ZRdb KZFP & Repeats
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Human_ZNF394

  • Protein
    Zinc finger protein 394
  • Length
    561
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    99.0 Mya
  • Uniprot_ID
    Q53GI3
  • NCBI_ID
    84124
Sequence:
MNSSLTAQRRGSDAELGPWVMAARSKDAAPSQRDGLLPVKVEEDSPGSWEPNYPAASPDPETSRLHFRQLRYQEVAGPEEALSRLRELCRRWLRPELLSKEQILELLVLEQFLTILPEELQAWVREHCPESGEEAVAVVRALQRALDGTSSQGMVTFEDTAVSLTWEEWERLDPARRDFCRESAQKDSGSTVPPSLESRVENKELIPMQQILEEAEPQGQLQEAFQGKRPLFSKCGSTHEDRVEKQSGDPLPLKLENSPEAEGLNSISDVNKNGSIEGEDSKNNELQNSARCSNLVLCQHIPKAERPTDSEEHGNKCKQSFHMVTWHVLKPHKSDSGDSFHHSSLFETQRQLHEERPYKCGNCGKSFKQRSDLFRHQRIHTGEKPYGCQECGKSFSQSAALTKHQRTHTGEKPYTCLKCGERFRQNSHLNRHQSTHSRDKHFKCEECGETCHISNLFRHQRLHKGERPYKCEECEKSFKQRSDLFKHHRIHTGEKPYGCSVCGKRFNQSATLIKHQRIHTGEKPYKCLECGERFRQSTHLIRHQRIHQNKVLSAGRGGSRL
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 scan 64..146
2 KRAB 155..230
3 C2h2 358..380
4 C2h2 386..408
5 C2h2 414..436
6 C2h2 442..463
7 C2h2 469..491
8 C2h2 497..519
9 C2h2 525..547
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 3830 **** 99.0 Highly correlated
2 AluSx1 3447 **** 74.0 Weakly correlated
3 AluSx 3318 **** 74.0 Weakly correlated
4 AluJb 3141 **** 74.0 Weakly correlated
5 AluY 2837 **** 74.0 Weakly correlated
6 L2a 2723 **** 99.0 Highly correlated
7 AluSz 2599 **** 74.0 Weakly correlated
8 MIR 2537 **** 99.0 Highly correlated
9 L2c 2039 **** 99.0 Highly correlated
10 MIRc 1837 **** 99.0 Highly correlated
11 AluJr 1788 **** 74.0 Weakly correlated
12 MIR3 1750 **** 99.0 Highly correlated
13 AluJo 1746 **** 74.0 Weakly correlated
14 L2b 1696 **** 99.0 Highly correlated
15 AluSq2 1672 **** 74.0 Weakly correlated
16 AluSp 1426 **** 74.0 Weakly correlated
17 AluSz6 1113 **** 74.0 Weakly correlated
18 AluSg 1065 **** 74.0 Weakly correlated
19 L2 912 **** 99.0 Highly correlated
20 AluSx3 900 **** 74.0 Weakly correlated
21 AluSc 832 **** 74.0 Weakly correlated
22 L3 549 **** 99.0 Highly correlated
23 AluSc8 538 **** 74.0 Weakly correlated
24 AluSq 534 **** 74.0 Weakly correlated
25 L1M5 434 n.s 99.0 Highly correlated
26 L1MC4 346 **** 99.0 Highly correlated
27 FLAM_C 332 **** 74.0 Weakly correlated
28 L1ME4a 322 **** 99.0 Highly correlated
29 MLT1C 307 **** 94.0 Weakly correlated
30 AluJr4 300 **** 74.0 Weakly correlated
31 MIR1_Amn 299 **** 319.0 Weakly correlated
32 AluSx4 292 **** 74.0 Weakly correlated
33 L1MB7 289 n.s 99.0 Highly correlated
34 L1ME1 269 n.s 99.0 Highly correlated
35 FLAM_A 250 **** 74.0 Weakly correlated
36 AluSg7 236 **** 74.0 Weakly correlated
37 AluSg4 227 **** 74.0 Weakly correlated
38 MLT1K 220 **** 99.0 Highly correlated
39 L1M4 210 n.s 99.0 Highly correlated
40 L1MC5a 205 **** 99.0 Highly correlated
41 L1MB3 203 n.s 99.0 Highly correlated
42 HAL1 198 n.s 99.0 Highly correlated
43 AluSc5 194 **** 74.0 Weakly correlated
44 MLT1D 193 n.s 99.0 Highly correlated
45 MLT1B 190 *** 99.0 Highly correlated
46 L1MEd 180 n.s 99.0 Highly correlated
47 FRAM 179 **** 74.0 Weakly correlated
48 L1MB8 179 n.s 99.0 Highly correlated
49 L1PA2 179 n.s 15.2 Weakly correlated
50 L1ME4b 178 n.s 99.0 Highly correlated
51 L1MEc 178 n.s 99.0 Highly correlated
52 L1ME3G 172 **** 99.0 Highly correlated
53 L3b 170 **** 99.0 Highly correlated
54 MLT1J 164 **** 99.0 Highly correlated
55 L1PA3 163 n.s 19.6 Weakly correlated
56 MamRTE1 156 **** 99.0 Highly correlated
57 L1MEg 155 n.s 99.0 Highly correlated
58 MLT1H 153 **** 99.0 Highly correlated
59 L1MC5 144 n.s 99.0 Highly correlated
60 L1PB1 144 n.s 74.0 Weakly correlated
61 L1ME2 137 n.s 99.0 Highly correlated
62 L1MC3 136 n.s 99.0 Highly correlated
63 L1MA9 134 n.s 99.0 Highly correlated
64 L1MB5 131 n.s 99.0 Highly correlated
65 L1ME3A 130 n.s 99.0 Highly correlated
66 LTR8 129 **** 43.0 Weakly correlated
67 MLT1A0 127 n.s 99.0 Highly correlated
68 AluYm1 116 **** 19.6 Weakly correlated
69 AluYc 112 **** 74.0 Weakly correlated
70 MLT1I 111 **** 99.0 Highly correlated
71 MLT1L 111 **** 99.0 Highly correlated
72 AluYj4 107 **** 0.0 Weakly correlated
73 L1ME4c 107 **** 99.0 Highly correlated
74 L1PA16 106 n.s 74.0 Weakly correlated
75 AmnSINE1 104 **** 319.0 Weakly correlated
76 LTR13 104 **** 19.6 Weakly correlated
77 L1MC1 101 n.s 99.0 Highly correlated
78 L1MC4a 100 n.s 99.0 Highly correlated
79 Alu 99 **** 74.0 Weakly correlated
80 L1MD2 98 n.s 99.0 Highly correlated
81 LTR33 98 *** 99.0 Highly correlated
82 L1MB4 97 n.s 99.0 Highly correlated
83 L1PA5 97 n.s 19.6 Weakly correlated
84 L1MB2 96 n.s 99.0 Highly correlated
85 L1ME3 96 n.s 99.0 Highly correlated
86 L1ME3Cz 93 n.s 99.0 Highly correlated
87 L1MEf 93 n.s 99.0 Highly correlated
88 AluYh3 88 **** 15.2 Weakly correlated
89 L4_A_Mam 86 **** 99.0 Highly correlated
90 L1ME3B 85 n.s 99.0 Highly correlated
91 L1MD 84 n.s 99.0 Highly correlated
92 L1MA4 83 n.s 87.0 Weakly correlated
93 L1ME2z 80 n.s 99.0 Highly correlated
94 ERVL-E-int 78 n.s 99.0 Highly correlated
95 L1MC 78 n.s 99.0 Highly correlated
96 SVA_D 76 ** 15.2 Weakly correlated
97 LTR41 74 **** 99.0 Highly correlated
98 L1MA3 73 n.s 74.0 Weakly correlated
99 MamSINE1 73 **** 99.0 Highly correlated
100 L1MA8 72 n.s 87.0 Weakly correlated
101 MSTB1 72 *** 74.0 Weakly correlated
102 MLT1A 71 n.s 99.0 Highly correlated
103 L1PA4 70 n.s 19.6 Weakly correlated
104 L1M1 69 n.s 74.0 Weakly correlated
105 MLT1N2 69 **** 99.0 Highly correlated
106 L1M3 68 n.s 99.0 Highly correlated
107 MLT1J2 67 *** 99.0 Highly correlated
108 MLT1F 66 *** 99.0 Highly correlated
109 L1PA13 65 n.s 74.0 Weakly correlated
110 MER21C 64 n.s 99.0 Highly correlated
111 MSTA 64 n.s 43.0 Weakly correlated
112 Plat_L3 63 **** 99.0 Highly correlated
113 L1MEi 62 * 99.0 Highly correlated
114 ERV3-16A3_I-int 61 n.s 99.0 Highly correlated
115 HAL1ME 61 n.s 99.0 Highly correlated
116 LTR8B 61 **** 43.0 Weakly correlated
117 HERVK-int 59 **** 28.9 Weakly correlated
118 MLT1F2 59 n.s 99.0 Highly correlated
119 L1M2 58 n.s 99.0 Highly correlated
120 L1MA7 58 n.s 87.0 Weakly correlated
121 L4_C_Mam 58 **** 99.0 Highly correlated
122 LFSINE_Vert 58 **** 319.0 Weakly correlated
123 MLT1H2 58 **** 99.0 Highly correlated
124 THE1B 58 n.s 43.0 Weakly correlated
125 L1ME3F 57 n.s 99.0 Highly correlated
126 MLT1F1 57 **** 99.0 Highly correlated
127 L1MA6 56 n.s 87.0 Weakly correlated
128 L1MD1 56 n.s 99.0 Highly correlated
129 L1PA7 56 n.s 74.0 Weakly correlated
130 MLT1J1 56 **** 99.0 Highly correlated
131 MSTD 56 n.s 74.0 Weakly correlated
132 L1MCa 55 n.s 99.0 Highly correlated
133 LTR41C 55 **** 99.0 Highly correlated
134 AluSq10 54 **** 74.0 Weakly correlated
135 L1MD3 54 n.s 99.0 Highly correlated
136 LTR16C 54 n.s 99.0 Highly correlated
137 LTR50 54 **** 99.0 Highly correlated
138 AluYf1 53 **** 19.6 Weakly correlated
139 L1MDa 53 n.s 99.0 Highly correlated
140 FAM 52 **** 87.0 Weakly correlated
141 L1MA2 52 n.s 74.0 Weakly correlated
142 L1MC2 52 n.s 99.0 Highly correlated
143 L1M4b 51 n.s 99.0 Highly correlated
144 LTR78 51 * 99.0 Highly correlated
145 AluSq4 50 **** 74.0 Weakly correlated
146 HUERS-P3-int 50 **** 43.0 Weakly correlated
147 MLT1O 50 **** 99.0 Highly correlated
148 L1PA6 49 n.s 28.9 Weakly correlated
149 LTR10A 49 **** 28.9 Weakly correlated
150 LTR16A 49 * 99.0 Highly correlated
151 L1PA15 48 n.s 74.0 Weakly correlated
152 L1PA10 47 n.s 74.0 Weakly correlated
153 MLT1E2 46 n.s 99.0 Highly correlated
154 AluYa5 45 * 15.2 Weakly correlated
155 HAL1b 45 n.s 99.0 Highly correlated
156 L1MA5 45 n.s 87.0 Weakly correlated
157 L4_B_Mam 44 **** 99.0 Highly correlated
158 THE1D 44 n.s 43.0 Weakly correlated
159 MLT2B4 43 n.s 99.0 Highly correlated
160 MamRep605 42 *** 99.0 Highly correlated
161 L1PB4 41 n.s 99.0 Highly correlated
162 MLT1G1 41 n.s 99.0 Highly correlated
163 L1PA8 40 n.s 74.0 Weakly correlated
164 LTR67B 40 **** 99.0 Highly correlated
165 MLT1G 40 ** 99.0 Highly correlated
166 L1PA17 38 n.s 74.0 Weakly correlated
167 LTR16A1 38 *** 99.0 Highly correlated
168 L1MA4A 36 n.s 87.0 Weakly correlated
169 LTR33A_ 36 **** 99.0 Highly correlated
170 MLT1E1A 36 n.s 99.0 Highly correlated
171 MLT2D 36 n.s 99.0 Highly correlated
172 L1M4c 35 n.s 99.0 Highly correlated
173 AluYe5 34 **** 74.0 Weakly correlated
174 ERVL-B4-int 34 n.s 99.0 Highly correlated
175 LTR41B 34 **** 99.0 Highly correlated
176 MER41A 34 n.s 74.0 Weakly correlated
177 AluYb8 33 * 15.2 Weakly correlated
178 L1PBa 33 n.s 74.0 Weakly correlated
179 LTR12C 33 n.s 19.6 Weakly correlated
180 LTR14B 33 **** 28.9 Weakly correlated
181 MER50 33 n.s 43.0 Weakly correlated
182 MLT1M 33 **** 99.0 Highly correlated
183 MamGypLTR3 33 **** 99.0 Highly correlated
184 MER41B 32 n.s 74.0 Weakly correlated
185 MER57E3 32 **** 74.0 Weakly correlated
186 MLT2F 32 ** 99.0 Highly correlated
187 L1M6 31 n.s 99.0 Highly correlated
188 L1MB1 31 n.s 99.0 Highly correlated
189 L1ME3E 31 n.s 99.0 Highly correlated
190 L1PA11 31 n.s 74.0 Weakly correlated
191 LTR9 31 **** 43.0 Weakly correlated
192 MER39 31 n.s 74.0 Weakly correlated
193 MLT1G3 31 n.s 99.0 Highly correlated
194 L1ME5 30 n.s 99.0 Highly correlated
195 LTR16 30 n.s 99.0 Highly correlated
196 MER66B 30 **** 43.0 Weakly correlated
197 MLT1A1 30 n.s 87.0 Weakly correlated
198 THE1C 30 n.s 43.0 Weakly correlated
199 L1ME3D 29 n.s 99.0 Highly correlated
200 L1PB3 29 n.s 74.0 Weakly correlated
201 L2-3_Crp 29 **** 431.0 Weakly correlated
202 MSTB 29 n.s 43.0 Weakly correlated
203 SVA_E 29 **** 0.0 Weakly correlated
204 L1P4 28 n.s 74.0 Weakly correlated
205 L1M7 27 n.s 99.0 Highly correlated
206 LTR33A 27 ** 99.0 Highly correlated
207 LTR88b 27 **** 99.0 Highly correlated
208 MER67C 27 ** 99.0 Highly correlated
209 MamGypsy2-I 27 * 99.0 Highly correlated
210 HERVL18-int 26 **** 43.0 Weakly correlated
211 LTR18A 26 **** 43.0 Weakly correlated
212 LTR79 26 n.s 99.0 Highly correlated
213 LTR85a 26 **** 99.0 Highly correlated
214 MER65A 26 *** 74.0 Weakly correlated
215 L1HS 25 n.s 8.6 Weakly correlated
216 L1ME3C 25 n.s 99.0 Highly correlated
217 L1PB2 25 n.s 74.0 Weakly correlated
218 MER4-int 25 n.s 74.0 Weakly correlated
219 MER68 25 * 99.0 Highly correlated
220 MER89 25 *** 99.0 Highly correlated
221 L1M4a1 24 n.s 99.0 Highly correlated
222 L1MA1 24 n.s 74.0 Weakly correlated
223 L1MCc 24 n.s 99.0 Highly correlated
224 L1PREC2 24 n.s 43.0 Weakly correlated
225 LTR13_ 24 **** 28.9 Weakly correlated
226 LTR37A 24 ** 99.0 Highly correlated
227 MLT2B3 24 n.s 99.0 Highly correlated
228 SVA_A 24 ** 19.6 Weakly correlated
229 CR1_Mam 23 **** 99.0 Highly correlated
230 L1MEh 23 n.s 99.0 Highly correlated
231 MLT1E3 23 n.s 99.0 Highly correlated
232 MLT2A2 23 n.s 74.0 Weakly correlated
233 HAL1M8 22 n.s 99.0 Highly correlated
234 L1MA5A 22 n.s 87.0 Weakly correlated
235 L1MEb 22 n.s 99.0 Highly correlated
236 L1P3 22 n.s 74.0 Weakly correlated
237 L1PA15-16 22 n.s 74.0 Weakly correlated
238 LTR55 22 **** 99.0 Highly correlated
239 LTR71B 22 **** 43.0 Weakly correlated
240 MER21B 22 n.s 99.0 Highly correlated
241 MER49 22 n.s 43.0 Weakly correlated
242 MER4A 22 *** 74.0 Weakly correlated
243 HERVIP10FH-int 21 ** 28.9 Weakly correlated
244 HUERS-P3b-int 21 ** 43.0 Weakly correlated
245 LTR8A 21 n.s 43.0 Weakly correlated
246 MER101-int 21 n.s 74.0 Weakly correlated
247 MER4B-int 21 n.s 99.0 Highly correlated
248 MER51A 21 ** 43.0 Weakly correlated
249 MLT1H1 21 n.s 99.0 Highly correlated
250 SVA_F 21 n.s 0.0 Weakly correlated
251 AluYk2 20 **** 19.6 Weakly correlated
252 LTR37-int 20 * 99.0 Highly correlated
253 LTR54 20 *** 74.0 Weakly correlated
254 MER65C 20 **** 74.0 Weakly correlated
255 MER77B 20 n.s 99.0 Highly correlated
256 MLT2C1 20 n.s 99.0 Highly correlated
257 AluYk3 19 ** 19.6 Weakly correlated
258 AmnSINE2 19 **** 319.0 Weakly correlated
259 CR1-3_Croc 19 **** 319.0 Weakly correlated
260 LTR26 19 *** 74.0 Weakly correlated
261 LTR49-int 19 n.s 74.0 Weakly correlated
262 LTR5_Hs 19 n.s 0.0 Weakly correlated
263 MER21A 19 n.s 74.0 Weakly correlated
264 MER77 19 n.s 99.0 Highly correlated
265 MamGypLTR3a 19 *** 99.0 Highly correlated
266 LTR1A2 18 n.s 43.0 Weakly correlated
267 MER4C 18 **** 74.0 Weakly correlated
268 MER74A 18 n.s 99.0 Highly correlated
269 MER76 18 *** 99.0 Highly correlated
270 SVA_C 18 n.s 15.2 Weakly correlated
271 L1M3f 17 n.s 87.0 Weakly correlated
272 L1M4a2 17 n.s 99.0 Highly correlated
273 L1MA10 17 n.s 99.0 Highly correlated
274 LTR10F 17 **** 28.9 Weakly correlated
275 LTR33B 17 * 99.0 Highly correlated
276 LTR65 17 **** 99.0 Highly correlated
277 LTR78B 17 n.s 99.0 Highly correlated
278 LTR88a 17 **** 99.0 Highly correlated
279 MER34A 17 n.s 99.0 Highly correlated
280 MSTB2 17 n.s 74.0 Weakly correlated
281 HERVL40-int 16 n.s 99.0 Highly correlated
282 L1P1 16 n.s 19.6 Weakly correlated
283 L1PA8A 16 n.s 74.0 Weakly correlated
284 LTR10E 16 **** 28.9 Weakly correlated
285 LTR16A2 16 n.s 99.0 Highly correlated
286 LTR82A 16 * 99.0 Highly correlated
287 LTR83 16 **** 99.0 Highly correlated
288 MER21-int 16 n.s 99.0 Highly correlated
289 MER41D 16 **** 74.0 Weakly correlated
290 MER4A1 16 n.s 74.0 Weakly correlated
291 MER4D 16 n.s 74.0 Weakly correlated
292 MER57B2 16 * 43.0 Weakly correlated
293 MLT2B1 16 n.s 99.0 Highly correlated
294 MamGypsy2-LTR 16 **** 99.0 Highly correlated
295 MamRep1151 16 * 99.0 Highly correlated
296 X7A_LINE 16 **** 319.0 Weakly correlated
297 L1MDb 15 n.s 99.0 Highly correlated
298 L1MEj 15 n.s 99.0 Highly correlated
299 L1PA14 15 n.s 74.0 Weakly correlated
300 LTR10C 15 ** 28.9 Weakly correlated
301 LTR23 15 *** 74.0 Weakly correlated
302 LTR88c 15 **** 99.0 Highly correlated
303 MSTC 15 n.s 74.0 Weakly correlated
304 Penelope1_Vert 15 **** 319.0 Weakly correlated
305 SVA_B 15 n.s 15.2 Weakly correlated
306 X6A_LINE 15 **** 99.0 Highly correlated
307 HERVK22-int 14 n.s 43.0 Weakly correlated
308 L1PB 14 n.s 74.0 Weakly correlated
309 L2-1_AMi 14 *** 319.0 Weakly correlated
310 LTR16E2 14 n.s 99.0 Highly correlated
311 LTR7 14 n.s 19.6 Weakly correlated
312 MER4B 14 n.s 74.0 Weakly correlated
313 MER57-int 14 n.s 87.0 Weakly correlated
314 MER61C 14 **** 43.0 Weakly correlated
315 MER65-int 14 n.s 87.0 Weakly correlated
316 MER66C 14 *** 43.0 Weakly correlated
317 L1M3e 13 n.s 99.0 Highly correlated
318 L1MCb 13 n.s 99.0 Highly correlated
319 L1P4a 13 n.s 74.0 Weakly correlated
320 LTR16E1 13 n.s 99.0 Highly correlated
321 LTR40b 13 n.s 99.0 Highly correlated
322 MER11A 13 n.s 28.9 Weakly correlated
323 MER31B 13 n.s 99.0 Highly correlated
324 MER34C2 13 *** 74.0 Weakly correlated
325 MER4D1 13 n.s 74.0 Weakly correlated
326 MER51E 13 **** 43.0 Weakly correlated
327 MER67B 13 *** 99.0 Highly correlated
328 MER72 13 n.s 43.0 Weakly correlated
329 MER90a 13 n.s 99.0 Highly correlated
330 MLT2B2 13 n.s 99.0 Highly correlated
331 MamGypLTR1c 13 ** 99.0 Highly correlated
332 PRIMA4-int 13 * 74.0 Weakly correlated
333 X6B_LINE 13 **** 99.0 Highly correlated
334 AluYg6 12 ** 15.2 Weakly correlated
335 AluYk11 12 **** 15.2 Weakly correlated
336 HERVL-int 12 n.s 74.0 Weakly correlated
337 L1P2 12 n.s 28.9 Weakly correlated
338 L5 12 *** 99.0 Highly correlated
339 LTR104_Mam 12 n.s 99.0 Highly correlated
340 LTR16B2 12 n.s 99.0 Highly correlated
341 LTR37B 12 n.s 99.0 Highly correlated
342 LTR48 12 n.s 74.0 Weakly correlated
343 LTR75 12 **** 99.0 Highly correlated
344 LTR76 12 **** 74.0 Weakly correlated
345 LTR7B 12 n.s 28.9 Weakly correlated
346 MER34D 12 **** 74.0 Weakly correlated
347 MER39B 12 n.s 74.0 Weakly correlated
348 MER61-int 12 n.s 43.0 Weakly correlated
349 MER61A 12 * 43.0 Weakly correlated
350 MER74B 12 n.s 99.0 Highly correlated
351 MLT2C2 12 n.s 99.0 Highly correlated
352 AluYi6 11 **** 15.2 Weakly correlated
353 ERV24B_Prim-int 11 * 74.0 Weakly correlated
354 HERVH-int 11 n.s 28.9 Weakly correlated
355 L1M6B 11 *** 99.0 Highly correlated
356 L1M8 11 n.s 99.0 Highly correlated
357 L1PA12 11 n.s 74.0 Weakly correlated
358 LTR25 11 ** 43.0 Weakly correlated
359 LTR36 11 * 74.0 Weakly correlated
360 LTR39 11 n.s 43.0 Weakly correlated
361 LTR40c 11 * 99.0 Highly correlated
362 LTR54B 11 n.s 74.0 Weakly correlated
363 LTR56 11 n.s 74.0 Weakly correlated
364 MER41-int 11 n.s 74.0 Weakly correlated
365 MER41C 11 n.s 74.0 Weakly correlated
366 MER41G 11 **** 74.0 Weakly correlated
367 MER54B 11 ** 87.0 Weakly correlated
368 MER83 11 ** 43.0 Weakly correlated
369 MSTA-int 11 n.s 43.0 Weakly correlated
370 PABL_B 11 ** 43.0 Weakly correlated
371 AluYc3 10 ** 74.0 Weakly correlated
372 AluYk4 10 n.s 15.2 Weakly correlated
373 HERV15-int 10 * 28.9 Weakly correlated
374 LOR1-int 10 n.s 74.0 Weakly correlated
375 LTR101_Mam 10 n.s 99.0 Highly correlated
376 LTR12E 10 ** 19.6 Weakly correlated
377 LTR12F 10 n.s 28.9 Weakly correlated
378 LTR15 10 ** 28.9 Weakly correlated
379 LTR40a 10 n.s 99.0 Highly correlated
380 LTR45B 10 ** 74.0 Weakly correlated
381 LTR52 10 n.s 99.0 Highly correlated
382 LTR81A 10 * 99.0 Highly correlated
383 LTR82B 10 n.s 99.0 Highly correlated
384 LTR85b 10 n.s 99.0 Highly correlated
385 MER31A 10 n.s 87.0 Weakly correlated
386 MER34 10 n.s 87.0 Weakly correlated
387 MER34A1 10 n.s 99.0 Highly correlated
388 MER4CL34 10 n.s 43.0 Weakly correlated
389 MER51-int 10 n.s 43.0 Weakly correlated
390 MER67A 10 ** 99.0 Highly correlated
391 MER90 10 n.s 99.0 Highly correlated
392 MLT1H-int 10 n.s 99.0 Highly correlated
393 Mam_R4 10 *** 99.0 Highly correlated
394 AluYa8 9 **** 15.2 Weakly correlated
395 CR1-16_AMi 9 **** 319.0 Weakly correlated
396 ERV24_Prim-int 9 n.s 74.0 Weakly correlated
397 ERV3-16A3_LTR 9 n.s 99.0 Highly correlated
398 HERVI-int 9 * 28.9 Weakly correlated
399 HERVK3-int 9 n.s 28.9 Weakly correlated
400 HERVP71A-int 9 n.s 43.0 Weakly correlated
401 HERVS71-int 9 n.s 28.9 Weakly correlated
402 L1MEg2 9 n.s 99.0 Highly correlated
403 LTR106_Mam 9 * 99.0 Highly correlated
404 LTR16D 9 n.s 99.0 Highly correlated
405 LTR24B 9 ** 74.0 Weakly correlated
406 LTR47A 9 n.s 74.0 Weakly correlated
407 LTR49 9 n.s 74.0 Weakly correlated
408 LTR64 9 ** 74.0 Weakly correlated
409 LTR85c 9 n.s 99.0 Highly correlated
410 LTR91 9 **** 99.0 Highly correlated
411 LTR9B 9 n.s 43.0 Weakly correlated
412 MER52A 9 n.s 74.0 Weakly correlated
413 MER54A 9 n.s 87.0 Weakly correlated
414 MER57B1 9 n.s 43.0 Weakly correlated
415 MER61B 9 * 43.0 Weakly correlated
416 MER67D 9 n.s 99.0 Highly correlated
417 MamGypLTR2c 9 n.s 99.0 Highly correlated
418 PrimLTR79 9 **** 74.0 Weakly correlated
419 HERV16-int 8 n.s 99.0 Highly correlated
420 HERV17-int 8 n.s 28.9 Weakly correlated
421 HERV4_I-int 8 n.s 43.0 Weakly correlated
422 HERVFH21-int 8 * 28.9 Weakly correlated
423 HERVH48-int 8 n.s 28.9 Weakly correlated
424 L1M3c 8 n.s 99.0 Highly correlated
425 L1PBa1 8 n.s 74.0 Weakly correlated
426 LTR13A 8 n.s 28.9 Weakly correlated
427 LTR16B1 8 n.s 99.0 Highly correlated
428 LTR18B 8 * 43.0 Weakly correlated
429 LTR19A 8 n.s 43.0 Weakly correlated
430 LTR1D1 8 n.s 43.0 Weakly correlated
431 LTR2 8 n.s 28.9 Weakly correlated
432 LTR24 8 ** 74.0 Weakly correlated
433 LTR33C 8 n.s 99.0 Highly correlated
434 LTR44 8 ** 74.0 Weakly correlated
435 LTR61 8 *** 43.0 Weakly correlated
436 LTR62 8 * 74.0 Weakly correlated
437 LTR72 8 **** 74.0 Weakly correlated
438 LTR84b 8 n.s 99.0 Highly correlated
439 LTR89 8 n.s 99.0 Highly correlated
440 MER52D 8 n.s 74.0 Weakly correlated
441 MER68B 8 * 99.0 Highly correlated
442 MER92-int 8 n.s 99.0 Highly correlated
443 MamGypLTR1a 8 n.s 99.0 Highly correlated
444 HERV35I-int 7 n.s 43.0 Weakly correlated
445 HERVL74-int 7 n.s 99.0 Highly correlated
446 L1M 7 ** 74.0 Weakly correlated
447 L1M2c 7 n.s 87.0 Weakly correlated
448 LTR10D 7 ** 28.9 Weakly correlated
449 LTR19C 7 *** 43.0 Weakly correlated
450 LTR21A 7 **** 28.9 Weakly correlated
451 LTR22B 7 ** 28.9 Weakly correlated
452 LTR4 7 *** 28.9 Weakly correlated
453 LTR43 7 n.s 74.0 Weakly correlated
454 LTR46 7 ** 43.0 Weakly correlated
455 LTR51 7 n.s 74.0 Weakly correlated
456 LTR5A 7 n.s 19.6 Weakly correlated
457 LTR60B 7 * 74.0 Weakly correlated
458 LTR6A 7 n.s 28.9 Weakly correlated
459 LTR90A 7 *** 99.0 Highly correlated
460 LTR9D 7 n.s 43.0 Weakly correlated
461 MER101 7 * 74.0 Weakly correlated
462 MER31-int 7 n.s 99.0 Highly correlated
463 MER51B 7 n.s 43.0 Weakly correlated
464 MER92B 7 n.s 99.0 Highly correlated
465 MLT1F1-int 7 ** 99.0 Highly correlated
466 MamGypLTR1b 7 n.s 99.0 Highly correlated
467 THE1A 7 n.s 43.0 Weakly correlated
468 X7B_LINE 7 * 319.0 Weakly correlated
469 AluYh3a3 6 ** 15.2 Weakly correlated
470 CR1-L3A_Croc 6 *** 319.0 Weakly correlated
471 ERVL-int 6 n.s 99.0 Highly correlated
472 ERVL47-int 6 n.s 74.0 Weakly correlated
473 HERV9NC-int 6 n.s 19.6 Weakly correlated
474 HERVE-int 6 n.s 19.6 Weakly correlated
475 HERVIP10B3-int 6 n.s 28.9 Weakly correlated
476 L1MEa 6 n.s 99.0 Highly correlated
477 L1PBb 6 n.s 74.0 Weakly correlated
478 LOR1b 6 n.s 74.0 Weakly correlated
479 LTR103_Mam 6 n.s 99.0 Highly correlated
480 LTR103b_Mam 6 * 99.0 Highly correlated
481 LTR10B 6 **** 28.9 Weakly correlated
482 LTR16B 6 n.s 99.0 Highly correlated
483 LTR25-int 6 n.s 43.0 Weakly correlated
484 LTR26E 6 *** 74.0 Weakly correlated
485 LTR29 6 n.s 43.0 Weakly correlated
486 LTR2C 6 * 19.6 Weakly correlated
487 LTR35A 6 **** 43.0 Weakly correlated
488 LTR3B_ 6 * 28.9 Weakly correlated
489 LTR53 6 n.s 99.0 Highly correlated
490 LTR53-int 6 n.s 99.0 Highly correlated
491 LTR81B 6 n.s 99.0 Highly correlated
492 LTR84a 6 n.s 99.0 Highly correlated
493 MER110A 6 n.s 99.0 Highly correlated
494 MER34B-int 6 n.s 99.0 Highly correlated
495 MER52C 6 n.s 74.0 Weakly correlated
496 MER57A-int 6 n.s 43.0 Weakly correlated
497 MER57F 6 n.s 74.0 Weakly correlated
498 MER61D 6 * 43.0 Weakly correlated
499 MER66-int 6 n.s 43.0 Weakly correlated
500 MLT1C-int 6 n.s 94.0 Weakly correlated
501 MamGypLTR1d 6 n.s 99.0 Highly correlated
502 MamRep1527 6 n.s 99.0 Highly correlated
503 THE1B-int 6 n.s 43.0 Weakly correlated
504 X2_LINE 6 *** 319.0 Weakly correlated
505 X7C_LINE 6 ** 319.0 Weakly correlated
506 HERVIP10F-int 5 n.s 28.9 Weakly correlated
507 HERVK14-int 5 n.s 28.9 Weakly correlated
508 L1M2a 5 n.s 87.0 Weakly correlated
509 L1MEg1 5 n.s 99.0 Highly correlated
510 LOR1a 5 n.s 74.0 Weakly correlated
511 LTR10B2 5 *** 28.9 Weakly correlated
512 LTR14 5 ** 28.9 Weakly correlated
513 LTR3B 5 *** 28.9 Weakly correlated
514 LTR45C 5 n.s 99.0 Highly correlated
515 LTR47B4 5 *** 74.0 Weakly correlated
516 LTR57 5 n.s 74.0 Weakly correlated
517 LTR71A 5 * 43.0 Weakly correlated
518 MER110 5 n.s 99.0 Highly correlated
519 MER11B 5 n.s 19.6 Weakly correlated
520 MER11C 5 n.s 19.6 Weakly correlated
521 MER34-int 5 n.s 99.0 Highly correlated
522 MER34B 5 n.s 87.0 Weakly correlated
523 MER4E 5 n.s 74.0 Weakly correlated
524 MER4E1 5 n.s 74.0 Weakly correlated
525 MER50-int 5 n.s 43.0 Weakly correlated
526 MER50B 5 n.s 43.0 Weakly correlated
527 MER51C 5 * 43.0 Weakly correlated
528 MER51D 5 ** 43.0 Weakly correlated
529 MER52-int 5 n.s 99.0 Highly correlated
530 MER57C2 5 n.s 87.0 Weakly correlated
531 MER57E1 5 n.s 87.0 Weakly correlated
532 MER66A 5 n.s 43.0 Weakly correlated
533 MER66D 5 * 43.0 Weakly correlated
534 MER84 5 n.s 43.0 Weakly correlated
535 MLT1D-int 5 n.s 99.0 Highly correlated
536 MLT1J-int 5 n.s 99.0 Highly correlated
537 MamGyp-int 5 n.s 99.0 Highly correlated
538 MamGypLTR2b 5 n.s 99.0 Highly correlated
539 THE1D-int 5 n.s 28.9 Weakly correlated
540 AluYb9 4 n.s 15.2 Weakly correlated
541 AluYk12 4 ** 15.2 Weakly correlated
542 CR1-13_AMi 4 *** 319.0 Weakly correlated
543 HERV3-int 4 n.s 28.9 Weakly correlated
544 HERV9N-int 4 n.s 19.6 Weakly correlated
545 HERVKC4-int 4 n.s 28.9 Weakly correlated
546 L1M3b 4 n.s 99.0 Highly correlated
547 L1M3d 4 n.s 99.0 Highly correlated
548 LTR06 4 ** 74.0 Weakly correlated
549 LTR105_Mam 4 n.s 99.0 Highly correlated
550 LTR16D2 4 n.s 99.0 Highly correlated
551 LTR22A 4 n.s 43.0 Weakly correlated
552 LTR22B2 4 **** 28.9 Weakly correlated
553 LTR26C 4 n.s 0.0 Weakly correlated
554 LTR26D 4 n.s 0.0 Weakly correlated
555 LTR2752 4 n.s 43.0 Weakly correlated
556 LTR27C 4 n.s 43.0 Weakly correlated
557 LTR27E 4 n.s 43.0 Weakly correlated
558 LTR32 4 n.s 43.0 Weakly correlated
559 LTR38B 4 n.s 74.0 Weakly correlated
560 LTR47A2 4 n.s 74.0 Weakly correlated
561 LTR48B 4 n.s 74.0 Weakly correlated
562 LTR73 4 n.s 99.0 Highly correlated
563 LTR75B 4 * 99.0 Highly correlated
564 LTR81 4 n.s 99.0 Highly correlated
565 LTR81AB 4 * 99.0 Highly correlated
566 LTR86A2 4 n.s 99.0 Highly correlated
567 MER110-int 4 n.s 99.0 Highly correlated
568 MER4D0 4 n.s 74.0 Weakly correlated
569 MER50C 4 ** 43.0 Weakly correlated
570 MER57A1 4 n.s 43.0 Weakly correlated
571 MER57D 4 n.s 87.0 Weakly correlated
572 MER65D 4 n.s 87.0 Weakly correlated
573 MER74C 4 n.s 99.0 Highly correlated
574 MER84-int 4 n.s 74.0 Weakly correlated
575 MLT1E 4 n.s 99.0 Highly correlated
576 MLT1G-int 4 n.s 99.0 Highly correlated
577 MLT2E 4 n.s 99.0 Highly correlated
578 MSTA1 4 n.s 74.0 Weakly correlated
579 PRIMA41-int 4 n.s 74.0 Weakly correlated
580 THE1A-int 4 n.s 43.0 Weakly correlated
581 X9_LINE 4 * 319.0 Weakly correlated
582 CR1-12_AMi 3 ** 319.0 Weakly correlated
583 HERVK11D-int 3 n.s 19.6 Weakly correlated
584 HERVK13-int 3 n.s 19.6 Weakly correlated
585 HUERS-P1-int 3 n.s 43.0 Weakly correlated
586 LTR102_Mam 3 n.s 99.0 Highly correlated
587 LTR108e_Mam 3 n.s 99.0 Highly correlated
588 LTR10B1 3 n.s 28.9 Weakly correlated
589 LTR12D 3 n.s 19.6 Weakly correlated
590 LTR14C 3 n.s 28.9 Weakly correlated
591 LTR16D1 3 n.s 99.0 Highly correlated
592 LTR17 3 n.s 28.9 Weakly correlated
593 LTR19B 3 n.s 43.0 Weakly correlated
594 LTR1D 3 n.s 43.0 Weakly correlated
595 LTR1E 3 n.s 43.0 Weakly correlated
596 LTR22B1 3 n.s 28.9 Weakly correlated
597 LTR22C0 3 n.s 28.9 Weakly correlated
598 LTR23-int 3 n.s 74.0 Weakly correlated
599 LTR35 3 * 43.0 Weakly correlated
600 LTR3A 3 n.s 28.9 Weakly correlated
601 LTR43-int 3 n.s 74.0 Weakly correlated
602 LTR5 3 **** 19.6 Weakly correlated
603 LTR5B 3 n.s 28.9 Weakly correlated
604 LTR7C 3 n.s 28.9 Weakly correlated
605 LTR80B 3 n.s 99.0 Highly correlated
606 LTR87 3 n.s 99.0 Highly correlated
607 MER11D 3 n.s 19.6 Weakly correlated
608 MER34C_ 3 n.s 87.0 Weakly correlated
609 MER41E 3 n.s 74.0 Weakly correlated
610 MER4A1_ 3 n.s 74.0 Weakly correlated
611 MER70A 3 n.s 87.0 Weakly correlated
612 MER72B 3 n.s 43.0 Weakly correlated
613 MER87B 3 n.s 74.0 Weakly correlated
614 MER92C 3 * 99.0 Highly correlated
615 MER9a1 3 n.s 19.6 Weakly correlated
616 MLT1A-int 3 n.s 99.0 Highly correlated
617 MLT1E1 3 n.s 99.0 Highly correlated
618 MLT1I-int 3 n.s 99.0 Highly correlated
619 MLT1J2-int 3 n.s 99.0 Highly correlated
620 MLT2A1 3 n.s 74.0 Weakly correlated
621 MSTB-int 3 n.s 43.0 Weakly correlated
622 MSTD-int 3 n.s 74.0 Weakly correlated
623 PABL_A-int 3 n.s 74.0 Weakly correlated
624 PABL_B-int 3 n.s 74.0 Weakly correlated
625 UCON86 3 *** 319.0 Weakly correlated
626 AluYh9 2 ** 15.2 Weakly correlated
627 HERV30-int 2 n.s 28.9 Weakly correlated
628 HERVK11-int 2 n.s 28.9 Weakly correlated
629 HERVK9-int 2 n.s 28.9 Weakly correlated
630 L1M3de 2 n.s 99.0 Highly correlated
631 LTR107_Mam 2 n.s 99.0 Highly correlated
632 LTR12 2 n.s 28.9 Weakly correlated
633 LTR12_ 2 n.s 28.9 Weakly correlated
634 LTR14A 2 n.s 28.9 Weakly correlated
635 LTR1A1 2 n.s 43.0 Weakly correlated
636 LTR1C1 2 n.s 43.0 Weakly correlated
637 LTR24C 2 n.s 74.0 Weakly correlated
638 LTR26B 2 n.s 74.0 Weakly correlated
639 LTR27 2 n.s 43.0 Weakly correlated
640 LTR2B 2 n.s 19.6 Weakly correlated
641 LTR34 2 n.s 74.0 Weakly correlated
642 LTR40A1 2 n.s 99.0 Highly correlated
643 LTR42 2 n.s 74.0 Weakly correlated
644 LTR43B 2 n.s 74.0 Weakly correlated
645 LTR45 2 n.s 99.0 Highly correlated
646 LTR47B 2 ** 74.0 Weakly correlated
647 LTR60 2 ** 43.0 Weakly correlated
648 LTR68 2 n.s 99.0 Highly correlated
649 LTR6B 2 n.s 19.6 Weakly correlated
650 LTR72B 2 n.s 74.0 Weakly correlated
651 LTR75_1 2 n.s 99.0 Highly correlated
652 LTR80A 2 n.s 99.0 Highly correlated
653 LTR81C 2 n.s 99.0 Highly correlated
654 LTR86B1 2 n.s 99.0 Highly correlated
655 LTR86B2 2 n.s 99.0 Highly correlated
656 LTR86C 2 n.s 99.0 Highly correlated
657 MER129 2 * 319.0 Weakly correlated
658 MER61F 2 n.s 43.0 Weakly correlated
659 MER65B 2 n.s 74.0 Weakly correlated
660 MER68-int 2 n.s 99.0 Highly correlated
661 MER70B 2 n.s 87.0 Weakly correlated
662 MER70C 2 n.s 99.0 Highly correlated
663 MER73 2 n.s 87.0 Weakly correlated
664 MER76-int 2 n.s 99.0 Highly correlated
665 MER83B-int 2 n.s 99.0 Highly correlated
666 MER88 2 n.s 99.0 Highly correlated
667 MER92D 2 n.s 99.0 Highly correlated
668 MLT1F-int 2 n.s 99.0 Highly correlated
669 MLT1G3-int 2 n.s 99.0 Highly correlated
670 MLT1J1-int 2 n.s 99.0 Highly correlated
671 PABL_A 2 n.s 43.0 Weakly correlated
672 UCON51 2 *** 319.0 Weakly correlated
673 X8_LINE 2 * 319.0 Weakly correlated
674 AluYd8 1 n.s 15.2 Weakly correlated
675 HERV-Fc2_LTR 1 *** 15.2 Weakly correlated
676 HERV1_LTRd 1 * 43.0 Weakly correlated
677 HERV9-int 1 n.s 28.9 Weakly correlated
678 HERVFH19-int 1 n.s 43.0 Weakly correlated
679 L1P4b 1 n.s 74.0 Weakly correlated
680 L1P4d 1 n.s 74.0 Weakly correlated
681 L2-1_Crp 1 * 319.0 Weakly correlated
682 LTR10G 1 n.s 28.9 Weakly correlated
683 LTR12B 1 n.s 28.9 Weakly correlated
684 LTR18C 1 n.s 43.0 Weakly correlated
685 LTR19-int 1 n.s 43.0 Weakly correlated
686 LTR1B 1 n.s 43.0 Weakly correlated
687 LTR22 1 n.s 28.9 Weakly correlated
688 LTR22E 1 n.s 28.9 Weakly correlated
689 LTR28B 1 n.s 43.0 Weakly correlated
690 LTR3 1 n.s 28.9 Weakly correlated
691 LTR30 1 n.s 28.9 Weakly correlated
692 LTR35B 1 n.s 43.0 Weakly correlated
693 LTR38-int 1 n.s 74.0 Weakly correlated
694 LTR46-int 1 n.s 74.0 Weakly correlated
695 LTR47B2 1 n.s 74.0 Weakly correlated
696 LTR47B3 1 n.s 74.0 Weakly correlated
697 LTR53B 1 n.s 99.0 Highly correlated
698 LTR57-int 1 n.s 74.0 Weakly correlated
699 LTR66 1 n.s 43.0 Weakly correlated
700 LTR86A1 1 n.s 99.0 Highly correlated
701 LTR90B 1 n.s 99.0 Highly correlated
702 LTR9A1 1 n.s 43.0 Weakly correlated
703 MER101B 1 n.s 87.0 Weakly correlated
704 MER57E2 1 n.s 87.0 Weakly correlated
705 MER61E 1 n.s 43.0 Weakly correlated
706 MER70-int 1 n.s 99.0 Highly correlated
707 MER83A-int 1 n.s 99.0 Highly correlated
708 MER92A 1 n.s 99.0 Highly correlated
709 MER9a2 1 n.s 19.6 Weakly correlated
710 MER9a3 1 n.s 28.9 Weakly correlated
711 MLT1-int 1 n.s 99.0 Highly correlated
712 MLT1A0-int 1 n.s 99.0 Highly correlated
713 MLT1A1-int 1 n.s 87.0 Weakly correlated
714 MLT1E1A-int 1 n.s 99.0 Highly correlated
715 MLT1E3-int 1 n.s 99.0 Highly correlated
716 MLT1F2-int 1 n.s 99.0 Highly correlated
717 MLT1H2-int 1 n.s 99.0 Highly correlated
718 MLT1K-int 1 n.s 99.0 Highly correlated
719 MLT2B5 1 n.s 87.0 Weakly correlated
720 MST-int 1 n.s 74.0 Weakly correlated
721 MSTC-int 1 n.s 74.0 Weakly correlated
722 PRIMA4_LTR 1 n.s 74.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluY 529 n.s 74.0 Weakly correlated
2 AluSx1 424 n.s 74.0 Weakly correlated
3 AluSx 385 n.s 74.0 Weakly correlated
4 AluSz 316 n.s 74.0 Weakly correlated
5 AluJb 249 n.s 74.0 Weakly correlated
6 AluSq2 217 n.s 74.0 Weakly correlated
7 AluSp 206 n.s 74.0 Weakly correlated
8 AluSg 151 n.s 74.0 Weakly correlated
9 AluSz6 146 n.s 74.0 Weakly correlated
10 AluSc 122 n.s 74.0 Weakly correlated
11 AluJr 120 n.s 74.0 Weakly correlated
12 AluSx3 104 n.s 74.0 Weakly correlated
13 AluJo 104 n.s 74.0 Weakly correlated
14 AluSc8 78 n.s 74.0 Weakly correlated
15 AluSq 59 n.s 74.0 Weakly correlated
16 AluSx4 46 n.s 74.0 Weakly correlated
17 AluSc5 28 n.s 74.0 Weakly correlated
18 AluSg7 27 n.s 74.0 Weakly correlated
19 AluJr4 22 n.s 74.0 Weakly correlated
20 AluSg4 21 n.s 74.0 Weakly correlated
21 AluYj4 21 n.s 0.0 Weakly correlated
22 AluYm1 19 n.s 19.6 Weakly correlated
23 L2a 16 n.s 99.0 Highly correlated
24 AluYc 15 n.s 74.0 Weakly correlated
25 AluYh3 14 n.s 15.2 Weakly correlated
26 FLAM_A 14 n.s 74.0 Weakly correlated
27 L1PA3 13 n.s 19.6 Weakly correlated
28 L1PA5 13 n.s 19.6 Weakly correlated
29 AluYf1 12 n.s 19.6 Weakly correlated
30 MIRb 11 n.s 99.0 Highly correlated
31 L1MB7 10 n.s 99.0 Highly correlated
32 MIR 10 n.s 99.0 Highly correlated
33 L1PA2 10 n.s 15.2 Weakly correlated
34 L1PB1 9 n.s 74.0 Weakly correlated
35 AluYa5 9 n.s 15.2 Weakly correlated
36 FLAM_C 9 n.s 74.0 Weakly correlated
37 L1ME3G 7 n.s 99.0 Highly correlated
38 L2b 7 n.s 99.0 Highly correlated
39 L1PA16 7 n.s 74.0 Weakly correlated
40 L1PA11 6 n.s 74.0 Weakly correlated
41 AluSq4 6 n.s 74.0 Weakly correlated
42 AluYb8 6 n.s 15.2 Weakly correlated
43 L1MB8 6 n.s 99.0 Highly correlated
44 L2 6 n.s 99.0 Highly correlated
45 L1MEf 6 n.s 99.0 Highly correlated
46 L1M4 6 n.s 99.0 Highly correlated
47 SVA_D 6 n.s 15.2 Weakly correlated
48 SVA_E 5 n.s 0.0 Weakly correlated
49 AluYk3 5 n.s 19.6 Weakly correlated
50 L1MB3 5 n.s 99.0 Highly correlated
51 L1MEd 5 n.s 99.0 Highly correlated
52 L1ME4a 5 n.s 99.0 Highly correlated
53 L1PA7 5 n.s 74.0 Weakly correlated
54 L1MC4 4 n.s 99.0 Highly correlated
55 L1MEg 4 n.s 99.0 Highly correlated
56 L1ME1 4 n.s 99.0 Highly correlated
57 L1MEc 4 n.s 99.0 Highly correlated
58 L1PA10 4 n.s 74.0 Weakly correlated
59 MSTA 4 n.s 43.0 Weakly correlated
60 L1PA4 4 n.s 19.6 Weakly correlated
61 L1ME3Cz 4 n.s 99.0 Highly correlated
62 AluYk2 4 n.s 19.6 Weakly correlated
63 L2c 4 n.s 99.0 Highly correlated
64 Alu 4 n.s 74.0 Weakly correlated
65 L1PB2 3 n.s 74.0 Weakly correlated
66 L1MC 3 n.s 99.0 Highly correlated
67 L1PA8 3 n.s 74.0 Weakly correlated
68 L1PB3 3 n.s 74.0 Weakly correlated
69 MER4A 3 n.s 74.0 Weakly correlated
70 THE1B 3 n.s 43.0 Weakly correlated
71 L1MC5a 3 n.s 99.0 Highly correlated
72 AluYe5 3 n.s 74.0 Weakly correlated
73 FRAM 3 n.s 74.0 Weakly correlated
74 L1M5 3 n.s 99.0 Highly correlated
75 L1ME3A 3 n.s 99.0 Highly correlated
76 L1M2 3 n.s 99.0 Highly correlated
77 L1MA4 3 n.s 87.0 Weakly correlated
78 L1MC5 3 n.s 99.0 Highly correlated
79 AluYk4 3 n.s 15.2 Weakly correlated
80 L1MA1 3 n.s 74.0 Weakly correlated
81 L1ME4b 3 n.s 99.0 Highly correlated
82 L1PA6 3 n.s 28.9 Weakly correlated
83 MLT1K 3 n.s 99.0 Highly correlated
84 AluSq10 2 n.s 74.0 Weakly correlated
85 AluYg6 2 n.s 15.2 Weakly correlated
86 HAL1 2 n.s 99.0 Highly correlated
87 L1MDa 2 n.s 99.0 Highly correlated
88 L1PA15 2 n.s 74.0 Weakly correlated
89 L1MA2 2 n.s 74.0 Weakly correlated
90 L1MB4 2 n.s 99.0 Highly correlated
91 L1MA7 2 n.s 87.0 Weakly correlated
92 L1MC3 2 n.s 99.0 Highly correlated
93 L1MC4a 2 n.s 99.0 Highly correlated
94 L1PA13 2 n.s 74.0 Weakly correlated
95 L1M3f 2 n.s 87.0 Weakly correlated
96 L1PA8A 2 n.s 74.0 Weakly correlated
97 HUERS-P1-int 2 n.s 43.0 Weakly correlated
98 L1M4c 2 n.s 99.0 Highly correlated
99 L1ME3B 2 n.s 99.0 Highly correlated
100 MER34D 2 n.s 74.0 Weakly correlated
101 MER49 2 n.s 43.0 Weakly correlated
102 MSTB 2 n.s 43.0 Weakly correlated
103 AluYa8 2 n.s 15.2 Weakly correlated
104 L1M4b 2 n.s 99.0 Highly correlated
105 L1MC1 2 n.s 99.0 Highly correlated
106 L1ME2 2 n.s 99.0 Highly correlated
107 SVA_F 2 n.s 0.0 Weakly correlated
108 ERVL-B4-int 2 n.s 99.0 Highly correlated
109 L1MA3 2 n.s 74.0 Weakly correlated
110 L1MA4A 2 n.s 87.0 Weakly correlated
111 L1MB1 2 n.s 99.0 Highly correlated
112 L1P3 2 n.s 74.0 Weakly correlated
113 MIR3 2 n.s 99.0 Highly correlated
114 MIRc 2 n.s 99.0 Highly correlated
115 AluYc3 1 n.s 74.0 Weakly correlated
116 L1M3 1 n.s 99.0 Highly correlated
117 L1MA6 1 n.s 87.0 Weakly correlated
118 L1PA14 1 n.s 74.0 Weakly correlated
119 LTR38-int 1 n.s 74.0 Weakly correlated
120 MER4B-int 1 n.s 99.0 Highly correlated
121 MLT1E1 1 n.s 99.0 Highly correlated
122 MLT1F-int 1 n.s 99.0 Highly correlated
123 MLT2C1 1 n.s 99.0 Highly correlated
124 SVA_A 1 n.s 19.6 Weakly correlated
125 HAL1b 1 n.s 99.0 Highly correlated
126 L1MA8 1 n.s 87.0 Weakly correlated
127 L1PB4 1 n.s 99.0 Highly correlated
128 LTR37A 1 n.s 99.0 Highly correlated
129 LTR50 1 n.s 99.0 Highly correlated
130 LTR82B 1 n.s 99.0 Highly correlated
131 MER41C 1 n.s 74.0 Weakly correlated
132 MLT1I 1 n.s 99.0 Highly correlated
133 MSTD-int 1 n.s 74.0 Weakly correlated
134 FAM 1 n.s 87.0 Weakly correlated
135 L1M1 1 n.s 74.0 Weakly correlated
136 L1ME3 1 n.s 99.0 Highly correlated
137 L1P4a 1 n.s 74.0 Weakly correlated
138 MER34 1 n.s 87.0 Weakly correlated
139 MLT2C2 1 n.s 99.0 Highly correlated
140 MSTA-int 1 n.s 43.0 Weakly correlated
141 HAL1M8 1 n.s 99.0 Highly correlated
142 HERV9NC-int 1 n.s 19.6 Weakly correlated
143 L1MCb 1 n.s 99.0 Highly correlated
144 L1MD1 1 n.s 99.0 Highly correlated
145 L1ME3D 1 n.s 99.0 Highly correlated
146 L1PBb 1 n.s 74.0 Weakly correlated
147 MLT1B 1 n.s 99.0 Highly correlated
148 MLT1N2 1 n.s 99.0 Highly correlated
149 MLT2B1 1 n.s 99.0 Highly correlated
150 MSTD 1 n.s 74.0 Weakly correlated
151 MamRep1151 1 n.s 99.0 Highly correlated
152 HERV15-int 1 n.s 28.9 Weakly correlated
153 HERVK22-int 1 n.s 43.0 Weakly correlated
154 L1HS 1 n.s 8.6 Weakly correlated
155 L1MB2 1 n.s 99.0 Highly correlated
156 L1MC2 1 n.s 99.0 Highly correlated
157 L1PB 1 n.s 74.0 Weakly correlated
158 L3 1 n.s 99.0 Highly correlated
159 LTR79 1 n.s 99.0 Highly correlated
160 MER89 1 n.s 99.0 Highly correlated
161 L1MD3 1 n.s 99.0 Highly correlated
162 L1ME2z 1 n.s 99.0 Highly correlated
163 L1ME3E 1 n.s 99.0 Highly correlated
164 LTR64 1 n.s 74.0 Weakly correlated
165 MER51-int 1 n.s 43.0 Weakly correlated
166 MER52A 1 n.s 74.0 Weakly correlated
167 MER90a 1 n.s 99.0 Highly correlated
168 MLT1J 1 n.s 99.0 Highly correlated
169 L1MA9 1 n.s 99.0 Highly correlated
170 LTR101_Mam 1 n.s 99.0 Highly correlated
171 LTR39 1 n.s 43.0 Weakly correlated
172 MLT1E3 1 n.s 99.0 Highly correlated
173 MLT1H-int 1 n.s 99.0 Highly correlated
174 THE1A-int 1 n.s 43.0 Weakly correlated
175 L1MB5 1 n.s 99.0 Highly correlated
176 L1MD 1 n.s 99.0 Highly correlated
177 L1MD2 1 n.s 99.0 Highly correlated
178 L1PBa1 1 n.s 74.0 Weakly correlated
179 L3b 1 n.s 99.0 Highly correlated
180 LTR102_Mam 1 n.s 99.0 Highly correlated
181 MER77 1 n.s 99.0 Highly correlated
182 SVA_C 1 n.s 15.2 Weakly correlated
183 THE1D 1 n.s 43.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 L2A 99.0 Highly correlated