ZRdb KZFP & Repeats
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Human_ZNF2

  • Protein
    Zinc finger protein 2
  • Length
    425
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    99.0 Mya
  • Uniprot_ID
    Q9BSG1
  • NCBI_ID
    7549
Sequence:
MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQPDVIFQLKRGDKPWMVDLHGSEEREWPESVSLDWETKPEIHDASDKKSEGSLRECLGRQSPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDCGKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAFFDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRRYAKQGID
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
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# Domain name Pos
1 KRAB 14..85
2 C2h2 173..195
3 C2h2 201..223
4 C2h2 229..251
5 C2h2 257..279
6 C2h2 285..307
7 C2h2 313..335
8 C2h2 341..363
9 C2h2 369..391
10 dec2h2 397..419
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
4 Molecular Function zinc ion binding
5 Biological Process regulation of DNA-templated transcription
6 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 2687 **** 99.0 Highly correlated
2 AluSx 1797 **** 74.0 Weakly correlated
3 L2a 1796 **** 99.0 Highly correlated
4 AluSx1 1754 **** 74.0 Weakly correlated
5 MIR 1658 **** 99.0 Highly correlated
6 L2c 1425 **** 99.0 Highly correlated
7 AluJb 1418 **** 74.0 Weakly correlated
8 AluSz 1362 **** 74.0 Weakly correlated
9 L2b 1328 **** 99.0 Highly correlated
10 MIRc 1313 **** 99.0 Highly correlated
11 MIR3 1299 **** 99.0 Highly correlated
12 AluY 1149 **** 74.0 Weakly correlated
13 AluJo 822 **** 74.0 Weakly correlated
14 AluJr 819 **** 74.0 Weakly correlated
15 AluSq2 770 **** 74.0 Weakly correlated
16 AluSp 698 **** 74.0 Weakly correlated
17 L2 606 **** 99.0 Highly correlated
18 AluSg 568 **** 74.0 Weakly correlated
19 AluSx3 497 **** 74.0 Weakly correlated
20 AluSz6 485 **** 74.0 Weakly correlated
21 AluSc 403 **** 74.0 Weakly correlated
22 L3 325 **** 99.0 Highly correlated
23 LTR13 292 **** 19.6 Weakly correlated
24 AluSq 280 **** 74.0 Weakly correlated
25 L1MC4 256 ** 99.0 Highly correlated
26 AluSc8 251 **** 74.0 Weakly correlated
27 FLAM_C 248 **** 74.0 Weakly correlated
28 L1PA2 228 n.s 15.2 Weakly correlated
29 MIR1_Amn 227 **** 319.0 Weakly correlated
30 L1M5 192 n.s 99.0 Highly correlated
31 L1PA3 167 n.s 19.6 Weakly correlated
32 AluSx4 152 **** 74.0 Weakly correlated
33 MamGypLTR3a 143 **** 99.0 Highly correlated
34 LTR12C 141 **** 19.6 Weakly correlated
35 L1MB7 139 n.s 99.0 Highly correlated
36 L1ME4a 138 n.s 99.0 Highly correlated
37 AluJr4 135 n.s 74.0 Weakly correlated
38 L1ME4b 128 n.s 99.0 Highly correlated
39 FRAM 127 **** 74.0 Weakly correlated
40 L1ME1 126 n.s 99.0 Highly correlated
41 MLT1C 126 n.s 94.0 Weakly correlated
42 L1MB3 125 n.s 99.0 Highly correlated
43 AluSg7 123 **** 74.0 Weakly correlated
44 MamGypLTR3 122 **** 99.0 Highly correlated
45 MamRTE1 118 **** 99.0 Highly correlated
46 L3b 115 **** 99.0 Highly correlated
47 L1PB1 108 n.s 74.0 Weakly correlated
48 HAL1 107 n.s 99.0 Highly correlated
49 L1MEd 106 n.s 99.0 Highly correlated
50 MLT1K 105 n.s 99.0 Highly correlated
51 L1MC5a 104 n.s 99.0 Highly correlated
52 AluSg4 97 **** 74.0 Weakly correlated
53 MLT1B 93 n.s 99.0 Highly correlated
54 L1M4 90 n.s 99.0 Highly correlated
55 L1PA16 89 n.s 74.0 Weakly correlated
56 FLAM_A 88 **** 74.0 Weakly correlated
57 L1MEc 87 n.s 99.0 Highly correlated
58 L1ME3G 84 n.s 99.0 Highly correlated
59 AluSc5 83 **** 74.0 Weakly correlated
60 L1MEg 81 n.s 99.0 Highly correlated
61 MLT1J 81 n.s 99.0 Highly correlated
62 AmnSINE1 78 **** 319.0 Weakly correlated
63 HUERS-P3-int 75 **** 43.0 Weakly correlated
64 L1PA15-16 74 **** 74.0 Weakly correlated
65 L1ME3A 73 n.s 99.0 Highly correlated
66 L1MB5 72 n.s 99.0 Highly correlated
67 MLT1D 72 n.s 99.0 Highly correlated
68 L1PA5 71 n.s 19.6 Weakly correlated
69 LTR41B 71 **** 99.0 Highly correlated
70 LTR50 71 **** 99.0 Highly correlated
71 Alu 70 **** 74.0 Weakly correlated
72 L1ME2 70 n.s 99.0 Highly correlated
73 AluYc 69 **** 74.0 Weakly correlated
74 MLT1I 67 n.s 99.0 Highly correlated
75 LTR41 65 **** 99.0 Highly correlated
76 L1ME4c 64 ** 99.0 Highly correlated
77 LTR41C 64 **** 99.0 Highly correlated
78 LTR8 64 *** 43.0 Weakly correlated
79 L1MA4 63 n.s 87.0 Weakly correlated
80 L1MB8 63 n.s 99.0 Highly correlated
81 L1MC5 61 n.s 99.0 Highly correlated
82 AluYm1 60 *** 19.6 Weakly correlated
83 L1MB2 60 n.s 99.0 Highly correlated
84 L1PB4 60 n.s 99.0 Highly correlated
85 HUERS-P3b-int 59 **** 43.0 Weakly correlated
86 MLT1H 58 n.s 99.0 Highly correlated
87 HERVK-int 57 **** 28.9 Weakly correlated
88 L1MA9 56 n.s 99.0 Highly correlated
89 MLT1A0 55 n.s 99.0 Highly correlated
90 L1M1 53 n.s 74.0 Weakly correlated
91 L1MEf 53 n.s 99.0 Highly correlated
92 MSTB1 53 * 74.0 Weakly correlated
93 MamSINE1 53 **** 99.0 Highly correlated
94 L1MC3 52 n.s 99.0 Highly correlated
95 LTR33 50 n.s 99.0 Highly correlated
96 MLT1N2 50 **** 99.0 Highly correlated
97 L1MD2 49 n.s 99.0 Highly correlated
98 L1PA4 49 n.s 19.6 Weakly correlated
99 AluYj4 48 **** 0.0 Weakly correlated
100 ERVL-E-int 47 n.s 99.0 Highly correlated
101 L1MC4a 47 n.s 99.0 Highly correlated
102 L1ME3Cz 47 n.s 99.0 Highly correlated
103 MLT1L 47 n.s 99.0 Highly correlated
104 L1PBa 44 n.s 74.0 Weakly correlated
105 L1M2 42 n.s 99.0 Highly correlated
106 L1PA17 42 n.s 74.0 Weakly correlated
107 LTR13_ 42 **** 28.9 Weakly correlated
108 MER66B 42 **** 43.0 Weakly correlated
109 L4_A_Mam 41 n.s 99.0 Highly correlated
110 L1PA7 40 n.s 74.0 Weakly correlated
111 Plat_L3 40 **** 99.0 Highly correlated
112 ERV3-16A3_I-int 39 n.s 99.0 Highly correlated
113 L1MC1 39 n.s 99.0 Highly correlated
114 LTR16C 39 n.s 99.0 Highly correlated
115 L1ME3B 38 n.s 99.0 Highly correlated
116 HAL1ME 37 n.s 99.0 Highly correlated
117 L1MD 37 n.s 99.0 Highly correlated
118 L1ME3 37 n.s 99.0 Highly correlated
119 LTR67B 37 **** 99.0 Highly correlated
120 MLT1F 37 n.s 99.0 Highly correlated
121 L1MB4 36 n.s 99.0 Highly correlated
122 L1PA6 36 n.s 28.9 Weakly correlated
123 L1ME2z 35 n.s 99.0 Highly correlated
124 L1MEi 35 n.s 99.0 Highly correlated
125 L1PA8 35 n.s 74.0 Weakly correlated
126 MER4-int 35 n.s 74.0 Weakly correlated
127 MLT1A 35 n.s 99.0 Highly correlated
128 AluYa5 34 n.s 15.2 Weakly correlated
129 LTR55 34 **** 99.0 Highly correlated
130 L1M4b 33 n.s 99.0 Highly correlated
131 L1MD1 33 n.s 99.0 Highly correlated
132 L1PA13 33 n.s 74.0 Weakly correlated
133 LTR78 33 n.s 99.0 Highly correlated
134 MER21C 33 n.s 99.0 Highly correlated
135 MER50 33 n.s 43.0 Weakly correlated
136 L1PA10 32 n.s 74.0 Weakly correlated
137 LFSINE_Vert 32 **** 319.0 Weakly correlated
138 L1MA8 31 n.s 87.0 Weakly correlated
139 L1MC 31 n.s 99.0 Highly correlated
140 AluSq10 30 **** 74.0 Weakly correlated
141 AluSq4 30 **** 74.0 Weakly correlated
142 L1M3 30 n.s 99.0 Highly correlated
143 L1MA3 30 n.s 74.0 Weakly correlated
144 L1PA15 30 n.s 74.0 Weakly correlated
145 LTR16A 30 n.s 99.0 Highly correlated
146 MLT1H2 30 n.s 99.0 Highly correlated
147 L1HS 28 n.s 8.6 Weakly correlated
148 LTR10A 28 **** 28.9 Weakly correlated
149 HERVIP10FH-int 27 **** 28.9 Weakly correlated
150 LTR16A1 27 * 99.0 Highly correlated
151 MLT1F2 27 n.s 99.0 Highly correlated
152 MLT1J1 27 n.s 99.0 Highly correlated
153 MLT1J2 27 n.s 99.0 Highly correlated
154 AluYf1 26 ** 19.6 Weakly correlated
155 L1M3f 25 ** 87.0 Weakly correlated
156 L1MA4A 25 n.s 87.0 Weakly correlated
157 L1MD3 25 n.s 99.0 Highly correlated
158 L1M4c 24 n.s 99.0 Highly correlated
159 L1MA6 24 n.s 87.0 Weakly correlated
160 FAM 23 * 87.0 Weakly correlated
161 L1MCa 23 n.s 99.0 Highly correlated
162 MLT1G1 23 n.s 99.0 Highly correlated
163 MLT2D 23 n.s 99.0 Highly correlated
164 HERVL18-int 22 *** 43.0 Weakly correlated
165 L1MCc 22 n.s 99.0 Highly correlated
166 L1P1 22 n.s 19.6 Weakly correlated
167 LTR88b 22 **** 99.0 Highly correlated
168 LTR8B 22 n.s 43.0 Weakly correlated
169 MLT1M 22 *** 99.0 Highly correlated
170 MLT1O 22 n.s 99.0 Highly correlated
171 PRIMA4-int 22 **** 74.0 Weakly correlated
172 L1PREC2 21 n.s 43.0 Weakly correlated
173 L2-3_Crp 21 *** 431.0 Weakly correlated
174 LTR71B 21 **** 43.0 Weakly correlated
175 MER41B 21 n.s 74.0 Weakly correlated
176 AluYb8 20 n.s 15.2 Weakly correlated
177 AluYh3 20 n.s 15.2 Weakly correlated
178 L1MDa 20 n.s 99.0 Highly correlated
179 LTR18B 20 **** 43.0 Weakly correlated
180 LTR5_Hs 20 n.s 0.0 Weakly correlated
181 MSTA 20 n.s 43.0 Weakly correlated
182 SVA_A 20 ** 19.6 Weakly correlated
183 THE1B 20 n.s 43.0 Weakly correlated
184 HERVH-int 19 n.s 28.9 Weakly correlated
185 L1ME3F 19 n.s 99.0 Highly correlated
186 LTR65 19 **** 99.0 Highly correlated
187 MLT1E2 19 n.s 99.0 Highly correlated
188 MSTB2 19 n.s 74.0 Weakly correlated
189 MamGypsy2-LTR 19 **** 99.0 Highly correlated
190 HERVL40-int 18 n.s 99.0 Highly correlated
191 L4_C_Mam 18 n.s 99.0 Highly correlated
192 LTR12E 18 **** 19.6 Weakly correlated
193 LTR16 18 n.s 99.0 Highly correlated
194 LTR9 18 ** 43.0 Weakly correlated
195 MSTD 18 n.s 74.0 Weakly correlated
196 THE1D 18 n.s 43.0 Weakly correlated
197 X6A_LINE 18 **** 99.0 Highly correlated
198 ERVL-B4-int 17 n.s 99.0 Highly correlated
199 HAL1M8 17 n.s 99.0 Highly correlated
200 HAL1b 17 n.s 99.0 Highly correlated
201 L1P4 17 n.s 74.0 Weakly correlated
202 L1PB3 17 n.s 74.0 Weakly correlated
203 LTR88a 17 **** 99.0 Highly correlated
204 MER57E3 17 **** 74.0 Weakly correlated
205 MLT1F1 17 n.s 99.0 Highly correlated
206 MLT1G3 17 n.s 99.0 Highly correlated
207 L1MA5 16 n.s 87.0 Weakly correlated
208 L1MA5A 16 n.s 87.0 Weakly correlated
209 L1P4a 16 n.s 74.0 Weakly correlated
210 L4_B_Mam 16 n.s 99.0 Highly correlated
211 LTR16E2 16 n.s 99.0 Highly correlated
212 MLT1G 16 n.s 99.0 Highly correlated
213 THE1C 16 n.s 43.0 Weakly correlated
214 AluYe5 15 * 74.0 Weakly correlated
215 AmnSINE2 15 **** 319.0 Weakly correlated
216 HERV17-int 15 n.s 28.9 Weakly correlated
217 L1M3e 15 n.s 99.0 Highly correlated
218 L1M6 15 n.s 99.0 Highly correlated
219 L1MA7 15 n.s 87.0 Weakly correlated
220 LTR18A 15 **** 43.0 Weakly correlated
221 LTR37A 15 n.s 99.0 Highly correlated
222 LTR37B 15 n.s 99.0 Highly correlated
223 MER41A 15 n.s 74.0 Weakly correlated
224 MER4E 15 * 74.0 Weakly correlated
225 MER89 15 n.s 99.0 Highly correlated
226 MLT1H1 15 n.s 99.0 Highly correlated
227 CR1-3_Croc 14 **** 319.0 Weakly correlated
228 L1MA2 14 n.s 74.0 Weakly correlated
229 L1P2 14 n.s 28.9 Weakly correlated
230 L1PA14 14 n.s 74.0 Weakly correlated
231 LTR104_Mam 14 n.s 99.0 Highly correlated
232 LTR16A2 14 n.s 99.0 Highly correlated
233 LTR79 14 n.s 99.0 Highly correlated
234 LTR85a 14 * 99.0 Highly correlated
235 MER65C 14 *** 74.0 Weakly correlated
236 MLT1E1A 14 n.s 99.0 Highly correlated
237 MLT2B4 14 n.s 99.0 Highly correlated
238 MLT2F 14 n.s 99.0 Highly correlated
239 MSTA-int 14 n.s 43.0 Weakly correlated
240 MamRep605 14 n.s 99.0 Highly correlated
241 Penelope1_Vert 14 **** 319.0 Weakly correlated
242 CR1_Mam 13 * 99.0 Highly correlated
243 HERVK22-int 13 n.s 43.0 Weakly correlated
244 L1M4a2 13 n.s 99.0 Highly correlated
245 L1M7 13 n.s 99.0 Highly correlated
246 L1MC2 13 n.s 99.0 Highly correlated
247 L1ME5 13 n.s 99.0 Highly correlated
248 L2-1_AMi 13 *** 319.0 Weakly correlated
249 LTR12D 13 n.s 19.6 Weakly correlated
250 LTR16E1 13 n.s 99.0 Highly correlated
251 MER57B2 13 * 43.0 Weakly correlated
252 SVA_C 13 n.s 15.2 Weakly correlated
253 THE1D-int 13 n.s 28.9 Weakly correlated
254 X6B_LINE 13 **** 99.0 Highly correlated
255 L1MDb 12 n.s 99.0 Highly correlated
256 L1ME3E 12 n.s 99.0 Highly correlated
257 L1MEh 12 n.s 99.0 Highly correlated
258 L1PA11 12 n.s 74.0 Weakly correlated
259 LTR33A 12 n.s 99.0 Highly correlated
260 LTR35A 12 **** 43.0 Weakly correlated
261 LTR54 12 * 74.0 Weakly correlated
262 MER4B 12 n.s 74.0 Weakly correlated
263 MER65A 12 n.s 74.0 Weakly correlated
264 MER68 12 n.s 99.0 Highly correlated
265 MER74A 12 n.s 99.0 Highly correlated
266 MLT2C1 12 n.s 99.0 Highly correlated
267 MSTB 12 n.s 43.0 Weakly correlated
268 MamGypsy2-I 12 n.s 99.0 Highly correlated
269 SVA_D 12 n.s 15.2 Weakly correlated
270 X7A_LINE 12 **** 319.0 Weakly correlated
271 AluYk11 11 **** 15.2 Weakly correlated
272 ERV24B_Prim-int 11 ** 74.0 Weakly correlated
273 HERVH48-int 11 * 28.9 Weakly correlated
274 HERVK3-int 11 n.s 28.9 Weakly correlated
275 L1PB2 11 n.s 74.0 Weakly correlated
276 LTR15 11 *** 28.9 Weakly correlated
277 LTR16B2 11 n.s 99.0 Highly correlated
278 LTR1A2 11 n.s 43.0 Weakly correlated
279 LTR26 11 * 74.0 Weakly correlated
280 LTR82A 11 n.s 99.0 Highly correlated
281 MER101-int 11 n.s 74.0 Weakly correlated
282 MER31B 11 n.s 99.0 Highly correlated
283 MER4B-int 11 n.s 99.0 Highly correlated
284 MER51B 11 * 43.0 Weakly correlated
285 MER61-int 11 n.s 43.0 Weakly correlated
286 MSTC 11 n.s 74.0 Weakly correlated
287 SVA_E 11 n.s 0.0 Weakly correlated
288 AluYk4 10 n.s 15.2 Weakly correlated
289 HERVFH21-int 10 ** 28.9 Weakly correlated
290 L1M3c 10 n.s 99.0 Highly correlated
291 L1ME3C 10 n.s 99.0 Highly correlated
292 L1P3 10 n.s 74.0 Weakly correlated
293 L1PB 10 n.s 74.0 Weakly correlated
294 LTR14B 10 ** 28.9 Weakly correlated
295 LTR33A_ 10 n.s 99.0 Highly correlated
296 MER49 10 n.s 43.0 Weakly correlated
297 MER4A 10 n.s 74.0 Weakly correlated
298 MER52A 10 n.s 74.0 Weakly correlated
299 MER77B 10 n.s 99.0 Highly correlated
300 MER90 10 * 99.0 Highly correlated
301 AluYk2 9 n.s 19.6 Weakly correlated
302 ERV24_Prim-int 9 n.s 74.0 Weakly correlated
303 HERVI-int 9 * 28.9 Weakly correlated
304 L1M4a1 9 n.s 99.0 Highly correlated
305 L1MA10 9 n.s 99.0 Highly correlated
306 L1ME3D 9 n.s 99.0 Highly correlated
307 L1PA8A 9 n.s 74.0 Weakly correlated
308 LTR1 9 ** 43.0 Weakly correlated
309 LTR16D 9 n.s 99.0 Highly correlated
310 LTR25 9 ** 43.0 Weakly correlated
311 LTR49-int 9 n.s 74.0 Weakly correlated
312 LTR78B 9 n.s 99.0 Highly correlated
313 LTR7C 9 ** 28.9 Weakly correlated
314 LTR8A 9 n.s 43.0 Weakly correlated
315 MER4A1 9 n.s 74.0 Weakly correlated
316 MER4C 9 n.s 74.0 Weakly correlated
317 MER50-int 9 n.s 43.0 Weakly correlated
318 MER51A 9 n.s 43.0 Weakly correlated
319 MER52D 9 n.s 74.0 Weakly correlated
320 MER54A 9 n.s 87.0 Weakly correlated
321 MER76 9 n.s 99.0 Highly correlated
322 MLT1A1 9 n.s 87.0 Weakly correlated
323 MLT2B3 9 n.s 99.0 Highly correlated
324 MamGypLTR1b 9 n.s 99.0 Highly correlated
325 AluYc3 8 * 74.0 Weakly correlated
326 AluYh3a3 8 *** 15.2 Weakly correlated
327 AluYi6 8 *** 15.2 Weakly correlated
328 AluYk3 8 n.s 19.6 Weakly correlated
329 HERVS71-int 8 n.s 28.9 Weakly correlated
330 L1M6B 8 ** 99.0 Highly correlated
331 L1MA1 8 n.s 74.0 Weakly correlated
332 L1MB1 8 n.s 99.0 Highly correlated
333 L1P4d 8 * 74.0 Weakly correlated
334 LTR10F 8 * 28.9 Weakly correlated
335 LTR25-int 8 n.s 43.0 Weakly correlated
336 LTR33B 8 n.s 99.0 Highly correlated
337 LTR36 8 n.s 74.0 Weakly correlated
338 LTR4 8 **** 28.9 Weakly correlated
339 LTR40b 8 n.s 99.0 Highly correlated
340 LTR48 8 n.s 74.0 Weakly correlated
341 LTR7B 8 n.s 28.9 Weakly correlated
342 LTR88c 8 * 99.0 Highly correlated
343 LTR90A 8 **** 99.0 Highly correlated
344 LTR91 8 **** 99.0 Highly correlated
345 MER39 8 n.s 74.0 Weakly correlated
346 MER4D1 8 n.s 74.0 Weakly correlated
347 MER57-int 8 n.s 87.0 Weakly correlated
348 MER66C 8 * 43.0 Weakly correlated
349 MER67C 8 n.s 99.0 Highly correlated
350 MER90a 8 n.s 99.0 Highly correlated
351 MamRep1151 8 n.s 99.0 Highly correlated
352 SVA_B 8 n.s 15.2 Weakly correlated
353 HERV15-int 7 n.s 28.9 Weakly correlated
354 HERVL-int 7 n.s 74.0 Weakly correlated
355 L1PBa1 7 n.s 74.0 Weakly correlated
356 L5 7 * 99.0 Highly correlated
357 LTR19B 7 * 43.0 Weakly correlated
358 LTR19C 7 *** 43.0 Weakly correlated
359 LTR2 7 n.s 28.9 Weakly correlated
360 LTR26E 7 **** 74.0 Weakly correlated
361 LTR28C 7 n.s 43.0 Weakly correlated
362 LTR37-int 7 n.s 99.0 Highly correlated
363 LTR43 7 n.s 74.0 Weakly correlated
364 LTR44 7 ** 74.0 Weakly correlated
365 LTR7 7 n.s 19.6 Weakly correlated
366 LTR72 7 *** 74.0 Weakly correlated
367 LTR76 7 ** 74.0 Weakly correlated
368 LTR83 7 n.s 99.0 Highly correlated
369 MER110A 7 n.s 99.0 Highly correlated
370 MER21B 7 n.s 99.0 Highly correlated
371 MER31-int 7 n.s 99.0 Highly correlated
372 MER41G 7 **** 74.0 Weakly correlated
373 MER4D 7 n.s 74.0 Weakly correlated
374 MER51E 7 *** 43.0 Weakly correlated
375 MER52C 7 n.s 74.0 Weakly correlated
376 MER54B 7 n.s 87.0 Weakly correlated
377 MER57B1 7 n.s 43.0 Weakly correlated
378 MER61A 7 n.s 43.0 Weakly correlated
379 MER66A 7 * 43.0 Weakly correlated
380 MER67B 7 n.s 99.0 Highly correlated
381 MER83 7 n.s 43.0 Weakly correlated
382 MLT1E3 7 n.s 99.0 Highly correlated
383 MamGyp-int 7 n.s 99.0 Highly correlated
384 PABL_B 7 * 43.0 Weakly correlated
385 THE1B-int 7 n.s 43.0 Weakly correlated
386 X2_LINE 7 **** 319.0 Weakly correlated
387 ERVL-int 6 n.s 99.0 Highly correlated
388 ERVL47-int 6 n.s 74.0 Weakly correlated
389 HERV16-int 6 n.s 99.0 Highly correlated
390 HERVK13-int 6 ** 19.6 Weakly correlated
391 HERVL74-int 6 n.s 99.0 Highly correlated
392 HERVP71A-int 6 n.s 43.0 Weakly correlated
393 L1M3b 6 n.s 99.0 Highly correlated
394 L1M8 6 n.s 99.0 Highly correlated
395 L1MEj 6 n.s 99.0 Highly correlated
396 L1PA12 6 n.s 74.0 Weakly correlated
397 LTR12F 6 n.s 28.9 Weakly correlated
398 LTR54B 6 n.s 74.0 Weakly correlated
399 LTR56 6 n.s 74.0 Weakly correlated
400 LTR62 6 n.s 74.0 Weakly correlated
401 LTR64 6 * 74.0 Weakly correlated
402 LTR73 6 ** 99.0 Highly correlated
403 LTR75 6 * 99.0 Highly correlated
404 LTR81B 6 n.s 99.0 Highly correlated
405 LTR9D 6 n.s 43.0 Weakly correlated
406 MER110 6 n.s 99.0 Highly correlated
407 MER110-int 6 n.s 99.0 Highly correlated
408 MER21-int 6 n.s 99.0 Highly correlated
409 MER34A1 6 n.s 99.0 Highly correlated
410 MER41C 6 n.s 74.0 Weakly correlated
411 MER51C 6 ** 43.0 Weakly correlated
412 MER67A 6 * 99.0 Highly correlated
413 MamGypLTR2b 6 n.s 99.0 Highly correlated
414 Mam_R4 6 * 99.0 Highly correlated
415 PrimLTR79 6 **** 74.0 Weakly correlated
416 SVA_F 6 n.s 0.0 Weakly correlated
417 X7C_LINE 6 ** 319.0 Weakly correlated
418 AluYg6 5 n.s 15.2 Weakly correlated
419 HERV30-int 5 n.s 28.9 Weakly correlated
420 HERVK11-int 5 n.s 28.9 Weakly correlated
421 L1M 5 * 74.0 Weakly correlated
422 L1MEb 5 n.s 99.0 Highly correlated
423 LOR1b 5 n.s 74.0 Weakly correlated
424 LTR101_Mam 5 n.s 99.0 Highly correlated
425 LTR103b_Mam 5 * 99.0 Highly correlated
426 LTR10B 5 *** 28.9 Weakly correlated
427 LTR16B 5 n.s 99.0 Highly correlated
428 LTR16B1 5 n.s 99.0 Highly correlated
429 LTR19A 5 n.s 43.0 Weakly correlated
430 LTR1A1 5 n.s 43.0 Weakly correlated
431 LTR24B 5 n.s 74.0 Weakly correlated
432 LTR26D 5 * 0.0 Weakly correlated
433 LTR27E 5 n.s 43.0 Weakly correlated
434 LTR35 5 *** 43.0 Weakly correlated
435 LTR3B_ 5 * 28.9 Weakly correlated
436 LTR43-int 5 * 74.0 Weakly correlated
437 LTR45B 5 n.s 74.0 Weakly correlated
438 LTR46 5 * 43.0 Weakly correlated
439 LTR52 5 n.s 99.0 Highly correlated
440 LTR60B 5 * 74.0 Weakly correlated
441 LTR82B 5 n.s 99.0 Highly correlated
442 LTR84b 5 n.s 99.0 Highly correlated
443 LTR85c 5 n.s 99.0 Highly correlated
444 LTR89 5 n.s 99.0 Highly correlated
445 MER101 5 n.s 74.0 Weakly correlated
446 MER34A 5 n.s 99.0 Highly correlated
447 MER41D 5 n.s 74.0 Weakly correlated
448 MER4CL34 5 n.s 43.0 Weakly correlated
449 MER51D 5 *** 43.0 Weakly correlated
450 MER57C2 5 n.s 87.0 Weakly correlated
451 MER61B 5 n.s 43.0 Weakly correlated
452 MER61C 5 n.s 43.0 Weakly correlated
453 MER65-int 5 n.s 87.0 Weakly correlated
454 MER67D 5 n.s 99.0 Highly correlated
455 MER88 5 *** 99.0 Highly correlated
456 MLT1I-int 5 n.s 99.0 Highly correlated
457 MLT2B1 5 n.s 99.0 Highly correlated
458 MLT2B2 5 n.s 99.0 Highly correlated
459 MLT2C2 5 n.s 99.0 Highly correlated
460 MamGypLTR1a 5 n.s 99.0 Highly correlated
461 X9_LINE 5 ** 319.0 Weakly correlated
462 CR1-L3A_Croc 4 ** 319.0 Weakly correlated
463 ERV3-16A3_LTR 4 n.s 99.0 Highly correlated
464 HERV4_I-int 4 n.s 43.0 Weakly correlated
465 HERVIP10F-int 4 n.s 28.9 Weakly correlated
466 HERVKC4-int 4 n.s 28.9 Weakly correlated
467 L1M2a 4 n.s 87.0 Weakly correlated
468 L1M2c 4 n.s 87.0 Weakly correlated
469 L1MEg2 4 n.s 99.0 Highly correlated
470 L1PBb 4 n.s 74.0 Weakly correlated
471 LOR1-int 4 n.s 74.0 Weakly correlated
472 LTR106_Mam 4 n.s 99.0 Highly correlated
473 LTR10D 4 * 28.9 Weakly correlated
474 LTR13A 4 n.s 28.9 Weakly correlated
475 LTR16D1 4 * 99.0 Highly correlated
476 LTR1E 4 n.s 43.0 Weakly correlated
477 LTR22B2 4 **** 28.9 Weakly correlated
478 LTR24 4 n.s 74.0 Weakly correlated
479 LTR33C 4 n.s 99.0 Highly correlated
480 LTR3B 4 ** 28.9 Weakly correlated
481 LTR51 4 n.s 74.0 Weakly correlated
482 LTR61 4 * 43.0 Weakly correlated
483 LTR71A 4 * 43.0 Weakly correlated
484 LTR81 4 * 99.0 Highly correlated
485 LTR9B 4 n.s 43.0 Weakly correlated
486 MER11A 4 n.s 28.9 Weakly correlated
487 MER11C 4 n.s 19.6 Weakly correlated
488 MER31A 4 n.s 87.0 Weakly correlated
489 MER34C2 4 n.s 74.0 Weakly correlated
490 MER57F 4 n.s 74.0 Weakly correlated
491 MER65D 4 n.s 87.0 Weakly correlated
492 MER66-int 4 n.s 43.0 Weakly correlated
493 MER74B 4 n.s 99.0 Highly correlated
494 MER77 4 n.s 99.0 Highly correlated
495 MER87B 4 * 74.0 Weakly correlated
496 MLT1D-int 4 n.s 99.0 Highly correlated
497 MLT2A2 4 n.s 74.0 Weakly correlated
498 MamRep1527 4 n.s 99.0 Highly correlated
499 THE1C-int 4 n.s 43.0 Weakly correlated
500 AluYe6 3 n.s 74.0 Weakly correlated
501 HERVE-int 3 n.s 19.6 Weakly correlated
502 L1M2b 3 n.s 87.0 Weakly correlated
503 L1MCb 3 n.s 99.0 Highly correlated
504 LTR12 3 n.s 28.9 Weakly correlated
505 LTR14C 3 n.s 28.9 Weakly correlated
506 LTR21A 3 * 28.9 Weakly correlated
507 LTR22B 3 n.s 28.9 Weakly correlated
508 LTR23 3 n.s 74.0 Weakly correlated
509 LTR27 3 n.s 43.0 Weakly correlated
510 LTR32 3 n.s 43.0 Weakly correlated
511 LTR34 3 n.s 74.0 Weakly correlated
512 LTR40c 3 n.s 99.0 Highly correlated
513 LTR75B 3 n.s 99.0 Highly correlated
514 LTR81A 3 n.s 99.0 Highly correlated
515 LTR84a 3 n.s 99.0 Highly correlated
516 LTR85b 3 n.s 99.0 Highly correlated
517 LTR87 3 n.s 99.0 Highly correlated
518 LTR9A1 3 n.s 43.0 Weakly correlated
519 LTR9C 3 n.s 43.0 Weakly correlated
520 MER129 3 ** 319.0 Weakly correlated
521 MER21A 3 n.s 74.0 Weakly correlated
522 MER34 3 n.s 87.0 Weakly correlated
523 MER34B-int 3 n.s 99.0 Highly correlated
524 MER34D 3 n.s 74.0 Weakly correlated
525 MER39B 3 n.s 74.0 Weakly correlated
526 MER4D0 3 n.s 74.0 Weakly correlated
527 MER51-int 3 n.s 43.0 Weakly correlated
528 MER52-int 3 n.s 99.0 Highly correlated
529 MER57A1 3 n.s 43.0 Weakly correlated
530 MER57E1 3 n.s 87.0 Weakly correlated
531 MER61D 3 n.s 43.0 Weakly correlated
532 MER68B 3 n.s 99.0 Highly correlated
533 MER72B 3 n.s 43.0 Weakly correlated
534 MER74C 3 n.s 99.0 Highly correlated
535 MER92B 3 n.s 99.0 Highly correlated
536 MER9a3 3 n.s 28.9 Weakly correlated
537 MLT1C-int 3 n.s 94.0 Weakly correlated
538 MSTA1 3 n.s 74.0 Weakly correlated
539 MSTB-int 3 n.s 43.0 Weakly correlated
540 MamGypLTR1d 3 n.s 99.0 Highly correlated
541 MamGypLTR2c 3 n.s 99.0 Highly correlated
542 PABL_A 3 n.s 43.0 Weakly correlated
543 UCON86 3 *** 319.0 Weakly correlated
544 AluYa8 2 n.s 15.2 Weakly correlated
545 AluYb9 2 n.s 15.2 Weakly correlated
546 AluYh9 2 ** 15.2 Weakly correlated
547 AluYk12 2 n.s 15.2 Weakly correlated
548 HERV9NC-int 2 n.s 19.6 Weakly correlated
549 HERVIP10B3-int 2 n.s 28.9 Weakly correlated
550 HERVK11D-int 2 n.s 19.6 Weakly correlated
551 HERVK14C-int 2 n.s 28.9 Weakly correlated
552 HERVK9-int 2 n.s 28.9 Weakly correlated
553 L1MEa 2 n.s 99.0 Highly correlated
554 L1P4b 2 n.s 74.0 Weakly correlated
555 LTR06 2 * 74.0 Weakly correlated
556 LTR10B1 2 n.s 28.9 Weakly correlated
557 LTR10C 2 n.s 28.9 Weakly correlated
558 LTR12_ 2 n.s 28.9 Weakly correlated
559 LTR16D2 2 n.s 99.0 Highly correlated
560 LTR1D 2 n.s 43.0 Weakly correlated
561 LTR23-int 2 n.s 74.0 Weakly correlated
562 LTR26C 2 n.s 0.0 Weakly correlated
563 LTR3 2 n.s 28.9 Weakly correlated
564 LTR30 2 n.s 28.9 Weakly correlated
565 LTR39-int 2 n.s 43.0 Weakly correlated
566 LTR40A1 2 n.s 99.0 Highly correlated
567 LTR40a 2 n.s 99.0 Highly correlated
568 LTR47B4 2 n.s 74.0 Weakly correlated
569 LTR49 2 n.s 74.0 Weakly correlated
570 LTR52-int 2 n.s 99.0 Highly correlated
571 LTR53 2 n.s 99.0 Highly correlated
572 LTR53B 2 n.s 99.0 Highly correlated
573 LTR57 2 n.s 74.0 Weakly correlated
574 LTR5A 2 n.s 19.6 Weakly correlated
575 LTR5B 2 n.s 28.9 Weakly correlated
576 LTR60 2 ** 43.0 Weakly correlated
577 LTR68 2 n.s 99.0 Highly correlated
578 LTR6B 2 n.s 19.6 Weakly correlated
579 LTR80B 2 n.s 99.0 Highly correlated
580 LTR86C 2 n.s 99.0 Highly correlated
581 MER11B 2 n.s 19.6 Weakly correlated
582 MER41-int 2 n.s 74.0 Weakly correlated
583 MER41E 2 n.s 74.0 Weakly correlated
584 MER4E1 2 n.s 74.0 Weakly correlated
585 MER57A-int 2 n.s 43.0 Weakly correlated
586 MER61F 2 n.s 43.0 Weakly correlated
587 MER65B 2 n.s 74.0 Weakly correlated
588 MER68-int 2 n.s 99.0 Highly correlated
589 MER70A 2 n.s 87.0 Weakly correlated
590 MER72 2 n.s 43.0 Weakly correlated
591 MER73 2 n.s 87.0 Weakly correlated
592 MER92C 2 n.s 99.0 Highly correlated
593 MER95 2 n.s 99.0 Highly correlated
594 MLT1A-int 2 n.s 99.0 Highly correlated
595 MLT1A0-int 2 n.s 99.0 Highly correlated
596 MLT1G-int 2 n.s 99.0 Highly correlated
597 MLT1J-int 2 n.s 99.0 Highly correlated
598 MLT1J1-int 2 n.s 99.0 Highly correlated
599 MLT1L-int 2 * 99.0 Highly correlated
600 MLT2B5 2 n.s 87.0 Weakly correlated
601 MLT2E 2 n.s 99.0 Highly correlated
602 MST-int 2 n.s 74.0 Weakly correlated
603 PABL_A-int 2 n.s 74.0 Weakly correlated
604 PABL_B-int 2 n.s 74.0 Weakly correlated
605 X7B_LINE 2 n.s 319.0 Weakly correlated
606 AluYd8 1 n.s 15.2 Weakly correlated
607 CR1-16_AMi 1 n.s 319.0 Weakly correlated
608 HERV3-int 1 n.s 28.9 Weakly correlated
609 HERV35I-int 1 n.s 43.0 Weakly correlated
610 HERV9-int 1 n.s 28.9 Weakly correlated
611 HERV9N-int 1 n.s 19.6 Weakly correlated
612 HUERS-P2-int 1 n.s 43.0 Weakly correlated
613 Harlequin-int 1 n.s 74.0 Weakly correlated
614 L1M3a 1 n.s 99.0 Highly correlated
615 L1M3de 1 n.s 99.0 Highly correlated
616 L1P5 1 n.s 74.0 Weakly correlated
617 L2-1_Crp 1 * 319.0 Weakly correlated
618 LTR102_Mam 1 n.s 99.0 Highly correlated
619 LTR103_Mam 1 n.s 99.0 Highly correlated
620 LTR105_Mam 1 n.s 99.0 Highly correlated
621 LTR10B2 1 n.s 28.9 Weakly correlated
622 LTR14 1 n.s 28.9 Weakly correlated
623 LTR18C 1 n.s 43.0 Weakly correlated
624 LTR1B1 1 n.s 43.0 Weakly correlated
625 LTR22C0 1 n.s 28.9 Weakly correlated
626 LTR24C 1 n.s 74.0 Weakly correlated
627 LTR26B 1 n.s 74.0 Weakly correlated
628 LTR2752 1 n.s 43.0 Weakly correlated
629 LTR27D 1 n.s 43.0 Weakly correlated
630 LTR29 1 n.s 43.0 Weakly correlated
631 LTR2B 1 n.s 19.6 Weakly correlated
632 LTR38 1 n.s 74.0 Weakly correlated
633 LTR39 1 n.s 43.0 Weakly correlated
634 LTR43B 1 n.s 74.0 Weakly correlated
635 LTR47A2 1 n.s 74.0 Weakly correlated
636 LTR47B2 1 n.s 74.0 Weakly correlated
637 LTR53-int 1 n.s 99.0 Highly correlated
638 LTR66 1 n.s 43.0 Weakly correlated
639 LTR6A 1 n.s 28.9 Weakly correlated
640 LTR72B 1 n.s 74.0 Weakly correlated
641 LTR75_1 1 n.s 99.0 Highly correlated
642 LTR81C 1 n.s 99.0 Highly correlated
643 LTR86A1 1 n.s 99.0 Highly correlated
644 LTR86A2 1 n.s 99.0 Highly correlated
645 LTR90B 1 n.s 99.0 Highly correlated
646 MER101B 1 n.s 87.0 Weakly correlated
647 MER34B 1 n.s 87.0 Weakly correlated
648 MER4A1_ 1 n.s 74.0 Weakly correlated
649 MER61E 1 n.s 43.0 Weakly correlated
650 MER66D 1 n.s 43.0 Weakly correlated
651 MER70-int 1 n.s 99.0 Highly correlated
652 MER83A-int 1 n.s 99.0 Highly correlated
653 MER83B-int 1 n.s 99.0 Highly correlated
654 MER84 1 n.s 43.0 Weakly correlated
655 MER84-int 1 n.s 74.0 Weakly correlated
656 MLT1-int 1 n.s 99.0 Highly correlated
657 MLT1E 1 n.s 99.0 Highly correlated
658 MLT1E1 1 n.s 99.0 Highly correlated
659 MLT1F2-int 1 n.s 99.0 Highly correlated
660 MLT1G3-int 1 n.s 99.0 Highly correlated
661 MLT1H2-int 1 n.s 99.0 Highly correlated
662 MLT1K-int 1 n.s 99.0 Highly correlated
663 MSTB2-int 1 n.s 74.0 Weakly correlated
664 MamGypLTR1c 1 n.s 99.0 Highly correlated
665 PRIMA41-int 1 n.s 74.0 Weakly correlated
666 THE1A 1 n.s 43.0 Weakly correlated
667 UCON51 1 ** 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 LTR13 135 **** 19.6 Weakly correlated
2 L2a 86 n.s 99.0 Highly correlated
3 MIRb 66 n.s 99.0 Highly correlated
4 L2b 63 n.s 99.0 Highly correlated
5 L2c 58 n.s 99.0 Highly correlated
6 MIR 36 n.s 99.0 Highly correlated
7 LTR41B 34 **** 99.0 Highly correlated
8 L1PA15-16 33 n.s 74.0 Weakly correlated
9 LTR41 33 **** 99.0 Highly correlated
10 L2 32 n.s 99.0 Highly correlated
11 L1PB1 31 n.s 74.0 Weakly correlated
12 AluY 25 n.s 74.0 Weakly correlated
13 LTR50 25 * 99.0 Highly correlated
14 LTR41C 24 **** 99.0 Highly correlated
15 L1PA3 23 n.s 19.6 Weakly correlated
16 AluSx1 22 n.s 74.0 Weakly correlated
17 L1PA16 21 n.s 74.0 Weakly correlated
18 MIRc 21 n.s 99.0 Highly correlated
19 HUERS-P3-int 20 n.s 43.0 Weakly correlated
20 L1MC4 20 n.s 99.0 Highly correlated
21 MIR3 20 n.s 99.0 Highly correlated
22 LTR13_ 18 **** 28.9 Weakly correlated
23 AluJb 18 n.s 74.0 Weakly correlated
24 AluSx 18 n.s 74.0 Weakly correlated
25 L1PA2 17 n.s 15.2 Weakly correlated
26 MamGypLTR3a 17 *** 99.0 Highly correlated
27 HERVK-int 17 n.s 28.9 Weakly correlated
28 AluSz 15 n.s 74.0 Weakly correlated
29 L1MA4 15 n.s 87.0 Weakly correlated
30 HUERS-P3b-int 15 n.s 43.0 Weakly correlated
31 L1M3f 14 n.s 87.0 Weakly correlated
32 LTR55 12 *** 99.0 Highly correlated
33 L1PB4 11 n.s 99.0 Highly correlated
34 L1PBa 10 n.s 74.0 Weakly correlated
35 L1PA17 10 n.s 74.0 Weakly correlated
36 MLT1C 10 n.s 94.0 Weakly correlated
37 AluSc 9 n.s 74.0 Weakly correlated
38 L1M1 9 n.s 74.0 Weakly correlated
39 AluJo 9 n.s 74.0 Weakly correlated
40 MamGypLTR3 8 ** 99.0 Highly correlated
41 L1MB3 8 n.s 99.0 Highly correlated
42 AmnSINE1 8 n.s 319.0 Weakly correlated
43 L3 8 n.s 99.0 Highly correlated
44 L1MA3 7 n.s 74.0 Weakly correlated
45 L1MC4a 7 n.s 99.0 Highly correlated
46 MamRTE1 7 n.s 99.0 Highly correlated
47 LTR1 7 * 43.0 Weakly correlated
48 L1PA7 6 n.s 74.0 Weakly correlated
49 MLT1D 6 n.s 99.0 Highly correlated
50 MLT1I 6 n.s 99.0 Highly correlated
51 L1M5 6 n.s 99.0 Highly correlated
52 AluJr 5 n.s 74.0 Weakly correlated
53 ERVL-E-int 5 n.s 99.0 Highly correlated
54 L1PA6 5 n.s 28.9 Weakly correlated
55 MLT1K 5 n.s 99.0 Highly correlated
56 MLT1B 5 n.s 99.0 Highly correlated
57 LTR7C 5 n.s 28.9 Weakly correlated
58 MLT1N2 5 n.s 99.0 Highly correlated
59 L1MEf 5 n.s 99.0 Highly correlated
60 AluSg 5 n.s 74.0 Weakly correlated
61 AluSx3 5 n.s 74.0 Weakly correlated
62 L1P4a 5 n.s 74.0 Weakly correlated
63 LTR33 5 n.s 99.0 Highly correlated
64 HERVH48-int 5 n.s 28.9 Weakly correlated
65 L1MB5 5 n.s 99.0 Highly correlated
66 L1ME2 5 n.s 99.0 Highly correlated
67 LTR12C 5 n.s 19.6 Weakly correlated
68 L1M4 4 n.s 99.0 Highly correlated
69 LTR35A 4 ** 43.0 Weakly correlated
70 MER41B 4 n.s 74.0 Weakly correlated
71 MER66C 4 n.s 43.0 Weakly correlated
72 MLT1L 4 n.s 99.0 Highly correlated
73 ERV3-16A3_I-int 4 n.s 99.0 Highly correlated
74 L1ME4b 4 n.s 99.0 Highly correlated
75 AluSc8 4 n.s 74.0 Weakly correlated
76 HERVI-int 4 n.s 28.9 Weakly correlated
77 LTR16 4 n.s 99.0 Highly correlated
78 HAL1M8 4 n.s 99.0 Highly correlated
79 L1MB7 4 n.s 99.0 Highly correlated
80 AluSz6 4 n.s 74.0 Weakly correlated
81 AluSg4 3 n.s 74.0 Weakly correlated
82 AluSq2 3 n.s 74.0 Weakly correlated
83 L1P4d 3 n.s 74.0 Weakly correlated
84 L1PA4 3 n.s 19.6 Weakly correlated
85 MLT1H2 3 n.s 99.0 Highly correlated
86 ERV24B_Prim-int 3 n.s 74.0 Weakly correlated
87 HAL1 3 n.s 99.0 Highly correlated
88 L1M7 3 n.s 99.0 Highly correlated
89 LTR16C 3 n.s 99.0 Highly correlated
90 L1MC5a 3 n.s 99.0 Highly correlated
91 L1ME3B 3 n.s 99.0 Highly correlated
92 L1PBa1 3 n.s 74.0 Weakly correlated
93 MLT1J 3 n.s 99.0 Highly correlated
94 L1ME4a 3 n.s 99.0 Highly correlated
95 L1PA15 3 n.s 74.0 Weakly correlated
96 LFSINE_Vert 3 n.s 319.0 Weakly correlated
97 LTR16A2 3 n.s 99.0 Highly correlated
98 L1MA6 3 n.s 87.0 Weakly correlated
99 LTR12E 3 n.s 19.6 Weakly correlated
100 LTR1A2 3 n.s 43.0 Weakly correlated
101 MLT1H 3 n.s 99.0 Highly correlated
102 L1M2 3 n.s 99.0 Highly correlated
103 L1M3e 3 n.s 99.0 Highly correlated
104 LTR25-int 3 n.s 43.0 Weakly correlated
105 MLT1J1 3 n.s 99.0 Highly correlated
106 AluSq 3 n.s 74.0 Weakly correlated
107 HERVS71-int 3 n.s 28.9 Weakly correlated
108 L1MEd 3 n.s 99.0 Highly correlated
109 LTR48 3 n.s 74.0 Weakly correlated
110 LTR78 3 n.s 99.0 Highly correlated
111 MER52A 3 n.s 74.0 Weakly correlated
112 MLT1G3 3 n.s 99.0 Highly correlated
113 AluSp 3 n.s 74.0 Weakly correlated
114 LTR28C 3 n.s 43.0 Weakly correlated
115 FRAM 2 n.s 74.0 Weakly correlated
116 HERV16-int 2 n.s 99.0 Highly correlated
117 HERVIP10F-int 2 n.s 28.9 Weakly correlated
118 LTR82A 2 n.s 99.0 Highly correlated
119 LTR88a 2 n.s 99.0 Highly correlated
120 MamSINE1 2 n.s 99.0 Highly correlated
121 L1MCc 2 n.s 99.0 Highly correlated
122 LTR16A1 2 n.s 99.0 Highly correlated
123 MER21C 2 n.s 99.0 Highly correlated
124 MLT1A0 2 n.s 99.0 Highly correlated
125 L1PREC2 2 n.s 43.0 Weakly correlated
126 MER90a 2 n.s 99.0 Highly correlated
127 Alu 2 n.s 74.0 Weakly correlated
128 L1PA10 2 n.s 74.0 Weakly correlated
129 L1PBb 2 n.s 74.0 Weakly correlated
130 LTR14B 2 n.s 28.9 Weakly correlated
131 LTR33A 2 n.s 99.0 Highly correlated
132 LTR43-int 2 n.s 74.0 Weakly correlated
133 MLT1E1A 2 n.s 99.0 Highly correlated
134 MLT1J2 2 n.s 99.0 Highly correlated
135 AluSg7 2 n.s 74.0 Weakly correlated
136 HERVL18-int 2 n.s 43.0 Weakly correlated
137 L1ME1 2 n.s 99.0 Highly correlated
138 L3b 2 n.s 99.0 Highly correlated
139 LOR1b 2 n.s 74.0 Weakly correlated
140 LTR16E1 2 n.s 99.0 Highly correlated
141 LTR73 2 n.s 99.0 Highly correlated
142 LTR8 2 n.s 43.0 Weakly correlated
143 L1ME3G 2 n.s 99.0 Highly correlated
144 L1PA5 2 n.s 19.6 Weakly correlated
145 LTR12D 2 n.s 19.6 Weakly correlated
146 LTR33C 2 n.s 99.0 Highly correlated
147 MamGypsy2-LTR 2 n.s 99.0 Highly correlated
148 AluSc5 2 n.s 74.0 Weakly correlated
149 CR1_Mam 2 n.s 99.0 Highly correlated
150 HERVKC4-int 2 n.s 28.9 Weakly correlated
151 L1ME3 2 n.s 99.0 Highly correlated
152 L1MEc 2 n.s 99.0 Highly correlated
153 L4_A_Mam 2 n.s 99.0 Highly correlated
154 LTR1A1 2 n.s 43.0 Weakly correlated
155 LTR35 2 n.s 43.0 Weakly correlated
156 LTR88b 2 n.s 99.0 Highly correlated
157 MLT1A 2 n.s 99.0 Highly correlated
158 MLT1F 2 n.s 99.0 Highly correlated
159 ERV24_Prim-int 2 n.s 74.0 Weakly correlated
160 L1MA4A 2 n.s 87.0 Weakly correlated
161 L1MD2 2 n.s 99.0 Highly correlated
162 MER90 2 n.s 99.0 Highly correlated
163 AluSx4 1 n.s 74.0 Weakly correlated
164 L1MA9 1 n.s 99.0 Highly correlated
165 L1PA12 1 n.s 74.0 Weakly correlated
166 L1PB2 1 n.s 74.0 Weakly correlated
167 LTR104_Mam 1 n.s 99.0 Highly correlated
168 LTR16E2 1 n.s 99.0 Highly correlated
169 LTR37B 1 n.s 99.0 Highly correlated
170 LTR84a 1 n.s 99.0 Highly correlated
171 MER31-int 1 n.s 99.0 Highly correlated
172 MER34D 1 n.s 74.0 Weakly correlated
173 MER4D 1 n.s 74.0 Weakly correlated
174 MER52-int 1 n.s 99.0 Highly correlated
175 MER65-int 1 n.s 87.0 Weakly correlated
176 MLT1A-int 1 n.s 99.0 Highly correlated
177 Penelope1_Vert 1 n.s 319.0 Weakly correlated
178 THE1D 1 n.s 43.0 Weakly correlated
179 AluYm1 1 n.s 19.6 Weakly correlated
180 L1HS 1 n.s 8.6 Weakly correlated
181 L1MC1 1 n.s 99.0 Highly correlated
182 L1MEa 1 n.s 99.0 Highly correlated
183 L1PA13 1 n.s 74.0 Weakly correlated
184 L1PA8 1 n.s 74.0 Weakly correlated
185 L1PB 1 n.s 74.0 Weakly correlated
186 LTR16D 1 n.s 99.0 Highly correlated
187 LTR36 1 n.s 74.0 Weakly correlated
188 LTR40a 1 n.s 99.0 Highly correlated
189 LTR53B 1 n.s 99.0 Highly correlated
190 MER49 1 n.s 43.0 Weakly correlated
191 MER4B 1 n.s 74.0 Weakly correlated
192 MER61-int 1 n.s 43.0 Weakly correlated
193 MER66B 1 n.s 43.0 Weakly correlated
194 MER67B 1 n.s 99.0 Highly correlated
195 MLT1F2 1 n.s 99.0 Highly correlated
196 MLT1O 1 n.s 99.0 Highly correlated
197 MSTB1 1 n.s 74.0 Weakly correlated
198 MSTD 1 n.s 74.0 Weakly correlated
199 SVA_A 1 n.s 19.6 Weakly correlated
200 THE1B-int 1 n.s 43.0 Weakly correlated
201 AluJr4 1 n.s 74.0 Weakly correlated
202 HERV30-int 1 n.s 28.9 Weakly correlated
203 HERVIP10FH-int 1 n.s 28.9 Weakly correlated
204 L1MA5 1 n.s 87.0 Weakly correlated
205 L1ME3A 1 n.s 99.0 Highly correlated
206 L1PA8A 1 n.s 74.0 Weakly correlated
207 LTR1D 1 n.s 43.0 Weakly correlated
208 LTR71B 1 n.s 43.0 Weakly correlated
209 LTR86A1 1 n.s 99.0 Highly correlated
210 LTR8A 1 n.s 43.0 Weakly correlated
211 MER41A 1 n.s 74.0 Weakly correlated
212 MER54B 1 n.s 87.0 Weakly correlated
213 MER77B 1 n.s 99.0 Highly correlated
214 MLT1E 1 n.s 99.0 Highly correlated
215 L1M4a2 1 n.s 99.0 Highly correlated
216 L1MC 1 n.s 99.0 Highly correlated
217 L1MD1 1 n.s 99.0 Highly correlated
218 L1ME3E 1 n.s 99.0 Highly correlated
219 LTR18B 1 n.s 43.0 Weakly correlated
220 LTR40c 1 n.s 99.0 Highly correlated
221 LTR52-int 1 n.s 99.0 Highly correlated
222 MER50-int 1 n.s 43.0 Weakly correlated
223 MER61C 1 n.s 43.0 Weakly correlated
224 MER84-int 1 n.s 74.0 Weakly correlated
225 MLT1I-int 1 n.s 99.0 Highly correlated
226 PABL_B-int 1 n.s 74.0 Weakly correlated
227 AluYf1 1 n.s 19.6 Weakly correlated
228 FLAM_C 1 n.s 74.0 Weakly correlated
229 HERVL40-int 1 n.s 99.0 Highly correlated
230 L1M4b 1 n.s 99.0 Highly correlated
231 L1M8 1 n.s 99.0 Highly correlated
232 L1MA5A 1 n.s 87.0 Weakly correlated
233 L1MC3 1 n.s 99.0 Highly correlated
234 L1P4b 1 n.s 74.0 Weakly correlated
235 LTR13A 1 n.s 28.9 Weakly correlated
236 LTR37A 1 n.s 99.0 Highly correlated
237 LTR75_1 1 n.s 99.0 Highly correlated
238 MER52C 1 n.s 74.0 Weakly correlated
239 MER61A 1 n.s 43.0 Weakly correlated
240 MER66-int 1 n.s 43.0 Weakly correlated
241 MER68 1 n.s 99.0 Highly correlated
242 MLT1F1 1 n.s 99.0 Highly correlated
243 AmnSINE2 1 n.s 319.0 Weakly correlated
244 L1MB2 1 n.s 99.0 Highly correlated
245 L1MDb 1 n.s 99.0 Highly correlated
246 L1ME3Cz 1 n.s 99.0 Highly correlated
247 LTR19B 1 n.s 43.0 Weakly correlated
248 LTR72 1 n.s 74.0 Weakly correlated
249 LTR75 1 n.s 99.0 Highly correlated
250 LTR85a 1 n.s 99.0 Highly correlated
251 LTR9D 1 n.s 43.0 Weakly correlated
252 MER21-int 1 n.s 99.0 Highly correlated
253 MER50 1 n.s 43.0 Weakly correlated
254 MER51B 1 n.s 43.0 Weakly correlated
255 MER54A 1 n.s 87.0 Weakly correlated
256 MER66D 1 n.s 43.0 Weakly correlated
257 MER76 1 n.s 99.0 Highly correlated
258 MLT1H1 1 n.s 99.0 Highly correlated
259 MLT2A2 1 n.s 74.0 Weakly correlated
260 UCON51 1 ** 319.0 Weakly correlated
261 ERV3-16A3_LTR 1 n.s 99.0 Highly correlated
262 FLAM_A 1 n.s 74.0 Weakly correlated
263 HERV17-int 1 n.s 28.9 Weakly correlated
264 HERVK11-int 1 n.s 28.9 Weakly correlated
265 HERVK11D-int 1 n.s 19.6 Weakly correlated
266 L1M4c 1 n.s 99.0 Highly correlated
267 L1MA7 1 n.s 87.0 Weakly correlated
268 L1MD3 1 n.s 99.0 Highly correlated
269 L1MDa 1 n.s 99.0 Highly correlated
270 L1MEb 1 n.s 99.0 Highly correlated
271 L1MEi 1 n.s 99.0 Highly correlated
272 L1PB3 1 n.s 74.0 Weakly correlated
273 LTR103b_Mam 1 n.s 99.0 Highly correlated
274 LTR16B1 1 n.s 99.0 Highly correlated
275 LTR16B2 1 n.s 99.0 Highly correlated
276 LTR22B 1 n.s 28.9 Weakly correlated
277 LTR8B 1 n.s 43.0 Weakly correlated
278 MER72B 1 n.s 43.0 Weakly correlated
279 MLT1A1 1 n.s 87.0 Weakly correlated
280 MLT1E2 1 n.s 99.0 Highly correlated
281 MLT1K-int 1 n.s 99.0 Highly correlated
282 MLT2D 1 n.s 99.0 Highly correlated
283 MSTB 1 n.s 43.0 Weakly correlated
284 SVA_F 1 n.s 0.0 Weakly correlated
285 THE1C-int 1 n.s 43.0 Weakly correlated
286 AluYa5 1 n.s 15.2 Weakly correlated
287 HERVK14C-int 1 n.s 28.9 Weakly correlated
288 HERVL-int 1 n.s 74.0 Weakly correlated
289 HUERS-P2-int 1 n.s 43.0 Weakly correlated
290 L1MC5 1 n.s 99.0 Highly correlated
291 L1ME3F 1 n.s 99.0 Highly correlated
292 L1MEg 1 n.s 99.0 Highly correlated
293 L1PA14 1 n.s 74.0 Weakly correlated
294 LTR33A_ 1 n.s 99.0 Highly correlated
295 LTR81B 1 n.s 99.0 Highly correlated
296 LTR85c 1 n.s 99.0 Highly correlated
297 MER101B 1 n.s 87.0 Weakly correlated
298 MER34B-int 1 n.s 99.0 Highly correlated
299 MER4A 1 n.s 74.0 Weakly correlated
300 MER4C 1 n.s 74.0 Weakly correlated
301 MIR1_Amn 1 n.s 319.0 Weakly correlated
302 MamGypLTR1b 1 n.s 99.0 Highly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUSX1 74.0 Weakly correlated
2 AMNSINE1 319.0 Weakly correlated
3 HERVK-INT 28.9 Weakly correlated
4 HUERS-P3-INT 43.0 Weakly correlated
5 HUERS-P3B-INT 43.0 Weakly correlated
6 L1M1 74.0 Weakly correlated
7 L1M3F 87.0 Weakly correlated
8 L1MA3 74.0 Weakly correlated
9 L1MA4 87.0 Weakly correlated
10 L1MB3 99.0 Highly correlated
11 L1MC4A 99.0 Highly correlated
12 L1PA15-16 74.0 Weakly correlated
13 L1PA16 74.0 Weakly correlated
14 L1PA17 74.0 Weakly correlated
15 L1PB1 74.0 Weakly correlated
16 L1PB4 99.0 Highly correlated
17 L1PBA 74.0 Weakly correlated
18 L2 99.0 Highly correlated
19 L2B 99.0 Highly correlated
20 L2C 99.0 Highly correlated
21 L3 99.0 Highly correlated
22 LTR1 43.0 Weakly correlated
23 LTR13 19.6 Weakly correlated
24 LTR13_ 28.9 Weakly correlated
25 LTR41 99.0 Highly correlated
26 LTR41B 99.0 Highly correlated
27 LTR41C 99.0 Highly correlated
28 LTR50 99.0 Highly correlated
29 LTR55 99.0 Highly correlated
30 MIR3 99.0 Highly correlated
31 MLT1D 99.0 Highly correlated
32 MLT1I 99.0 Highly correlated
33 MAMGYPLTR3 99.0 Highly correlated
34 MAMGYPLTR3A 99.0 Highly correlated
35 MAMRTE1 99.0 Highly correlated