ZRdb KZFP & Repeats
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Human_ZNF486

  • Protein
    Zinc finger protein 486
  • Length
    463
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    8.6 Mya
  • Time of Changing in binding specificity
    8.6 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MPGPLRSLEMESLQFRDVAVEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIIVSKPDLITCLEQGIKPLTMKRHEMIAKPPVVCSHFAQDLWPEQSIKDSYQKVILRKFEKCGHGNLHFKKGCESVDECKLHKRGYNGLNQCLTTTQSKIFQCGKYVKVFHQFSNSKRHKRRHTEKKPLKYIEGDKAFNQSSTHTTHKKIDTGEKPYKCEECGKAFNRSSHLTTHKITHTREKPYKCEECGKVFKYFSSFTTHKKIHSGEKPYICEECGKAFMYPYTLTTHKIIHTGEQPYKCKECDKAFNHPATLSSHKKIHTGEKPYTCDKCGKAFISSSILSKHEKIHTGEKPYKCEECGKAFTRSSHLTMHKIIHTGEKPYKCEECGKAFTWSAGLHKHRRTHTGEKPYKCEECGKAYTTSSNLTEHKTTHTGEKPYKCKECGKAFNWSSDLNKHKRIHIGQKPRT
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 13..84
2 dec2h2 154..176
3 C2h2 210..232
4 C2h2 238..260
5 C2h2 266..288
6 C2h2 294..316
7 C2h2 322..344
8 C2h2 350..372
9 C2h2 378..400
10 C2h2 406..428
11 C2h2 434..456
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component extracellular exosome
2 Cellular Component nucleus
3 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
4 Molecular Function metal ion binding
5 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
6 Biological Process regulation of DNA-templated transcription
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1PA5 3467 **** 19.6 Moderately correlated
2 L1PA4 3438 **** 19.6 Moderately correlated
3 L1PA7 3322 **** 74.0 Weakly correlated
4 L1PA3 2029 **** 19.6 Moderately correlated
5 L1PA6 2004 **** 28.9 Weakly correlated
6 THE1B-int 1467 **** 43.0 Weakly correlated
7 L1PA8 934 **** 74.0 Weakly correlated
8 L1PA16 722 **** 74.0 Weakly correlated
9 MSTA-int 701 **** 43.0 Weakly correlated
10 L1PA13 669 **** 74.0 Weakly correlated
11 THE1C-int 632 **** 43.0 Weakly correlated
12 THE1D-int 566 **** 28.9 Weakly correlated
13 L1PA10 474 **** 74.0 Weakly correlated
14 L1PA15 454 **** 74.0 Weakly correlated
15 L1P1 420 **** 19.6 Moderately correlated
16 THE1A-int 409 **** 43.0 Weakly correlated
17 L1PREC2 396 **** 43.0 Weakly correlated
18 MER41-int 300 **** 74.0 Weakly correlated
19 L1PA2 284 **** 15.2 Moderately correlated
20 L1PA11 261 **** 74.0 Weakly correlated
21 L1PA14 244 **** 74.0 Weakly correlated
22 MER4-int 244 **** 74.0 Weakly correlated
23 LTR18A 193 **** 43.0 Weakly correlated
24 MSTB-int 192 **** 43.0 Weakly correlated
25 L1PA8A 191 **** 74.0 Weakly correlated
26 L1PA17 184 **** 74.0 Weakly correlated
27 L1MB7 169 **** 99.0 Weakly correlated
28 L1P2 168 **** 28.9 Weakly correlated
29 L1MB5 166 **** 99.0 Weakly correlated
30 L1PB1 166 * 74.0 Weakly correlated
31 AluY 163 n.s 74.0 Weakly correlated
32 L2a 148 n.s 99.0 Weakly correlated
33 MIRb 141 n.s 99.0 Weakly correlated
34 L1MB3 137 **** 99.0 Weakly correlated
35 AluSx 135 n.s 74.0 Weakly correlated
36 L1MA3 125 *** 74.0 Weakly correlated
37 MIR 121 n.s 99.0 Weakly correlated
38 AluSx1 116 n.s 74.0 Weakly correlated
39 L1PA12 114 **** 74.0 Weakly correlated
40 L1ME1 111 n.s 99.0 Weakly correlated
41 L1MA2 110 *** 74.0 Weakly correlated
42 L1ME4b 110 **** 99.0 Weakly correlated
43 LTR18B 110 **** 43.0 Weakly correlated
44 MER61-int 110 **** 43.0 Weakly correlated
45 AluJb 104 n.s 74.0 Weakly correlated
46 L2c 104 n.s 99.0 Weakly correlated
47 L1PB4 100 **** 99.0 Weakly correlated
48 L1ME3 99 **** 99.0 Weakly correlated
49 AluSz 95 n.s 74.0 Weakly correlated
50 L1P3 92 **** 74.0 Weakly correlated
51 AluSp 84 n.s 74.0 Weakly correlated
52 HERVL18-int 80 **** 43.0 Weakly correlated
53 L1MB8 78 n.s 99.0 Weakly correlated
54 HUERS-P3b-int 73 **** 43.0 Weakly correlated
55 HUERS-P1-int 72 **** 43.0 Weakly correlated
56 L2b 72 n.s 99.0 Weakly correlated
57 AluJo 70 n.s 74.0 Weakly correlated
58 AluSq2 69 n.s 74.0 Weakly correlated
59 PABL_A-int 69 **** 74.0 Weakly correlated
60 AluJr 68 n.s 74.0 Weakly correlated
61 MIRc 68 n.s 99.0 Weakly correlated
62 LTR25-int 61 **** 43.0 Weakly correlated
63 L1M5 59 n.s 99.0 Weakly correlated
64 LTR18C 55 **** 43.0 Weakly correlated
65 HERV35I-int 53 **** 43.0 Weakly correlated
66 LTR28C 53 **** 43.0 Weakly correlated
67 HUERS-P3-int 52 **** 43.0 Weakly correlated
68 L1MA1 52 n.s 74.0 Weakly correlated
69 L1MA4 52 n.s 87.0 Weakly correlated
70 MER52A 51 **** 74.0 Weakly correlated
71 MER57-int 50 **** 87.0 Weakly correlated
72 AluSc 49 n.s 74.0 Weakly correlated
73 L1ME3A 49 n.s 99.0 Weakly correlated
74 THE1B 49 n.s 43.0 Weakly correlated
75 L1HS 48 * 8.6 Highly correlated
76 L1MA8 48 n.s 87.0 Weakly correlated
77 L1ME2 48 n.s 99.0 Weakly correlated
78 MLT1J 48 n.s 99.0 Weakly correlated
79 L1MD2 47 n.s 99.0 Weakly correlated
80 L2 47 n.s 99.0 Weakly correlated
81 MLT1H 47 *** 99.0 Weakly correlated
82 MIR3 46 n.s 99.0 Weakly correlated
83 MSTA 44 n.s 43.0 Weakly correlated
84 AluSg 43 n.s 74.0 Weakly correlated
85 L1ME3G 43 n.s 99.0 Weakly correlated
86 L1PB3 41 * 74.0 Weakly correlated
87 MER51-int 41 **** 43.0 Weakly correlated
88 MLT1H2 41 **** 99.0 Weakly correlated
89 AluSz6 40 n.s 74.0 Weakly correlated
90 L1MB2 40 n.s 99.0 Weakly correlated
91 L1MC1 40 n.s 99.0 Weakly correlated
92 L1MC4a 40 n.s 99.0 Weakly correlated
93 LTR27D 40 **** 43.0 Weakly correlated
94 L1MB4 39 n.s 99.0 Weakly correlated
95 L1MC5 37 n.s 99.0 Weakly correlated
96 L1MC5a 36 n.s 99.0 Weakly correlated
97 LTR8 36 **** 43.0 Weakly correlated
98 L1MA9 35 n.s 99.0 Weakly correlated
99 LTR27C 35 **** 43.0 Weakly correlated
100 AluSx3 34 n.s 74.0 Weakly correlated
101 HAL1 33 n.s 99.0 Weakly correlated
102 L1M1 33 n.s 74.0 Weakly correlated
103 L1MC4 33 n.s 99.0 Weakly correlated
104 MSTB1-int 33 **** 74.0 Weakly correlated
105 THE1-int 33 **** 43.0 Weakly correlated
106 AluSc8 32 n.s 74.0 Weakly correlated
107 L1ME3B 32 n.s 99.0 Weakly correlated
108 L1ME4a 32 n.s 99.0 Weakly correlated
109 MER83 32 **** 43.0 Weakly correlated
110 MLT1D 32 n.s 99.0 Weakly correlated
111 L1PB2 31 n.s 74.0 Weakly correlated
112 LTR49-int 31 **** 74.0 Weakly correlated
113 MLT1H1 31 **** 99.0 Weakly correlated
114 L1M4 30 n.s 99.0 Weakly correlated
115 L1MA6 30 n.s 87.0 Weakly correlated
116 LTR77 29 **** 94.0 Weakly correlated
117 L1MA5 28 n.s 87.0 Weakly correlated
118 L1MEd 28 n.s 99.0 Weakly correlated
119 LTR22C0 28 **** 28.9 Weakly correlated
120 LTR27E 28 **** 43.0 Weakly correlated
121 L1M2 27 n.s 99.0 Weakly correlated
122 L1MEc 27 n.s 99.0 Weakly correlated
123 L3 27 n.s 99.0 Weakly correlated
124 LOR1a 27 **** 74.0 Weakly correlated
125 LTR27B 27 **** 43.0 Weakly correlated
126 LOR1-int 26 **** 74.0 Weakly correlated
127 LTR22E 26 **** 28.9 Weakly correlated
128 L1MA7 25 n.s 87.0 Weakly correlated
129 L1P4 25 n.s 74.0 Weakly correlated
130 L1MB1 24 n.s 99.0 Weakly correlated
131 L1ME3E 24 * 99.0 Weakly correlated
132 MLT1C 23 n.s 94.0 Weakly correlated
133 MLT1G1 22 ** 99.0 Weakly correlated
134 MST-int 22 **** 74.0 Weakly correlated
135 THE1C 22 n.s 43.0 Weakly correlated
136 L1MA4A 21 n.s 87.0 Weakly correlated
137 L1MCa 21 n.s 99.0 Weakly correlated
138 MER50-int 21 **** 43.0 Weakly correlated
139 L1MD1 20 n.s 99.0 Weakly correlated
140 LTR22C2 19 **** 28.9 Weakly correlated
141 MER61E 19 **** 43.0 Weakly correlated
142 AluYj4 18 *** 0.0 Weakly correlated
143 FLAM_C 18 n.s 74.0 Weakly correlated
144 L1ME3D 18 n.s 99.0 Weakly correlated
145 L1ME3F 18 n.s 99.0 Weakly correlated
146 L1MEf 18 n.s 99.0 Weakly correlated
147 THE1D 18 n.s 43.0 Weakly correlated
148 L1ME2z 17 n.s 99.0 Weakly correlated
149 L1ME4c 17 n.s 99.0 Weakly correlated
150 L1MEg 17 n.s 99.0 Weakly correlated
151 L1MDa 16 n.s 99.0 Weakly correlated
152 AluSx4 15 n.s 74.0 Weakly correlated
153 L1ME3Cz 15 n.s 99.0 Weakly correlated
154 LTR2752 15 **** 43.0 Weakly correlated
155 MLT1B 15 n.s 99.0 Weakly correlated
156 AluSq 14 n.s 74.0 Weakly correlated
157 HERVH-int 14 n.s 28.9 Weakly correlated
158 MLT1K 14 n.s 99.0 Weakly correlated
159 L1M7 13 n.s 99.0 Weakly correlated
160 L1PBa 13 n.s 74.0 Weakly correlated
161 MLT1L 13 n.s 99.0 Weakly correlated
162 MamRTE1 13 n.s 99.0 Weakly correlated
163 L1MC3 12 n.s 99.0 Weakly correlated
164 MER50 12 n.s 43.0 Weakly correlated
165 MLT1A0 12 n.s 99.0 Weakly correlated
166 Alu 11 **** 74.0 Weakly correlated
167 AluSg7 11 n.s 74.0 Weakly correlated
168 ERV3-16A3_I-int 11 n.s 99.0 Weakly correlated
169 L1M4b 11 n.s 99.0 Weakly correlated
170 L1MA5A 11 n.s 87.0 Weakly correlated
171 L1MC 11 n.s 99.0 Weakly correlated
172 L1MC2 11 n.s 99.0 Weakly correlated
173 LTR22B 11 **** 28.9 Weakly correlated
174 LTR76 11 **** 74.0 Weakly correlated
175 LTR9A1 11 **** 43.0 Weakly correlated
176 MER41B 11 n.s 74.0 Weakly correlated
177 MER4B-int 11 n.s 99.0 Weakly correlated
178 MLT1F 11 n.s 99.0 Weakly correlated
179 MLT1I 11 n.s 99.0 Weakly correlated
180 MSTB 11 n.s 43.0 Weakly correlated
181 MSTC-int 11 **** 74.0 Weakly correlated
182 FAM 10 n.s 87.0 Weakly correlated
183 HERVFH21-int 10 **** 28.9 Weakly correlated
184 LTR67B 10 n.s 99.0 Weakly correlated
185 MER4A1 10 n.s 74.0 Weakly correlated
186 MER61F 10 **** 43.0 Weakly correlated
187 AluSc5 9 n.s 74.0 Weakly correlated
188 AluSg4 9 n.s 74.0 Weakly correlated
189 AluYm1 9 n.s 19.6 Moderately correlated
190 L1M3 9 n.s 99.0 Weakly correlated
191 L1MD 9 n.s 99.0 Weakly correlated
192 L1ME3C 9 n.s 99.0 Weakly correlated
193 L1PBa1 9 n.s 74.0 Weakly correlated
194 LTR27 9 **** 43.0 Weakly correlated
195 MLT2B1 9 n.s 99.0 Weakly correlated
196 FLAM_A 8 n.s 74.0 Weakly correlated
197 HERVE-int 8 n.s 19.6 Moderately correlated
198 L1M6 8 n.s 99.0 Weakly correlated
199 L1P 8 **** 19.6 Moderately correlated
200 LTR19C 8 **** 43.0 Weakly correlated
201 LTR21A 8 **** 28.9 Weakly correlated
202 LTR22B1 8 **** 28.9 Weakly correlated
203 MER101-int 8 n.s 74.0 Weakly correlated
204 MER66-int 8 n.s 43.0 Weakly correlated
205 MLT1G3 8 n.s 99.0 Weakly correlated
206 MLT1N2 8 n.s 99.0 Weakly correlated
207 MSTB2-int 8 **** 74.0 Weakly correlated
208 AluYb8 7 n.s 15.2 Moderately correlated
209 ERVL-E-int 7 n.s 99.0 Weakly correlated
210 HAL1M8 7 n.s 99.0 Weakly correlated
211 HAL1ME 7 n.s 99.0 Weakly correlated
212 HERVIP10FH-int 7 n.s 28.9 Weakly correlated
213 L1MCb 7 n.s 99.0 Weakly correlated
214 L1ME5 7 n.s 99.0 Weakly correlated
215 L3b 7 n.s 99.0 Weakly correlated
216 LTR16A 7 n.s 99.0 Weakly correlated
217 LTR16A1 7 n.s 99.0 Weakly correlated
218 LTR19-int 7 *** 43.0 Weakly correlated
219 LTR33 7 n.s 99.0 Weakly correlated
220 LTR40b 7 * 99.0 Weakly correlated
221 LTR49 7 n.s 74.0 Weakly correlated
222 LTR7 7 n.s 19.6 Moderately correlated
223 MER52-int 7 n.s 99.0 Weakly correlated
224 MER83C 7 **** 43.0 Weakly correlated
225 MLT1A 7 n.s 99.0 Weakly correlated
226 MLT1E1A 7 n.s 99.0 Weakly correlated
227 MLT1F1 7 n.s 99.0 Weakly correlated
228 MLT1J1 7 n.s 99.0 Weakly correlated
229 MLT2B4 7 n.s 99.0 Weakly correlated
230 MSTC 7 n.s 74.0 Weakly correlated
231 MamSINE1 7 n.s 99.0 Weakly correlated
232 THE1A 7 n.s 43.0 Weakly correlated
233 AluJr4 6 n.s 74.0 Weakly correlated
234 AluYa5 6 n.s 15.2 Moderately correlated
235 ERVL-B4-int 6 n.s 99.0 Weakly correlated
236 L1MD3 6 n.s 99.0 Weakly correlated
237 LTR10A 6 ** 28.9 Weakly correlated
238 LTR78 6 n.s 99.0 Weakly correlated
239 LTR8A 6 n.s 43.0 Weakly correlated
240 MER11C 6 n.s 19.6 Moderately correlated
241 MER41E 6 *** 74.0 Weakly correlated
242 MER61D 6 *** 43.0 Weakly correlated
243 MSTD-int 6 n.s 74.0 Weakly correlated
244 SVA_B 6 n.s 15.2 Moderately correlated
245 AluYc 5 n.s 74.0 Weakly correlated
246 FRAM 5 n.s 74.0 Weakly correlated
247 HAL1b 5 n.s 99.0 Weakly correlated
248 HERV15-int 5 * 28.9 Weakly correlated
249 HERVK22-int 5 n.s 43.0 Weakly correlated
250 L1M4a2 5 n.s 99.0 Weakly correlated
251 L1M4c 5 n.s 99.0 Weakly correlated
252 L1MCc 5 n.s 99.0 Weakly correlated
253 L1MEi 5 n.s 99.0 Weakly correlated
254 L1P5 5 ** 74.0 Weakly correlated
255 L4_A_Mam 5 n.s 99.0 Weakly correlated
256 LTR10F 5 * 28.9 Weakly correlated
257 LTR12C 5 n.s 19.6 Moderately correlated
258 LTR12_ 5 n.s 28.9 Weakly correlated
259 LTR13 5 n.s 19.6 Moderately correlated
260 LTR22C 5 **** 28.9 Weakly correlated
261 LTR25 5 ** 43.0 Weakly correlated
262 LTR28 5 ** 43.0 Weakly correlated
263 LTR37A 5 n.s 99.0 Weakly correlated
264 LTR7B 5 n.s 28.9 Weakly correlated
265 LTR82A 5 n.s 99.0 Weakly correlated
266 MER11A 5 n.s 28.9 Weakly correlated
267 MER31-int 5 n.s 99.0 Weakly correlated
268 MER41A 5 n.s 74.0 Weakly correlated
269 MER67C 5 n.s 99.0 Weakly correlated
270 MER83B-int 5 ** 99.0 Weakly correlated
271 MLT1E2 5 n.s 99.0 Weakly correlated
272 MLT1F2 5 n.s 99.0 Weakly correlated
273 MLT2A1 5 n.s 74.0 Weakly correlated
274 PRIMA41-int 5 n.s 74.0 Weakly correlated
275 AluSq10 4 n.s 74.0 Weakly correlated
276 AluYg6 4 * 15.2 Moderately correlated
277 CR1_Mam 4 n.s 99.0 Weakly correlated
278 HERV16-int 4 n.s 99.0 Weakly correlated
279 HERV17-int 4 n.s 28.9 Weakly correlated
280 HERV1_I-int 4 ** 43.0 Weakly correlated
281 HERV4_I-int 4 n.s 43.0 Weakly correlated
282 HERVK13-int 4 ** 19.6 Moderately correlated
283 L1M3c 4 n.s 99.0 Weakly correlated
284 L1M8 4 n.s 99.0 Weakly correlated
285 L1MA10 4 n.s 99.0 Weakly correlated
286 L1MEh 4 n.s 99.0 Weakly correlated
287 L1PA15-16 4 n.s 74.0 Weakly correlated
288 LTR19A 4 * 43.0 Weakly correlated
289 LTR39 4 n.s 43.0 Weakly correlated
290 LTR4 4 *** 28.9 Weakly correlated
291 LTR48B 4 n.s 74.0 Weakly correlated
292 LTR50 4 n.s 99.0 Weakly correlated
293 LTR8B 4 n.s 43.0 Weakly correlated
294 MER21B 4 n.s 99.0 Weakly correlated
295 MER21C 4 n.s 99.0 Weakly correlated
296 MER31A 4 n.s 87.0 Weakly correlated
297 MER39 4 n.s 74.0 Weakly correlated
298 MER4D 4 n.s 74.0 Weakly correlated
299 MER52D 4 n.s 74.0 Weakly correlated
300 MER57D 4 * 87.0 Weakly correlated
301 MER61C 4 ** 43.0 Weakly correlated
302 MER66B 4 n.s 43.0 Weakly correlated
303 MIR1_Amn 4 n.s 319.0 Weakly correlated
304 MLT1G 4 n.s 99.0 Weakly correlated
305 MLT1J2 4 n.s 99.0 Weakly correlated
306 MLT2B3 4 n.s 99.0 Weakly correlated
307 MSTA1-int 4 **** 74.0 Weakly correlated
308 AluSq4 3 n.s 74.0 Weakly correlated
309 AluYf1 3 n.s 19.6 Moderately correlated
310 HERVL-int 3 n.s 74.0 Weakly correlated
311 Harlequin-int 3 n.s 74.0 Weakly correlated
312 L1M 3 * 74.0 Weakly correlated
313 L1M3e 3 n.s 99.0 Weakly correlated
314 L1MEb 3 n.s 99.0 Weakly correlated
315 LOR1b 3 n.s 74.0 Weakly correlated
316 LTR15 3 * 28.9 Weakly correlated
317 LTR16B1 3 n.s 99.0 Weakly correlated
318 LTR16C 3 n.s 99.0 Weakly correlated
319 LTR16E2 3 n.s 99.0 Weakly correlated
320 LTR2 3 n.s 28.9 Weakly correlated
321 LTR33A_ 3 n.s 99.0 Weakly correlated
322 LTR40a 3 n.s 99.0 Weakly correlated
323 LTR42 3 * 74.0 Weakly correlated
324 LTR45C 3 n.s 99.0 Weakly correlated
325 LTR52-int 3 ** 99.0 Weakly correlated
326 LTR7Y 3 * 8.6 Highly correlated
327 LTR82B 3 n.s 99.0 Weakly correlated
328 LTR9D 3 n.s 43.0 Weakly correlated
329 MER21A 3 n.s 74.0 Weakly correlated
330 MER39B 3 n.s 74.0 Weakly correlated
331 MER4A 3 n.s 74.0 Weakly correlated
332 MER4E 3 n.s 74.0 Weakly correlated
333 MER72 3 n.s 43.0 Weakly correlated
334 MER74B 3 n.s 99.0 Weakly correlated
335 MER77B 3 n.s 99.0 Weakly correlated
336 MER90a 3 n.s 99.0 Weakly correlated
337 MLT1A1 3 n.s 87.0 Weakly correlated
338 MLT2D 3 n.s 99.0 Weakly correlated
339 MSTD 3 n.s 74.0 Weakly correlated
340 X7B_LINE 3 * 319.0 Weakly correlated
341 AluYe5 2 n.s 74.0 Weakly correlated
342 AluYh3 2 n.s 15.2 Moderately correlated
343 AluYi6_4d 2 ** 0.0 Weakly correlated
344 AmnSINE1 2 n.s 319.0 Weakly correlated
345 ERVL-int 2 n.s 99.0 Weakly correlated
346 HERVI-int 2 n.s 28.9 Weakly correlated
347 HERVK14-int 2 n.s 28.9 Weakly correlated
348 L1M3de 2 n.s 99.0 Weakly correlated
349 L1MDb 2 n.s 99.0 Weakly correlated
350 L1P4d 2 n.s 74.0 Weakly correlated
351 L1P4e 2 n.s 74.0 Weakly correlated
352 L1PB 2 n.s 74.0 Weakly correlated
353 L2-3_Crp 2 n.s 431.0 Weakly correlated
354 LTR101_Mam 2 n.s 99.0 Weakly correlated
355 LTR10B2 2 ** 28.9 Weakly correlated
356 LTR10E 2 n.s 28.9 Weakly correlated
357 LTR12F 2 n.s 28.9 Weakly correlated
358 LTR16 2 n.s 99.0 Weakly correlated
359 LTR16E1 2 n.s 99.0 Weakly correlated
360 LTR1B 2 n.s 43.0 Weakly correlated
361 LTR21B 2 *** 28.9 Weakly correlated
362 LTR22 2 * 28.9 Weakly correlated
363 LTR28B 2 n.s 43.0 Weakly correlated
364 LTR32 2 n.s 43.0 Weakly correlated
365 LTR33A 2 n.s 99.0 Weakly correlated
366 LTR33B 2 n.s 99.0 Weakly correlated
367 LTR35B 2 * 43.0 Weakly correlated
368 LTR40c 2 n.s 99.0 Weakly correlated
369 LTR41C 2 n.s 99.0 Weakly correlated
370 LTR45B 2 n.s 74.0 Weakly correlated
371 LTR53 2 n.s 99.0 Weakly correlated
372 LTR55 2 n.s 99.0 Weakly correlated
373 LTR5A 2 n.s 19.6 Moderately correlated
374 LTR5_Hs 2 n.s 0.0 Weakly correlated
375 LTR62 2 n.s 74.0 Weakly correlated
376 LTR68 2 n.s 99.0 Weakly correlated
377 LTR79 2 n.s 99.0 Weakly correlated
378 LTR85c 2 n.s 99.0 Weakly correlated
379 LTR88a 2 n.s 99.0 Weakly correlated
380 LTR88c 2 n.s 99.0 Weakly correlated
381 LTR9 2 n.s 43.0 Weakly correlated
382 MER31B 2 n.s 99.0 Weakly correlated
383 MER34A1 2 n.s 99.0 Weakly correlated
384 MER34B-int 2 n.s 99.0 Weakly correlated
385 MER41C 2 n.s 74.0 Weakly correlated
386 MER41D 2 n.s 74.0 Weakly correlated
387 MER4E1 2 n.s 74.0 Weakly correlated
388 MER51B 2 n.s 43.0 Weakly correlated
389 MER52C 2 n.s 74.0 Weakly correlated
390 MER57A1 2 n.s 43.0 Weakly correlated
391 MER65-int 2 n.s 87.0 Weakly correlated
392 MER65A 2 n.s 74.0 Weakly correlated
393 MER66C 2 n.s 43.0 Weakly correlated
394 MER67D 2 n.s 99.0 Weakly correlated
395 MER68 2 n.s 99.0 Weakly correlated
396 MER74A 2 n.s 99.0 Weakly correlated
397 MER76 2 n.s 99.0 Weakly correlated
398 MER77 2 n.s 99.0 Weakly correlated
399 MER9a1 2 n.s 19.6 Moderately correlated
400 MLT-int 2 n.s 99.0 Weakly correlated
401 MLT1E3 2 n.s 99.0 Weakly correlated
402 MLT1G1-int 2 n.s 99.0 Weakly correlated
403 MLT1O 2 n.s 99.0 Weakly correlated
404 MLT2A2 2 n.s 74.0 Weakly correlated
405 MLT2C1 2 n.s 99.0 Weakly correlated
406 MamGyp-int 2 n.s 99.0 Weakly correlated
407 MamGypLTR1c 2 n.s 99.0 Weakly correlated
408 MamGypLTR3a 2 n.s 99.0 Weakly correlated
409 MamGypsy2-I 2 n.s 99.0 Weakly correlated
410 MamGypsy2-LTR 2 n.s 99.0 Weakly correlated
411 MamRep1151 2 n.s 99.0 Weakly correlated
412 MamRep605 2 n.s 99.0 Weakly correlated
413 Plat_L3 2 n.s 99.0 Weakly correlated
414 SVA_D 2 n.s 15.2 Moderately correlated
415 SVA_E 2 n.s 0.0 Weakly correlated
416 AluYa8 1 n.s 15.2 Moderately correlated
417 AluYb9 1 n.s 15.2 Moderately correlated
418 AluYh9 1 ** 15.2 Moderately correlated
419 AluYk11 1 n.s 15.2 Moderately correlated
420 AluYk3 1 n.s 19.6 Moderately correlated
421 AluYk4 1 n.s 15.2 Moderately correlated
422 ERV24B_Prim-int 1 n.s 74.0 Weakly correlated
423 HERV3-int 1 n.s 28.9 Weakly correlated
424 HERV9N-int 1 n.s 19.6 Moderately correlated
425 HERVH48-int 1 n.s 28.9 Weakly correlated
426 HERVK-int 1 n.s 28.9 Weakly correlated
427 HERVL40-int 1 n.s 99.0 Weakly correlated
428 HERVP71A-int 1 n.s 43.0 Weakly correlated
429 HERVS71-int 1 n.s 28.9 Weakly correlated
430 HUERS-P2-int 1 n.s 43.0 Weakly correlated
431 L1M2a 1 n.s 87.0 Weakly correlated
432 L1M4a1 1 n.s 99.0 Weakly correlated
433 L1MEj 1 n.s 99.0 Weakly correlated
434 L1P4a 1 n.s 74.0 Weakly correlated
435 L1PBb 1 n.s 74.0 Weakly correlated
436 L4_B_Mam 1 n.s 99.0 Weakly correlated
437 L4_C_Mam 1 n.s 99.0 Weakly correlated
438 LTR1 1 n.s 43.0 Weakly correlated
439 LTR107_Mam 1 n.s 99.0 Weakly correlated
440 LTR10C 1 n.s 28.9 Weakly correlated
441 LTR14C 1 n.s 28.9 Weakly correlated
442 LTR16B2 1 n.s 99.0 Weakly correlated
443 LTR16D 1 n.s 99.0 Weakly correlated
444 LTR16D1 1 n.s 99.0 Weakly correlated
445 LTR19B 1 n.s 43.0 Weakly correlated
446 LTR1A2 1 n.s 43.0 Weakly correlated
447 LTR1C1 1 n.s 43.0 Weakly correlated
448 LTR1D 1 n.s 43.0 Weakly correlated
449 LTR1F2 1 n.s 43.0 Weakly correlated
450 LTR29 1 n.s 43.0 Weakly correlated
451 LTR2B 1 n.s 19.6 Moderately correlated
452 LTR30 1 n.s 28.9 Weakly correlated
453 LTR35A 1 * 43.0 Weakly correlated
454 LTR36 1 n.s 74.0 Weakly correlated
455 LTR37-int 1 n.s 99.0 Weakly correlated
456 LTR39-int 1 n.s 43.0 Weakly correlated
457 LTR40A1 1 n.s 99.0 Weakly correlated
458 LTR41 1 n.s 99.0 Weakly correlated
459 LTR41B 1 n.s 99.0 Weakly correlated
460 LTR46 1 n.s 43.0 Weakly correlated
461 LTR46-int 1 n.s 74.0 Weakly correlated
462 LTR47A 1 n.s 74.0 Weakly correlated
463 LTR48 1 n.s 74.0 Weakly correlated
464 LTR52 1 n.s 99.0 Weakly correlated
465 LTR53-int 1 n.s 99.0 Weakly correlated
466 LTR54 1 n.s 74.0 Weakly correlated
467 LTR57 1 n.s 74.0 Weakly correlated
468 LTR5B 1 n.s 28.9 Weakly correlated
469 LTR6A 1 n.s 28.9 Weakly correlated
470 LTR6B 1 n.s 19.6 Moderately correlated
471 LTR70 1 n.s 74.0 Weakly correlated
472 LTR71B 1 n.s 43.0 Weakly correlated
473 LTR72 1 n.s 74.0 Weakly correlated
474 LTR75 1 n.s 99.0 Weakly correlated
475 LTR78B 1 n.s 99.0 Weakly correlated
476 LTR7C 1 n.s 28.9 Weakly correlated
477 LTR81A 1 n.s 99.0 Weakly correlated
478 LTR84b 1 n.s 99.0 Weakly correlated
479 LTR85a 1 n.s 99.0 Weakly correlated
480 LTR85b 1 n.s 99.0 Weakly correlated
481 LTR88b 1 n.s 99.0 Weakly correlated
482 LTR89 1 n.s 99.0 Weakly correlated
483 LTR9B 1 n.s 43.0 Weakly correlated
484 MER101 1 n.s 74.0 Weakly correlated
485 MER110A 1 n.s 99.0 Weakly correlated
486 MER11B 1 n.s 19.6 Moderately correlated
487 MER21-int 1 n.s 99.0 Weakly correlated
488 MER34B 1 n.s 87.0 Weakly correlated
489 MER34D 1 n.s 74.0 Weakly correlated
490 MER48 1 n.s 28.9 Weakly correlated
491 MER49 1 n.s 43.0 Weakly correlated
492 MER4B 1 n.s 74.0 Weakly correlated
493 MER4C 1 n.s 74.0 Weakly correlated
494 MER4D0 1 n.s 74.0 Weakly correlated
495 MER50B 1 n.s 43.0 Weakly correlated
496 MER51A 1 n.s 43.0 Weakly correlated
497 MER54B 1 n.s 87.0 Weakly correlated
498 MER57A-int 1 n.s 43.0 Weakly correlated
499 MER57B1 1 n.s 43.0 Weakly correlated
500 MER61A 1 n.s 43.0 Weakly correlated
501 MER61B 1 n.s 43.0 Weakly correlated
502 MER70A 1 n.s 87.0 Weakly correlated
503 MER83B 1 n.s 43.0 Weakly correlated
504 MER84 1 n.s 43.0 Weakly correlated
505 MER89 1 n.s 99.0 Weakly correlated
506 MER89-int 1 n.s 99.0 Weakly correlated
507 MER90 1 n.s 99.0 Weakly correlated
508 MER92B 1 n.s 99.0 Weakly correlated
509 MER9a2 1 n.s 19.6 Moderately correlated
510 MLT1B-int 1 n.s 99.0 Weakly correlated
511 MLT1C-int 1 n.s 94.0 Weakly correlated
512 MLT1D-int 1 n.s 99.0 Weakly correlated
513 MLT1E-int 1 ** 99.0 Weakly correlated
514 MLT1F-int 1 n.s 99.0 Weakly correlated
515 MLT1H-int 1 n.s 99.0 Weakly correlated
516 MLT1I-int 1 n.s 99.0 Weakly correlated
517 MLT1J-int 1 n.s 99.0 Weakly correlated
518 MLT1J1-int 1 n.s 99.0 Weakly correlated
519 MLT1M 1 n.s 99.0 Weakly correlated
520 MLT2C2 1 n.s 99.0 Weakly correlated
521 MLT2F 1 n.s 99.0 Weakly correlated
522 MSTA1 1 n.s 74.0 Weakly correlated
523 Mam_R4 1 n.s 99.0 Weakly correlated
524 PABL_A 1 n.s 43.0 Weakly correlated
525 SVA_A 1 n.s 19.6 Moderately correlated
526 X6A_LINE 1 n.s 99.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L1PA7 2453 **** 74.0 Weakly correlated
2 L1PA5 2431 **** 19.6 Moderately correlated
3 L1PA4 2214 **** 19.6 Moderately correlated
4 L1PA6 1418 **** 28.9 Weakly correlated
5 L1PA3 1255 **** 19.6 Moderately correlated
6 L1PA8 735 **** 74.0 Weakly correlated
7 L1PA16 541 **** 74.0 Weakly correlated
8 L1PA13 519 **** 74.0 Weakly correlated
9 L1PA10 382 **** 74.0 Weakly correlated
10 L1PA15 346 **** 74.0 Weakly correlated
11 L1PREC2 288 **** 43.0 Weakly correlated
12 L1PA11 209 **** 74.0 Weakly correlated
13 L1PA14 202 **** 74.0 Weakly correlated
14 L1PA2 193 **** 15.2 Moderately correlated
15 L1P1 160 **** 19.6 Moderately correlated
16 L1PA8A 148 **** 74.0 Weakly correlated
17 L1PA17 136 **** 74.0 Weakly correlated
18 L1PB1 96 n.s 74.0 Weakly correlated
19 L1MB5 95 **** 99.0 Weakly correlated
20 L1MA3 86 n.s 74.0 Weakly correlated
21 L1P2 86 **** 28.9 Weakly correlated
22 L1MB7 83 n.s 99.0 Weakly correlated
23 L1MA2 80 n.s 74.0 Weakly correlated
24 L1PA12 78 **** 74.0 Weakly correlated
25 THE1B-int 77 *** 43.0 Weakly correlated
26 L1MB3 74 n.s 99.0 Weakly correlated
27 L1PB4 63 ** 99.0 Weakly correlated
28 L1ME4b 61 n.s 99.0 Weakly correlated
29 MSTA-int 56 **** 43.0 Weakly correlated
30 MSTB-int 49 **** 43.0 Weakly correlated
31 THE1C-int 44 **** 43.0 Weakly correlated
32 THE1D-int 38 ** 28.9 Weakly correlated
33 L1MA1 34 n.s 74.0 Weakly correlated
34 L1MB2 31 n.s 99.0 Weakly correlated
35 L1PB3 31 n.s 74.0 Weakly correlated
36 L1HS 30 n.s 8.6 Highly correlated
37 L1MA4 29 n.s 87.0 Weakly correlated
38 L1MB8 28 n.s 99.0 Weakly correlated
39 L1P3 24 n.s 74.0 Weakly correlated
40 L1ME3G 22 n.s 99.0 Weakly correlated
41 L1PB2 21 n.s 74.0 Weakly correlated
42 L1MA8 20 n.s 87.0 Weakly correlated
43 L1MC4a 20 n.s 99.0 Weakly correlated
44 L1ME1 19 n.s 99.0 Weakly correlated
45 L1MB4 17 n.s 99.0 Weakly correlated
46 L1ME4a 17 n.s 99.0 Weakly correlated
47 L1MA7 17 n.s 87.0 Weakly correlated
48 L1ME3 16 n.s 99.0 Weakly correlated
49 LTR18A 16 **** 43.0 Weakly correlated
50 L1MA5 16 n.s 87.0 Weakly correlated
51 LTR18B 16 **** 43.0 Weakly correlated
52 L1MA6 14 n.s 87.0 Weakly correlated
53 L1MA9 13 n.s 99.0 Weakly correlated
54 LTR18C 13 **** 43.0 Weakly correlated
55 L1MA4A 11 n.s 87.0 Weakly correlated
56 L1MA5A 9 n.s 87.0 Weakly correlated
57 L1MB1 9 n.s 99.0 Weakly correlated
58 L1MD2 8 n.s 99.0 Weakly correlated
59 THE1A-int 8 n.s 43.0 Weakly correlated
60 L1ME3E 6 n.s 99.0 Weakly correlated
61 L1MC5a 6 n.s 99.0 Weakly correlated
62 L1ME4c 6 n.s 99.0 Weakly correlated
63 MST-int 6 **** 74.0 Weakly correlated
64 L1MD1 5 n.s 99.0 Weakly correlated
65 L1M5 4 n.s 99.0 Weakly correlated
66 L1MC2 4 n.s 99.0 Weakly correlated
67 L1ME3B 4 n.s 99.0 Weakly correlated
68 MSTB1-int 4 * 74.0 Weakly correlated
69 L1MC1 4 n.s 99.0 Weakly correlated
70 L1ME2 4 n.s 99.0 Weakly correlated
71 LTR22C2 4 **** 28.9 Weakly correlated
72 L2a 4 n.s 99.0 Weakly correlated
73 L1MC 3 n.s 99.0 Weakly correlated
74 AluJr 3 n.s 74.0 Weakly correlated
75 MLT1F 3 n.s 99.0 Weakly correlated
76 MLT1J 3 n.s 99.0 Weakly correlated
77 MLT1H 3 n.s 99.0 Weakly correlated
78 AluSx1 3 n.s 74.0 Weakly correlated
79 MER41-int 3 n.s 74.0 Weakly correlated
80 HUERS-P1-int 3 n.s 43.0 Weakly correlated
81 L1MC4 3 n.s 99.0 Weakly correlated
82 L2c 3 n.s 99.0 Weakly correlated
83 L1MC5 3 n.s 99.0 Weakly correlated
84 L2b 3 n.s 99.0 Weakly correlated
85 LTR27D 3 * 43.0 Weakly correlated
86 AluSp 3 n.s 74.0 Weakly correlated
87 MER57-int 3 n.s 87.0 Weakly correlated
88 HERV35I-int 2 n.s 43.0 Weakly correlated
89 HERVL18-int 2 n.s 43.0 Weakly correlated
90 L1M1 2 n.s 74.0 Weakly correlated
91 L1MD3 2 n.s 99.0 Weakly correlated
92 LTR22C 2 **** 28.9 Weakly correlated
93 MER83 2 n.s 43.0 Weakly correlated
94 AluY 2 n.s 74.0 Weakly correlated
95 MER52A 2 n.s 74.0 Weakly correlated
96 MER61-int 2 n.s 43.0 Weakly correlated
97 AluYj4 2 n.s 0.0 Weakly correlated
98 THE1-int 2 n.s 43.0 Weakly correlated
99 AluSx 2 n.s 74.0 Weakly correlated
100 L1ME3F 2 n.s 99.0 Weakly correlated
101 L1ME3Cz 2 n.s 99.0 Weakly correlated
102 AluSx3 1 n.s 74.0 Weakly correlated
103 AluSz6 1 n.s 74.0 Weakly correlated
104 ERV3-16A3_I-int 1 n.s 99.0 Weakly correlated
105 FAM 1 n.s 87.0 Weakly correlated
106 L1M3 1 n.s 99.0 Weakly correlated
107 L1ME3A 1 n.s 99.0 Weakly correlated
108 L1ME3D 1 n.s 99.0 Weakly correlated
109 L1MEc 1 n.s 99.0 Weakly correlated
110 MIRc 1 n.s 99.0 Weakly correlated
111 L1M2 1 n.s 99.0 Weakly correlated
112 L1MA10 1 n.s 99.0 Weakly correlated
113 L1MCc 1 n.s 99.0 Weakly correlated
114 L1MEf 1 n.s 99.0 Weakly correlated
115 LTR21A 1 n.s 28.9 Weakly correlated
116 LTR76 1 n.s 74.0 Weakly correlated
117 MSTA 1 n.s 43.0 Weakly correlated
118 PABL_A-int 1 n.s 74.0 Weakly correlated
119 AluJb 1 n.s 74.0 Weakly correlated
120 HAL1 1 n.s 99.0 Weakly correlated
121 LTR28C 1 n.s 43.0 Weakly correlated
122 LTR78 1 n.s 99.0 Weakly correlated
123 MER4-int 1 n.s 74.0 Weakly correlated
124 MER52D 1 n.s 74.0 Weakly correlated
125 MIR 1 n.s 99.0 Weakly correlated
126 MLT1N2 1 n.s 99.0 Weakly correlated
127 MamGypLTR3a 1 n.s 99.0 Weakly correlated
128 MamRTE1 1 n.s 99.0 Weakly correlated
129 L1ME3C 1 n.s 99.0 Weakly correlated
130 L1P4 1 n.s 74.0 Weakly correlated
131 L1PA15-16 1 n.s 74.0 Weakly correlated
132 LTR27 1 n.s 43.0 Weakly correlated
133 MLT1H2 1 n.s 99.0 Weakly correlated
134 MLT1K 1 n.s 99.0 Weakly correlated
135 AluSc 1 n.s 74.0 Weakly correlated
136 L1MEh 1 n.s 99.0 Weakly correlated
137 MER41B 1 n.s 74.0 Weakly correlated
138 MER61D 1 n.s 43.0 Weakly correlated
139 MER74B 1 n.s 99.0 Weakly correlated
140 MLT1B 1 n.s 99.0 Weakly correlated
141 MLT1G1 1 n.s 99.0 Weakly correlated
142 MSTC-int 1 n.s 74.0 Weakly correlated
143 L1ME2z 1 n.s 99.0 Weakly correlated
144 MER21C 1 n.s 99.0 Weakly correlated
145 MER4A1 1 n.s 74.0 Weakly correlated
146 MLT2B4 1 n.s 99.0 Weakly correlated
147 Alu 1 n.s 74.0 Weakly correlated
148 L1ME5 1 n.s 99.0 Weakly correlated
149 LTR33 1 n.s 99.0 Weakly correlated
150 MLT1E1A 1 n.s 99.0 Weakly correlated
151 MLT1L 1 n.s 99.0 Weakly correlated
152 AluSg 1 n.s 74.0 Weakly correlated
153 L1P4d 1 n.s 74.0 Weakly correlated
154 L1P5 1 n.s 74.0 Weakly correlated
155 LTR22E 1 n.s 28.9 Weakly correlated
156 LTR27B 1 n.s 43.0 Weakly correlated
157 LTR27E 1 n.s 43.0 Weakly correlated
158 MER52C 1 n.s 74.0 Weakly correlated
159 MER61E 1 n.s 43.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 L1HS 8.6 Highly correlated
2 L1MA1 74.0 Weakly correlated
3 L1MA2 74.0 Weakly correlated
4 L1MA3 74.0 Weakly correlated
5 L1MA4 87.0 Weakly correlated
6 L1MA4A 87.0 Weakly correlated
7 L1MA5 87.0 Weakly correlated
8 L1MA5A 87.0 Weakly correlated
9 L1MA6 87.0 Weakly correlated
10 L1MA7 87.0 Weakly correlated
11 L1MA8 87.0 Weakly correlated
12 L1MA9 99.0 Weakly correlated
13 L1MB1 99.0 Weakly correlated
14 L1MB2 99.0 Weakly correlated
15 L1MB3 99.0 Weakly correlated
16 L1MB4 99.0 Weakly correlated
17 L1MB5 99.0 Weakly correlated
18 L1MB7 99.0 Weakly correlated
19 L1MB8 99.0 Weakly correlated
20 L1MC4A 99.0 Weakly correlated
21 L1MC5A 99.0 Weakly correlated
22 L1MD2 99.0 Weakly correlated
23 L1ME1 99.0 Weakly correlated
24 L1ME3 99.0 Weakly correlated
25 L1ME3E 99.0 Weakly correlated
26 L1ME3G 99.0 Weakly correlated
27 L1ME4A 99.0 Weakly correlated
28 L1ME4B 99.0 Weakly correlated
29 L1ME4C 99.0 Weakly correlated
30 L1P1 19.6 Moderately correlated
31 L1P2 28.9 Weakly correlated
32 L1P3 74.0 Weakly correlated
33 L1PA10 74.0 Weakly correlated
34 L1PA11 74.0 Weakly correlated
35 L1PA12 74.0 Weakly correlated
36 L1PA13 74.0 Weakly correlated
37 L1PA14 74.0 Weakly correlated
38 L1PA15 74.0 Weakly correlated
39 L1PA16 74.0 Weakly correlated
40 L1PA17 74.0 Weakly correlated
41 L1PA2 15.2 Moderately correlated
42 L1PA3 19.6 Moderately correlated
43 L1PA4 19.6 Moderately correlated
44 L1PA5 19.6 Moderately correlated
45 L1PA6 28.9 Weakly correlated
46 L1PA7 74.0 Weakly correlated
47 L1PA8 74.0 Weakly correlated
48 L1PA8A 74.0 Weakly correlated
49 L1PB1 74.0 Weakly correlated
50 L1PB2 74.0 Weakly correlated
51 L1PB3 74.0 Weakly correlated
52 L1PB4 99.0 Weakly correlated
53 L1PREC2 43.0 Weakly correlated
54 LTR18B 43.0 Weakly correlated
55 LTR18C 43.0 Weakly correlated
56 MSTA-INT 43.0 Weakly correlated
57 MSTB-INT 43.0 Weakly correlated
58 THE1B-INT 43.0 Weakly correlated
59 THE1C-INT 43.0 Weakly correlated
60 THE1D-INT 28.9 Weakly correlated