ZRdb KZFP & Repeats
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Human_ZNF547

  • Protein
    Zinc finger protein 547
  • Length
    402
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    74.0 Mya
  • Time of Changing in binding specificity
    74.0 Mya
  • Uniprot_ID
    Q8IVP9
  • NCBI_ID
    284306
Sequence:
MAEMNPAQGHVVFEDVAIYFSQEEWGHLDEAQRLLYRDVMLENLALLSSLGCCHGAEDEEAPLEPGVSVGVSQVMAPKPCLSTQNTQPCETCSSLLKDILRLAEHDGTHPEQGLYTCPAHLHQHQKEQIREKLSRGDGGRPTFVKNHRVHMAGKTFLCSECGKAFSHKHKLSDHQKIHTGERTYKCSKCGILFMERSTLNRHQRTHTGERPYECNECGKAFLCKSHLVRHQTIHSGERPYECSECGKLFMWSSTLITHQRVHTGKRPYGCSECGKFFKCNSNLFRHYRIHTGKRSYGCSECGKFFMERSTLSRHQRVHTGERPYECNECGKFFSLKSVLIQHQRVHTGERPYECSECGKAFLTKSHLICHQTVHTAAKQCSECGKFFRYNSTLLRHQKVHTG
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 11..82
2 C2h2 87..109
3 C2h2 156..178
4 C2h2 184..206
5 C2h2 212..234
6 C2h2 240..262
7 C2h2 268..290
8 C2h2 296..318
9 C2h2 324..346
10 C2h2 352..374
11 C2h2 378..400
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 AluSx1 241 **** 74.0 Highly correlated
2 AluSx 223 *** 74.0 Highly correlated
3 AluY 217 *** 74.0 Highly correlated
4 L2a 191 n.s 99.0 Weakly correlated
5 AluJb 179 n.s 74.0 Highly correlated
6 AluSz 174 n.s 74.0 Highly correlated
7 MIRb 153 n.s 99.0 Weakly correlated
8 L2c 136 n.s 99.0 Weakly correlated
9 MSTD-int 134 **** 74.0 Highly correlated
10 AluSq2 119 * 74.0 Highly correlated
11 AluJr 105 n.s 74.0 Highly correlated
12 L2b 105 n.s 99.0 Weakly correlated
13 L2 96 n.s 99.0 Weakly correlated
14 AluSg 92 **** 74.0 Highly correlated
15 AluSp 91 n.s 74.0 Highly correlated
16 MIR 87 n.s 99.0 Weakly correlated
17 AluJo 74 n.s 74.0 Highly correlated
18 MLT1A1-int 72 **** 87.0 Moderately correlated
19 AluSz6 67 n.s 74.0 Highly correlated
20 AluSc 66 * 74.0 Highly correlated
21 MIR3 64 n.s 99.0 Weakly correlated
22 MIRc 64 n.s 99.0 Weakly correlated
23 L1MC4 56 n.s 99.0 Weakly correlated
24 AluSc8 55 *** 74.0 Highly correlated
25 AluSx3 55 n.s 74.0 Highly correlated
26 AluSq 42 * 74.0 Highly correlated
27 LTR8 37 **** 43.0 Weakly correlated
28 MER11A 37 **** 28.9 Weakly correlated
29 L1PB1 36 n.s 74.0 Highly correlated
30 LTR18A 33 **** 43.0 Weakly correlated
31 LTR76 33 **** 74.0 Highly correlated
32 MER4-int 32 **** 74.0 Highly correlated
33 MSTC-int 31 **** 74.0 Highly correlated
34 MSTB-int 29 **** 43.0 Weakly correlated
35 L1MEc 27 n.s 99.0 Weakly correlated
36 L1PA17 25 * 74.0 Highly correlated
37 L1PA2 25 n.s 15.2 Weakly correlated
38 L1MEg 24 n.s 99.0 Weakly correlated
39 L1PA11 24 n.s 74.0 Highly correlated
40 LTR10A 24 **** 28.9 Weakly correlated
41 HAL1 23 n.s 99.0 Weakly correlated
42 MLT1B 23 n.s 99.0 Weakly correlated
43 AluYj4 22 **** 0.0 Weakly correlated
44 L1PA6 22 n.s 28.9 Weakly correlated
45 L1M5 21 n.s 99.0 Weakly correlated
46 L1MB3 20 n.s 99.0 Weakly correlated
47 L1ME4b 20 n.s 99.0 Weakly correlated
48 L1PA5 20 n.s 19.6 Weakly correlated
49 L1M1 19 n.s 74.0 Highly correlated
50 L3 19 n.s 99.0 Weakly correlated
51 MSTA-int 19 n.s 43.0 Weakly correlated
52 L1M2 18 n.s 99.0 Weakly correlated
53 L1MEd 18 n.s 99.0 Weakly correlated
54 L1PA13 18 n.s 74.0 Highly correlated
55 L1PA3 18 n.s 19.6 Weakly correlated
56 L1PA4 18 n.s 19.6 Weakly correlated
57 MLT1A0-int 18 **** 99.0 Weakly correlated
58 MER52A 17 ** 74.0 Highly correlated
59 MIR1_Amn 17 **** 319.0 Weakly correlated
60 PRIMA4-int 17 **** 74.0 Highly correlated
61 AluSc5 16 * 74.0 Highly correlated
62 AluSx4 16 n.s 74.0 Highly correlated
63 FLAM_C 16 n.s 74.0 Highly correlated
64 HERVIP10B3-int 16 **** 28.9 Weakly correlated
65 L1M4 16 n.s 99.0 Weakly correlated
66 L1MEf 16 n.s 99.0 Weakly correlated
67 L1PA16 16 n.s 74.0 Highly correlated
68 MER57-int 16 **** 87.0 Moderately correlated
69 MLT1K 16 n.s 99.0 Weakly correlated
70 MLT2D 16 *** 99.0 Weakly correlated
71 AluJr4 15 n.s 74.0 Highly correlated
72 L1MC5 15 n.s 99.0 Weakly correlated
73 L1ME1 15 n.s 99.0 Weakly correlated
74 LTR8B 15 **** 43.0 Weakly correlated
75 MLT1H 15 n.s 99.0 Weakly correlated
76 PABL_A-int 15 **** 74.0 Highly correlated
77 THE1D-int 15 n.s 28.9 Weakly correlated
78 AluSg7 14 n.s 74.0 Highly correlated
79 MLT-int 14 **** 99.0 Weakly correlated
80 FLAM_A 13 n.s 74.0 Highly correlated
81 L1M4b 13 n.s 99.0 Weakly correlated
82 L1ME3Cz 13 n.s 99.0 Weakly correlated
83 L1PA10 13 n.s 74.0 Highly correlated
84 L1PA14 13 n.s 74.0 Highly correlated
85 LOR1-int 13 **** 74.0 Highly correlated
86 Alu 12 **** 74.0 Highly correlated
87 LTR18B 12 **** 43.0 Weakly correlated
88 LTR54 12 **** 74.0 Highly correlated
89 MER41-int 12 * 74.0 Highly correlated
90 MLT1J 12 n.s 99.0 Weakly correlated
91 MST-int 12 **** 74.0 Highly correlated
92 MamRTE1 12 * 99.0 Weakly correlated
93 AluSg4 11 n.s 74.0 Highly correlated
94 AluYa5 11 * 15.2 Weakly correlated
95 FRAM 11 * 74.0 Highly correlated
96 L1MA8 11 n.s 87.0 Moderately correlated
97 L1MB8 11 n.s 99.0 Weakly correlated
98 L1MC5a 11 n.s 99.0 Weakly correlated
99 L1MD 11 n.s 99.0 Weakly correlated
100 L1MDa 11 n.s 99.0 Weakly correlated
101 L1ME3 11 n.s 99.0 Weakly correlated
102 LTR67B 11 *** 99.0 Weakly correlated
103 MER50 11 * 43.0 Weakly correlated
104 MER50-int 11 **** 43.0 Weakly correlated
105 AluYm1 10 n.s 19.6 Weakly correlated
106 HUERS-P3-int 10 *** 43.0 Weakly correlated
107 L1M4c 10 n.s 99.0 Weakly correlated
108 L1MA4 10 n.s 87.0 Moderately correlated
109 L1MB7 10 n.s 99.0 Weakly correlated
110 L1MC 10 n.s 99.0 Weakly correlated
111 L1ME3A 10 n.s 99.0 Weakly correlated
112 L1P4a 10 *** 74.0 Highly correlated
113 LTR10F 10 **** 28.9 Weakly correlated
114 LTR13 10 **** 19.6 Weakly correlated
115 LTR19B 10 **** 43.0 Weakly correlated
116 MLT1D 10 n.s 99.0 Weakly correlated
117 MLT1I 10 n.s 99.0 Weakly correlated
118 HERV4_I-int 9 **** 43.0 Weakly correlated
119 L1MB4 9 n.s 99.0 Weakly correlated
120 LTR12C 9 n.s 19.6 Weakly correlated
121 MER65-int 9 ** 87.0 Moderately correlated
122 MLT1C 9 n.s 94.0 Weakly correlated
123 AluSq4 8 ** 74.0 Highly correlated
124 HERVIP10FH-int 8 *** 28.9 Weakly correlated
125 L1M3f 8 ** 87.0 Moderately correlated
126 L1MA2 8 n.s 74.0 Highly correlated
127 L1MC4a 8 n.s 99.0 Weakly correlated
128 L1MCa 8 n.s 99.0 Weakly correlated
129 L1MD2 8 n.s 99.0 Weakly correlated
130 L1ME2 8 n.s 99.0 Weakly correlated
131 L1ME4a 8 n.s 99.0 Weakly correlated
132 L1P1 8 n.s 19.6 Weakly correlated
133 L1PA7 8 n.s 74.0 Highly correlated
134 LTR18C 8 **** 43.0 Weakly correlated
135 LTR4 8 **** 28.9 Weakly correlated
136 MLT1H2 8 n.s 99.0 Weakly correlated
137 MLT1J2 8 n.s 99.0 Weakly correlated
138 MLT1L 8 n.s 99.0 Weakly correlated
139 MLT1N2 8 n.s 99.0 Weakly correlated
140 MSTB1-int 8 **** 74.0 Highly correlated
141 AluYc 7 n.s 74.0 Highly correlated
142 HAL1ME 7 n.s 99.0 Weakly correlated
143 HERV17-int 7 n.s 28.9 Weakly correlated
144 L1M3b 7 ** 99.0 Weakly correlated
145 L1MA6 7 n.s 87.0 Moderately correlated
146 L1ME3G 7 n.s 99.0 Weakly correlated
147 L1P4 7 n.s 74.0 Highly correlated
148 LTR16C 7 n.s 99.0 Weakly correlated
149 LTR41 7 *** 99.0 Weakly correlated
150 LTR41B 7 **** 99.0 Weakly correlated
151 MLT1A0 7 n.s 99.0 Weakly correlated
152 MLT1F2 7 n.s 99.0 Weakly correlated
153 MSTB1 7 n.s 74.0 Highly correlated
154 MamGypLTR3 7 **** 99.0 Weakly correlated
155 HAL1M8 6 n.s 99.0 Weakly correlated
156 HAL1b 6 n.s 99.0 Weakly correlated
157 HUERS-P3b-int 6 ** 43.0 Weakly correlated
158 L1MA7 6 n.s 87.0 Moderately correlated
159 L1MB5 6 n.s 99.0 Weakly correlated
160 L1ME2z 6 n.s 99.0 Weakly correlated
161 L1PA15-16 6 n.s 74.0 Highly correlated
162 L1PREC2 6 n.s 43.0 Weakly correlated
163 L2-3_Crp 6 ** 431.0 Weakly correlated
164 LTR16A 6 n.s 99.0 Weakly correlated
165 LTR2752 6 *** 43.0 Weakly correlated
166 LTR9 6 ** 43.0 Weakly correlated
167 MER68 6 * 99.0 Weakly correlated
168 MER72B 6 **** 43.0 Weakly correlated
169 MER77 6 * 99.0 Weakly correlated
170 MLT1A 6 n.s 99.0 Weakly correlated
171 MLT1F1 6 n.s 99.0 Weakly correlated
172 MSTB2-int 6 **** 74.0 Highly correlated
173 THE1B-int 6 n.s 43.0 Weakly correlated
174 AluSq10 5 * 74.0 Highly correlated
175 AluYf1 5 n.s 19.6 Weakly correlated
176 AluYh3 5 n.s 15.2 Weakly correlated
177 ERVL-E-int 5 n.s 99.0 Weakly correlated
178 HERV3-int 5 * 28.9 Weakly correlated
179 L1MA4A 5 n.s 87.0 Moderately correlated
180 L1MC1 5 n.s 99.0 Weakly correlated
181 L1P2 5 n.s 28.9 Weakly correlated
182 L1P3 5 n.s 74.0 Highly correlated
183 L4_A_Mam 5 n.s 99.0 Weakly correlated
184 LTR1A2 5 n.s 43.0 Weakly correlated
185 LTR33 5 n.s 99.0 Weakly correlated
186 LTR33C 5 ** 99.0 Weakly correlated
187 LTR39 5 n.s 43.0 Weakly correlated
188 LTR41C 5 *** 99.0 Weakly correlated
189 LTR57-int 5 *** 74.0 Highly correlated
190 MER101-int 5 n.s 74.0 Highly correlated
191 MER21C 5 n.s 99.0 Weakly correlated
192 MER39B 5 * 74.0 Highly correlated
193 MER52-int 5 n.s 99.0 Weakly correlated
194 MER67C 5 n.s 99.0 Weakly correlated
195 MER72 5 ** 43.0 Weakly correlated
196 MLT2B3 5 n.s 99.0 Weakly correlated
197 HERVIP10F-int 4 n.s 28.9 Weakly correlated
198 L1M4a2 4 n.s 99.0 Weakly correlated
199 L1MA5 4 n.s 87.0 Moderately correlated
200 L1MA9 4 n.s 99.0 Weakly correlated
201 L1MB2 4 n.s 99.0 Weakly correlated
202 L1MC2 4 n.s 99.0 Weakly correlated
203 L1PA15 4 n.s 74.0 Highly correlated
204 L1PA8 4 n.s 74.0 Highly correlated
205 L1PB3 4 n.s 74.0 Highly correlated
206 LTR12E 4 *** 19.6 Weakly correlated
207 LTR25-int 4 n.s 43.0 Weakly correlated
208 LTR26C 4 *** 0.0 Weakly correlated
209 LTR27 4 **** 43.0 Weakly correlated
210 LTR49-int 4 n.s 74.0 Highly correlated
211 MER11B 4 n.s 19.6 Weakly correlated
212 MER21-int 4 n.s 99.0 Weakly correlated
213 MER52D 4 n.s 74.0 Highly correlated
214 MER66B 4 n.s 43.0 Weakly correlated
215 MER74A 4 n.s 99.0 Weakly correlated
216 MER83 4 ** 43.0 Weakly correlated
217 MLT1E 4 * 99.0 Weakly correlated
218 MLT1E1A 4 n.s 99.0 Weakly correlated
219 MLT1F 4 n.s 99.0 Weakly correlated
220 MLT1H1 4 n.s 99.0 Weakly correlated
221 MLT2B4 4 n.s 99.0 Weakly correlated
222 MSTB 4 n.s 43.0 Weakly correlated
223 MamSINE1 4 n.s 99.0 Weakly correlated
224 Plat_L3 4 n.s 99.0 Weakly correlated
225 SVA_A 4 n.s 19.6 Weakly correlated
226 THE1C-int 4 n.s 43.0 Weakly correlated
227 AluYa8 3 *** 15.2 Weakly correlated
228 AluYb8 3 n.s 15.2 Weakly correlated
229 AluYe5 3 n.s 74.0 Highly correlated
230 AluYk11 3 ** 15.2 Weakly correlated
231 ERV24_Prim-int 3 * 74.0 Highly correlated
232 ERV3-16A3_LTR 3 n.s 99.0 Weakly correlated
233 HERVK11-int 3 n.s 28.9 Weakly correlated
234 HERVL18-int 3 n.s 43.0 Weakly correlated
235 L1HS 3 n.s 8.6 Weakly correlated
236 L1MA1 3 n.s 74.0 Highly correlated
237 L1MD3 3 n.s 99.0 Weakly correlated
238 L1MDb 3 n.s 99.0 Weakly correlated
239 L1ME3B 3 n.s 99.0 Weakly correlated
240 L1ME3D 3 n.s 99.0 Weakly correlated
241 L1ME4c 3 n.s 99.0 Weakly correlated
242 L1MEg2 3 * 99.0 Weakly correlated
243 L1MEh 3 n.s 99.0 Weakly correlated
244 L1MEi 3 n.s 99.0 Weakly correlated
245 L1MEj 3 n.s 99.0 Weakly correlated
246 L1PB 3 n.s 74.0 Highly correlated
247 L4_C_Mam 3 n.s 99.0 Weakly correlated
248 LOR1a 3 n.s 74.0 Highly correlated
249 LTR16B2 3 n.s 99.0 Weakly correlated
250 LTR1D 3 * 43.0 Weakly correlated
251 LTR2 3 n.s 28.9 Weakly correlated
252 LTR37B 3 n.s 99.0 Weakly correlated
253 LTR40b 3 n.s 99.0 Weakly correlated
254 LTR50 3 n.s 99.0 Weakly correlated
255 LTR62 3 ** 74.0 Highly correlated
256 MER11C 3 n.s 19.6 Weakly correlated
257 MER21B 3 n.s 99.0 Weakly correlated
258 MER34D 3 ** 74.0 Highly correlated
259 MER41B 3 n.s 74.0 Highly correlated
260 MER51-int 3 n.s 43.0 Weakly correlated
261 MER61A 3 * 43.0 Weakly correlated
262 MER61C 3 ** 43.0 Weakly correlated
263 MSTA 3 n.s 43.0 Weakly correlated
264 MSTB2 3 n.s 74.0 Highly correlated
265 MamGypLTR1a 3 * 99.0 Weakly correlated
266 MamRep605 3 n.s 99.0 Weakly correlated
267 SVA_E 3 n.s 0.0 Weakly correlated
268 SVA_F 3 n.s 0.0 Weakly correlated
269 THE1C 3 n.s 43.0 Weakly correlated
270 THE1D 3 n.s 43.0 Weakly correlated
271 AluYc3 2 * 74.0 Highly correlated
272 AluYk3 2 n.s 19.6 Weakly correlated
273 AmnSINE1 2 n.s 319.0 Weakly correlated
274 CR1-3_Croc 2 n.s 319.0 Weakly correlated
275 ERV3-16A3_I-int 2 n.s 99.0 Weakly correlated
276 ERVL-B4-int 2 n.s 99.0 Weakly correlated
277 HERVH48-int 2 n.s 28.9 Weakly correlated
278 HERVK-int 2 n.s 28.9 Weakly correlated
279 HERVL74-int 2 n.s 99.0 Weakly correlated
280 L1M3a 2 n.s 99.0 Weakly correlated
281 L1M3c 2 n.s 99.0 Weakly correlated
282 L1M4a1 2 n.s 99.0 Weakly correlated
283 L1MCc 2 n.s 99.0 Weakly correlated
284 L1ME3F 2 n.s 99.0 Weakly correlated
285 L1P4c 2 *** 74.0 Highly correlated
286 L1P4d 2 * 74.0 Highly correlated
287 L1P5 2 * 74.0 Highly correlated
288 L1PA12 2 n.s 74.0 Highly correlated
289 L1PB2 2 n.s 74.0 Highly correlated
290 L1PBa 2 n.s 74.0 Highly correlated
291 LTR102_Mam 2 n.s 99.0 Weakly correlated
292 LTR16A1 2 n.s 99.0 Weakly correlated
293 LTR16E1 2 n.s 99.0 Weakly correlated
294 LTR1E 2 n.s 43.0 Weakly correlated
295 LTR26 2 n.s 74.0 Highly correlated
296 LTR31 2 * 74.0 Highly correlated
297 LTR36 2 n.s 74.0 Highly correlated
298 LTR37-int 2 n.s 99.0 Weakly correlated
299 LTR37A 2 n.s 99.0 Weakly correlated
300 LTR45B 2 * 74.0 Highly correlated
301 LTR53-int 2 n.s 99.0 Weakly correlated
302 LTR55 2 n.s 99.0 Weakly correlated
303 LTR7 2 n.s 19.6 Weakly correlated
304 LTR78B 2 n.s 99.0 Weakly correlated
305 LTR85c 2 n.s 99.0 Weakly correlated
306 MER4CL34 2 n.s 43.0 Weakly correlated
307 MER54B 2 n.s 87.0 Moderately correlated
308 MER61D 2 * 43.0 Weakly correlated
309 MER66A 2 * 43.0 Weakly correlated
310 MER67A 2 * 99.0 Weakly correlated
311 MER9a3 2 n.s 28.9 Weakly correlated
312 MLT1G 2 n.s 99.0 Weakly correlated
313 MLT1J-int 2 n.s 99.0 Weakly correlated
314 MLT2A2 2 n.s 74.0 Highly correlated
315 MLT2C1 2 n.s 99.0 Weakly correlated
316 MSTC 2 n.s 74.0 Highly correlated
317 MamGypLTR3a 2 n.s 99.0 Weakly correlated
318 MamGypsy2-LTR 2 * 99.0 Weakly correlated
319 Mam_R4 2 * 99.0 Weakly correlated
320 PRIMA41-int 2 n.s 74.0 Highly correlated
321 THE1A 2 n.s 43.0 Weakly correlated
322 THE1B 2 n.s 43.0 Weakly correlated
323 X6B_LINE 2 * 99.0 Weakly correlated
324 X9_LINE 2 ** 319.0 Weakly correlated
325 AluYd8 1 * 15.2 Weakly correlated
326 AluYh3a3 1 n.s 15.2 Weakly correlated
327 AluYh9 1 ** 15.2 Weakly correlated
328 AluYk2 1 n.s 19.6 Weakly correlated
329 CR1-L3A_Croc 1 * 319.0 Weakly correlated
330 FAM 1 n.s 87.0 Moderately correlated
331 HERV16-int 1 n.s 99.0 Weakly correlated
332 HERV35I-int 1 n.s 43.0 Weakly correlated
333 HERV9-int 1 n.s 28.9 Weakly correlated
334 HERV9NC-int 1 n.s 19.6 Weakly correlated
335 HERVE-int 1 n.s 19.6 Weakly correlated
336 HERVFH21-int 1 n.s 28.9 Weakly correlated
337 HERVH-int 1 n.s 28.9 Weakly correlated
338 HERVK9-int 1 n.s 28.9 Weakly correlated
339 HUERS-P1-int 1 n.s 43.0 Weakly correlated
340 HUERS-P2-int 1 n.s 43.0 Weakly correlated
341 L1M2b 1 n.s 87.0 Moderately correlated
342 L1M3 1 n.s 99.0 Weakly correlated
343 L1M7 1 n.s 99.0 Weakly correlated
344 L1MB1 1 n.s 99.0 Weakly correlated
345 L1MC3 1 n.s 99.0 Weakly correlated
346 L1PA8A 1 n.s 74.0 Highly correlated
347 L1PB4 1 n.s 99.0 Weakly correlated
348 L1PBa1 1 n.s 74.0 Highly correlated
349 L1PBb 1 n.s 74.0 Highly correlated
350 L2-1_AMi 1 n.s 319.0 Weakly correlated
351 L3b 1 n.s 99.0 Weakly correlated
352 L4_B_Mam 1 n.s 99.0 Weakly correlated
353 LFSINE_Vert 1 n.s 319.0 Weakly correlated
354 LTR1 1 n.s 43.0 Weakly correlated
355 LTR108a_Mam 1 ** 99.0 Weakly correlated
356 LTR10G 1 * 28.9 Weakly correlated
357 LTR13_ 1 * 28.9 Weakly correlated
358 LTR14A 1 * 28.9 Weakly correlated
359 LTR14C 1 n.s 28.9 Weakly correlated
360 LTR16 1 n.s 99.0 Weakly correlated
361 LTR16B 1 n.s 99.0 Weakly correlated
362 LTR16E2 1 n.s 99.0 Weakly correlated
363 LTR19A 1 n.s 43.0 Weakly correlated
364 LTR1F1 1 n.s 43.0 Weakly correlated
365 LTR22A 1 n.s 43.0 Weakly correlated
366 LTR22B 1 n.s 28.9 Weakly correlated
367 LTR24C 1 n.s 74.0 Highly correlated
368 LTR25 1 n.s 43.0 Weakly correlated
369 LTR27B 1 n.s 43.0 Weakly correlated
370 LTR27D 1 n.s 43.0 Weakly correlated
371 LTR27E 1 n.s 43.0 Weakly correlated
372 LTR29 1 n.s 43.0 Weakly correlated
373 LTR33A 1 n.s 99.0 Weakly correlated
374 LTR33A_ 1 n.s 99.0 Weakly correlated
375 LTR40A1 1 n.s 99.0 Weakly correlated
376 LTR43 1 n.s 74.0 Highly correlated
377 LTR48B 1 n.s 74.0 Highly correlated
378 LTR52 1 n.s 99.0 Weakly correlated
379 LTR5_Hs 1 n.s 0.0 Weakly correlated
380 LTR60B 1 n.s 74.0 Highly correlated
381 LTR61 1 n.s 43.0 Weakly correlated
382 LTR64 1 n.s 74.0 Highly correlated
383 LTR65 1 n.s 99.0 Weakly correlated
384 LTR71B 1 n.s 43.0 Weakly correlated
385 LTR75_1 1 * 99.0 Weakly correlated
386 LTR77 1 * 94.0 Weakly correlated
387 LTR78 1 n.s 99.0 Weakly correlated
388 LTR79 1 n.s 99.0 Weakly correlated
389 LTR80B 1 n.s 99.0 Weakly correlated
390 LTR85a 1 n.s 99.0 Weakly correlated
391 LTR88a 1 n.s 99.0 Weakly correlated
392 LTR8A 1 n.s 43.0 Weakly correlated
393 LTR9B 1 n.s 43.0 Weakly correlated
394 MER110 1 n.s 99.0 Weakly correlated
395 MER21A 1 n.s 74.0 Highly correlated
396 MER34C2 1 n.s 74.0 Highly correlated
397 MER34C_ 1 n.s 87.0 Moderately correlated
398 MER41A 1 n.s 74.0 Highly correlated
399 MER41D 1 n.s 74.0 Highly correlated
400 MER4A 1 n.s 74.0 Highly correlated
401 MER4A1 1 n.s 74.0 Highly correlated
402 MER4B-int 1 n.s 99.0 Weakly correlated
403 MER4C 1 n.s 74.0 Highly correlated
404 MER4D 1 n.s 74.0 Highly correlated
405 MER4D0 1 n.s 74.0 Highly correlated
406 MER4D1 1 n.s 74.0 Highly correlated
407 MER4E1 1 n.s 74.0 Highly correlated
408 MER51B 1 n.s 43.0 Weakly correlated
409 MER57A-int 1 n.s 43.0 Weakly correlated
410 MER57B2 1 n.s 43.0 Weakly correlated
411 MER57E3 1 * 74.0 Highly correlated
412 MER57F 1 n.s 74.0 Highly correlated
413 MER65C 1 n.s 74.0 Highly correlated
414 MER66-int 1 n.s 43.0 Weakly correlated
415 MER66C 1 n.s 43.0 Weakly correlated
416 MER68-int 1 n.s 99.0 Weakly correlated
417 MER68B 1 n.s 99.0 Weakly correlated
418 MER74C 1 n.s 99.0 Weakly correlated
419 MER76 1 n.s 99.0 Weakly correlated
420 MER77B 1 n.s 99.0 Weakly correlated
421 MER83A-int 1 n.s 99.0 Weakly correlated
422 MER83B-int 1 n.s 99.0 Weakly correlated
423 MER90 1 n.s 99.0 Weakly correlated
424 MLT1E2-int 1 * 99.0 Weakly correlated
425 MLT1G1 1 n.s 99.0 Weakly correlated
426 MLT1G3 1 n.s 99.0 Weakly correlated
427 MLT1J1 1 n.s 99.0 Weakly correlated
428 MLT1O 1 n.s 99.0 Weakly correlated
429 MLT2B1 1 n.s 99.0 Weakly correlated
430 MLT2F 1 n.s 99.0 Weakly correlated
431 MSTD 1 n.s 74.0 Highly correlated
432 MamGypLTR2b 1 n.s 99.0 Weakly correlated
433 MamGypsy2-I 1 n.s 99.0 Weakly correlated
434 MamRep1151 1 n.s 99.0 Weakly correlated
435 SVA_D 1 n.s 15.2 Weakly correlated
436 THE1A-int 1 n.s 43.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MER4-int 14 n.s 74.0 Highly correlated
2 PRIMA4-int 9 **** 74.0 Highly correlated
3 AluSx1 7 n.s 74.0 Highly correlated
4 L2 6 n.s 99.0 Weakly correlated
5 AluJr4 4 n.s 74.0 Highly correlated
6 AluJo 4 n.s 74.0 Highly correlated
7 L2a 4 n.s 99.0 Weakly correlated
8 MLT1B 4 n.s 99.0 Weakly correlated
9 L2b 4 n.s 99.0 Weakly correlated
10 AluY 3 n.s 74.0 Highly correlated
11 AluSq2 3 n.s 74.0 Highly correlated
12 AluSq 3 n.s 74.0 Highly correlated
13 AluSx 3 n.s 74.0 Highly correlated
14 AluSz6 2 n.s 74.0 Highly correlated
15 MER50-int 2 n.s 43.0 Weakly correlated
16 LTR37A 2 n.s 99.0 Weakly correlated
17 MLT2D 2 n.s 99.0 Weakly correlated
18 HAL1 2 n.s 99.0 Weakly correlated
19 L2c 2 n.s 99.0 Weakly correlated
20 MLT2C1 2 n.s 99.0 Weakly correlated
21 L1MA9 2 n.s 99.0 Weakly correlated
22 MIR 2 n.s 99.0 Weakly correlated
23 MLT1H 2 n.s 99.0 Weakly correlated
24 L1ME1 2 n.s 99.0 Weakly correlated
25 LTR27E 1 n.s 43.0 Weakly correlated
26 L1ME2 1 n.s 99.0 Weakly correlated
27 L1ME2z 1 n.s 99.0 Weakly correlated
28 HERV4_I-int 1 n.s 43.0 Weakly correlated
29 AluSg 1 n.s 74.0 Highly correlated
30 MLT2B4 1 n.s 99.0 Weakly correlated
31 ERVL-E-int 1 n.s 99.0 Weakly correlated
32 L1MA5 1 n.s 87.0 Moderately correlated
33 L1MEf 1 n.s 99.0 Weakly correlated
34 L1MD2 1 n.s 99.0 Weakly correlated
35 HAL1b 1 n.s 99.0 Weakly correlated
36 MER61A 1 n.s 43.0 Weakly correlated
37 MIRc 1 n.s 99.0 Weakly correlated
38 AluJb 1 n.s 74.0 Highly correlated
39 AluJr 1 n.s 74.0 Highly correlated
40 AluSc8 1 n.s 74.0 Highly correlated
41 HERV17-int 1 n.s 28.9 Weakly correlated
42 HERVIP10FH-int 1 n.s 28.9 Weakly correlated
43 MLT2A2 1 n.s 74.0 Highly correlated
44 L1M4 1 n.s 99.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP