ZRdb KZFP & Repeats
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Human_ZNF182

  • Protein
    Zinc finger protein 182
  • Length
    639
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    99.0 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MTPASASGEDSGSFYSWQKAKREQGLVTFEDVAVDFTQEEWQYLNPPQRTLYRDVMLETYSNLVFVGQQVTKPNLILKLEVEECPAEGKIPFWNFPEVCQVDEQIERQHQDDQDKCLLMQVGFSDKKTIITKSARDCHEFGNILHLSTNLVASIQRPDKHESFGNNMVDNLDLFSRSSAENKYDNGCAKLFFHTEYEKTNPGMKPYGYKECGKGLRRKKGLSLHQRIKNGEKPFECTACRKTFSKKSHLIVHWRTHTGEKPFGCTECGKAFSQKSQLIIHLRTHTGERPFECPECGKAFREKSTVIIHYRTHTGEKPYECNECGKAFTQKSNLIVHQKTHTGEKTYECTKCGESFIQKLDLIIHHSTHTGKKPHECNECKKTFSDKSTLIIHQRTHTGEKPHKCTECGKSFNEKSTLIVHQRTHTGEKPYECDVCGKTFTQKSNLGVHQRTHSGEKPFECNECEKAFSQKSYLMLHQRGHTGEKPYECNECEKAFSQKSYLIIHQRTHTEEKPYKCNECGKAFREKSKLIIHQRIHTGEKPYECPVCWKAFSQKSQLIIHQRTHTGEKPYACTECGKAFREKSTFTVHQRTHTGEKPYKCTECGKAFTQKSNLIVHQRTHAGKKAHGRGHTRKSKFMAH
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 27..98
2 dec2h2 206..228
3 C2h2 234..256
4 C2h2 262..284
5 C2h2 290..312
6 C2h2 318..340
7 C2h2 346..368
8 C2h2 374..396
9 C2h2 402..424
10 C2h2 430..452
11 C2h2 458..480
12 C2h2 486..508
13 C2h2 514..536
14 C2h2 542..564
15 C2h2 570..592
16 C2h2 598..620
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluY 874 **** 74.0 Weakly correlated
2 AluSx1 535 **** 74.0 Weakly correlated
3 AluJb 484 **** 74.0 Weakly correlated
4 AluSx 460 **** 74.0 Weakly correlated
5 AluSz 409 **** 74.0 Weakly correlated
6 AluSq2 286 **** 74.0 Weakly correlated
7 AluSp 252 **** 74.0 Weakly correlated
8 AluJo 206 **** 74.0 Weakly correlated
9 AluSc 205 **** 74.0 Weakly correlated
10 AluJr 192 **** 74.0 Weakly correlated
11 HAL1 181 **** 99.0 Highly correlated
12 AluSg 175 **** 74.0 Weakly correlated
13 AluSx3 165 **** 74.0 Weakly correlated
14 AluSz6 165 **** 74.0 Weakly correlated
15 AluSc8 111 **** 74.0 Weakly correlated
16 FLAM_C 103 **** 74.0 Weakly correlated
17 AluSq 94 **** 74.0 Weakly correlated
18 L1M5 92 **** 99.0 Highly correlated
19 L2a 91 n.s 99.0 Highly correlated
20 L1MEg 79 **** 99.0 Highly correlated
21 L1M4 78 **** 99.0 Highly correlated
22 L1ME1 75 **** 99.0 Highly correlated
23 L1PA2 72 **** 15.2 Weakly correlated
24 L1MEc 69 **** 99.0 Highly correlated
25 AluSx4 67 **** 74.0 Weakly correlated
26 AluSg7 63 **** 74.0 Weakly correlated
27 MIRb 63 n.s 99.0 Highly correlated
28 L1MEd 61 **** 99.0 Highly correlated
29 L1PB1 51 n.s 74.0 Weakly correlated
30 AluJr4 49 **** 74.0 Weakly correlated
31 L1MB7 49 ** 99.0 Highly correlated
32 AluYc 48 **** 74.0 Weakly correlated
33 L1MEf 48 **** 99.0 Highly correlated
34 MIR 47 n.s 99.0 Highly correlated
35 L1PA3 45 n.s 19.6 Weakly correlated
36 FLAM_A 44 **** 74.0 Weakly correlated
37 L2c 39 n.s 99.0 Highly correlated
38 MIRc 36 n.s 99.0 Highly correlated
39 L2b 34 n.s 99.0 Highly correlated
40 AluSc5 33 **** 74.0 Weakly correlated
41 AluYj4 32 **** 0.0 Weakly correlated
42 L1MDa 32 **** 99.0 Highly correlated
43 L1PA7 32 n.s 74.0 Weakly correlated
44 AluYm1 31 **** 19.6 Weakly correlated
45 AluYh3 28 **** 15.2 Weakly correlated
46 HAL1ME 28 **** 99.0 Highly correlated
47 L1MCa 28 **** 99.0 Highly correlated
48 AluSg4 27 **** 74.0 Weakly correlated
49 L1MC1 27 n.s 99.0 Highly correlated
50 L1MC4 27 n.s 99.0 Highly correlated
51 L1MD 27 **** 99.0 Highly correlated
52 L1ME2 27 * 99.0 Highly correlated
53 L1M2 26 * 99.0 Highly correlated
54 L1MB8 26 n.s 99.0 Highly correlated
55 MIR3 26 n.s 99.0 Highly correlated
56 L1MB3 25 n.s 99.0 Highly correlated
57 L1MEi 24 **** 99.0 Highly correlated
58 L1ME4a 23 n.s 99.0 Highly correlated
59 L1PA5 23 n.s 19.6 Weakly correlated
60 L2 23 n.s 99.0 Highly correlated
61 L1MA4 22 n.s 87.0 Weakly correlated
62 L1MD2 22 n.s 99.0 Highly correlated
63 L1ME4b 22 n.s 99.0 Highly correlated
64 L1PA16 22 n.s 74.0 Weakly correlated
65 L1MA9 21 n.s 99.0 Highly correlated
66 L1ME3G 21 * 99.0 Highly correlated
67 L1MD1 20 * 99.0 Highly correlated
68 MER4-int 20 **** 74.0 Weakly correlated
69 L1M4b 19 *** 99.0 Highly correlated
70 L1PA6 19 n.s 28.9 Weakly correlated
71 AluYf1 18 **** 19.6 Weakly correlated
72 L1M4c 18 **** 99.0 Highly correlated
73 L1MC5 18 n.s 99.0 Highly correlated
74 AluYk4 17 **** 15.2 Weakly correlated
75 L1M1 17 n.s 74.0 Weakly correlated
76 L1MB5 17 n.s 99.0 Highly correlated
77 L1MC3 16 n.s 99.0 Highly correlated
78 L1PREC2 16 n.s 43.0 Weakly correlated
79 L3 16 n.s 99.0 Highly correlated
80 FRAM 15 **** 74.0 Weakly correlated
81 L1MB4 15 n.s 99.0 Highly correlated
82 L1ME3A 15 n.s 99.0 Highly correlated
83 MLT1D 15 n.s 99.0 Highly correlated
84 L1MA8 14 n.s 87.0 Weakly correlated
85 L1MB2 14 n.s 99.0 Highly correlated
86 L1P3 14 * 74.0 Weakly correlated
87 Alu 13 **** 74.0 Weakly correlated
88 AluYk2 13 **** 19.6 Weakly correlated
89 L1M4a1 13 **** 99.0 Highly correlated
90 L1MA3 13 n.s 74.0 Weakly correlated
91 L1MC 13 * 99.0 Highly correlated
92 L1MC4a 13 n.s 99.0 Highly correlated
93 L1MC5a 13 n.s 99.0 Highly correlated
94 L1ME3B 13 n.s 99.0 Highly correlated
95 L1PA15 13 n.s 74.0 Weakly correlated
96 L1PB4 13 n.s 99.0 Highly correlated
97 AluYa5 12 *** 15.2 Weakly correlated
98 L1M3 12 n.s 99.0 Highly correlated
99 L1MA4A 12 n.s 87.0 Weakly correlated
100 L1MB1 12 n.s 99.0 Highly correlated
101 L1MC2 12 n.s 99.0 Highly correlated
102 L1ME3 12 n.s 99.0 Highly correlated
103 L1PA17 12 n.s 74.0 Weakly correlated
104 L1MA5 11 n.s 87.0 Weakly correlated
105 L1MA5A 11 * 87.0 Weakly correlated
106 L1ME3Cz 11 n.s 99.0 Highly correlated
107 L1PA10 11 n.s 74.0 Weakly correlated
108 THE1B 11 n.s 43.0 Weakly correlated
109 AluSq4 10 **** 74.0 Weakly correlated
110 AluYb8 10 **** 15.2 Weakly correlated
111 AluYe5 10 **** 74.0 Weakly correlated
112 L1M6 10 * 99.0 Highly correlated
113 L1MA2 10 n.s 74.0 Weakly correlated
114 L1PA4 10 n.s 19.6 Weakly correlated
115 MER50 10 *** 43.0 Weakly correlated
116 MLT1A0 10 n.s 99.0 Highly correlated
117 AluYk3 9 **** 19.6 Weakly correlated
118 L1M4a2 9 *** 99.0 Highly correlated
119 L1M7 9 ** 99.0 Highly correlated
120 L1ME2z 9 n.s 99.0 Highly correlated
121 L1PB3 9 n.s 74.0 Weakly correlated
122 MLT1K 9 n.s 99.0 Highly correlated
123 MLT1L 9 n.s 99.0 Highly correlated
124 L1MA7 8 n.s 87.0 Weakly correlated
125 L1MCc 8 * 99.0 Highly correlated
126 MLT1J 8 n.s 99.0 Highly correlated
127 L1MA6 7 n.s 87.0 Weakly correlated
128 L1ME3C 7 * 99.0 Highly correlated
129 L1ME3D 7 n.s 99.0 Highly correlated
130 L1PA11 7 n.s 74.0 Weakly correlated
131 L1PA8 7 n.s 74.0 Weakly correlated
132 L1PB 7 * 74.0 Weakly correlated
133 MSTA 7 n.s 43.0 Weakly correlated
134 SVA_D 7 n.s 15.2 Weakly correlated
135 AluSq10 6 *** 74.0 Weakly correlated
136 AluYk11 6 **** 15.2 Weakly correlated
137 ERVL-E-int 6 n.s 99.0 Highly correlated
138 Harlequin-int 6 * 74.0 Weakly correlated
139 L1MCb 6 n.s 99.0 Highly correlated
140 L1MEb 6 ** 99.0 Highly correlated
141 L1PA15-16 6 n.s 74.0 Weakly correlated
142 L1PA8A 6 n.s 74.0 Weakly correlated
143 L1PB2 6 n.s 74.0 Weakly correlated
144 LTR12C 6 n.s 19.6 Weakly correlated
145 LTR19A 6 **** 43.0 Weakly correlated
146 MLT1E1A 6 n.s 99.0 Highly correlated
147 HAL1M8 5 n.s 99.0 Highly correlated
148 HAL1b 5 n.s 99.0 Highly correlated
149 L1MA1 5 n.s 74.0 Weakly correlated
150 L1MD3 5 n.s 99.0 Highly correlated
151 L1PA13 5 n.s 74.0 Weakly correlated
152 L1PBa1 5 * 74.0 Weakly correlated
153 L3b 5 n.s 99.0 Highly correlated
154 L4_A_Mam 5 n.s 99.0 Highly correlated
155 LTR12F 5 *** 28.9 Weakly correlated
156 LTR33 5 n.s 99.0 Highly correlated
157 MER21C 5 n.s 99.0 Highly correlated
158 MLT1C 5 n.s 94.0 Weakly correlated
159 AluYa8 4 **** 15.2 Weakly correlated
160 AluYc3 4 *** 74.0 Weakly correlated
161 AluYd8 4 **** 15.2 Weakly correlated
162 AluYe6 4 **** 74.0 Weakly correlated
163 ERVL-B4-int 4 n.s 99.0 Highly correlated
164 FAM 4 n.s 87.0 Weakly correlated
165 L1HS 4 n.s 8.6 Weakly correlated
166 L1M3c 4 * 99.0 Highly correlated
167 L1MDb 4 * 99.0 Highly correlated
168 L1ME3F 4 n.s 99.0 Highly correlated
169 L1ME4c 4 n.s 99.0 Highly correlated
170 L1P1 4 n.s 19.6 Weakly correlated
171 L1P4 4 n.s 74.0 Weakly correlated
172 L1PA14 4 n.s 74.0 Weakly correlated
173 L1PBa 4 n.s 74.0 Weakly correlated
174 LTR10A 4 **** 28.9 Weakly correlated
175 LTR23 4 *** 74.0 Weakly correlated
176 LTR49-int 4 n.s 74.0 Weakly correlated
177 LTR50 4 n.s 99.0 Highly correlated
178 MER11A 4 n.s 28.9 Weakly correlated
179 MER21B 4 n.s 99.0 Highly correlated
180 MER4B-int 4 n.s 99.0 Highly correlated
181 MER57A-int 4 n.s 43.0 Weakly correlated
182 MER65A 4 * 74.0 Weakly correlated
183 MER67C 4 * 99.0 Highly correlated
184 MLT1J-int 4 * 99.0 Highly correlated
185 MLT1N2 4 n.s 99.0 Highly correlated
186 MSTB1 4 n.s 74.0 Weakly correlated
187 AluYh3a3 3 *** 15.2 Weakly correlated
188 CR1_Mam 3 * 99.0 Highly correlated
189 HERVE_a-int 3 * 28.9 Weakly correlated
190 HERVK-int 3 n.s 28.9 Weakly correlated
191 HERVK13-int 3 *** 19.6 Weakly correlated
192 HERVL-int 3 n.s 74.0 Weakly correlated
193 L1M2c 3 * 87.0 Weakly correlated
194 L1M3f 3 n.s 87.0 Weakly correlated
195 L1MA10 3 n.s 99.0 Highly correlated
196 L1MEa 3 ** 99.0 Highly correlated
197 L1P2 3 n.s 28.9 Weakly correlated
198 L1P4a 3 n.s 74.0 Weakly correlated
199 L1PA12 3 n.s 74.0 Weakly correlated
200 L4_C_Mam 3 n.s 99.0 Highly correlated
201 LOR1-int 3 n.s 74.0 Weakly correlated
202 LTR13 3 n.s 19.6 Weakly correlated
203 LTR71B 3 *** 43.0 Weakly correlated
204 LTR8 3 n.s 43.0 Weakly correlated
205 LTR8A 3 n.s 43.0 Weakly correlated
206 LTR8B 3 n.s 43.0 Weakly correlated
207 MER41A 3 n.s 74.0 Weakly correlated
208 MER41B 3 n.s 74.0 Weakly correlated
209 MER51A 3 * 43.0 Weakly correlated
210 MER52A 3 n.s 74.0 Weakly correlated
211 MER68-int 3 ** 99.0 Highly correlated
212 MER77 3 n.s 99.0 Highly correlated
213 MER83 3 ** 43.0 Weakly correlated
214 MER90a 3 * 99.0 Highly correlated
215 MLT1B 3 n.s 99.0 Highly correlated
216 MLT1G1 3 n.s 99.0 Highly correlated
217 MLT1H 3 n.s 99.0 Highly correlated
218 MLT1O 3 n.s 99.0 Highly correlated
219 MLT2D 3 n.s 99.0 Highly correlated
220 MSTB 3 n.s 43.0 Weakly correlated
221 MSTB-int 3 n.s 43.0 Weakly correlated
222 MamRTE1 3 n.s 99.0 Highly correlated
223 MamSINE1 3 n.s 99.0 Highly correlated
224 SVA_A 3 * 19.6 Weakly correlated
225 THE1D 3 n.s 43.0 Weakly correlated
226 THE1D-int 3 n.s 28.9 Weakly correlated
227 AluYb9 2 ** 15.2 Weakly correlated
228 AluYg6 2 * 15.2 Weakly correlated
229 AluYi6 2 ** 15.2 Weakly correlated
230 AmnSINE1 2 n.s 319.0 Weakly correlated
231 ERVL-int 2 n.s 99.0 Highly correlated
232 HERV15-int 2 * 28.9 Weakly correlated
233 HERV17-int 2 n.s 28.9 Weakly correlated
234 HERV35I-int 2 n.s 43.0 Weakly correlated
235 HERVIP10FH-int 2 n.s 28.9 Weakly correlated
236 HERVS71-int 2 n.s 28.9 Weakly correlated
237 HUERS-P2-int 2 * 43.0 Weakly correlated
238 L1M2a 2 n.s 87.0 Weakly correlated
239 L1ME3E 2 n.s 99.0 Highly correlated
240 L1ME5 2 n.s 99.0 Highly correlated
241 L1MEg1 2 n.s 99.0 Highly correlated
242 L1MEh 2 n.s 99.0 Highly correlated
243 L2-3_Crp 2 n.s 431.0 Weakly correlated
244 L4_B_Mam 2 n.s 99.0 Highly correlated
245 LTR16E2 2 n.s 99.0 Highly correlated
246 LTR25-int 2 n.s 43.0 Weakly correlated
247 LTR27C 2 ** 43.0 Weakly correlated
248 LTR52 2 n.s 99.0 Highly correlated
249 LTR54B 2 * 74.0 Weakly correlated
250 LTR68 2 ** 99.0 Highly correlated
251 LTR7 2 n.s 19.6 Weakly correlated
252 LTR84b 2 n.s 99.0 Highly correlated
253 LTR9B 2 n.s 43.0 Weakly correlated
254 MER31A 2 n.s 87.0 Weakly correlated
255 MER41-int 2 n.s 74.0 Weakly correlated
256 MER4A 2 n.s 74.0 Weakly correlated
257 MER4B 2 n.s 74.0 Weakly correlated
258 MER4C 2 * 74.0 Weakly correlated
259 MER4D 2 n.s 74.0 Weakly correlated
260 MER50-int 2 n.s 43.0 Weakly correlated
261 MER51C 2 ** 43.0 Weakly correlated
262 MER57B1 2 n.s 43.0 Weakly correlated
263 MER61A 2 * 43.0 Weakly correlated
264 MER61F 2 ** 43.0 Weakly correlated
265 MER65-int 2 n.s 87.0 Weakly correlated
266 MER65C 2 * 74.0 Weakly correlated
267 MER66-int 2 n.s 43.0 Weakly correlated
268 MER66B 2 n.s 43.0 Weakly correlated
269 MER66C 2 * 43.0 Weakly correlated
270 MER68 2 n.s 99.0 Highly correlated
271 MLT1A 2 n.s 99.0 Highly correlated
272 MLT1E 2 n.s 99.0 Highly correlated
273 MLT1E2 2 n.s 99.0 Highly correlated
274 MLT1E3 2 n.s 99.0 Highly correlated
275 MLT1F-int 2 * 99.0 Highly correlated
276 MLT1F1 2 n.s 99.0 Highly correlated
277 MLT1F2 2 n.s 99.0 Highly correlated
278 MLT1G 2 n.s 99.0 Highly correlated
279 MLT1G3-int 2 ** 99.0 Highly correlated
280 MLT1M 2 n.s 99.0 Highly correlated
281 MLT2B3 2 n.s 99.0 Highly correlated
282 MLT2B4 2 n.s 99.0 Highly correlated
283 MLT2F 2 n.s 99.0 Highly correlated
284 MSTB1-int 2 * 74.0 Weakly correlated
285 MSTC 2 n.s 74.0 Weakly correlated
286 MSTD 2 n.s 74.0 Weakly correlated
287 PABL_A 2 * 43.0 Weakly correlated
288 PRIMA41-int 2 n.s 74.0 Weakly correlated
289 SVA_B 2 n.s 15.2 Weakly correlated
290 SVA_C 2 n.s 15.2 Weakly correlated
291 SVA_F 2 n.s 0.0 Weakly correlated
292 UCON86 2 **** 319.0 Weakly correlated
293 AluYh7 1 ** 0.0 Weakly correlated
294 CR1-3_Croc 1 n.s 319.0 Weakly correlated
295 ERV3-16A3_I-int 1 n.s 99.0 Highly correlated
296 ERV3-16A3_LTR 1 n.s 99.0 Highly correlated
297 HERV16-int 1 n.s 99.0 Highly correlated
298 HERV3-int 1 n.s 28.9 Weakly correlated
299 HERV4_I-int 1 n.s 43.0 Weakly correlated
300 HERVIP10F-int 1 n.s 28.9 Weakly correlated
301 HERVL40-int 1 n.s 99.0 Highly correlated
302 HERVL74-int 1 n.s 99.0 Highly correlated
303 HERVP71A-int 1 n.s 43.0 Weakly correlated
304 HUERS-P3-int 1 n.s 43.0 Weakly correlated
305 L1M2b 1 n.s 87.0 Weakly correlated
306 L1M3de 1 n.s 99.0 Highly correlated
307 L1M3e 1 n.s 99.0 Highly correlated
308 L1MEj 1 n.s 99.0 Highly correlated
309 L1PBb 1 n.s 74.0 Weakly correlated
310 L2-1_AMi 1 n.s 319.0 Weakly correlated
311 LFSINE_Vert 1 n.s 319.0 Weakly correlated
312 LOR1a 1 n.s 74.0 Weakly correlated
313 LOR1b 1 n.s 74.0 Weakly correlated
314 LTR103b_Mam 1 * 99.0 Highly correlated
315 LTR12_ 1 n.s 28.9 Weakly correlated
316 LTR13_ 1 ** 28.9 Weakly correlated
317 LTR16 1 n.s 99.0 Highly correlated
318 LTR16A1 1 n.s 99.0 Highly correlated
319 LTR16A2 1 n.s 99.0 Highly correlated
320 LTR16B 1 n.s 99.0 Highly correlated
321 LTR16B2 1 n.s 99.0 Highly correlated
322 LTR16C 1 n.s 99.0 Highly correlated
323 LTR16D 1 n.s 99.0 Highly correlated
324 LTR18A 1 * 43.0 Weakly correlated
325 LTR1A1 1 n.s 43.0 Weakly correlated
326 LTR1A2 1 n.s 43.0 Weakly correlated
327 LTR22A 1 * 43.0 Weakly correlated
328 LTR24C 1 n.s 74.0 Weakly correlated
329 LTR25 1 n.s 43.0 Weakly correlated
330 LTR26C 1 * 0.0 Weakly correlated
331 LTR27 1 * 43.0 Weakly correlated
332 LTR27B 1 * 43.0 Weakly correlated
333 LTR27E 1 n.s 43.0 Weakly correlated
334 LTR2C 1 * 19.6 Weakly correlated
335 LTR31 1 * 74.0 Weakly correlated
336 LTR32 1 n.s 43.0 Weakly correlated
337 LTR33A 1 n.s 99.0 Highly correlated
338 LTR34 1 * 74.0 Weakly correlated
339 LTR37-int 1 n.s 99.0 Highly correlated
340 LTR37B 1 n.s 99.0 Highly correlated
341 LTR38-int 1 ** 74.0 Weakly correlated
342 LTR3B_ 1 * 28.9 Weakly correlated
343 LTR4 1 * 28.9 Weakly correlated
344 LTR40a 1 n.s 99.0 Highly correlated
345 LTR41 1 n.s 99.0 Highly correlated
346 LTR44 1 * 74.0 Weakly correlated
347 LTR46 1 * 43.0 Weakly correlated
348 LTR48 1 n.s 74.0 Weakly correlated
349 LTR56 1 n.s 74.0 Weakly correlated
350 LTR57 1 * 74.0 Weakly correlated
351 LTR67B 1 n.s 99.0 Highly correlated
352 LTR75 1 * 99.0 Highly correlated
353 LTR78 1 n.s 99.0 Highly correlated
354 LTR78B 1 n.s 99.0 Highly correlated
355 LTR7B 1 n.s 28.9 Weakly correlated
356 LTR81A 1 n.s 99.0 Highly correlated
357 LTR82A 1 n.s 99.0 Highly correlated
358 LTR83 1 n.s 99.0 Highly correlated
359 LTR85c 1 n.s 99.0 Highly correlated
360 LTR86B2 1 * 99.0 Highly correlated
361 LTR89 1 n.s 99.0 Highly correlated
362 LTR9D 1 n.s 43.0 Weakly correlated
363 MER101 1 * 74.0 Weakly correlated
364 MER101-int 1 n.s 74.0 Weakly correlated
365 MER110 1 n.s 99.0 Highly correlated
366 MER110A 1 n.s 99.0 Highly correlated
367 MER11B 1 n.s 19.6 Weakly correlated
368 MER11C 1 n.s 19.6 Weakly correlated
369 MER21A 1 n.s 74.0 Weakly correlated
370 MER31-int 1 n.s 99.0 Highly correlated
371 MER34C2 1 n.s 74.0 Weakly correlated
372 MER39 1 n.s 74.0 Weakly correlated
373 MER39B 1 n.s 74.0 Weakly correlated
374 MER41E 1 n.s 74.0 Weakly correlated
375 MER48 1 * 28.9 Weakly correlated
376 MER49 1 n.s 43.0 Weakly correlated
377 MER4D1 1 n.s 74.0 Weakly correlated
378 MER4E 1 n.s 74.0 Weakly correlated
379 MER50B 1 n.s 43.0 Weakly correlated
380 MER50C 1 ** 43.0 Weakly correlated
381 MER51-int 1 n.s 43.0 Weakly correlated
382 MER51B 1 n.s 43.0 Weakly correlated
383 MER51D 1 ** 43.0 Weakly correlated
384 MER52D 1 n.s 74.0 Weakly correlated
385 MER57A1 1 n.s 43.0 Weakly correlated
386 MER57C2 1 n.s 87.0 Weakly correlated
387 MER57F 1 n.s 74.0 Weakly correlated
388 MER61-int 1 n.s 43.0 Weakly correlated
389 MER61E 1 n.s 43.0 Weakly correlated
390 MER65D 1 n.s 87.0 Weakly correlated
391 MER66A 1 n.s 43.0 Weakly correlated
392 MER67A 1 n.s 99.0 Highly correlated
393 MER67B 1 n.s 99.0 Highly correlated
394 MER67D 1 n.s 99.0 Highly correlated
395 MER68B 1 n.s 99.0 Highly correlated
396 MER70-int 1 n.s 99.0 Highly correlated
397 MER89 1 n.s 99.0 Highly correlated
398 MER89-int 1 n.s 99.0 Highly correlated
399 MER9a3 1 n.s 28.9 Weakly correlated
400 MIR1_Amn 1 n.s 319.0 Weakly correlated
401 MLT-int 1 n.s 99.0 Highly correlated
402 MLT1A1 1 n.s 87.0 Weakly correlated
403 MLT1B-int 1 n.s 99.0 Highly correlated
404 MLT1F 1 n.s 99.0 Highly correlated
405 MLT1F1-int 1 * 99.0 Highly correlated
406 MLT1F2-int 1 n.s 99.0 Highly correlated
407 MLT1H1 1 n.s 99.0 Highly correlated
408 MLT1H2 1 n.s 99.0 Highly correlated
409 MLT1I 1 n.s 99.0 Highly correlated
410 MLT1J2 1 n.s 99.0 Highly correlated
411 MLT1J2-int 1 n.s 99.0 Highly correlated
412 MLT2A2 1 n.s 74.0 Weakly correlated
413 MLT2C1 1 n.s 99.0 Highly correlated
414 MLT2C2 1 n.s 99.0 Highly correlated
415 MSTA-int 1 n.s 43.0 Weakly correlated
416 MamGypLTR2b 1 n.s 99.0 Highly correlated
417 MamGypLTR3 1 n.s 99.0 Highly correlated
418 MamGypLTR3a 1 n.s 99.0 Highly correlated
419 MamGypsy2-I 1 n.s 99.0 Highly correlated
420 MamGypsy2-LTR 1 * 99.0 Highly correlated
421 MamRep605 1 n.s 99.0 Highly correlated
422 PABL_A-int 1 n.s 74.0 Weakly correlated
423 PRIMA4-int 1 n.s 74.0 Weakly correlated
424 SVA_E 1 n.s 0.0 Weakly correlated
425 THE1A 1 n.s 43.0 Weakly correlated
426 THE1A-int 1 n.s 43.0 Weakly correlated
427 THE1B-int 1 n.s 43.0 Weakly correlated
428 THE1C 1 n.s 43.0 Weakly correlated
429 THE1C-int 1 n.s 43.0 Weakly correlated
430 X7B_LINE 1 * 319.0 Weakly correlated
431 X7C_LINE 1 * 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluY 816 **** 74.0 Weakly correlated
2 AluSx1 466 **** 74.0 Weakly correlated
3 AluJb 417 **** 74.0 Weakly correlated
4 AluSx 400 **** 74.0 Weakly correlated
5 AluSz 366 **** 74.0 Weakly correlated
6 AluSq2 237 **** 74.0 Weakly correlated
7 AluSp 205 **** 74.0 Weakly correlated
8 AluSc 180 **** 74.0 Weakly correlated
9 AluJo 169 **** 74.0 Weakly correlated
10 AluJr 165 **** 74.0 Weakly correlated
11 AluSx3 152 **** 74.0 Weakly correlated
12 AluSg 152 **** 74.0 Weakly correlated
13 AluSz6 135 **** 74.0 Weakly correlated
14 AluSc8 106 **** 74.0 Weakly correlated
15 FLAM_C 79 **** 74.0 Weakly correlated
16 AluSq 76 **** 74.0 Weakly correlated
17 AluSx4 62 **** 74.0 Weakly correlated
18 AluSg7 58 **** 74.0 Weakly correlated
19 AluYc 41 **** 74.0 Weakly correlated
20 AluJr4 40 **** 74.0 Weakly correlated
21 FLAM_A 32 **** 74.0 Weakly correlated
22 AluYm1 28 **** 19.6 Weakly correlated
23 AluYj4 26 **** 0.0 Weakly correlated
24 AluSc5 26 **** 74.0 Weakly correlated
25 AluYh3 26 **** 15.2 Weakly correlated
26 AluSg4 24 **** 74.0 Weakly correlated
27 AluYf1 18 **** 19.6 Weakly correlated
28 AluYk4 17 **** 15.2 Weakly correlated
29 FRAM 12 **** 74.0 Weakly correlated
30 AluYk2 11 **** 19.6 Weakly correlated
31 AluYe5 9 **** 74.0 Weakly correlated
32 AluYa5 9 ** 15.2 Weakly correlated
33 AluYk3 9 **** 19.6 Weakly correlated
34 AluSq4 8 **** 74.0 Weakly correlated
35 Alu 8 **** 74.0 Weakly correlated
36 L2a 7 n.s 99.0 Highly correlated
37 AluYb8 7 ** 15.2 Weakly correlated
38 AluSq10 6 *** 74.0 Weakly correlated
39 AluYd8 4 **** 15.2 Weakly correlated
40 AluYe6 4 **** 74.0 Weakly correlated
41 FAM 4 n.s 87.0 Weakly correlated
42 MIRb 4 n.s 99.0 Highly correlated
43 AluYc3 4 *** 74.0 Weakly correlated
44 AluYh3a3 3 *** 15.2 Weakly correlated
45 HAL1 3 n.s 99.0 Highly correlated
46 AluYk11 3 *** 15.2 Weakly correlated
47 L1MC4 2 n.s 99.0 Highly correlated
48 L2c 2 n.s 99.0 Highly correlated
49 MIR3 2 n.s 99.0 Highly correlated
50 AluYb9 2 ** 15.2 Weakly correlated
51 L1MEg 2 n.s 99.0 Highly correlated
52 L1MEi 2 n.s 99.0 Highly correlated
53 AluYa8 2 *** 15.2 Weakly correlated
54 AluYg6 2 * 15.2 Weakly correlated
55 L1MEf 2 n.s 99.0 Highly correlated
56 AluYi6 2 ** 15.2 Weakly correlated
57 L3b 2 n.s 99.0 Highly correlated
58 MER4E 1 n.s 74.0 Weakly correlated
59 L1M4b 1 n.s 99.0 Highly correlated
60 SVA_E 1 n.s 0.0 Weakly correlated
61 MLT1L 1 n.s 99.0 Highly correlated
62 MIRc 1 n.s 99.0 Highly correlated
63 MER52D 1 n.s 74.0 Weakly correlated
64 MER50 1 n.s 43.0 Weakly correlated
65 L1MEd 1 n.s 99.0 Highly correlated
66 MLT1F-int 1 n.s 99.0 Highly correlated
67 L1MC5a 1 n.s 99.0 Highly correlated
68 SVA_A 1 n.s 19.6 Weakly correlated
69 L1MC3 1 n.s 99.0 Highly correlated
70 L1MC2 1 n.s 99.0 Highly correlated
71 MLT1E1A 1 n.s 99.0 Highly correlated
72 HERVL-int 1 n.s 74.0 Weakly correlated
73 L1MA6 1 n.s 87.0 Weakly correlated
74 L1MC5 1 n.s 99.0 Highly correlated
75 AluYh7 1 ** 0.0 Weakly correlated
76 L1MC 1 n.s 99.0 Highly correlated
77 MER4B-int 1 n.s 99.0 Highly correlated
78 MER52A 1 n.s 74.0 Weakly correlated
79 MER70-int 1 n.s 99.0 Highly correlated
80 L1PBa 1 n.s 74.0 Weakly correlated
81 LFSINE_Vert 1 n.s 319.0 Weakly correlated
82 LTR12C 1 n.s 19.6 Weakly correlated
83 MER21C 1 n.s 99.0 Highly correlated
84 MER65A 1 n.s 74.0 Weakly correlated
85 L1PREC2 1 n.s 43.0 Weakly correlated
86 MLT1G1 1 n.s 99.0 Highly correlated
87 MSTA 1 n.s 43.0 Weakly correlated
88 L1MA5 1 n.s 87.0 Weakly correlated
89 L1MA9 1 n.s 99.0 Highly correlated
90 L1PB1 1 n.s 74.0 Weakly correlated
91 L2 1 n.s 99.0 Highly correlated
92 LOR1b 1 n.s 74.0 Weakly correlated
93 SVA_B 1 n.s 15.2 Weakly correlated
94 L1ME4a 1 n.s 99.0 Highly correlated
95 L1PA15-16 1 n.s 74.0 Weakly correlated
96 L1MEc 1 n.s 99.0 Highly correlated
97 L1PA10 1 n.s 74.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUJB 74.0 Weakly correlated
2 ALUJO 74.0 Weakly correlated
3 ALUJR 74.0 Weakly correlated
4 ALUJR4 74.0 Weakly correlated
5 ALUSC 74.0 Weakly correlated
6 ALUSC5 74.0 Weakly correlated
7 ALUSC8 74.0 Weakly correlated
8 ALUSG 74.0 Weakly correlated
9 ALUSG4 74.0 Weakly correlated
10 ALUSG7 74.0 Weakly correlated
11 ALUSP 74.0 Weakly correlated
12 ALUSQ 74.0 Weakly correlated
13 ALUSQ10 74.0 Weakly correlated
14 ALUSQ2 74.0 Weakly correlated
15 ALUSQ4 74.0 Weakly correlated
16 ALUSX 74.0 Weakly correlated
17 ALUSX1 74.0 Weakly correlated
18 ALUSX3 74.0 Weakly correlated
19 ALUSX4 74.0 Weakly correlated
20 ALUSZ 74.0 Weakly correlated
21 ALUSZ6 74.0 Weakly correlated
22 ALUY 74.0 Weakly correlated
23 ALUYA5 15.2 Weakly correlated
24 ALUYC 74.0 Weakly correlated
25 ALUYE5 74.0 Weakly correlated
26 ALUYF1 19.6 Weakly correlated
27 ALUYH3 15.2 Weakly correlated
28 ALUYJ4 0.0 Weakly correlated
29 ALUYK2 19.6 Weakly correlated
30 ALUYK3 19.6 Weakly correlated
31 ALUYK4 15.2 Weakly correlated
32 ALUYM1 19.6 Weakly correlated
33 FLAM_A 74.0 Weakly correlated
34 FLAM_C 74.0 Weakly correlated
35 FRAM 74.0 Weakly correlated