated
20 L1PB1 313 **** 74.0 Weakly correlated
21 L1MEf 286 **** 99.0 Highly correlated
22 L2 276 **** 99.0 Highly correlated
23 L1MCa 267 **** 99.0 Highly correlated
24 AluSx3 248 **** 74.0 Weakly correlated
25 AluSg 234 **** 74.0 Weakly correlated
26 AluSz6 230 **** 74.0 Weakly correlated
27 AluSc 218 **** 74.0 Weakly correlated
28 L1M4c 210 **** 99.0 Highly correlated
29 L1MDa 196 **** 99.0 Highly correlated
30 L1MEc 196 **** 99.0 Highly correlated
31 MLT1C 165 **** 94.0 Weakly correlated
32 L3 145 **** 99.0 Highly correlated
33 L1MB7 142 *** 99.0 Highly correlated
34 AluSq 129 **** 74.0 Weakly correlated
35 L1ME1 127 n.s 99.0 Highly correlated
36 L1MB3 123 **** 99.0 Highly correlated
37 L1M5 121 n.s 99.0 Highly correlated
38 FLAM_C 117 **** 74.0 Weakly correlated
39 AluSc8 115 **** 74.0 Weakly correlated
40 HAL1 110 ** 99.0 Highly correlated
41 L1MC4 106 * 99.0 Highly correlated
42 L1MB4 104 **** 99.0 Highly correlated
43 L1PA13 99 * 74.0 Weakly correlated
44 L1PREC2 99 **** 43.0 Weakly correlated
45 L1MB5 88 **** 99.0 Highly correlated
46 L1MB8 84 n.s 99.0 Highly correlated
47 L1PA15 84 n.s 74.0 Weakly correlated
48 L1MC1 78 n.s 99.0 Highly correlated
49 L1MCc 78 **** 99.0 Highly correlated
50 AluJr4 77 **** 74.0 Weakly correlated
51 L1MD2 77 *** 99.0 Highly correlated
52 MLT1B 76 *** 99.0 Highly correlated
53 AluSx4 73 **** 74.0 Weakly correlated
54 L1ME4a 72 n.s 99.0 Highly correlated
55 L1PA2 72 n.s 15.2 Weakly correlated
56 L1ME3A 71 n.s 99.0 Highly correlated
57 L1PA14 66 **** 74.0 Weakly correlated
58 L1ME3Cz 65 **** 99.0 Highly correlated
59 L1ME3G 65 *** 99.0 Highly correlated
60 L1ME2 64 n.s 99.0 Highly correlated
61 MIR1_Amn 62 **** 319.0 Weakly correlated
62 MLT1D 61 n.s 99.0 Highly correlated
63 L1PA3 59 n.s 19.6 Weakly correlated
64 AluSg7 58 **** 74.0 Weakly correlated
65 L1PA7 57 n.s 74.0 Weakly correlated
66 FLAM_A 56 **** 74.0 Weakly correlated
67 FRAM 56 **** 74.0 Weakly correlated
68 L1MC5a 56 n.s 99.0 Highly correlated
69 MLT1A0 56 n.s 99.0 Highly correlated
70 L1MB2 55 ** 99.0 Highly correlated
71 L1MD1 55 * 99.0 Highly correlated
72 L1PA11 55 * 74.0 Weakly correlated
73 MLT1K 55 * 99.0 Highly correlated
74 MLT1H 53 **** 99.0 Highly correlated
75 MamRTE1 53 **** 99.0 Highly correlated
76 L1MC3 52 n.s 99.0 Highly correlated
77 MLT1J 50 * 99.0 Highly correlated
78 L1ME4b 49 n.s 99.0 Highly correlated
79 L3b 49 **** 99.0 Highly correlated
80 L1MA9 48 n.s 99.0 Highly correlated
81 MER4E1 48 **** 74.0 Weakly correlated
82 L1ME3B 47 ** 99.0 Highly correlated
83 L1PA10 45 n.s 74.0 Weakly correlated
84 L1PA4 45 n.s 19.6 Weakly correlated
85 L1PA8 44 n.s 74.0 Weakly correlated
86 L1M4b 43 *** 99.0 Highly correlated
87 L1PA16 43 n.s 74.0 Weakly correlated
88 AluYj4 42 **** 0.0 Weakly correlated
89 MLT1I 42 *** 99.0 Highly correlated
90 AluSg4 40 *** 74.0 Weakly correlated
91 L1MA4 40 n.s 87.0 Weakly correlated
92 L1ME3 40 n.s 99.0 Highly correlated
93 L1PA5 40 n.s 19.6 Weakly correlated
94 AluSc5 39 **** 74.0 Weakly correlated
95 L1M4a1 39 **** 99.0 Highly correlated
96 AmnSINE1 37 **** 319.0 Weakly correlated
97 THE1B 37 n.s 43.0 Weakly correlated
98 L1M2 36 n.s 99.0 Highly correlated
99 Alu 35 **** 74.0 Weakly correlated
100 LTR8 35 **** 43.0 Weakly correlated
101 MLT1L 35 * 99.0 Highly correlated
102 L1MD 34 n.s 99.0 Highly correlated
103 AluYm1 33 **** 19.6 Weakly correlated
104 L1M1 33 n.s 74.0 Weakly correlated
105 L1MC2 32 n.s 99.0 Highly correlated
106 L1MC5 32 n.s 99.0 Highly correlated
107 AluYc 31 **** 74.0 Weakly correlated
108 LTR12C 31 n.s 19.6 Weakly correlated
109 SVA_D 31 ** 15.2 Weakly correlated
110 L1M4a2 29 **** 99.0 Highly correlated
111 L1MCb 29 **** 99.0 Highly correlated
112 L1ME2z 29 n.s 99.0 Highly correlated
113 MSTB1 29 ** 74.0 Weakly correlated
114 ERVL-E-int 28 n.s 99.0 Highly correlated
115 L1PB2 27 n.s 74.0 Weakly correlated
116 L4_A_Mam 27 ** 99.0 Highly correlated
117 L1MA3 26 n.s 74.0 Weakly correlated
118 L1ME4c 26 * 99.0 Highly correlated
119 L1PA6 26 n.s 28.9 Weakly correlated
120 MamSINE1 26 **** 99.0 Highly correlated
121 L1MC4a 25 n.s 99.0 Highly correlated
122 L1ME3F 25 * 99.0 Highly correlated
123 HUERS-P3-int 24 **** 43.0 Weakly correlated
124 L1MA5 24 n.s 87.0 Weakly correlated
125 L1PBa 24 n.s 74.0 Weakly correlated
126 LTR13 24 **** 19.6 Weakly correlated
127 MLT1J2 24 * 99.0 Highly correlated
128 ERV3-16A3_I-int 23 n.s 99.0 Highly correlated
129 HAL1ME 23 n.s 99.0 Highly correlated
130 L1MA7 23 n.s 87.0 Weakly correlated
131 L1MD3 23 n.s 99.0 Highly correlated
132 LTR8B 23 **** 43.0 Weakly correlated
133 MER4-int 23 n.s 74.0 Weakly correlated
134 MLT1F 23 * 99.0 Highly correlated
135 MSTA 23 n.s 43.0 Weakly correlated
136 LTR10A 22 **** 28.9 Weakly correlated
137 MLT1F2 22 n.s 99.0 Highly correlated
138 THE1C 22 n.s 43.0 Weakly correlated
139 L1MA4A 21 n.s 87.0 Weakly correlated
140 L1P3 21 n.s 74.0 Weakly correlated
141 L1PB4 21 n.s 99.0 Highly correlated
142 LTR9 21 **** 43.0 Weakly correlated
143 MLT1F1 21 *** 99.0 Highly correlated
144 L1M3 20 n.s 99.0 Highly correlated
145 LTR33 20 n.s 99.0 Highly correlated
146 MLT1E2 20 n.s 99.0 Highly correlated
147 MLT1H2 20 ** 99.0 Highly correlated
148 MSTD 20 n.s 74.0 Weakly correlated
149 Plat_L3 20 **** 99.0 Highly correlated
150 LTR41C 19 **** 99.0 Highly correlated
151 LTR76 19 **** 74.0 Weakly correlated
152 MER4E 19 **** 74.0 Weakly correlated
153 THE1D 19 n.s 43.0 Weakly correlated
154 HERVK-int 18 **** 28.9 Weakly correlated
155 L1MA8 18 n.s 87.0 Weakly correlated
156 L1MC 18 n.s 99.0 Highly correlated
157 L1MEi 18 n.s 99.0 Highly correlated
158 L1PA12 18 n.s 74.0 Weakly correlated
159 MER50 18 * 43.0 Weakly correlated
160 MLT2F 18 **** 99.0 Highly correlated
161 THE1D-int 18 n.s 28.9 Weakly correlated
162 L1MA2 17 n.s 74.0 Weakly correlated
163 L1MA6 17 n.s 87.0 Weakly correlated
164 L1MDb 17 **** 99.0 Highly correlated
165 L1PB3 17 n.s 74.0 Weakly correlated
166 MLT1A 17 n.s 99.0 Highly correlated
167 AluSq4 16 **** 74.0 Weakly correlated
168 AluYf1 16 *** 19.6 Weakly correlated
169 L1PA17 16 n.s 74.0 Weakly correlated
170 MLT1J1 16 * 99.0 Highly correlated
171 AluYa5 15 n.s 15.2 Weakly correlated
172 L1MEb 15 ** 99.0 Highly correlated
173 LTR16A1 15 ** 99.0 Highly correlated
174 LTR41 15 **** 99.0 Highly correlated
175 MER57-int 15 * 87.0 Weakly correlated
176 MSTB 15 n.s 43.0 Weakly correlated
177 MamGypsy2-I 15 *** 99.0 Highly correlated
178 FAM 14 ** 87.0 Weakly correlated
179 L1PB 14 n.s 74.0 Weakly correlated
180 L4_C_Mam 14 n.s 99.0 Highly correlated
181 LTR49-int 14 n.s 74.0 Weakly correlated
182 MLT2D 14 n.s 99.0 Highly correlated
183 L1ME3E 13 n.s 99.0 Highly correlated
184 LTR18A 13 **** 43.0 Weakly correlated
185 LTR41B 13 **** 99.0 Highly correlated
186 LTR88b 13 **** 99.0 Highly correlated
187 MER49 13 ** 43.0 Weakly correlated
188 MER4B-int 13 * 99.0 Highly correlated
189 MLT1G 13 n.s 99.0 Highly correlated
190 MLT1G1 13 n.s 99.0 Highly correlated
191 MLT1N2 13 n.s 99.0 Highly correlated
192 MamRep605 13 * 99.0 Highly correlated
193 AluSq10 12 ** 74.0 Weakly correlated
194 AluYh3 12 * 15.2 Weakly correlated
195 HAL1b 12 n.s 99.0 Highly correlated
196 L1MB1 12 n.s 99.0 Highly correlated
197 L1P1 12 n.s 19.6 Weakly correlated
198 LTR10F 12 **** 28.9 Weakly correlated
199 LTR50 12 * 99.0 Highly correlated
200 LTR55 12 **** 99.0 Highly correlated
201 LTR79 12 n.s 99.0 Highly correlated
202 MER101-int 12 ** 74.0 Weakly correlated
203 MER41B 12 n.s 74.0 Weakly correlated
204 MSTC 12 n.s 74.0 Weakly correlated
205 SVA_B 12 ** 15.2 Weakly correlated
206 ERVL-B4-int 11 n.s 99.0 Highly correlated
207 HERV4_I-int 11 **** 43.0 Weakly correlated
208 L1MEh 11 n.s 99.0 Highly correlated
209 L1P2 11 n.s 28.9 Weakly correlated
210 L1P4 11 n.s 74.0 Weakly correlated
211 LTR33A 11 * 99.0 Highly correlated
212 LTR71B 11 **** 43.0 Weakly correlated
213 MER21C 11 n.s 99.0 Highly correlated
214 MER66B 11 ** 43.0 Weakly correlated
215 MER68 11 * 99.0 Highly correlated
216 MER74B 11 *** 99.0 Highly correlated
217 L1HS 10 n.s 8.6 Weakly correlated
218 L1M3c 10 * 99.0 Highly correlated
219 L1ME3D 10 n.s 99.0 Highly correlated
220 LFSINE_Vert 10 *** 319.0 Weakly correlated
221 LOR1-int 10 n.s 74.0 Weakly correlated
222 LTR16C 10 n.s 99.0 Highly correlated
223 LTR45B 10 **** 74.0 Weakly correlated
224 MER41-int 10 n.s 74.0 Weakly correlated
225 MER41A 10 n.s 74.0 Weakly correlated
226 MLT1A1 10 n.s 87.0 Weakly correlated
227 MamGypLTR3 10 **** 99.0 Highly correlated
228 HERVIP10FH-int 9 ** 28.9 Weakly correlated
229 HERVL40-int 9 * 99.0 Highly correlated
230 L1ME5 9 n.s 99.0 Highly correlated
231 L1MEg2 9 *** 99.0 Highly correlated
232 LTR16A 9 n.s 99.0 Highly correlated
233 LTR78 9 n.s 99.0 Highly correlated
234 MER76 9 *** 99.0 Highly correlated
235 MLT1E3 9 n.s 99.0 Highly correlated
236 MLT1O 9 n.s 99.0 Highly correlated
237 SVA_F 9 n.s 0.0 Weakly correlated
238 X6A_LINE 9 **** 99.0 Highly correlated
239 AluYb8 8 n.s 15.2 Weakly correlated
240 L1M3f 8 n.s 87.0 Weakly correlated
241 L1MA5A 8 n.s 87.0 Weakly correlated
242 L2-3_Crp 8 * 431.0 Weakly correlated
243 LTR14B 8 **** 28.9 Weakly correlated
244 LTR1A2 8 n.s 43.0 Weakly correlated
245 LTR65 8 **** 99.0 Highly correlated
246 LTR85a 8 ** 99.0 Highly correlated
247 MER54B 8 **** 87.0 Weakly correlated
248 MLT1M 8 * 99.0 Highly correlated
249 AluYe5 7 * 74.0 Weakly correlated
250 HAL1M8 7 n.s 99.0 Highly correlated
251 HERVL18-int 7 * 43.0 Weakly correlated
252 L1M6B 7 **** 99.0 Highly correlated
253 L1M7 7 n.s 99.0 Highly correlated
254 L1ME3C 7 n.s 99.0 Highly correlated
255 LTR104_Mam 7 * 99.0 Highly correlated
256 LTR10E 7 **** 28.9 Weakly correlated
257 LTR12 7 n.s 28.9 Weakly correlated
258 LTR26 7 ** 74.0 Weakly correlated
259 LTR40c 7 ** 99.0 Highly correlated
260 LTR44 7 **** 74.0 Weakly correlated
261 LTR67B 7 n.s 99.0 Highly correlated
262 MER11A 7 n.s 28.9 Weakly correlated
263 MER31B 7 n.s 99.0 Highly correlated
264 MER39 7 n.s 74.0 Weakly correlated
265 MER4C 7 ** 74.0 Weakly correlated
266 MER4D 7 n.s 74.0 Weakly correlated
267 MER51-int 7 * 43.0 Weakly correlated
268 MER77B 7 n.s 99.0 Highly correlated
269 SVA_E 7 * 0.0 Weakly correlated
270 AluYg6 6 ** 15.2 Weakly correlated
271 AluYk4 6 * 15.2 Weakly correlated
272 CR1-3_Croc 6 ** 319.0 Weakly correlated
273 CR1-L3A_Croc 6 **** 319.0 Weakly correlated
274 ERV3-16A3_LTR 6 * 99.0 Highly correlated
275 HERVL-int 6 n.s 74.0 Weakly correlated
276 HUERS-P3b-int 6 n.s 43.0 Weakly correlated
277 L1M6 6 n.s 99.0 Highly correlated
278 L1M8 6 n.s 99.0 Highly correlated
279 LTR13_ 6 **** 28.9 Weakly correlated
280 LTR2 6 n.s 28.9 Weakly correlated
281 LTR37-int 6 n.s 99.0 Highly correlated
282 LTR4 6 **** 28.9 Weakly correlated
283 LTR40b 6 * 99.0 Highly correlated
284 LTR89 6 ** 99.0 Highly correlated
285 LTR8A 6 n.s 43.0 Weakly correlated
286 MER21B 6 n.s 99.0 Highly correlated
287 MER4B 6 n.s 74.0 Weakly correlated
288 MER4D1 6 n.s 74.0 Weakly correlated
289 MER52C 6 * 74.0 Weakly correlated
290 MER57F 6 *** 74.0 Weakly correlated
291 MER61C 6 *** 43.0 Weakly correlated
292 MER65C 6 ** 74.0 Weakly correlated
293 MER66-int 6 n.s 43.0 Weakly correlated
294 MER90a 6 n.s 99.0 Highly correlated
295 MLT1G3 6 n.s 99.0 Highly correlated
296 MLT1H1 6 n.s 99.0 Highly correlated
297 MLT2B3 6 n.s 99.0 Highly correlated
298 MSTA-int 6 n.s 43.0 Weakly correlated
299 MamGypLTR3a 6 * 99.0 Highly correlated
300 MamGypsy2-LTR 6 **** 99.0 Highly correlated
301 PABL_B 6 *** 43.0 Weakly correlated
302 PRIMA4-int 6 * 74.0 Weakly correlated
303 SVA_A 6 n.s 19.6 Weakly correlated
304 THE1B-int 6 n.s 43.0 Weakly correlated
305 AluYb9 5 *** 15.2 Weakly correlated
306 AluYi6 5 *** 15.2 Weakly correlated
307 AluYk3 5 n.s 19.6 Weakly correlated
308 CR1_Mam 5 n.s 99.0 Highly correlated
309 ERV24_Prim-int 5 * 74.0 Weakly correlated
310 HERV17-int 5 n.s 28.9 Weakly correlated
311 HERVH-int 5 n.s 28.9 Weakly correlated
312 HERVL74-int 5 ** 99.0 Highly correlated
313 L1M3a 5 n.s 99.0 Highly correlated
314 L1MEj 5 n.s 99.0 Highly correlated
315 L1P5 5 ** 74.0 Weakly correlated
316 L1PBa1 5 n.s 74.0 Weakly correlated
317 LTR10C 5 * 28.9 Weakly correlated
318 LTR16A2 5 n.s 99.0 Highly correlated
319 LTR19B 5 ** 43.0 Weakly correlated
320 LTR25-int 5 n.s 43.0 Weakly correlated
321 LTR33A_ 5 n.s 99.0 Highly correlated
322 LTR35A 5 **** 43.0 Weakly correlated
323 LTR45C 5 ** 99.0 Highly correlated
324 LTR54 5 n.s 74.0 Weakly correlated
325 LTR72 5 **** 74.0 Weakly correlated
326 MER34D 5 *** 74.0 Weakly correlated
327 MER4A 5 n.s 74.0 Weakly correlated
328 MER52A 5 n.s 74.0 Weakly correlated
329 MER61D 5 *** 43.0 Weakly correlated
330 MER65-int 5 n.s 87.0 Weakly correlated
331 MER74A 5 n.s 99.0 Highly correlated
332 MER77 5 n.s 99.0 Highly correlated
333 MLT2A2 5 n.s 74.0 Weakly correlated
334 MLT2B4 5 n.s 99.0 Highly correlated
335 MamGypLTR1a 5 * 99.0 Highly correlated
336 THE1C-int 5 n.s 43.0 Weakly correlated
337 AluYa8 4 *** 15.2 Weakly correlated
338 AluYc3 4 * 74.0 Weakly correlated
339 AluYk11 4 ** 15.2 Weakly correlated
340 HERVE-int 4 n.s 19.6 Weakly correlated
341 HERVI-int 4 * 28.9 Weakly correlated
342 L1M3e 4 n.s 99.0 Highly correlated
343 L1P4a 4 n.s 74.0 Weakly correlated
344 L1PA8A 4 n.s 74.0 Weakly correlated
345 L2-1_AMi 4 * 319.0 Weakly correlated
346 L4_B_Mam 4 n.s 99.0 Highly correlated
347 LOR1b 4 n.s 74.0 Weakly correlated
348 LTR101_Mam 4 n.s 99.0 Highly correlated
349 LTR106_Mam 4 * 99.0 Highly correlated
350 LTR12D 4 n.s 19.6 Weakly correlated
351 LTR12E 4 * 19.6 Weakly correlated
352 LTR15 4 ** 28.9 Weakly correlated
353 LTR16 4 n.s 99.0 Highly correlated
354 LTR16D 4 n.s 99.0 Highly correlated
355 LTR16D2 4 ** 99.0 Highly correlated
356 LTR18B 4 * 43.0 Weakly correlated
357 LTR19A 4 * 43.0 Weakly correlated
358 LTR21A 4 **** 28.9 Weakly correlated
359 LTR25 4 * 43.0 Weakly correlated
360 LTR26D 4 ** 0.0 Weakly correlated
361 LTR43 4 * 74.0 Weakly correlated
362 LTR82A 4 n.s 99.0 Highly correlated
363 LTR85c 4 n.s 99.0 Highly correlated
364 LTR86B1 4 *** 99.0 Highly correlated
365 LTR88c 4 * 99.0 Highly correlated
366 MER21A 4 n.s 74.0 Weakly correlated
367 MER34A 4 n.s 99.0 Highly correlated
368 MER41D 4 * 74.0 Weakly correlated
369 MER4CL34 4 n.s 43.0 Weakly correlated
370 MER50-int 4 n.s 43.0 Weakly correlated
371 MER51A 4 n.s 43.0 Weakly correlated
372 MER52-int 4 n.s 99.0 Highly correlated
373 MER57E1 4 * 87.0 Weakly correlated
374 MER61B 4 * 43.0 Weakly correlated
375 MER65A 4 n.s 74.0 Weakly correlated
376 MER67A 4 ** 99.0 Highly correlated
377 MER67D 4 n.s 99.0 Highly correlated
378 MER70A 4 n.s 87.0 Weakly correlated
379 MLT1D-int 4 n.s 99.0 Highly correlated
380 MLT1E1A 4 n.s 99.0 Highly correlated
381 MLT1J-int 4 n.s 99.0 Highly correlated
382 MLT2B1 4 n.s 99.0 Highly correlated
383 MLT2C1 4 n.s 99.0 Highly correlated
384 MamGypLTR1d 4 * 99.0 Highly correlated
385 MamRep1527 4 n.s 99.0 Highly correlated
386 PABL_A-int 4 n.s 74.0 Weakly correlated
387 PABL_B-int 4 n.s 74.0 Weakly correlated
388 X2_LINE 4 **** 319.0 Weakly correlated
389 X6B_LINE 4 ** 99.0 Highly correlated
390 X7A_LINE 4 ** 319.0 Weakly correlated
391 AmnSINE2 3 ** 319.0 Weakly correlated
392 HERV3-int 3 n.s 28.9 Weakly correlated
393 HERVH48-int 3 n.s 28.9 Weakly correlated
394 HERVK13-int 3 ** 19.6 Weakly correlated
395 Harlequin-int 3 n.s 74.0 Weakly correlated
396 L1M 3 ** 74.0 Weakly correlated
397 L1M2c 3 n.s 87.0 Weakly correlated
398 L1MA10 3 n.s 99.0 Highly correlated
399 L5 3 n.s 99.0 Highly correlated
400 LTR13A 3 n.s 28.9 Weakly correlated
401 LTR19C 3 ** 43.0 Weakly correlated
402 LTR23 3 n.s 74.0 Weakly correlated
403 LTR28 3 * 43.0 Weakly correlated
404 LTR37A 3 n.s 99.0 Highly correlated
405 LTR40a 3 n.s 99.0 Highly correlated
406 LTR56 3 n.s 74.0 Weakly correlated
407 LTR61 3 ** 43.0 Weakly correlated
408 LTR62 3 n.s 74.0 Weakly correlated
409 LTR81 3 ** 99.0 Highly correlated
410 LTR9B 3 n.s 43.0 Weakly correlated
411 MER110 3 n.s 99.0 Highly correlated
412 MER110A 3 n.s 99.0 Highly correlated
413 MER11B 3 n.s 19.6 Weakly correlated
414 MER11C 3 n.s 19.6 Weakly correlated
415 MER21-int 3 n.s 99.0 Highly correlated
416 MER31-int 3 n.s 99.0 Highly correlated
417 MER34C2 3 n.s 74.0 Weakly correlated
418 MER51B 3 n.s 43.0 Weakly correlated
419 MER54A 3 n.s 87.0 Weakly correlated
420 MER57B1 3 n.s 43.0 Weakly correlated
421 MER57E3 3 ** 74.0 Weakly correlated
422 MER61A 3 n.s 43.0 Weakly correlated
423 MER83B-int 3 n.s 99.0 Highly correlated
424 MER87B 3 ** 74.0 Weakly correlated
425 MER89 3 n.s 99.0 Highly correlated
426 MLT1C-int 3 n.s 94.0 Weakly correlated
427 MLT1G-int 3 * 99.0 Highly correlated
428 MST-int 3 * 74.0 Weakly correlated
429 MSTB-int 3 n.s 43.0 Weakly correlated
430 MSTB2 3 n.s 74.0 Weakly correlated
431 MamGyp-int 3 n.s 99.0 Highly correlated
432 MamGypLTR1c 3 n.s 99.0 Highly correlated
433 MamRep1151 3 n.s 99.0 Highly correlated
434 Penelope1_Vert 3 * 319.0 Weakly correlated
435 PrimLTR79 3 *** 74.0 Weakly correlated
436 SVA_C 3 n.s 15.2 Weakly correlated
437 AluYe6 2 * 74.0 Weakly correlated
438 AluYk12 2 ** 15.2 Weakly correlated
439 CR1-12_AMi 2 ** 319.0 Weakly correlated
440 CR1-16_AMi 2 * 319.0 Weakly correlated
441 ERVL-int 2 n.s 99.0 Highly correlated
442 HERVFH21-int 2 n.s 28.9 Weakly correlated
443 HERVIP10B3-int 2 n.s 28.9 Weakly correlated
444 HERVIP10F-int 2 n.s 28.9 Weakly correlated
445 HERVK22-int 2 n.s 43.0 Weakly correlated
446 HERVKC4-int 2 n.s 28.9 Weakly correlated
447 HERVP71A-int 2 n.s 43.0 Weakly correlated
448 HERVS71-int 2 n.s 28.9 Weakly correlated
449 L1M2a 2 n.s 87.0 Weakly correlated
450 L1M2b 2 n.s 87.0 Weakly correlated
451 L1M3d 2 n.s 99.0 Highly correlated
452 L1MA1 2 n.s 74.0 Weakly correlated
453 L1MEa 2 n.s 99.0 Highly correlated
454 L1PA15-16 2 n.s 74.0 Weakly correlated
455 L1PBb 2 n.s 74.0 Weakly correlated
456 LOR1a 2 n.s 74.0 Weakly correlated
457 LTR06 2 ** 74.0 Weakly correlated
458 LTR1 2 n.s 43.0 Weakly correlated
459 LTR105_Mam 2 n.s 99.0 Highly correlated
460 LTR10B2 2 ** 28.9 Weakly correlated
461 LTR10D 2 * 28.9 Weakly correlated
462 LTR12B 2 n.s 28.9 Weakly correlated
463 LTR12_ 2 n.s 28.9 Weakly correlated
464 LTR16E1 2 n.s 99.0 Highly correlated
465 LTR16E2 2 n.s 99.0 Highly correlated
466 LTR17 2 n.s 28.9 Weakly correlated
467 LTR24B 2 n.s 74.0 Weakly correlated
468 LTR27 2 * 43.0 Weakly correlated
469 LTR27E 2 n.s 43.0 Weakly correlated
470 LTR29 2 n.s 43.0 Weakly correlated
471 LTR33C 2 n.s 99.0 Highly correlated
472 LTR34 2 n.s 74.0 Weakly correlated
473 LTR35 2 ** 43.0 Weakly correlated
474 LTR36 2 n.s 74.0 Weakly correlated
475 LTR46 2 * 43.0 Weakly correlated
476 LTR47A 2 n.s 74.0 Weakly correlated
477 LTR47A2 2 * 74.0 Weakly correlated
478 LTR48 2 n.s 74.0 Weakly correlated
479 LTR54B 2 n.s 74.0 Weakly correlated
480 LTR57 2 n.s 74.0 Weakly correlated
481 LTR5_Hs 2 n.s 0.0 Weakly correlated
482 LTR66 2 n.s 43.0 Weakly correlated
483 LTR71A 2 * 43.0 Weakly correlated
484 LTR72B 2 * 74.0 Weakly correlated
485 LTR75 2 n.s 99.0 Highly correlated
486 LTR81A 2 n.s 99.0 Highly correlated
487 LTR82B 2 n.s 99.0 Highly correlated
488 LTR83 2 n.s 99.0 Highly correlated
489 LTR88a 2 n.s 99.0 Highly correlated
490 LTR90A 2 * 99.0 Highly correlated
491 LTR91 2 * 99.0 Highly correlated
492 MER101 2 n.s 74.0 Weakly correlated
493 MER31A 2 n.s 87.0 Weakly correlated
494 MER34 2 n.s 87.0 Weakly correlated
495 MER4A1 2 n.s 74.0 Weakly correlated
496 MER51C 2 * 43.0 Weakly correlated
497 MER51D 2 ** 43.0 Weakly correlated
498 MER51E 2 * 43.0 Weakly correlated
499 MER57D 2 n.s 87.0 Weakly correlated
500 MER61-int 2 n.s 43.0 Weakly correlated
501 MER61F 2 * 43.0 Weakly correlated
502 MER66C 2 n.s 43.0 Weakly correlated
503 MER68B 2 n.s 99.0 Highly correlated
504 MER72B 2 * 43.0 Weakly correlated
505 MER73 2 n.s 87.0 Weakly correlated
506 MER84-int 2 n.s 74.0 Weakly correlated
507 MER89-int 2 n.s 99.0 Highly correlated
508 MER90 2 n.s 99.0 Highly correlated
509 MER92-int 2 n.s 99.0 Highly correlated
510 MER92B 2 n.s 99.0 Highly correlated
511 MLT1F2-int 2 n.s 99.0 Highly correlated
512 MLT1H1-int 2 n.s 99.0 Highly correlated
513 MLT1J1-int 2 n.s 99.0 Highly correlated
514 MLT2B5 2 n.s 87.0 Weakly correlated
515 MamGypLTR2b 2 n.s 99.0 Highly correlated
516 Mam_R4 2 n.s 99.0 Highly correlated
517 X9_LINE 2 * 319.0 Weakly correlated
518 AluYd8 1 n.s 15.2 Weakly correlated
519 AluYh3a3 1 n.s 15.2 Weakly correlated
520 AluYh7 1 * 0.0 Weakly correlated
521 AluYh9 1 ** 15.2 Weakly correlated
522 CR1-13_AMi 1 * 319.0 Weakly correlated
523 ERV24B_Prim-int 1 n.s 74.0 Weakly correlated
524 HERV15-int 1 n.s 28.9 Weakly correlated
525 HERV16-int 1 n.s 99.0 Highly correlated
526 HERV1_LTRd 1 ** 43.0 Weakly correlated
527 HERV1_LTRe 1 ** 43.0 Weakly correlated
528 HERV35I-int 1 n.s 43.0 Weakly correlated
529 HERV9N-int 1 n.s 19.6 Weakly correlated
530 HERV9NC-int 1 n.s 19.6 Weakly correlated
531 HERVK11D-int 1 n.s 19.6 Weakly correlated
532 HERVK9-int 1 n.s 28.9 Weakly correlated
533 L1P 1 ** 19.6 Weakly correlated
534 LTR102_Mam 1 n.s 99.0 Highly correlated
535 LTR103b_Mam 1 n.s 99.0 Highly correlated
536 LTR10B 1 * 28.9 Weakly correlated
537 LTR12F 1 n.s 28.9 Weakly correlated
538 LTR16B 1 n.s 99.0 Highly correlated
539 LTR16B2 1 n.s 99.0 Highly correlated
540 LTR16D1 1 n.s 99.0 Highly correlated
541 LTR1D1 1 n.s 43.0 Weakly correlated
542 LTR22B 1 n.s 28.9 Weakly correlated
543 LTR22C0 1 n.s 28.9 Weakly correlated
544 LTR24 1 n.s 74.0 Weakly correlated
545 LTR24C 1 n.s 74.0 Weakly correlated
546 LTR26C 1 n.s 0.0 Weakly correlated
547 LTR2752 1 n.s 43.0 Weakly correlated
548 LTR2B 1 n.s 19.6 Weakly correlated
549 LTR2C 1 n.s 19.6 Weakly correlated
550 LTR32 1 n.s 43.0 Weakly correlated
551 LTR37B 1 n.s 99.0 Highly correlated
552 LTR3B 1 n.s 28.9 Weakly correlated
553 LTR42 1 n.s 74.0 Weakly correlated
554 LTR43-int 1 n.s 74.0 Weakly correlated
555 LTR43B 1 n.s 74.0 Weakly correlated
556 LTR49 1 n.s 74.0 Weakly correlated
557 LTR52 1 n.s 99.0 Highly correlated
558 LTR60 1 ** 43.0 Weakly correlated
559 LTR60B 1 n.s 74.0 Weakly correlated
560 LTR6A 1 n.s 28.9 Weakly correlated
561 LTR7 1 n.s 19.6 Weakly correlated
562 LTR70 1 n.s 74.0 Weakly correlated
563 LTR75B 1 n.s 99.0 Highly correlated
564 LTR78B 1 n.s 99.0 Highly correlated
565 LTR7B 1 n.s 28.9 Weakly correlated
566 LTR7C 1 n.s 28.9 Weakly correlated
567 LTR81B 1 n.s 99.0 Highly correlated
568 MER110-int 1 n.s 99.0 Highly correlated
569 MER129 1 * 319.0 Weakly correlated
570 MER34-int 1 n.s 99.0 Highly correlated
571 MER34B-int 1 n.s 99.0 Highly correlated
572 MER39B 1 n.s 74.0 Weakly correlated
573 MER41C 1 n.s 74.0 Weakly correlated
574 MER41E 1 n.s 74.0 Weakly correlated
575 MER41G 1 n.s 74.0 Weakly correlated
576 MER50B 1 n.s 43.0 Weakly correlated
577 MER52D 1 n.s 74.0 Weakly correlated
578 MER57A-int 1 n.s 43.0 Weakly correlated
579 MER57A1 1 n.s 43.0 Weakly correlated
580 MER65D 1 n.s 87.0 Weakly correlated
581 MER66A 1 n.s 43.0 Weakly correlated
582 MER67B 1 n.s 99.0 Highly correlated
583 MER67C 1 n.s 99.0 Highly correlated
584 MER68-int 1 n.s 99.0 Highly correlated
585 MER72 1 n.s 43.0 Weakly correlated
586 MER83 1 n.s 43.0 Weakly correlated
587 MER92C 1 n.s 99.0 Highly correlated
588 MER9a3 1 n.s 28.9 Weakly correlated
589 MLT1A0-int 1 n.s 99.0 Highly correlated
590 MLT1E2-int 1 n.s 99.0 Highly correlated
591 MLT1E3-int 1 * 99.0 Highly correlated
592 MLT1F-int 1 n.s 99.0 Highly correlated
593 MLT1G3-int 1 n.s 99.0 Highly correlated
594 MLT1H-int 1 n.s 99.0 Highly correlated
595 MLT1L-int 1 * 99.0 Highly correlated
596 MLT2A1 1 n.s 74.0 Weakly correlated
597 MLT2B2 1 n.s 99.0 Highly correlated
598 MLT2C2 1 n.s 99.0 Highly correlated
599 MLT2E 1 n.s 99.0 Highly correlated
600 MamGypLTR1b 1 n.s 99.0 Highly correlated
601 MamGypLTR2c 1 n.s 99.0 Highly correlated
602 THE1A 1 n.s 43.0 Weakly correlated
603 X7B_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1PB1 176 *** 74.0 Weakly correlated
2 L1MEg 168 **** 99.0 Highly correlated
3 L1MEd 144 **** 99.0 Highly correlated
4 L1M4 130 **** 99.0 Highly correlated
5 L1MCa 120 **** 99.0 Highly correlated
6 L1MEf 116 **** 99.0 Highly correlated
7 L1M4c 95 **** 99.0 Highly correlated
8 L1MDa 85 **** 99.0 Highly correlated
9 L1MEc 54 n.s 99.0 Highly correlated
10 L1MB3 42 n.s 99.0 Highly correlated
11 L1MB7 39 n.s 99.0 Highly correlated
12 L1MB4 39 n.s 99.0 Highly correlated
13 L2a 38 n.s 99.0 Highly correlated
14 L1ME1 38 n.s 99.0 Highly correlated
15 L1MCc 32 **** 99.0 Highly correlated
16 MER4E1 31 **** 74.0 Weakly correlated
17 L1MD2 27 n.s 99.0 Highly correlated
18 L2c 26 n.s 99.0 Highly correlated
19 L1MC1 26 n.s 99.0 Highly correlated
20 L1PREC2 25 n.s 43.0 Weakly correlated
21 HAL1 25 n.s 99.0 Highly correlated
22 MLT1C 25 n.s 94.0 Weakly correlated
23 L1MD1 25 n.s 99.0 Highly correlated
24 L1MB5 24 n.s 99.0 Highly correlated
25 MIRb 23 n.s 99.0 Highly correlated
26 L1PA13 23 n.s 74.0 Weakly correlated
27 L1PA7 22 n.s 74.0 Weakly correlated
28 AluJb 21 n.s 74.0 Weakly correlated
29 AluY 20 n.s 74.0 Weakly correlated
30 L1PA15 19 n.s 74.0 Weakly correlated
31 L1MB8 18 n.s 99.0 Highly correlated
32 L1PA4 18 n.s 19.6 Weakly correlated
33 L1MC4 18 n.s 99.0 Highly correlated
34 AluSx 17 n.s 74.0 Weakly correlated
35 AluSz 17 n.s 74.0 Weakly correlated
36 L1PA11 16 n.s 74.0 Weakly correlated
37 L1ME3B 16 n.s 99.0 Highly correlated
38 L1M5 16 n.s 99.0 Highly correlated
39 L1ME3Cz 16 n.s 99.0 Highly correlated
40 MIRc 16 n.s 99.0 Highly correlated
41 MIR 15 n.s 99.0 Highly correlated
42 MLT1B 15 n.s 99.0 Highly correlated
43 L1M4b 15 n.s 99.0 Highly correlated
44 L1MB2 15 n.s 99.0 Highly correlated
45 L1PA14 15 n.s 74.0 Weakly correlated
46 L1MA4 15 n.s 87.0 Weakly correlated
47 AluSx1 15 n.s 74.0 Weakly correlated
48 L1ME3A 14 n.s 99.0 Highly correlated
49 L2b 14 n.s 99.0 Highly correlated
50 L1MCb 14 n.s 99.0 Highly correlated
51 L1PA10 14 n.s 74.0 Weakly correlated
52 L1PA8 14 n.s 74.0 Weakly correlated
53 L1PB2 13 n.s 74.0 Weakly correlated
54 L1MC2 13 n.s 99.0 Highly correlated
55 AluJr 13 n.s 74.0 Weakly correlated
56 L1ME2 13 n.s 99.0 Highly correlated
57 L1ME4b 12 n.s 99.0 Highly correlated
58 L1M4a1 12 n.s 99.0 Highly correlated
59 L1ME3G 12 n.s 99.0 Highly correlated
60 L1PA5 11 n.s 19.6 Weakly correlated
61 L1M4a2 11 n.s 99.0 Highly correlated
62 AluJo 11 n.s 74.0 Weakly correlated
63 L2 10 n.s 99.0 Highly correlated
64 AluSq2 10 n.s 74.0 Weakly correlated
65 AluSc 10 n.s 74.0 Weakly correlated
66 L1MC3 9 n.s 99.0 Highly correlated
67 L1M2 9 n.s 99.0 Highly correlated
68 L1MA4A 9 n.s 87.0 Weakly correlated
69 L1PA16 9 n.s 74.0 Weakly correlated
70 L1ME2z 8 n.s 99.0 Highly correlated
71 L1ME3 8 n.s 99.0 Highly correlated
72 L1PBa 8 n.s 74.0 Weakly correlated
73 AluSp 8 n.s 74.0 Weakly correlated
74 L1PB3 8 n.s 74.0 Weakly correlated
75 L3 8 n.s 99.0 Highly correlated
76 AluSq 7 n.s 74.0 Weakly correlated
77 L1PA17 7 n.s 74.0 Weakly correlated
78 L1ME4a 7 n.s 99.0 Highly correlated
79 L1PA6 7 n.s 28.9 Weakly correlated
80 MIR3 7 n.s 99.0 Highly correlated
81 AluSz6 7 n.s 74.0 Weakly correlated
82 L1MDb 7 n.s 99.0 Highly correlated
83 L1ME3F 7 n.s 99.0 Highly correlated
84 L1PA3 7 n.s 19.6 Weakly correlated
85 L1PB 7 n.s 74.0 Weakly correlated
86 L1PA2 6 n.s 15.2 Weakly correlated
87 MLT1K 6 n.s 99.0 Highly correlated
88 L1M1 6 n.s 74.0 Weakly correlated
89 L1MA7 6 n.s 87.0 Weakly correlated
90 MER4E 6 n.s 74.0 Weakly correlated
91 AluSx3 6 n.s 74.0 Weakly correlated
92 MER4-int 6 n.s 74.0 Weakly correlated
93 L1P1 5 n.s 19.6 Weakly correlated
94 ERVL-E-int 5 n.s 99.0 Highly correlated
95 L1M3 5 n.s 99.0 Highly correlated
96 L1MA9 5 n.s 99.0 Highly correlated
97 L1MD3 5 n.s 99.0 Highly correlated
98 HAL1ME 5 n.s 99.0 Highly correlated
99 L1MA3 5 n.s 74.0 Weakly correlated
100 L1MEb 5 n.s 99.0 Highly correlated
101 L1P2 5 n.s 28.9 Weakly correlated
102 L1MA5 4 n.s 87.0 Weakly correlated
103 L1PA12 4 n.s 74.0 Weakly correlated
104 MLT1D 4 n.s 99.0 Highly correlated
105 HERVIP10FH-int 4 n.s 28.9 Weakly correlated
106 L1ME3E 4 n.s 99.0 Highly correlated
107 MLT1A0 4 n.s 99.0 Highly correlated
108 HAL1b 4 n.s 99.0 Highly correlated
109 L1MD 4 n.s 99.0 Highly correlated
110 LTR16C 4 n.s 99.0 Highly correlated
111 L1MEh 4 n.s 99.0 Highly correlated
112 L1MC5a 3 n.s 99.0 Highly correlated
113 L1PB4 3 n.s 99.0 Highly correlated
114 AluSg 3 n.s 74.0 Weakly correlated
115 L1MA8 3 n.s 87.0 Weakly correlated
116 PRIMA4-int 3 n.s 74.0 Weakly correlated
117 L1MA2 3 n.s 74.0 Weakly correlated
118 L1MA6 3 n.s 87.0 Weakly correlated
119 LTR10C 3 n.s 28.9 Weakly correlated
120 MLT1H 3 n.s 99.0 Highly correlated
121 MamRTE1 3 n.s 99.0 Highly correlated
122 L1MC5 3 n.s 99.0 Highly correlated
123 L4_A_Mam 3 n.s 99.0 Highly correlated
124 L1M7 3 n.s 99.0 Highly correlated
125 MLT1F 3 n.s 99.0 Highly correlated
126 AluJr4 3 n.s 74.0 Weakly correlated
127 FLAM_C 3 n.s 74.0 Weakly correlated
128 L1MA5A 3 n.s 87.0 Weakly correlated
129 L1M3f 3 n.s 87.0 Weakly correlated
130 L1MB1 3 n.s 99.0 Highly correlated
131 L1MC4a 3 n.s 99.0 Highly correlated
132 MER49 2 n.s 43.0 Weakly correlated
133 MLT1E2 2 n.s 99.0 Highly correlated
134 MLT1G3 2 n.s 99.0 Highly correlated
135 X6A_LINE 2 n.s 99.0 Highly correlated
136 L1ME3D 2 n.s 99.0 Highly correlated
137 MER50 2 n.s 43.0 Weakly correlated
138 MER57-int 2 n.s 87.0 Weakly correlated
139 MER11A 2 n.s 28.9 Weakly correlated
140 MLT1L 2 n.s 99.0 Highly correlated
141 AluSc8 2 n.s 74.0 Weakly correlated
142 L1PA8A 2 n.s 74.0 Weakly correlated
143 Plat_L3 2 n.s 99.0 Highly correlated
144 THE1D-int 2 n.s 28.9 Weakly correlated
145 L1P5 2 n.s 74.0 Weakly correlated
146 LTR16A1 2 n.s 99.0 Highly correlated
147 L1M2b 2 n.s 87.0 Weakly correlated
148 MER41-int 2 n.s 74.0 Weakly correlated
149 HERVK-int 2 n.s 28.9 Weakly correlated
150 L1ME4c 2 n.s 99.0 Highly correlated
151 L1P3 2 n.s 74.0 Weakly correlated
152 LTR76 2 n.s 74.0 Weakly correlated
153 LTR88b 2 n.s 99.0 Highly correlated
154 MER4B-int 2 n.s 99.0 Highly correlated
155 ERV3-16A3_I-int 2 n.s 99.0 Highly correlated
156 FLAM_A 2 n.s 74.0 Weakly correlated
157 HERVL-int 2 n.s 74.0 Weakly correlated
158 L1M6B 2 n.s 99.0 Highly correlated
159 MLT1H2 2 n.s 99.0 Highly correlated
160 CR1-3_Croc 1 n.s 319.0 Weakly correlated
161 HERVE-int 1 n.s 19.6 Weakly correlated
162 L1M2a 1 n.s 87.0 Weakly correlated
163 L4_C_Mam 1 n.s 99.0 Highly correlated
164 LTR16 1 n.s 99.0 Highly correlated
165 LTR19B 1 n.s 43.0 Weakly correlated
166 LTR45C 1 n.s 99.0 Highly correlated
167 LTR62 1 n.s 74.0 Weakly correlated
168 LTR85a 1 n.s 99.0 Highly correlated
169 MER11B 1 n.s 19.6 Weakly correlated
170 MER70A 1 n.s 87.0 Weakly correlated
171 MLT1A 1 n.s 99.0 Highly correlated
172 FRAM 1 n.s 74.0 Weakly correlated
173 HERVL40-int 1 n.s 99.0 Highly correlated
174 L1M 1 n.s 74.0 Weakly correlated
175 L1M3c 1 n.s 99.0 Highly correlated
176 LTR12_ 1 n.s 28.9 Weakly correlated
177 LTR79 1 n.s 99.0 Highly correlated
178 MER65C 1 n.s 74.0 Weakly correlated
179 MER73 1 n.s 87.0 Weakly correlated
180 MER77 1 n.s 99.0 Highly correlated
181 MLT1A1 1 n.s 87.0 Weakly correlated
182 MSTB2 1 n.s 74.0 Weakly correlated
183 SVA_D 1 n.s 15.2 Weakly correlated
184 L1MEg2 1 n.s 99.0 Highly correlated
185 L1PBa1 1 n.s 74.0 Weakly correlated
186 LTR12C 1 n.s 19.6 Weakly correlated
187 LTR82A 1 n.s 99.0 Highly correlated
188 MER101-int 1 n.s 74.0 Weakly correlated
189 MLT1J 1 n.s 99.0 Highly correlated
190 MamGyp-int 1 n.s 99.0 Highly correlated
191 MamGypsy2-LTR 1 n.s 99.0 Highly correlated
192 Mam_R4 1 n.s 99.0 Highly correlated
193 AluSg4 1 n.s 74.0 Weakly correlated
194 AluYj4 1 n.s 0.0 Weakly correlated
195 L1M3d 1 n.s 99.0 Highly correlated
196 LTR35 1 n.s 43.0 Weakly correlated
197 LTR41B 1 n.s 99.0 Highly correlated
198 LTR5_Hs 1 n.s 0.0 Weakly correlated
199 LTR65 1 n.s 99.0 Highly correlated
200 LTR72 1 n.s 74.0 Weakly correlated
201 MLT1E3 1 n.s 99.0 Highly correlated
202 MLT2D 1 n.s 99.0 Highly correlated
203 HERV4_I-int 1 n.s 43.0 Weakly correlated
204 LTR33A_ 1 n.s 99.0 Highly correlated
205 LTR56 1 n.s 74.0 Weakly correlated
206 MER34-int 1 n.s 99.0 Highly correlated
207 MER51-int 1 n.s 43.0 Weakly correlated
208 MER90a 1 n.s 99.0 Highly correlated
209 MLT1E3-int 1 * 99.0 Highly correlated
210 MLT1G 1 n.s 99.0 Highly correlated
211 MLT2C1 1 n.s 99.0 Highly correlated
212 SVA_F 1 n.s 0.0 Weakly correlated
213 HUERS-P3b-int 1 n.s 43.0 Weakly correlated
214 L1MA10 1 n.s 99.0 Highly correlated
215 L1P 1 ** 19.6 Weakly correlated
216 L1P4 1 n.s 74.0 Weakly correlated
217 LOR1-int 1 n.s 74.0 Weakly correlated
218 LTR106_Mam 1 n.s 99.0 Highly correlated
219 LTR26D 1 n.s 0.0 Weakly correlated
220 LTR37A 1 n.s 99.0 Highly correlated
221 LTR40c 1 n.s 99.0 Highly correlated
222 LTR9 1 n.s 43.0 Weakly correlated
223 MER39 1 n.s 74.0 Weakly correlated
224 MLT2F 1 n.s 99.0 Highly correlated
225 MamSINE1 1 n.s 99.0 Highly correlated
226 AluSg7 1 n.s 74.0 Weakly correlated
227 HERVK13-int 1 n.s 19.6 Weakly correlated
228 HERVL18-int 1 n.s 43.0 Weakly correlated
229 L1ME5 1 n.s 99.0 Highly correlated
230 L1MEi 1 n.s 99.0 Highly correlated
231 L1MEj 1 n.s 99.0 Highly correlated
232 LTR13_ 1 n.s 28.9 Weakly correlated
233 LTR19A 1 n.s 43.0 Weakly correlated
234 LTR19C 1 n.s 43.0 Weakly correlated
235 MER21C 1 n.s 99.0 Highly correlated
236 MER4D 1 n.s 74.0 Weakly correlated
237 L1P4a 1 n.s 74.0 Weakly correlated
238 LTR49-int 1 n.s 74.0 Weakly correlated
239 MER4C 1 n.s 74.0 Weakly correlated
240 MSTB1 1 n.s 74.0 Weakly correlated
241 MamGypLTR3 1 n.s 99.0 Highly correlated
242 PABL_B-int 1 n.s 74.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 L1M4C 99.0 Highly correlated
2 L1MA4A 87.0 Weakly correlated
3 L1MB2 99.0 Highly correlated
4 L1MB3 99.0 Highly correlated
5 L1MB4 99.0 Highly correlated
6 L1MB5 99.0 Highly correlated
7 L1MB7 99.0 Highly correlated
8 L1MC4 99.0 Highly correlated
9 L1ME2Z 99.0 Highly correlated
10 L1ME3B 99.0 Highly correlated
11 L1ME3CZ 99.0 Highly correlated
12 L1ME3G 99.0 Highly correlated
13 L1PA3 19.6 Weakly correlated
14 L2A 99.0 Highly correlated
15 L2B 99.0 Highly correlated
16 L2C 99.0 Highly correlated
17 L3 99.0 Highly correlated
18 MER4-INT 74.0 Weakly correlated
19 MER4E 74.0 Weakly correlated
20 MER4E1 74.0 Weakly correlated
21 MLT1K 99.0 Highly correlated