ZRdb KZFP & Repeats
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Human_ZNF589

  • Protein
    Zinc finger protein 589
  • Length
    364
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    94.0 Mya
  • Time of Changing in binding specificity
    28.9 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MWAPREQLLGWTAEALPAKDSAWPWEEKPRYLGPVTFEDVAVLFTEAEWKRLSLEQRNLYKEVMLENLRNLVSLAESKPEVHTCPSCPLAFGSQQFLSQDELHNHPIPGFHAGNQLHPGNPCPEDQPQSQHPSDKNHRGAEAEDQRVEGGVRPLFWSTNERGALVGFSSLFQRPPISSWGGNRILEIQLSPAQNASSEEVDRISKRAETPGFGAVTFGECALAFNQKSNLFRQKAVTAEKSSDKRQSQVCRECGRGFSRKSQLIIHQRTHTGEKPYVCGECGRGFIVESVLRNHLSTHSGEKPYVCSHCGRGFSCKPYLIRHQRTHTREKSFMCTVCGRGFREKSELIKHQRIHTGDKPYVCRD
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 35..108
2 C2h2 248..270
3 C2h2 276..298
4 C2h2 304..326
5 C2h2 332..354
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleoplasm
2 Cellular Component nucleus
3 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
4 Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific
5 Molecular Function metal ion binding
6 Molecular Function RNA polymerase II transcription regulatory region sequence-specific DNA binding
7 Biological Process negative regulation of transcription by RNA polymerase II
8 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 1547 **** 99.0 Weakly correlated
2 L2a 1120 **** 99.0 Weakly correlated
3 MIR 976 **** 99.0 Weakly correlated
4 L2c 922 **** 99.0 Weakly correlated
5 MIRc 806 **** 99.0 Weakly correlated
6 MIR3 785 **** 99.0 Weakly correlated
7 MER41B 763 **** 74.0 Weakly correlated
8 L2b 690 **** 99.0 Weakly correlated
9 AluJb 566 n.s 74.0 Weakly correlated
10 L2 442 **** 99.0 Weakly correlated
11 AluSx1 415 n.s 74.0 Weakly correlated
12 AluSx 404 n.s 74.0 Weakly correlated
13 MER41A 390 **** 74.0 Weakly correlated
14 AluJo 375 *** 74.0 Weakly correlated
15 AluJr 360 n.s 74.0 Weakly correlated
16 AluSz 328 n.s 74.0 Weakly correlated
17 L3 281 **** 99.0 Weakly correlated
18 LTR8 238 **** 43.0 Moderately correlated
19 MLT1J 229 **** 99.0 Weakly correlated
20 AluY 226 n.s 74.0 Weakly correlated
21 MLT1K 210 **** 99.0 Weakly correlated
22 MLT1C 185 **** 94.0 Weakly correlated
23 AluSq2 177 n.s 74.0 Weakly correlated
24 L1MB7 157 n.s 99.0 Weakly correlated
25 MIR1_Amn 150 **** 319.0 Weakly correlated
26 AluSz6 148 n.s 74.0 Weakly correlated
27 MLT1L 144 **** 99.0 Weakly correlated
28 AluSx3 136 n.s 74.0 Weakly correlated
29 FLAM_C 134 **** 74.0 Weakly correlated
30 MLT1B 133 **** 99.0 Weakly correlated
31 AluSg 127 n.s 74.0 Weakly correlated
32 MLT1H 123 **** 99.0 Weakly correlated
33 MLT1I 123 **** 99.0 Weakly correlated
34 AluSp 119 n.s 74.0 Weakly correlated
35 AluSc 113 n.s 74.0 Weakly correlated
36 L1M5 112 n.s 99.0 Weakly correlated
37 LTR54 112 **** 74.0 Weakly correlated
38 HAL1 103 n.s 99.0 Weakly correlated
39 L1MC4 102 n.s 99.0 Weakly correlated
40 L3b 99 **** 99.0 Weakly correlated
41 MLT1D 97 n.s 99.0 Weakly correlated
42 AluSq 89 n.s 74.0 Weakly correlated
43 L1ME4a 87 n.s 99.0 Weakly correlated
44 LTR8B 87 **** 43.0 Moderately correlated
45 MamRTE1 86 **** 99.0 Weakly correlated
46 LTR62 85 **** 74.0 Weakly correlated
47 L1MC5a 84 n.s 99.0 Weakly correlated
48 MLT1F 75 **** 99.0 Weakly correlated
49 MLT1J2 73 **** 99.0 Weakly correlated
50 L1ME1 72 n.s 99.0 Weakly correlated
51 L1MB3 70 n.s 99.0 Weakly correlated
52 LTR33 69 **** 99.0 Weakly correlated
53 LTR18B 68 **** 43.0 Moderately correlated
54 MLT1A0 68 n.s 99.0 Weakly correlated
55 MLT1J1 67 **** 99.0 Weakly correlated
56 MSTA 67 n.s 43.0 Moderately correlated
57 LTR9 66 **** 43.0 Moderately correlated
58 MLT1H2 66 **** 99.0 Weakly correlated
59 ERVL-E-int 65 n.s 99.0 Weakly correlated
60 L1MB8 65 n.s 99.0 Weakly correlated
61 MER61E 65 **** 43.0 Moderately correlated
62 MER41-int 64 **** 74.0 Weakly correlated
63 AluSc8 62 n.s 74.0 Weakly correlated
64 L1ME4b 62 n.s 99.0 Weakly correlated
65 AluJr4 61 n.s 74.0 Weakly correlated
66 L1MEg 60 n.s 99.0 Weakly correlated
67 L1MC5 59 n.s 99.0 Weakly correlated
68 MLT1F1 59 **** 99.0 Weakly correlated
69 LTR5_Hs 58 **** 0.0 Weakly correlated
70 MER48 58 **** 28.9 Highly correlated
71 MLT1F2 58 *** 99.0 Weakly correlated
72 MLT1A 57 * 99.0 Weakly correlated
73 L1M4 56 n.s 99.0 Weakly correlated
74 MER41E 55 **** 74.0 Weakly correlated
75 MER50 55 **** 43.0 Moderately correlated
76 ERV3-16A3_I-int 53 n.s 99.0 Weakly correlated
77 LTR15 52 **** 28.9 Highly correlated
78 LTR8A 52 **** 43.0 Moderately correlated
79 MLT1O 52 **** 99.0 Weakly correlated
80 L1ME3A 51 n.s 99.0 Weakly correlated
81 L1ME3G 51 n.s 99.0 Weakly correlated
82 LTR54B 51 **** 74.0 Weakly correlated
83 FRAM 50 **** 74.0 Weakly correlated
84 LTR16C 50 *** 99.0 Weakly correlated
85 L1MC3 48 n.s 99.0 Weakly correlated
86 L1MB4 47 n.s 99.0 Weakly correlated
87 L1MEd 47 n.s 99.0 Weakly correlated
88 LTR47A 47 **** 74.0 Weakly correlated
89 L1MEc 46 n.s 99.0 Weakly correlated
90 MER72 46 **** 43.0 Moderately correlated
91 MER41C 45 **** 74.0 Weakly correlated
92 MLT1N2 45 **** 99.0 Weakly correlated
93 LTR53 44 **** 99.0 Weakly correlated
94 MER49 44 **** 43.0 Moderately correlated
95 AmnSINE1 43 **** 319.0 Weakly correlated
96 MER65A 43 **** 74.0 Weakly correlated
97 L4_A_Mam 42 ** 99.0 Weakly correlated
98 LTR10A 42 **** 28.9 Highly correlated
99 L1ME3Cz 41 n.s 99.0 Weakly correlated
100 LTR13 41 **** 19.6 Weakly correlated
101 LTR13A 41 **** 28.9 Highly correlated
102 LTR50 41 **** 99.0 Weakly correlated
103 THE1B 41 n.s 43.0 Moderately correlated
104 FLAM_A 40 * 74.0 Weakly correlated
105 Plat_L3 40 **** 99.0 Weakly correlated
106 THE1D 40 n.s 43.0 Moderately correlated
107 LTR19B 39 **** 43.0 Moderately correlated
108 LTR2 39 **** 28.9 Highly correlated
109 L1MC4a 38 n.s 99.0 Weakly correlated
110 MER21C 37 n.s 99.0 Weakly correlated
111 MER51A 37 **** 43.0 Moderately correlated
112 MLT1M 36 **** 99.0 Weakly correlated
113 L1PB1 35 n.s 74.0 Weakly correlated
114 MLT1G3 35 **** 99.0 Weakly correlated
115 MLT1H1 35 *** 99.0 Weakly correlated
116 L1MB5 34 n.s 99.0 Weakly correlated
117 LTR78 34 ** 99.0 Weakly correlated
118 AluSx4 33 n.s 74.0 Weakly correlated
119 LTR45C 33 **** 99.0 Weakly correlated
120 LTR46 33 **** 43.0 Moderately correlated
121 LTR67B 33 **** 99.0 Weakly correlated
122 LTR73 33 **** 99.0 Weakly correlated
123 MER21B 33 ** 99.0 Weakly correlated
124 MSTD 33 n.s 74.0 Weakly correlated
125 L1MD2 32 n.s 99.0 Weakly correlated
126 L1MD3 32 n.s 99.0 Weakly correlated
127 L1ME4c 32 n.s 99.0 Weakly correlated
128 MER21A 32 **** 74.0 Weakly correlated
129 MLT2F 32 **** 99.0 Weakly correlated
130 MamSINE1 32 **** 99.0 Weakly correlated
131 L1ME3 31 n.s 99.0 Weakly correlated
132 LTR19C 31 **** 43.0 Moderately correlated
133 AluSg4 30 n.s 74.0 Weakly correlated
134 L1MB2 30 n.s 99.0 Weakly correlated
135 L1PA6 30 n.s 28.9 Highly correlated
136 MER54B 30 **** 87.0 Weakly correlated
137 MER89 30 **** 99.0 Weakly correlated
138 L1ME3B 29 n.s 99.0 Weakly correlated
139 L1PA2 29 n.s 15.2 Weakly correlated
140 L1PA7 29 n.s 74.0 Weakly correlated
141 MER66C 29 **** 43.0 Moderately correlated
142 Alu 28 **** 74.0 Weakly correlated
143 HAL1ME 28 n.s 99.0 Weakly correlated
144 L1ME2 28 n.s 99.0 Weakly correlated
145 L4_C_Mam 28 * 99.0 Weakly correlated
146 MER77B 28 **** 99.0 Weakly correlated
147 MLT1E2 28 n.s 99.0 Weakly correlated
148 L1MA9 27 n.s 99.0 Weakly correlated
149 LFSINE_Vert 27 **** 319.0 Weakly correlated
150 LTR4 27 **** 28.9 Highly correlated
151 LTR41B 27 **** 99.0 Weakly correlated
152 LTR5B 27 **** 28.9 Highly correlated
153 LTR7C 27 **** 28.9 Highly correlated
154 MER39 27 * 74.0 Weakly correlated
155 AluSc5 26 n.s 74.0 Weakly correlated
156 L1M4b 26 n.s 99.0 Weakly correlated
157 LTR41C 26 **** 99.0 Weakly correlated
158 L1MDa 25 n.s 99.0 Weakly correlated
159 L1MEf 25 n.s 99.0 Weakly correlated
160 LTR76 25 **** 74.0 Weakly correlated
161 MER65D 25 **** 87.0 Weakly correlated
162 MLT1G1 25 n.s 99.0 Weakly correlated
163 MLT2D 25 n.s 99.0 Weakly correlated
164 THE1C 25 n.s 43.0 Moderately correlated
165 MER54A 24 **** 87.0 Weakly correlated
166 MLT1E1A 24 n.s 99.0 Weakly correlated
167 LTR33A 23 **** 99.0 Weakly correlated
168 LTR49-int 23 n.s 74.0 Weakly correlated
169 THE1A 23 n.s 43.0 Moderately correlated
170 L1MA4A 22 n.s 87.0 Weakly correlated
171 L1PA13 22 n.s 74.0 Weakly correlated
172 L1PBa 22 n.s 74.0 Weakly correlated
173 LTR16A 22 n.s 99.0 Weakly correlated
174 LTR2C 22 **** 19.6 Weakly correlated
175 LTR6B 22 **** 19.6 Weakly correlated
176 MER4B 22 ** 74.0 Weakly correlated
177 MLT1G 22 * 99.0 Weakly correlated
178 HERVL-int 21 n.s 74.0 Weakly correlated
179 L1MC1 21 n.s 99.0 Weakly correlated
180 L4_B_Mam 21 ** 99.0 Weakly correlated
181 LTR25 21 **** 43.0 Moderately correlated
182 LTR37A 21 **** 99.0 Weakly correlated
183 LTR9D 21 **** 43.0 Moderately correlated
184 MER34 21 **** 87.0 Weakly correlated
185 ERVL-B4-int 20 n.s 99.0 Weakly correlated
186 HERVH-int 20 n.s 28.9 Highly correlated
187 HUERS-P3-int 20 ** 43.0 Moderately correlated
188 L1M6 20 n.s 99.0 Weakly correlated
189 L2-3_Crp 20 **** 431.0 Weakly correlated
190 LTR17 20 *** 28.9 Highly correlated
191 LTR55 20 **** 99.0 Weakly correlated
192 LTR78B 20 ** 99.0 Weakly correlated
193 LTR79 20 * 99.0 Weakly correlated
194 MER4C 20 **** 74.0 Weakly correlated
195 MLT2B4 20 n.s 99.0 Weakly correlated
196 AluSg7 19 n.s 74.0 Weakly correlated
197 L1MA3 19 n.s 74.0 Weakly correlated
198 L1MC 19 n.s 99.0 Weakly correlated
199 L1MD 19 n.s 99.0 Weakly correlated
200 L1MD1 19 n.s 99.0 Weakly correlated
201 L1ME2z 19 n.s 99.0 Weakly correlated
202 L1ME3E 19 n.s 99.0 Weakly correlated
203 L1PA16 19 n.s 74.0 Weakly correlated
204 LTR16E1 19 * 99.0 Weakly correlated
205 LTR18A 19 **** 43.0 Moderately correlated
206 LTR85b 19 **** 99.0 Weakly correlated
207 MER83 19 **** 43.0 Moderately correlated
208 MSTB 19 n.s 43.0 Moderately correlated
209 L1M1 18 n.s 74.0 Weakly correlated
210 L1M4c 18 n.s 99.0 Weakly correlated
211 L1MA8 18 n.s 87.0 Weakly correlated
212 L1MCc 18 n.s 99.0 Weakly correlated
213 LTR21A 18 **** 28.9 Highly correlated
214 LTR52 18 **** 99.0 Weakly correlated
215 LTR6A 18 **** 28.9 Highly correlated
216 MER57A-int 18 n.s 43.0 Moderately correlated
217 MER90a 18 *** 99.0 Weakly correlated
218 AluYc 17 n.s 74.0 Weakly correlated
219 HERVE-int 17 * 19.6 Weakly correlated
220 HERVK-int 17 * 28.9 Highly correlated
221 HERVK22-int 17 * 43.0 Moderately correlated
222 HUERS-P1-int 17 ** 43.0 Moderately correlated
223 L1MCa 17 n.s 99.0 Weakly correlated
224 L1PA3 17 n.s 19.6 Weakly correlated
225 LTR16A1 17 n.s 99.0 Weakly correlated
226 LTR33A_ 17 ** 99.0 Weakly correlated
227 LTR75_1 17 **** 99.0 Weakly correlated
228 MER34A 17 *** 99.0 Weakly correlated
229 MLT1A1 17 n.s 87.0 Weakly correlated
230 CR1-3_Croc 16 **** 319.0 Weakly correlated
231 L1M2 16 n.s 99.0 Weakly correlated
232 L1MA4 16 n.s 87.0 Weakly correlated
233 L1MC2 16 n.s 99.0 Weakly correlated
234 L1PA10 16 n.s 74.0 Weakly correlated
235 LTR12C 16 n.s 19.6 Weakly correlated
236 LTR16 16 n.s 99.0 Weakly correlated
237 LTR16A2 16 ** 99.0 Weakly correlated
238 LTR23 16 **** 74.0 Weakly correlated
239 LTR3 16 **** 28.9 Highly correlated
240 LTR56 16 **** 74.0 Weakly correlated
241 LTR9B 16 **** 43.0 Moderately correlated
242 MER41D 16 **** 74.0 Weakly correlated
243 MER4A1 16 n.s 74.0 Weakly correlated
244 MER57B1 16 **** 43.0 Moderately correlated
245 MER61F 16 **** 43.0 Moderately correlated
246 HAL1b 15 n.s 99.0 Weakly correlated
247 HERV1_LTRc 15 **** 28.9 Highly correlated
248 LTR104_Mam 15 *** 99.0 Weakly correlated
249 LTR19A 15 **** 43.0 Moderately correlated
250 LTR82A 15 *** 99.0 Weakly correlated
251 MER4-int 15 n.s 74.0 Weakly correlated
252 MER68 15 * 99.0 Weakly correlated
253 MER74A 15 n.s 99.0 Weakly correlated
254 MER90 15 **** 99.0 Weakly correlated
255 MLT2B1 15 n.s 99.0 Weakly correlated
256 MLT2B2 15 n.s 99.0 Weakly correlated
257 MamRep605 15 n.s 99.0 Weakly correlated
258 HERV1_LTRe 14 **** 43.0 Moderately correlated
259 HERVH48-int 14 **** 28.9 Highly correlated
260 L1ME5 14 n.s 99.0 Weakly correlated
261 L1PB4 14 n.s 99.0 Weakly correlated
262 LTR1A2 14 * 43.0 Moderately correlated
263 LTR41 14 ** 99.0 Weakly correlated
264 LTR44 14 **** 74.0 Weakly correlated
265 LTR71B 14 **** 43.0 Moderately correlated
266 LTR85a 14 ** 99.0 Weakly correlated
267 MER4D1 14 n.s 74.0 Weakly correlated
268 MER61A 14 **** 43.0 Moderately correlated
269 MER77 14 * 99.0 Weakly correlated
270 HUERS-P3b-int 13 * 43.0 Moderately correlated
271 L1PREC2 13 n.s 43.0 Moderately correlated
272 LTR10F 13 **** 28.9 Highly correlated
273 LTR12F 13 *** 28.9 Highly correlated
274 LTR16E2 13 n.s 99.0 Weakly correlated
275 LTR24 13 **** 74.0 Weakly correlated
276 LTR65 13 **** 99.0 Weakly correlated
277 LTR7 13 n.s 19.6 Weakly correlated
278 LTR81A 13 **** 99.0 Weakly correlated
279 LTR81B 13 *** 99.0 Weakly correlated
280 MER41G 13 **** 74.0 Weakly correlated
281 MER4B-int 13 n.s 99.0 Weakly correlated
282 MER65B 13 **** 74.0 Weakly correlated
283 MER74B 13 ** 99.0 Weakly correlated
284 MLT1E3 13 n.s 99.0 Weakly correlated
285 MamGypsy2-I 13 n.s 99.0 Weakly correlated
286 ERV3-16A3_LTR 12 ** 99.0 Weakly correlated
287 HERVIP10FH-int 12 * 28.9 Highly correlated
288 HERVS71-int 12 * 28.9 Highly correlated
289 L1MA10 12 n.s 99.0 Weakly correlated
290 L1MB1 12 n.s 99.0 Weakly correlated
291 L1MEh 12 n.s 99.0 Weakly correlated
292 L1MEi 12 n.s 99.0 Weakly correlated
293 L1P2 12 n.s 28.9 Highly correlated
294 L1PA11 12 n.s 74.0 Weakly correlated
295 L1PA8 12 n.s 74.0 Weakly correlated
296 LTR33C 12 *** 99.0 Weakly correlated
297 LTR36 12 **** 74.0 Weakly correlated
298 LTR40b 12 ** 99.0 Weakly correlated
299 LTR47A2 12 **** 74.0 Weakly correlated
300 MER31B 12 n.s 99.0 Weakly correlated
301 MER34C2 12 **** 74.0 Weakly correlated
302 MLT2B3 12 n.s 99.0 Weakly correlated
303 MLT2C1 12 n.s 99.0 Weakly correlated
304 MSTB1 12 n.s 74.0 Weakly correlated
305 MamGypLTR2c 12 **** 99.0 Weakly correlated
306 AluYh3 11 n.s 15.2 Weakly correlated
307 FAM 11 n.s 87.0 Weakly correlated
308 L1M4a1 11 n.s 99.0 Weakly correlated
309 L1MA7 11 n.s 87.0 Weakly correlated
310 L1ME3D 11 n.s 99.0 Weakly correlated
311 L1PA15 11 n.s 74.0 Weakly correlated
312 L1PA5 11 n.s 19.6 Weakly correlated
313 LTR18C 11 **** 43.0 Moderately correlated
314 LTR29 11 *** 43.0 Moderately correlated
315 LTR43 11 **** 74.0 Weakly correlated
316 LTR51 11 **** 74.0 Weakly correlated
317 LTR71A 11 **** 43.0 Moderately correlated
318 MER39B 11 n.s 74.0 Weakly correlated
319 MER57B2 11 ** 43.0 Moderately correlated
320 MER73 11 **** 87.0 Weakly correlated
321 MER87 11 **** 43.0 Moderately correlated
322 PRIMA41-int 11 * 74.0 Weakly correlated
323 SVA_A 11 n.s 19.6 Weakly correlated
324 X6A_LINE 11 **** 99.0 Weakly correlated
325 AluYm1 10 n.s 19.6 Weakly correlated
326 AmnSINE2 10 **** 319.0 Weakly correlated
327 ERVL-int 10 n.s 99.0 Weakly correlated
328 HERV17-int 10 n.s 28.9 Highly correlated
329 HERV1_LTRa 10 **** 28.9 Highly correlated
330 L1ME3F 10 n.s 99.0 Weakly correlated
331 L1MEb 10 n.s 99.0 Weakly correlated
332 L2-1_AMi 10 *** 319.0 Weakly correlated
333 LTR64 10 **** 74.0 Weakly correlated
334 MER110 10 *** 99.0 Weakly correlated
335 MER11D 10 *** 19.6 Weakly correlated
336 MER51D 10 **** 43.0 Moderately correlated
337 MER57-int 10 n.s 87.0 Weakly correlated
338 MER65-int 10 n.s 87.0 Weakly correlated
339 MER67A 10 **** 99.0 Weakly correlated
340 MLT1J-int 10 n.s 99.0 Weakly correlated
341 CR1_Mam 9 n.s 99.0 Weakly correlated
342 HERV15-int 9 ** 28.9 Highly correlated
343 HERV9NC-int 9 n.s 19.6 Weakly correlated
344 HERVL18-int 9 n.s 43.0 Moderately correlated
345 L1M3 9 n.s 99.0 Weakly correlated
346 L1MA2 9 n.s 74.0 Weakly correlated
347 L1MDb 9 n.s 99.0 Weakly correlated
348 L1ME3C 9 n.s 99.0 Weakly correlated
349 LTR10C 9 * 28.9 Highly correlated
350 LTR26 9 * 74.0 Weakly correlated
351 LTR32 9 n.s 43.0 Moderately correlated
352 LTR33B 9 n.s 99.0 Weakly correlated
353 LTR39 9 n.s 43.0 Moderately correlated
354 MER31-int 9 n.s 99.0 Weakly correlated
355 MER34A1 9 ** 99.0 Weakly correlated
356 MER4A 9 n.s 74.0 Weakly correlated
357 MER4CL34 9 n.s 43.0 Moderately correlated
358 MER76 9 * 99.0 Weakly correlated
359 MER92C 9 **** 99.0 Weakly correlated
360 MamRep1527 9 * 99.0 Weakly correlated
361 SVA_D 9 n.s 15.2 Weakly correlated
362 AluYj4 8 n.s 0.0 Weakly correlated
363 HAL1M8 8 n.s 99.0 Weakly correlated
364 HERV16-int 8 n.s 99.0 Weakly correlated
365 HERVL40-int 8 n.s 99.0 Weakly correlated
366 HERVL74-int 8 ** 99.0 Weakly correlated
367 L1MA5A 8 n.s 87.0 Weakly correlated
368 L1MA6 8 n.s 87.0 Weakly correlated
369 L1P3 8 n.s 74.0 Weakly correlated
370 LTR16B2 8 n.s 99.0 Weakly correlated
371 LTR16D 8 * 99.0 Weakly correlated
372 MER34B 8 * 87.0 Weakly correlated
373 MER4D 8 n.s 74.0 Weakly correlated
374 MER52A 8 n.s 74.0 Weakly correlated
375 MER57E1 8 *** 87.0 Weakly correlated
376 MER61B 8 *** 43.0 Moderately correlated
377 MER65C 8 * 74.0 Weakly correlated
378 MER66D 8 **** 43.0 Moderately correlated
379 MamGypLTR1a 8 * 99.0 Weakly correlated
380 MamGypLTR3a 8 n.s 99.0 Weakly correlated
381 Penelope1_Vert 8 **** 319.0 Weakly correlated
382 SVA_B 8 n.s 15.2 Weakly correlated
383 AluSq4 7 n.s 74.0 Weakly correlated
384 AluYk3 7 n.s 19.6 Weakly correlated
385 HERV9-int 7 n.s 28.9 Highly correlated
386 HERVIP10F-int 7 n.s 28.9 Highly correlated
387 HERVK13-int 7 **** 19.6 Weakly correlated
388 HERVK3-int 7 n.s 28.9 Highly correlated
389 HERVP71A-int 7 n.s 43.0 Moderately correlated
390 L1MEg2 7 n.s 99.0 Weakly correlated
391 L1PBa1 7 n.s 74.0 Weakly correlated
392 LTR101_Mam 7 n.s 99.0 Weakly correlated
393 LTR102_Mam 7 * 99.0 Weakly correlated
394 LTR10E 7 ** 28.9 Highly correlated
395 LTR14 7 **** 28.9 Highly correlated
396 LTR16B1 7 n.s 99.0 Weakly correlated
397 LTR25-int 7 n.s 43.0 Moderately correlated
398 LTR30 7 *** 28.9 Highly correlated
399 LTR31 7 *** 74.0 Weakly correlated
400 LTR35A 7 **** 43.0 Moderately correlated
401 LTR45B 7 ** 74.0 Weakly correlated
402 LTR47B2 7 **** 74.0 Weakly correlated
403 LTR53B 7 **** 99.0 Weakly correlated
404 LTR77 7 **** 94.0 Weakly correlated
405 LTR85c 7 * 99.0 Weakly correlated
406 LTR88b 7 n.s 99.0 Weakly correlated
407 LTR88c 7 ** 99.0 Weakly correlated
408 MER21-int 7 n.s 99.0 Weakly correlated
409 MER61D 7 *** 43.0 Moderately correlated
410 MER67B 7 * 99.0 Weakly correlated
411 MER74C 7 **** 99.0 Weakly correlated
412 MER92B 7 n.s 99.0 Weakly correlated
413 AluSq10 6 n.s 74.0 Weakly correlated
414 AluYa5 6 n.s 15.2 Weakly correlated
415 AluYb8 6 n.s 15.2 Weakly correlated
416 AluYe5 6 n.s 74.0 Weakly correlated
417 ERV24B_Prim-int 6 n.s 74.0 Weakly correlated
418 HERV1_I-int 6 ** 43.0 Moderately correlated
419 L1M4a2 6 n.s 99.0 Weakly correlated
420 L1M8 6 n.s 99.0 Weakly correlated
421 L1P4 6 n.s 74.0 Weakly correlated
422 L1PA15-16 6 n.s 74.0 Weakly correlated
423 LTR13_ 6 **** 28.9 Highly correlated
424 LTR26E 6 **** 74.0 Weakly correlated
425 LTR2752 6 n.s 43.0 Moderately correlated
426 LTR2B 6 * 19.6 Weakly correlated
427 LTR38 6 ** 74.0 Weakly correlated
428 LTR40a 6 n.s 99.0 Weakly correlated
429 LTR48B 6 n.s 74.0 Weakly correlated
430 LTR49 6 n.s 74.0 Weakly correlated
431 LTR75 6 ** 99.0 Weakly correlated
432 LTR83 6 * 99.0 Weakly correlated
433 LTR87 6 n.s 99.0 Weakly correlated
434 LTR91 6 **** 99.0 Weakly correlated
435 MER34-int 6 * 99.0 Weakly correlated
436 MER34D 6 *** 74.0 Weakly correlated
437 MER50-int 6 n.s 43.0 Moderately correlated
438 MER57C2 6 * 87.0 Weakly correlated
439 MER66B 6 n.s 43.0 Moderately correlated
440 MER67C 6 n.s 99.0 Weakly correlated
441 MLT1C-int 6 n.s 94.0 Weakly correlated
442 MLT2A1 6 n.s 74.0 Weakly correlated
443 MLT2C2 6 n.s 99.0 Weakly correlated
444 MLT2E 6 ** 99.0 Weakly correlated
445 PABL_A 6 n.s 43.0 Moderately correlated
446 X6B_LINE 6 ** 99.0 Weakly correlated
447 X7A_LINE 6 ** 319.0 Weakly correlated
448 X7C_LINE 6 *** 319.0 Weakly correlated
449 HERV1_LTRd 5 **** 43.0 Moderately correlated
450 HERVFH21-int 5 * 28.9 Highly correlated
451 HERVK14-int 5 n.s 28.9 Highly correlated
452 L1M3c 5 n.s 99.0 Weakly correlated
453 L1M7 5 n.s 99.0 Weakly correlated
454 L1MA5 5 n.s 87.0 Weakly correlated
455 L1MEj 5 n.s 99.0 Weakly correlated
456 L1PA17 5 n.s 74.0 Weakly correlated
457 LOR1a 5 n.s 74.0 Weakly correlated
458 LTR10B1 5 *** 28.9 Highly correlated
459 LTR12E 5 * 19.6 Weakly correlated
460 LTR14C 5 ** 28.9 Highly correlated
461 LTR34 5 ** 74.0 Weakly correlated
462 LTR37B 5 n.s 99.0 Weakly correlated
463 LTR3A 5 ** 28.9 Highly correlated
464 LTR3B_ 5 ** 28.9 Highly correlated
465 LTR42 5 * 74.0 Weakly correlated
466 LTR47B4 5 **** 74.0 Weakly correlated
467 LTR69 5 *** 99.0 Weakly correlated
468 LTR7B 5 n.s 28.9 Highly correlated
469 LTR82B 5 n.s 99.0 Weakly correlated
470 MER101-int 5 n.s 74.0 Weakly correlated
471 MER4D0 5 n.s 74.0 Weakly correlated
472 MER51B 5 n.s 43.0 Moderately correlated
473 MER51E 5 ** 43.0 Moderately correlated
474 MER52C 5 n.s 74.0 Weakly correlated
475 MER61-int 5 n.s 43.0 Moderately correlated
476 MER61C 5 * 43.0 Moderately correlated
477 MER68B 5 * 99.0 Weakly correlated
478 MER72B 5 ** 43.0 Moderately correlated
479 MLT1E1 5 n.s 99.0 Weakly correlated
480 MLT1I-int 5 n.s 99.0 Weakly correlated
481 MLT1J1-int 5 n.s 99.0 Weakly correlated
482 THE1C-int 5 n.s 43.0 Moderately correlated
483 AluYh9 4 **** 15.2 Weakly correlated
484 ERVL47-int 4 n.s 74.0 Weakly correlated
485 HERV3-int 4 n.s 28.9 Highly correlated
486 HERV35I-int 4 n.s 43.0 Moderately correlated
487 HERVFH19-int 4 n.s 43.0 Moderately correlated
488 L1M2b 4 n.s 87.0 Weakly correlated
489 L1M2c 4 n.s 87.0 Weakly correlated
490 L1MCb 4 n.s 99.0 Weakly correlated
491 L1MEg1 4 n.s 99.0 Weakly correlated
492 L1P1 4 n.s 19.6 Weakly correlated
493 L1P4a 4 n.s 74.0 Weakly correlated
494 L1P5 4 * 74.0 Weakly correlated
495 L1PA14 4 n.s 74.0 Weakly correlated
496 L1PA4 4 n.s 19.6 Weakly correlated
497 LTR107_Mam 4 * 99.0 Weakly correlated
498 LTR10B 4 *** 28.9 Highly correlated
499 LTR10D 4 * 28.9 Highly correlated
500 LTR14A 4 ** 28.9 Highly correlated
501 LTR16D1 4 ** 99.0 Weakly correlated
502 LTR16D2 4 * 99.0 Weakly correlated
503 LTR27D 4 * 43.0 Moderately correlated
504 LTR3B 4 *** 28.9 Highly correlated
505 LTR40A1 4 n.s 99.0 Weakly correlated
506 LTR40c 4 n.s 99.0 Weakly correlated
507 LTR53-int 4 n.s 99.0 Weakly correlated
508 LTR58 4 *** 99.0 Weakly correlated
509 LTR81 4 ** 99.0 Weakly correlated
510 LTR84b 4 n.s 99.0 Weakly correlated
511 LTR9A1 4 n.s 43.0 Moderately correlated
512 MER101 4 * 74.0 Weakly correlated
513 MER51C 4 * 43.0 Moderately correlated
514 MER57D 4 n.s 87.0 Weakly correlated
515 MER57F 4 n.s 74.0 Weakly correlated
516 MER66A 4 n.s 43.0 Moderately correlated
517 MER70C 4 * 99.0 Weakly correlated
518 MER84 4 * 43.0 Moderately correlated
519 MER92A 4 *** 99.0 Weakly correlated
520 MLT1D-int 4 n.s 99.0 Weakly correlated
521 MLT1E 4 n.s 99.0 Weakly correlated
522 MLT1F-int 4 n.s 99.0 Weakly correlated
523 MLT1F2-int 4 n.s 99.0 Weakly correlated
524 MSTA-int 4 n.s 43.0 Moderately correlated
525 MSTA1 4 n.s 74.0 Weakly correlated
526 MamGypLTR3 4 n.s 99.0 Weakly correlated
527 PABL_A-int 4 n.s 74.0 Weakly correlated
528 PABL_B-int 4 n.s 74.0 Weakly correlated
529 PRIMA4_LTR 4 n.s 74.0 Weakly correlated
530 SVA_F 4 n.s 0.0 Weakly correlated
531 ERV24_Prim-int 3 n.s 74.0 Weakly correlated
532 HERV9N-int 3 n.s 19.6 Weakly correlated
533 HERVI-int 3 n.s 28.9 Highly correlated
534 HERVK14C-int 3 n.s 28.9 Highly correlated
535 HERVL66-int 3 n.s 43.0 Moderately correlated
536 L1HS 3 n.s 8.6 Weakly correlated
537 L1M6B 3 n.s 99.0 Weakly correlated
538 L1MA1 3 n.s 74.0 Weakly correlated
539 L1PA12 3 n.s 74.0 Weakly correlated
540 L1PBb 3 n.s 74.0 Weakly correlated
541 L5 3 n.s 99.0 Weakly correlated
542 LOR1-int 3 n.s 74.0 Weakly correlated
543 LOR1b 3 n.s 74.0 Weakly correlated
544 LTR1 3 n.s 43.0 Moderately correlated
545 LTR103_Mam 3 n.s 99.0 Weakly correlated
546 LTR103b_Mam 3 n.s 99.0 Weakly correlated
547 LTR105_Mam 3 n.s 99.0 Weakly correlated
548 LTR16B 3 n.s 99.0 Weakly correlated
549 LTR38B 3 n.s 74.0 Weakly correlated
550 LTR43B 3 n.s 74.0 Weakly correlated
551 LTR47B 3 **** 74.0 Weakly correlated
552 LTR5A 3 n.s 19.6 Weakly correlated
553 LTR86C 3 n.s 99.0 Weakly correlated
554 LTR88a 3 n.s 99.0 Weakly correlated
555 LTR89 3 n.s 99.0 Weakly correlated
556 MER110A 3 n.s 99.0 Weakly correlated
557 MER11A 3 n.s 28.9 Highly correlated
558 MER34B-int 3 n.s 99.0 Weakly correlated
559 MER34C 3 ** 87.0 Weakly correlated
560 MER34C_ 3 n.s 87.0 Weakly correlated
561 MER4E 3 n.s 74.0 Weakly correlated
562 MER50B 3 n.s 43.0 Moderately correlated
563 MER57C1 3 * 74.0 Weakly correlated
564 MER57E3 3 * 74.0 Weakly correlated
565 MER70B 3 n.s 87.0 Weakly correlated
566 MLT1A0-int 3 n.s 99.0 Weakly correlated
567 MLT1B-int 3 n.s 99.0 Weakly correlated
568 MLT1K-int 3 ** 99.0 Weakly correlated
569 MLT2A2 3 n.s 74.0 Weakly correlated
570 MamGypLTR1b 3 n.s 99.0 Weakly correlated
571 MamGypLTR1c 3 n.s 99.0 Weakly correlated
572 MamGypLTR1d 3 n.s 99.0 Weakly correlated
573 MamGypLTR2b 3 n.s 99.0 Weakly correlated
574 MamGypsy2-LTR 3 n.s 99.0 Weakly correlated
575 MamRep1151 3 n.s 99.0 Weakly correlated
576 X7B_LINE 3 n.s 319.0 Weakly correlated
577 AluYf1 2 n.s 19.6 Weakly correlated
578 AluYi6 2 n.s 15.2 Weakly correlated
579 AluYk2 2 n.s 19.6 Weakly correlated
580 AluYk4 2 n.s 15.2 Weakly correlated
581 CR1-16_AMi 2 n.s 319.0 Weakly correlated
582 CR1-L3A_Croc 2 * 319.0 Weakly correlated
583 HERV-Fc1-int 2 ** 8.6 Weakly correlated
584 HERVK9-int 2 n.s 28.9 Highly correlated
585 HERVL32-int 2 n.s 43.0 Moderately correlated
586 Harlequin-int 2 n.s 74.0 Weakly correlated
587 L1M3a 2 n.s 99.0 Weakly correlated
588 L1M3e 2 n.s 99.0 Weakly correlated
589 L1M3f 2 n.s 87.0 Weakly correlated
590 L1PB 2 n.s 74.0 Weakly correlated
591 L1PB2 2 n.s 74.0 Weakly correlated
592 L1PB3 2 n.s 74.0 Weakly correlated
593 LTR108e_Mam 2 n.s 99.0 Weakly correlated
594 LTR10B2 2 * 28.9 Highly correlated
595 LTR10G 2 n.s 28.9 Highly correlated
596 LTR12D 2 n.s 19.6 Weakly correlated
597 LTR12_ 2 n.s 28.9 Highly correlated
598 LTR14B 2 n.s 28.9 Highly correlated
599 LTR19-int 2 n.s 43.0 Moderately correlated
600 LTR1B1 2 n.s 43.0 Moderately correlated
601 LTR22E 2 n.s 28.9 Highly correlated
602 LTR23-int 2 n.s 74.0 Weakly correlated
603 LTR27C 2 n.s 43.0 Moderately correlated
604 LTR28B 2 n.s 43.0 Moderately correlated
605 LTR37-int 2 n.s 99.0 Weakly correlated
606 LTR43-int 2 n.s 74.0 Weakly correlated
607 LTR48 2 n.s 74.0 Weakly correlated
608 LTR57 2 n.s 74.0 Weakly correlated
609 LTR59 2 * 43.0 Moderately correlated
610 LTR61 2 n.s 43.0 Moderately correlated
611 LTR81C 2 n.s 99.0 Weakly correlated
612 LTR90A 2 n.s 99.0 Weakly correlated
613 MER31A 2 n.s 87.0 Weakly correlated
614 MER4E1 2 n.s 74.0 Weakly correlated
615 MER52-int 2 n.s 99.0 Weakly correlated
616 MER52D 2 n.s 74.0 Weakly correlated
617 MER57A1 2 n.s 43.0 Moderately correlated
618 MER66-int 2 n.s 43.0 Moderately correlated
619 MER70A 2 n.s 87.0 Weakly correlated
620 MER88 2 * 99.0 Weakly correlated
621 MLT1-int 2 n.s 99.0 Weakly correlated
622 MLT1G1-int 2 n.s 99.0 Weakly correlated
623 MLT1H1-int 2 n.s 99.0 Weakly correlated
624 MLT1H2-int 2 n.s 99.0 Weakly correlated
625 MLT1J2-int 2 n.s 99.0 Weakly correlated
626 MLT1O-int 2 **** 99.0 Weakly correlated
627 MSTB-int 2 n.s 43.0 Moderately correlated
628 MSTD-int 2 n.s 74.0 Weakly correlated
629 Mam_R4 2 n.s 99.0 Weakly correlated
630 SVA_C 2 n.s 15.2 Weakly correlated
631 THE1A-int 2 n.s 43.0 Moderately correlated
632 THE1D-int 2 n.s 28.9 Highly correlated
633 UCON86 2 *** 319.0 Weakly correlated
634 X1_LINE 2 ** 319.0 Weakly correlated
635 X9_LINE 2 n.s 319.0 Weakly correlated
636 AluYa8 1 n.s 15.2 Weakly correlated
637 AluYg6 1 n.s 15.2 Weakly correlated
638 AluYk11 1 n.s 15.2 Weakly correlated
639 HERV-Fc1_LTR1 1 ** 15.2 Weakly correlated
640 HERV4_I-int 1 n.s 43.0 Moderately correlated
641 HERVE_a-int 1 n.s 28.9 Highly correlated
642 HERVIP10B3-int 1 n.s 28.9 Highly correlated
643 HERVKC4-int 1 n.s 28.9 Highly correlated
644 L1M2a 1 n.s 87.0 Weakly correlated
645 L1M3b 1 n.s 99.0 Weakly correlated
646 L1P4b 1 n.s 74.0 Weakly correlated
647 L1P4d 1 n.s 74.0 Weakly correlated
648 LTR106_Mam 1 n.s 99.0 Weakly correlated
649 LTR1A1 1 n.s 43.0 Moderately correlated
650 LTR1C 1 n.s 43.0 Moderately correlated
651 LTR1D 1 n.s 43.0 Moderately correlated
652 LTR26D 1 n.s 0.0 Weakly correlated
653 LTR27 1 n.s 43.0 Moderately correlated
654 LTR28C 1 n.s 43.0 Moderately correlated
655 LTR35 1 n.s 43.0 Moderately correlated
656 LTR38A1 1 n.s 74.0 Weakly correlated
657 LTR72B 1 n.s 74.0 Weakly correlated
658 LTR80B 1 n.s 99.0 Weakly correlated
659 LTR84a 1 n.s 99.0 Weakly correlated
660 LTR86B1 1 n.s 99.0 Weakly correlated
661 LTR90B 1 n.s 99.0 Weakly correlated
662 MER11B 1 n.s 19.6 Weakly correlated
663 MER11C 1 n.s 19.6 Weakly correlated
664 MER57E2 1 n.s 87.0 Weakly correlated
665 MER83B 1 n.s 43.0 Moderately correlated
666 MER83C 1 n.s 43.0 Moderately correlated
667 MER95 1 n.s 99.0 Weakly correlated
668 MER9a1 1 n.s 19.6 Weakly correlated
669 MLT1E1-int 1 * 99.0 Weakly correlated
670 MLT1E1A-int 1 n.s 99.0 Weakly correlated
671 MLT1G-int 1 n.s 99.0 Weakly correlated
672 MLT1H-int 1 n.s 99.0 Weakly correlated
673 MSTB2 1 n.s 74.0 Weakly correlated
674 MamGyp-int 1 n.s 99.0 Weakly correlated
675 PABL_B 1 n.s 43.0 Moderately correlated
676 PrimLTR79 1 n.s 74.0 Weakly correlated
677 SVA_E 1 n.s 0.0 Weakly correlated
678 THE1B-int 1 n.s 43.0 Moderately correlated
679 X2_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MIRb 121 n.s 99.0 Weakly correlated
2 L2a 117 n.s 99.0 Weakly correlated
3 L2c 105 n.s 99.0 Weakly correlated
4 MIRc 62 n.s 99.0 Weakly correlated
5 L2b 58 n.s 99.0 Weakly correlated
6 L2 55 n.s 99.0 Weakly correlated
7 MIR 52 n.s 99.0 Weakly correlated
8 MER41B 37 **** 74.0 Weakly correlated
9 MIR3 37 n.s 99.0 Weakly correlated
10 LTR62 34 **** 74.0 Weakly correlated
11 MER61E 30 **** 43.0 Moderately correlated
12 LTR15 26 **** 28.9 Highly correlated
13 L3 23 n.s 99.0 Weakly correlated
14 LTR53 20 **** 99.0 Weakly correlated
15 LTR19B 19 **** 43.0 Moderately correlated
16 LTR54 18 **** 74.0 Weakly correlated
17 AluJb 17 n.s 74.0 Weakly correlated
18 MER49 16 * 43.0 Moderately correlated
19 MLT1J 16 n.s 99.0 Weakly correlated
20 LTR13A 16 **** 28.9 Highly correlated
21 MER72 16 *** 43.0 Moderately correlated
22 LTR19C 15 **** 43.0 Moderately correlated
23 MLT1K 15 n.s 99.0 Weakly correlated
24 LTR45C 15 **** 99.0 Weakly correlated
25 MLT1C 14 n.s 94.0 Weakly correlated
26 HAL1 14 n.s 99.0 Weakly correlated
27 MLT1B 13 n.s 99.0 Weakly correlated
28 MER41E 13 **** 74.0 Weakly correlated
29 L3b 13 n.s 99.0 Weakly correlated
30 L1MC4 12 n.s 99.0 Weakly correlated
31 MLT1L 12 n.s 99.0 Weakly correlated
32 LTR76 12 **** 74.0 Weakly correlated
33 MER41A 12 n.s 74.0 Weakly correlated
34 LTR13 12 * 19.6 Weakly correlated
35 MLT1H 12 n.s 99.0 Weakly correlated
36 MER54B 11 **** 87.0 Weakly correlated
37 LTR73 11 **** 99.0 Weakly correlated
38 LTR46 10 **** 43.0 Moderately correlated
39 L1MC5a 10 n.s 99.0 Weakly correlated
40 MER61F 10 **** 43.0 Moderately correlated
41 LTR6B 9 **** 19.6 Weakly correlated
42 LTR52 9 * 99.0 Weakly correlated
43 LTR21A 9 **** 28.9 Highly correlated
44 LTR5_Hs 9 n.s 0.0 Weakly correlated
45 MER89 9 n.s 99.0 Weakly correlated
46 MamRTE1 9 n.s 99.0 Weakly correlated
47 AluJo 9 n.s 74.0 Weakly correlated
48 AluJr 9 n.s 74.0 Weakly correlated
49 MLT1D 9 n.s 99.0 Weakly correlated
50 LTR16C 8 n.s 99.0 Weakly correlated
51 MLT1I 8 n.s 99.0 Weakly correlated
52 HERVH-int 8 n.s 28.9 Highly correlated
53 LTR55 8 ** 99.0 Weakly correlated
54 L1M4 8 n.s 99.0 Weakly correlated
55 LTR5B 8 n.s 28.9 Highly correlated
56 LTR6A 8 ** 28.9 Highly correlated
57 LTR71B 8 *** 43.0 Moderately correlated
58 LTR4 8 **** 28.9 Highly correlated
59 L4_A_Mam 8 n.s 99.0 Weakly correlated
60 L1ME4b 7 n.s 99.0 Weakly correlated
61 MER50 7 n.s 43.0 Moderately correlated
62 MER83 7 ** 43.0 Moderately correlated
63 MER65D 7 ** 87.0 Weakly correlated
64 LTR75_1 7 **** 99.0 Weakly correlated
65 MER34 7 n.s 87.0 Weakly correlated
66 HERVK22-int 7 n.s 43.0 Moderately correlated
67 L1MEd 6 n.s 99.0 Weakly correlated
68 MIR1_Amn 6 n.s 319.0 Weakly correlated
69 LTR24 6 ** 74.0 Weakly correlated
70 MER74B 6 n.s 99.0 Weakly correlated
71 L1MC3 6 n.s 99.0 Weakly correlated
72 LTR33 6 n.s 99.0 Weakly correlated
73 MLT1F 6 n.s 99.0 Weakly correlated
74 HERV1_LTRc 6 **** 28.9 Highly correlated
75 L1MEg 6 n.s 99.0 Weakly correlated
76 ERVL-E-int 6 n.s 99.0 Weakly correlated
77 L1MB2 6 n.s 99.0 Weakly correlated
78 L1MB7 6 n.s 99.0 Weakly correlated
79 MER4C 6 n.s 74.0 Weakly correlated
80 L2-3_Crp 6 n.s 431.0 Weakly correlated
81 LTR8 6 n.s 43.0 Moderately correlated
82 LTR47A2 5 ** 74.0 Weakly correlated
83 MER34C2 5 n.s 74.0 Weakly correlated
84 MER4A1 5 n.s 74.0 Weakly correlated
85 HERV1_LTRa 5 **** 28.9 Highly correlated
86 MER90a 5 n.s 99.0 Weakly correlated
87 L4_C_Mam 5 n.s 99.0 Weakly correlated
88 LTR25 5 * 43.0 Moderately correlated
89 MER39 5 n.s 74.0 Weakly correlated
90 LTR9D 5 n.s 43.0 Moderately correlated
91 MER11D 5 n.s 19.6 Weakly correlated
92 MLT1A 5 n.s 99.0 Weakly correlated
93 L1M5 5 n.s 99.0 Weakly correlated
94 LTR8B 5 n.s 43.0 Moderately correlated
95 MER34A 5 n.s 99.0 Weakly correlated
96 MER4B 5 n.s 74.0 Weakly correlated
97 LTR9 5 n.s 43.0 Moderately correlated
98 MER4CL34 5 n.s 43.0 Moderately correlated
99 MER77B 5 n.s 99.0 Weakly correlated
100 ERV3-16A3_I-int 5 n.s 99.0 Weakly correlated
101 LTR18B 5 n.s 43.0 Moderately correlated
102 MLT1H2 5 n.s 99.0 Weakly correlated
103 HAL1b 4 n.s 99.0 Weakly correlated
104 L1ME3G 4 n.s 99.0 Weakly correlated
105 L1PA7 4 n.s 74.0 Weakly correlated
106 LTR16E1 4 n.s 99.0 Weakly correlated
107 MLT1E2 4 n.s 99.0 Weakly correlated
108 L1ME4a 4 n.s 99.0 Weakly correlated
109 L1MEc 4 n.s 99.0 Weakly correlated
110 LTR50 4 n.s 99.0 Weakly correlated
111 MLT1A0 4 n.s 99.0 Weakly correlated
112 MLT1J1 4 n.s 99.0 Weakly correlated
113 THE1C 4 n.s 43.0 Moderately correlated
114 L1MC5 4 n.s 99.0 Weakly correlated
115 L1ME1 4 n.s 99.0 Weakly correlated
116 LTR32 4 n.s 43.0 Moderately correlated
117 LTR36 4 n.s 74.0 Weakly correlated
118 MLT1F2 4 n.s 99.0 Weakly correlated
119 MLT1N2 4 n.s 99.0 Weakly correlated
120 HAL1ME 4 n.s 99.0 Weakly correlated
121 HERV1_LTRe 4 **** 43.0 Moderately correlated
122 MER61C 4 * 43.0 Moderately correlated
123 L1MB4 3 n.s 99.0 Weakly correlated
124 L1ME3A 3 n.s 99.0 Weakly correlated
125 LTR85b 3 n.s 99.0 Weakly correlated
126 MER77 3 n.s 99.0 Weakly correlated
127 MamSINE1 3 n.s 99.0 Weakly correlated
128 LTR39 3 n.s 43.0 Moderately correlated
129 LTR44 3 n.s 74.0 Weakly correlated
130 MER92B 3 n.s 99.0 Weakly correlated
131 MSTA 3 n.s 43.0 Moderately correlated
132 MLT2B2 3 n.s 99.0 Weakly correlated
133 L1ME4c 3 n.s 99.0 Weakly correlated
134 L1MEf 3 n.s 99.0 Weakly correlated
135 LTR64 3 n.s 74.0 Weakly correlated
136 MER54A 3 n.s 87.0 Weakly correlated
137 MER57B2 3 n.s 43.0 Moderately correlated
138 AluSx1 3 n.s 74.0 Weakly correlated
139 LTR65 3 n.s 99.0 Weakly correlated
140 LTR9A1 3 n.s 43.0 Moderately correlated
141 MER110 3 n.s 99.0 Weakly correlated
142 MER92C 3 ** 99.0 Weakly correlated
143 Plat_L3 3 n.s 99.0 Weakly correlated
144 L1MB5 3 n.s 99.0 Weakly correlated
145 L1P3 3 n.s 74.0 Weakly correlated
146 L1PA6 3 n.s 28.9 Highly correlated
147 LFSINE_Vert 3 n.s 319.0 Weakly correlated
148 LTR33A_ 3 n.s 99.0 Weakly correlated
149 LTR78 3 n.s 99.0 Weakly correlated
150 MLT1M 3 n.s 99.0 Weakly correlated
151 L1MD1 3 n.s 99.0 Weakly correlated
152 MER4D 3 n.s 74.0 Weakly correlated
153 L1M1 3 n.s 74.0 Weakly correlated
154 L1MA9 3 n.s 99.0 Weakly correlated
155 L1MCa 3 n.s 99.0 Weakly correlated
156 MER41-int 3 n.s 74.0 Weakly correlated
157 MER61D 3 n.s 43.0 Moderately correlated
158 MER66C 3 n.s 43.0 Moderately correlated
159 MLT1E3 3 n.s 99.0 Weakly correlated
160 MLT1G3 3 n.s 99.0 Weakly correlated
161 THE1B 3 n.s 43.0 Moderately correlated
162 AluJr4 2 n.s 74.0 Weakly correlated
163 LTR19A 2 n.s 43.0 Moderately correlated
164 LTR48B 2 n.s 74.0 Weakly correlated
165 MER41C 2 n.s 74.0 Weakly correlated
166 MER4D1 2 n.s 74.0 Weakly correlated
167 MER84 2 n.s 43.0 Moderately correlated
168 MER87 2 n.s 43.0 Moderately correlated
169 AluSz6 2 n.s 74.0 Weakly correlated
170 AmnSINE1 2 n.s 319.0 Weakly correlated
171 HERV17-int 2 n.s 28.9 Highly correlated
172 HERV1_I-int 2 n.s 43.0 Moderately correlated
173 HERVP71A-int 2 n.s 43.0 Moderately correlated
174 L1MA4 2 n.s 87.0 Weakly correlated
175 L1MC 2 n.s 99.0 Weakly correlated
176 L1MEb 2 n.s 99.0 Weakly correlated
177 L1PBa1 2 n.s 74.0 Weakly correlated
178 LTR10E 2 n.s 28.9 Highly correlated
179 LTR16D 2 n.s 99.0 Weakly correlated
180 MER4E 2 n.s 74.0 Weakly correlated
181 L1MB3 2 n.s 99.0 Weakly correlated
182 L1MEi 2 n.s 99.0 Weakly correlated
183 LTR16B1 2 n.s 99.0 Weakly correlated
184 LTR3 2 * 28.9 Highly correlated
185 LTR34 2 n.s 74.0 Weakly correlated
186 LTR9B 2 n.s 43.0 Moderately correlated
187 MER110A 2 n.s 99.0 Weakly correlated
188 MER34A1 2 n.s 99.0 Weakly correlated
189 MER4B-int 2 n.s 99.0 Weakly correlated
190 MER51E 2 n.s 43.0 Moderately correlated
191 MER73 2 n.s 87.0 Weakly correlated
192 MLT2B4 2 n.s 99.0 Weakly correlated
193 AluSq2 2 n.s 74.0 Weakly correlated
194 CR1-3_Croc 2 n.s 319.0 Weakly correlated
195 HERV1_LTRd 2 *** 43.0 Moderately correlated
196 L1M4b 2 n.s 99.0 Weakly correlated
197 L1MA8 2 n.s 87.0 Weakly correlated
198 L1MC4a 2 n.s 99.0 Weakly correlated
199 L2-1_AMi 2 n.s 319.0 Weakly correlated
200 LTR25-int 2 n.s 43.0 Moderately correlated
201 LTR77 2 n.s 94.0 Weakly correlated
202 LTR85a 2 n.s 99.0 Weakly correlated
203 MER31-int 2 n.s 99.0 Weakly correlated
204 MER61B 2 n.s 43.0 Moderately correlated
205 MER65A 2 n.s 74.0 Weakly correlated
206 MER67C 2 n.s 99.0 Weakly correlated
207 MER88 2 * 99.0 Weakly correlated
208 MLT1E1A 2 n.s 99.0 Weakly correlated
209 MLT1G 2 n.s 99.0 Weakly correlated
210 MLT1G1 2 n.s 99.0 Weakly correlated
211 AluY 2 n.s 74.0 Weakly correlated
212 HUERS-P3-int 2 n.s 43.0 Moderately correlated
213 L1ME3Cz 2 n.s 99.0 Weakly correlated
214 L1PA10 2 n.s 74.0 Weakly correlated
215 LTR16A1 2 n.s 99.0 Weakly correlated
216 MER21C 2 n.s 99.0 Weakly correlated
217 MER34B 2 n.s 87.0 Weakly correlated
218 MER41D 2 n.s 74.0 Weakly correlated
219 MER4E1 2 n.s 74.0 Weakly correlated
220 MER74C 2 n.s 99.0 Weakly correlated
221 AluSx3 2 n.s 74.0 Weakly correlated
222 FRAM 2 n.s 74.0 Weakly correlated
223 L1MB8 2 n.s 99.0 Weakly correlated
224 LTR33A 2 n.s 99.0 Weakly correlated
225 LTR71A 2 n.s 43.0 Moderately correlated
226 LTR81A 2 n.s 99.0 Weakly correlated
227 LTR82A 2 n.s 99.0 Weakly correlated
228 MLT1I-int 2 n.s 99.0 Weakly correlated
229 MLT2B1 2 n.s 99.0 Weakly correlated
230 PABL_A 2 n.s 43.0 Moderately correlated
231 THE1D 2 n.s 43.0 Moderately correlated
232 AluSz 2 n.s 74.0 Weakly correlated
233 HERVIP10F-int 2 n.s 28.9 Highly correlated
234 L1MCc 2 n.s 99.0 Weakly correlated
235 L1PB1 2 n.s 74.0 Weakly correlated
236 L4_B_Mam 2 n.s 99.0 Weakly correlated
237 LTR10B 2 * 28.9 Highly correlated
238 LTR14 2 * 28.9 Highly correlated
239 LTR16A 2 n.s 99.0 Weakly correlated
240 LTR16E2 2 n.s 99.0 Weakly correlated
241 MER68 2 n.s 99.0 Weakly correlated
242 MER90 2 n.s 99.0 Weakly correlated
243 MLT1O 2 n.s 99.0 Weakly correlated
244 MamGypLTR2c 2 n.s 99.0 Weakly correlated
245 HERVE-int 2 n.s 19.6 Weakly correlated
246 HERVL-int 2 n.s 74.0 Weakly correlated
247 L1MD2 2 n.s 99.0 Weakly correlated
248 LTR10D 2 n.s 28.9 Highly correlated
249 MER11A 2 n.s 28.9 Highly correlated
250 MER65C 2 n.s 74.0 Weakly correlated
251 MLT1H1 2 n.s 99.0 Weakly correlated
252 MLT1J2 2 n.s 99.0 Weakly correlated
253 HAL1M8 1 n.s 99.0 Weakly correlated
254 HERV9NC-int 1 n.s 19.6 Weakly correlated
255 L1M3 1 n.s 99.0 Weakly correlated
256 L1MB1 1 n.s 99.0 Weakly correlated
257 L1ME3C 1 n.s 99.0 Weakly correlated
258 L1PREC2 1 n.s 43.0 Moderately correlated
259 LTR29 1 n.s 43.0 Moderately correlated
260 LTR47B4 1 n.s 74.0 Weakly correlated
261 LTR49-int 1 n.s 74.0 Weakly correlated
262 LTR67B 1 n.s 99.0 Weakly correlated
263 MER51C 1 n.s 43.0 Moderately correlated
264 MER74A 1 n.s 99.0 Weakly correlated
265 MSTB 1 n.s 43.0 Moderately correlated
266 X7A_LINE 1 n.s 319.0 Weakly correlated
267 ERV3-16A3_LTR 1 n.s 99.0 Weakly correlated
268 FLAM_C 1 n.s 74.0 Weakly correlated
269 L1MA2 1 n.s 74.0 Weakly correlated
270 L1MD 1 n.s 99.0 Weakly correlated
271 L1ME3E 1 n.s 99.0 Weakly correlated
272 LTR23 1 n.s 74.0 Weakly correlated
273 LTR41B 1 n.s 99.0 Weakly correlated
274 LTR53B 1 n.s 99.0 Weakly correlated
275 LTR58 1 n.s 99.0 Weakly correlated
276 LTR81B 1 n.s 99.0 Weakly correlated
277 LTR82B 1 n.s 99.0 Weakly correlated
278 LTR8A 1 n.s 43.0 Moderately correlated
279 MER21A 1 n.s 74.0 Weakly correlated
280 MLT1F1 1 n.s 99.0 Weakly correlated
281 MLT1J-int 1 n.s 99.0 Weakly correlated
282 MSTB1 1 n.s 74.0 Weakly correlated
283 MSTD 1 n.s 74.0 Weakly correlated
284 L1M8 1 n.s 99.0 Weakly correlated
285 L1MA5A 1 n.s 87.0 Weakly correlated
286 L1PA13 1 n.s 74.0 Weakly correlated
287 LOR1-int 1 n.s 74.0 Weakly correlated
288 LTR101_Mam 1 n.s 99.0 Weakly correlated
289 LTR38A1 1 n.s 74.0 Weakly correlated
290 LTR41C 1 n.s 99.0 Weakly correlated
291 LTR43 1 n.s 74.0 Weakly correlated
292 LTR48 1 n.s 74.0 Weakly correlated
293 LTR75 1 n.s 99.0 Weakly correlated
294 MER70B 1 n.s 87.0 Weakly correlated
295 MLT1J1-int 1 n.s 99.0 Weakly correlated
296 MLT1J2-int 1 n.s 99.0 Weakly correlated
297 HERVL32-int 1 n.s 43.0 Moderately correlated
298 L1M7 1 n.s 99.0 Weakly correlated
299 L1MEj 1 n.s 99.0 Weakly correlated
300 L1P4a 1 n.s 74.0 Weakly correlated
301 L1PA11 1 n.s 74.0 Weakly correlated
302 LOR1b 1 n.s 74.0 Weakly correlated
303 LTR16B 1 n.s 99.0 Weakly correlated
304 LTR40c 1 n.s 99.0 Weakly correlated
305 MER21-int 1 n.s 99.0 Weakly correlated
306 MER31A 1 n.s 87.0 Weakly correlated
307 MER34D 1 n.s 74.0 Weakly correlated
308 MER57C2 1 n.s 87.0 Weakly correlated
309 MER72B 1 n.s 43.0 Moderately correlated
310 MLT1F2-int 1 n.s 99.0 Weakly correlated
311 MamGypsy2-I 1 n.s 99.0 Weakly correlated
312 SVA_B 1 n.s 15.2 Weakly correlated
313 AluSg 1 n.s 74.0 Weakly correlated
314 L1MC1 1 n.s 99.0 Weakly correlated
315 L1PA2 1 n.s 15.2 Weakly correlated
316 L1PA8 1 n.s 74.0 Weakly correlated
317 LTR103_Mam 1 n.s 99.0 Weakly correlated
318 LTR13_ 1 n.s 28.9 Highly correlated
319 LTR1A2 1 n.s 43.0 Moderately correlated
320 LTR30 1 n.s 28.9 Highly correlated
321 LTR40b 1 n.s 99.0 Weakly correlated
322 LTR46-int 1 n.s 74.0 Weakly correlated
323 LTR47A 1 n.s 74.0 Weakly correlated
324 MER4-int 1 n.s 74.0 Weakly correlated
325 MER50-int 1 n.s 43.0 Moderately correlated
326 MER67B 1 n.s 99.0 Weakly correlated
327 MER70A 1 n.s 87.0 Weakly correlated
328 MLT1A1 1 n.s 87.0 Weakly correlated
329 MLT1D-int 1 n.s 99.0 Weakly correlated
330 Mam_R4 1 n.s 99.0 Weakly correlated
331 PRIMA4_LTR 1 n.s 74.0 Weakly correlated
332 HERV16-int 1 n.s 99.0 Weakly correlated
333 HERVK-int 1 n.s 28.9 Highly correlated
334 HERVK13-int 1 n.s 19.6 Weakly correlated
335 HUERS-P3b-int 1 n.s 43.0 Moderately correlated
336 L1M2 1 n.s 99.0 Weakly correlated
337 L1M4a1 1 n.s 99.0 Weakly correlated
338 L1MD3 1 n.s 99.0 Weakly correlated
339 L1ME2z 1 n.s 99.0 Weakly correlated
340 L1PA15-16 1 n.s 74.0 Weakly correlated
341 LTR16A2 1 n.s 99.0 Weakly correlated
342 LTR33C 1 n.s 99.0 Weakly correlated
343 LTR56 1 n.s 74.0 Weakly correlated
344 LTR84b 1 n.s 99.0 Weakly correlated
345 MER101-int 1 n.s 74.0 Weakly correlated
346 MER4A 1 n.s 74.0 Weakly correlated
347 MER92A 1 n.s 99.0 Weakly correlated
348 THE1C-int 1 n.s 43.0 Moderately correlated
349 X6A_LINE 1 n.s 99.0 Weakly correlated
350 AluSx 1 n.s 74.0 Weakly correlated
351 HERVK14-int 1 n.s 28.9 Highly correlated
352 L1ME3B 1 n.s 99.0 Weakly correlated
353 L1PA17 1 n.s 74.0 Weakly correlated
354 LTR104_Mam 1 n.s 99.0 Weakly correlated
355 LTR26 1 n.s 74.0 Weakly correlated
356 LTR37-int 1 n.s 99.0 Weakly correlated
357 LTR3B 1 n.s 28.9 Highly correlated
358 LTR51 1 n.s 74.0 Weakly correlated
359 LTR78B 1 n.s 99.0 Weakly correlated
360 LTR80B 1 n.s 99.0 Weakly correlated
361 LTR88a 1 n.s 99.0 Weakly correlated
362 MER34-int 1 n.s 99.0 Weakly correlated
363 MER65-int 1 n.s 87.0 Weakly correlated
364 MLT1B-int 1 n.s 99.0 Weakly correlated
365 MLT1H1-int 1 n.s 99.0 Weakly correlated
366 MLT2D 1 n.s 99.0 Weakly correlated
367 MamGyp-int 1 n.s 99.0 Weakly correlated
368 X6B_LINE 1 n.s 99.0 Weakly correlated
369 ERVL-B4-int 1 n.s 99.0 Weakly correlated
370 ERVL-int 1 n.s 99.0 Weakly correlated
371 HERV9-int 1 n.s 28.9 Highly correlated
372 HERVIP10FH-int 1 n.s 28.9 Highly correlated
373 HERVL40-int 1 n.s 99.0 Weakly correlated
374 L1MCb 1 n.s 99.0 Weakly correlated
375 L1ME3 1 n.s 99.0 Weakly correlated
376 L1PA15 1 n.s 74.0 Weakly correlated
377 L1PBa 1 n.s 74.0 Weakly correlated
378 LOR1a 1 n.s 74.0 Weakly correlated
379 LTR1B1 1 n.s 43.0 Moderately correlated
380 LTR27C 1 n.s 43.0 Moderately correlated
381 LTR31 1 n.s 74.0 Weakly correlated
382 MER21B 1 n.s 99.0 Weakly correlated
383 MER51D 1 n.s 43.0 Moderately correlated
384 MER57-int 1 n.s 87.0 Weakly correlated
385 MER70C 1 n.s 99.0 Weakly correlated
386 MLT1C-int 1 n.s 94.0 Weakly correlated
387 MLT2F 1 n.s 99.0 Weakly correlated
388 THE1A 1 n.s 43.0 Moderately correlated
389 X1_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ERVL-E-INT 99.0 Weakly correlated
2 HAL1 99.0 Weakly correlated
3 HERV1_LTRC 28.9 Highly correlated
4 HERVH-INT 28.9 Highly correlated
5 HERVK22-INT 43.0 Moderately correlated
6 L1M4 99.0 Weakly correlated
7 L1MB2 99.0 Weakly correlated
8 L1MC3 99.0 Weakly correlated
9 L1MC4 99.0 Weakly correlated
10 L1MC5A 99.0 Weakly correlated
11 L2 99.0 Weakly correlated
12 L2A 99.0 Weakly correlated
13 L2C 99.0 Weakly correlated
14 L3 99.0 Weakly correlated
15 L3B 99.0 Weakly correlated
16 L4_A_MAM 99.0 Weakly correlated
17 LTR13 19.6 Weakly correlated
18 LTR13A 28.9 Highly correlated
19 LTR15 28.9 Highly correlated
20 LTR16C 99.0 Weakly correlated
21 LTR19B 43.0 Moderately correlated
22 LTR19C 43.0 Moderately correlated
23 LTR21A 28.9 Highly correlated
24 LTR24 74.0 Weakly correlated
25 LTR4 28.9 Highly correlated
26 LTR45C 99.0 Weakly correlated
27 LTR46 43.0 Moderately correlated
28 LTR53 99.0 Weakly correlated
29 LTR54 74.0 Weakly correlated
30 LTR55 99.0 Weakly correlated
31 LTR5B 28.9 Highly correlated
32 LTR5_HS 0.0 Weakly correlated
33 LTR62 74.0 Weakly correlated
34 LTR6A 28.9 Highly correlated
35 LTR6B 19.6 Weakly correlated
36 LTR71B 43.0 Moderately correlated
37 LTR73 99.0 Weakly correlated
38 LTR75_1 99.0 Weakly correlated
39 LTR76 74.0 Weakly correlated
40 LTR8 43.0 Moderately correlated
41 MER34 87.0 Weakly correlated
42 MER41A 74.0 Weakly correlated
43 MER41B 74.0 Weakly correlated
44 MER41E 74.0 Weakly correlated
45 MER4C 74.0 Weakly correlated
46 MER54B 87.0 Weakly correlated
47 MER61E 43.0 Moderately correlated
48 MER61F 43.0 Moderately correlated
49 MER65D 87.0 Weakly correlated
50 MER72 43.0 Moderately correlated
51 MER74B 99.0 Weakly correlated
52 MER83 43.0 Moderately correlated
53 MER89 99.0 Weakly correlated
54 MIR 99.0 Weakly correlated
55 MIR1_AMN 319.0 Weakly correlated
56 MIR3 99.0 Weakly correlated
57 MIRB 99.0 Weakly correlated
58 MIRC 99.0 Weakly correlated
59 MLT1B 99.0 Weakly correlated
60 MLT1C 94.0 Weakly correlated
61 MLT1D 99.0 Weakly correlated
62 MLT1J 99.0 Weakly correlated
63 MLT1L 99.0 Weakly correlated
64 MAMRTE1 99.0 Weakly correlated