ZRdb KZFP & Repeats
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Human_ZNF671

  • Protein
    Zinc finger protein 671
  • Length
    534
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    94.0 Mya
  • Time of Changing in binding specificity
    94.0 Mya
  • Uniprot_ID
  • NCBI_ID
Sequence:
MLSPVSRDASDALQGRKCLRPRSRRLPLPAAVRAHGPMAELTDSARGCVVFEDVFVYFSREEWELLDDAQRLLYHDVMLENFALLASLGIAFSRSRAVMKLERGEEPWVYDQVDMTSATEREAQRGLRPGCWHGVEDEEVSSEQSIFVAGVSEVRTLMAELESHPCDICGPILKDTLHLAKYHGGKARQKPYLCGACGKQFWFSTDFDQHQNQPNGGKLFPRKEGRDSVKSCRVHVPEKTLTCGKGRRDFSATSGLLQHQASLSSMKPHKSTKLVSGFLMGQRYHRCGECGKAFTRKDTLARHQRIHTGERPYECNECGKFFSQSYDLFKHQTVHTGERPYECSECGKFFRQISGLIEHRRVHTGERLYQCGKCGKFFSSKSNLIRHQEVHTGARPYVCSECGKEFSRKHTLVLHQRTHTGERPYECSECGKAFSQSSHLNVHWRIHSSDYECSRCGKAFSCISKLIQHQKVHSGEKPYECSKCGKAFTQRPNLIRHWKVHTGERPYVCSECGREFIRKQTLVLHQRVHAGEKL
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 49..120
2 dec2h2 192..214
3 C2h2 285..307
4 C2h2 313..335
5 C2h2 341..363
6 C2h2 369..391
7 C2h2 397..419
8 C2h2 425..447
9 C2h2 451..473
10 C2h2 479..501
11 C2h2 507..529
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 126 **** 99.0 Moderately correlated
2 HERVL-int 79 **** 74.0 Weakly correlated
3 L2 78 **** 99.0 Moderately correlated
4 L2c 76 **** 99.0 Moderately correlated
5 L2b 62 **** 99.0 Moderately correlated
6 MIRb 53 n.s 99.0 Moderately correlated
7 AluJb 46 n.s 74.0 Weakly correlated
8 LTR10F 46 **** 28.9 Weakly correlated
9 MIR 39 n.s 99.0 Moderately correlated
10 AluSx 35 n.s 74.0 Weakly correlated
11 AluY 35 n.s 74.0 Weakly correlated
12 AluSx1 34 n.s 74.0 Weakly correlated
13 AluSz 30 n.s 74.0 Weakly correlated
14 L1M4b 30 **** 99.0 Moderately correlated
15 MLT2B3 28 **** 99.0 Moderately correlated
16 AluJo 27 n.s 74.0 Weakly correlated
17 AluSq2 25 n.s 74.0 Weakly correlated
18 MSTA 24 **** 43.0 Weakly correlated
19 L1PA2 23 * 15.2 Weakly correlated
20 AluYj4 21 **** 0.0 Weakly correlated
21 MIRc 21 n.s 99.0 Moderately correlated
22 AluJr 20 n.s 74.0 Weakly correlated
23 AluSz6 18 n.s 74.0 Weakly correlated
24 L1ME1 18 n.s 99.0 Moderately correlated
25 MIR3 18 n.s 99.0 Moderately correlated
26 AluSp 17 n.s 74.0 Weakly correlated
27 L1M5 16 n.s 99.0 Moderately correlated
28 L3 16 n.s 99.0 Moderately correlated
29 AluSc 15 n.s 74.0 Weakly correlated
30 L1MB3 15 n.s 99.0 Moderately correlated
31 L1PA3 14 n.s 19.6 Weakly correlated
32 HAL1 13 n.s 99.0 Moderately correlated
33 L1M4 12 n.s 99.0 Moderately correlated
34 L1MB8 12 n.s 99.0 Moderately correlated
35 AluSg 11 n.s 74.0 Weakly correlated
36 ERVL-B4-int 11 ** 99.0 Moderately correlated
37 L1MC4 11 n.s 99.0 Moderately correlated
38 AluSx3 9 n.s 74.0 Weakly correlated
39 L1MB7 9 n.s 99.0 Moderately correlated
40 L1MEc 9 n.s 99.0 Moderately correlated
41 L1PA5 9 n.s 19.6 Weakly correlated
42 FRAM 8 **** 74.0 Weakly correlated
43 L1MC3 8 n.s 99.0 Moderately correlated
44 L1PA4 8 n.s 19.6 Weakly correlated
45 MLT1K 8 n.s 99.0 Moderately correlated
46 MSTB 8 * 43.0 Weakly correlated
47 AluSc8 7 n.s 74.0 Weakly correlated
48 MLT1D 7 n.s 99.0 Moderately correlated
49 THE1D 7 n.s 43.0 Weakly correlated
50 AluSq 6 n.s 74.0 Weakly correlated
51 L1M1 6 n.s 74.0 Weakly correlated
52 L1MB4 6 n.s 99.0 Moderately correlated
53 L1ME4b 6 n.s 99.0 Moderately correlated
54 L1P1 6 n.s 19.6 Weakly correlated
55 L1PA6 6 n.s 28.9 Weakly correlated
56 LTR1A2 6 **** 43.0 Weakly correlated
57 LTR45B 6 **** 74.0 Weakly correlated
58 MER21C 6 n.s 99.0 Moderately correlated
59 MLT2B4 6 ** 99.0 Moderately correlated
60 AluYa5 5 * 15.2 Weakly correlated
61 FLAM_C 5 n.s 74.0 Weakly correlated
62 HERVE_a-int 5 **** 28.9 Weakly correlated
63 HERVIP10B3-int 5 **** 28.9 Weakly correlated
64 Harlequin-int 5 ** 74.0 Weakly correlated
65 L1MA5A 5 n.s 87.0 Weakly correlated
66 L1MD1 5 n.s 99.0 Moderately correlated
67 MLT1B 5 n.s 99.0 Moderately correlated
68 MLT1H 5 n.s 99.0 Moderately correlated
69 MLT1O 5 ** 99.0 Moderately correlated
70 MSTC 5 ** 74.0 Weakly correlated
71 AluJr4 4 n.s 74.0 Weakly correlated
72 AluYa8 4 **** 15.2 Weakly correlated
73 AluYf1 4 ** 19.6 Weakly correlated
74 ERV3-16A3_I-int 4 n.s 99.0 Moderately correlated
75 ERVL-int 4 ** 99.0 Moderately correlated
76 HERVIP10FH-int 4 *** 28.9 Weakly correlated
77 L1MC5 4 n.s 99.0 Moderately correlated
78 L1MCa 4 n.s 99.0 Moderately correlated
79 L1ME2 4 n.s 99.0 Moderately correlated
80 L1ME2z 4 n.s 99.0 Moderately correlated
81 L1PA7 4 n.s 74.0 Weakly correlated
82 L1PB1 4 n.s 74.0 Weakly correlated
83 LTR10A 4 **** 28.9 Weakly correlated
84 LTR13 4 *** 19.6 Weakly correlated
85 LTR8 4 n.s 43.0 Weakly correlated
86 MLT1G 4 * 99.0 Moderately correlated
87 MLT1L 4 n.s 99.0 Moderately correlated
88 MSTD 4 n.s 74.0 Weakly correlated
89 Alu 3 *** 74.0 Weakly correlated
90 AluSc5 3 n.s 74.0 Weakly correlated
91 AluSg4 3 n.s 74.0 Weakly correlated
92 AluSx4 3 n.s 74.0 Weakly correlated
93 ERVL-E-int 3 n.s 99.0 Moderately correlated
94 HERVE-int 3 * 19.6 Weakly correlated
95 L1M2 3 n.s 99.0 Moderately correlated
96 L1MA8 3 n.s 87.0 Weakly correlated
97 L1MC 3 n.s 99.0 Moderately correlated
98 L1MC5a 3 n.s 99.0 Moderately correlated
99 L1MD2 3 n.s 99.0 Moderately correlated
100 L1ME3 3 n.s 99.0 Moderately correlated
101 L1ME3A 3 n.s 99.0 Moderately correlated
102 L1ME3B 3 n.s 99.0 Moderately correlated
103 L1MEg 3 n.s 99.0 Moderately correlated
104 L1P2 3 n.s 28.9 Weakly correlated
105 L1P3 3 n.s 74.0 Weakly correlated
106 L2-3_Crp 3 ** 431.0 Weakly correlated
107 LTR33A 3 * 99.0 Moderately correlated
108 LTR41C 3 *** 99.0 Moderately correlated
109 LTR50 3 * 99.0 Moderately correlated
110 LTR8B 3 * 43.0 Weakly correlated
111 MER4-int 3 n.s 74.0 Weakly correlated
112 MER41-int 3 n.s 74.0 Weakly correlated
113 MLT1A0 3 n.s 99.0 Moderately correlated
114 MLT1H1 3 n.s 99.0 Moderately correlated
115 MLT1I 3 n.s 99.0 Moderately correlated
116 MLT2A2 3 n.s 74.0 Weakly correlated
117 MLT2C2 3 ** 99.0 Moderately correlated
118 THE1B 3 n.s 43.0 Weakly correlated
119 AluYh3 2 n.s 15.2 Weakly correlated
120 AluYh9 2 **** 15.2 Weakly correlated
121 AluYm1 2 n.s 19.6 Weakly correlated
122 AmnSINE1 2 ** 319.0 Weakly correlated
123 FLAM_A 2 n.s 74.0 Weakly correlated
124 HERVK-int 2 n.s 28.9 Weakly correlated
125 HUERS-P3b-int 2 * 43.0 Weakly correlated
126 L1MA2 2 n.s 74.0 Weakly correlated
127 L1MA3 2 n.s 74.0 Weakly correlated
128 L1MA4 2 n.s 87.0 Weakly correlated
129 L1MB2 2 n.s 99.0 Moderately correlated
130 L1MB5 2 n.s 99.0 Moderately correlated
131 L1MC1 2 n.s 99.0 Moderately correlated
132 L1MC2 2 n.s 99.0 Moderately correlated
133 L1MC4a 2 n.s 99.0 Moderately correlated
134 L1MD 2 n.s 99.0 Moderately correlated
135 L1MD3 2 n.s 99.0 Moderately correlated
136 L1ME3Cz 2 n.s 99.0 Moderately correlated
137 L1ME3E 2 n.s 99.0 Moderately correlated
138 L1ME4c 2 n.s 99.0 Moderately correlated
139 L1MEi 2 n.s 99.0 Moderately correlated
140 L1PA13 2 n.s 74.0 Weakly correlated
141 L1PB4 2 n.s 99.0 Moderately correlated
142 L1PBa 2 n.s 74.0 Weakly correlated
143 L1PBa1 2 n.s 74.0 Weakly correlated
144 L3b 2 n.s 99.0 Moderately correlated
145 L4_B_Mam 2 n.s 99.0 Moderately correlated
146 LTR101_Mam 2 * 99.0 Moderately correlated
147 LTR12 2 n.s 28.9 Weakly correlated
148 LTR16 2 n.s 99.0 Moderately correlated
149 LTR16D2 2 *** 99.0 Moderately correlated
150 LTR16E1 2 n.s 99.0 Moderately correlated
151 LTR29 2 ** 43.0 Weakly correlated
152 LTR33 2 n.s 99.0 Moderately correlated
153 LTR41 2 * 99.0 Moderately correlated
154 LTR56 2 * 74.0 Weakly correlated
155 LTR67B 2 n.s 99.0 Moderately correlated
156 MER41B 2 n.s 74.0 Weakly correlated
157 MER61C 2 *** 43.0 Weakly correlated
158 MER61D 2 *** 43.0 Weakly correlated
159 MLT1A1 2 n.s 87.0 Weakly correlated
160 MLT1C 2 n.s 94.0 Highly correlated
161 MLT1F 2 n.s 99.0 Moderately correlated
162 MLT1F1 2 n.s 99.0 Moderately correlated
163 MLT1F2 2 n.s 99.0 Moderately correlated
164 MLT1G1 2 n.s 99.0 Moderately correlated
165 MLT1J 2 n.s 99.0 Moderately correlated
166 MLT1J2 2 n.s 99.0 Moderately correlated
167 MLT1M 2 * 99.0 Moderately correlated
168 MLT2B1 2 n.s 99.0 Moderately correlated
169 MLT2C1 2 n.s 99.0 Moderately correlated
170 MLT2D 2 n.s 99.0 Moderately correlated
171 MSTA-int 2 n.s 43.0 Weakly correlated
172 MamGypLTR1b 2 ** 99.0 Moderately correlated
173 MamRep605 2 n.s 99.0 Moderately correlated
174 THE1B-int 2 n.s 43.0 Weakly correlated
175 AluSg7 1 n.s 74.0 Weakly correlated
176 AluSq10 1 n.s 74.0 Weakly correlated
177 AluYc 1 n.s 74.0 Weakly correlated
178 AluYe5 1 n.s 74.0 Weakly correlated
179 AluYh7 1 *** 0.0 Weakly correlated
180 AluYk11 1 * 15.2 Weakly correlated
181 AluYk2 1 n.s 19.6 Weakly correlated
182 HERVFH21-int 1 * 28.9 Weakly correlated
183 HERVH48-int 1 * 28.9 Weakly correlated
184 HERVK11-int 1 n.s 28.9 Weakly correlated
185 HERVK3-int 1 n.s 28.9 Weakly correlated
186 HERVKC4-int 1 ** 28.9 Weakly correlated
187 HERVL18-int 1 n.s 43.0 Weakly correlated
188 HERVL74-int 1 * 99.0 Moderately correlated
189 L1HS 1 n.s 8.6 Weakly correlated
190 L1M2c 1 n.s 87.0 Weakly correlated
191 L1M3b 1 n.s 99.0 Moderately correlated
192 L1M4a1 1 n.s 99.0 Moderately correlated
193 L1M4a2 1 n.s 99.0 Moderately correlated
194 L1M6 1 n.s 99.0 Moderately correlated
195 L1MA4A 1 n.s 87.0 Weakly correlated
196 L1MA7 1 n.s 87.0 Weakly correlated
197 L1MB1 1 n.s 99.0 Moderately correlated
198 L1MCc 1 n.s 99.0 Moderately correlated
199 L1MDa 1 n.s 99.0 Moderately correlated
200 L1ME3D 1 n.s 99.0 Moderately correlated
201 L1ME3F 1 n.s 99.0 Moderately correlated
202 L1ME3G 1 n.s 99.0 Moderately correlated
203 L1ME4a 1 n.s 99.0 Moderately correlated
204 L1ME5 1 n.s 99.0 Moderately correlated
205 L1MEf 1 n.s 99.0 Moderately correlated
206 L1MEj 1 n.s 99.0 Moderately correlated
207 L1PA10 1 n.s 74.0 Weakly correlated
208 L1PA14 1 n.s 74.0 Weakly correlated
209 L1PA15 1 n.s 74.0 Weakly correlated
210 L1PA17 1 n.s 74.0 Weakly correlated
211 L2-1_AMi 1 * 319.0 Weakly correlated
212 L4_C_Mam 1 n.s 99.0 Moderately correlated
213 LFSINE_Vert 1 n.s 319.0 Weakly correlated
214 LTR1 1 * 43.0 Weakly correlated
215 LTR104_Mam 1 n.s 99.0 Moderately correlated
216 LTR12C 1 n.s 19.6 Weakly correlated
217 LTR12F 1 n.s 28.9 Weakly correlated
218 LTR13_ 1 ** 28.9 Weakly correlated
219 LTR14 1 ** 28.9 Weakly correlated
220 LTR16A1 1 n.s 99.0 Moderately correlated
221 LTR16B1 1 n.s 99.0 Moderately correlated
222 LTR16D 1 n.s 99.0 Moderately correlated
223 LTR16D1 1 ** 99.0 Moderately correlated
224 LTR17 1 n.s 28.9 Weakly correlated
225 LTR18A 1 ** 43.0 Weakly correlated
226 LTR1A1 1 n.s 43.0 Weakly correlated
227 LTR1D 1 n.s 43.0 Weakly correlated
228 LTR21B 1 *** 28.9 Weakly correlated
229 LTR23 1 * 74.0 Weakly correlated
230 LTR26 1 n.s 74.0 Weakly correlated
231 LTR26C 1 * 0.0 Weakly correlated
232 LTR27 1 ** 43.0 Weakly correlated
233 LTR27E 1 * 43.0 Weakly correlated
234 LTR28C 1 * 43.0 Weakly correlated
235 LTR33B 1 n.s 99.0 Moderately correlated
236 LTR49-int 1 n.s 74.0 Weakly correlated
237 LTR55 1 * 99.0 Moderately correlated
238 LTR65 1 * 99.0 Moderately correlated
239 LTR72B 1 ** 74.0 Weakly correlated
240 LTR85b 1 n.s 99.0 Moderately correlated
241 LTR8A 1 n.s 43.0 Weakly correlated
242 LTR9 1 n.s 43.0 Weakly correlated
243 MER21-int 1 n.s 99.0 Moderately correlated
244 MER21B 1 n.s 99.0 Moderately correlated
245 MER31-int 1 n.s 99.0 Moderately correlated
246 MER31A 1 n.s 87.0 Weakly correlated
247 MER39 1 n.s 74.0 Weakly correlated
248 MER39B 1 n.s 74.0 Weakly correlated
249 MER49 1 n.s 43.0 Weakly correlated
250 MER4A 1 n.s 74.0 Weakly correlated
251 MER4A1 1 n.s 74.0 Weakly correlated
252 MER4B-int 1 n.s 99.0 Moderately correlated
253 MER50-int 1 n.s 43.0 Weakly correlated
254 MER51E 1 ** 43.0 Weakly correlated
255 MER52D 1 n.s 74.0 Weakly correlated
256 MER57A-int 1 n.s 43.0 Weakly correlated
257 MER57E3 1 ** 74.0 Weakly correlated
258 MER61F 1 ** 43.0 Weakly correlated
259 MER65A 1 n.s 74.0 Weakly correlated
260 MER65C 1 * 74.0 Weakly correlated
261 MER66B 1 n.s 43.0 Weakly correlated
262 MER68 1 n.s 99.0 Moderately correlated
263 MER68-int 1 * 99.0 Moderately correlated
264 MER74A 1 n.s 99.0 Moderately correlated
265 MER74C 1 ** 99.0 Moderately correlated
266 MER87B 1 ** 74.0 Weakly correlated
267 MER90a 1 n.s 99.0 Moderately correlated
268 MLT1A1-int 1 n.s 87.0 Weakly correlated
269 MLT1E2 1 n.s 99.0 Moderately correlated
270 MLT1G3 1 n.s 99.0 Moderately correlated
271 MLT1H2 1 n.s 99.0 Moderately correlated
272 MLT1J1 1 n.s 99.0 Moderately correlated
273 MLT1N2 1 n.s 99.0 Moderately correlated
274 MLT2A1 1 n.s 74.0 Weakly correlated
275 MLT2B2 1 n.s 99.0 Moderately correlated
276 MLT2B5 1 * 87.0 Weakly correlated
277 MLT2F 1 n.s 99.0 Moderately correlated
278 MSTB1 1 n.s 74.0 Weakly correlated
279 MamGypLTR3 1 * 99.0 Moderately correlated
280 MamRTE1 1 n.s 99.0 Moderately correlated
281 MamSINE1 1 n.s 99.0 Moderately correlated
282 PABL_A-int 1 n.s 74.0 Weakly correlated
283 SVA_A 1 n.s 19.6 Weakly correlated
284 SVA_E 1 n.s 0.0 Weakly correlated
285 THE1A 1 n.s 43.0 Weakly correlated
286 THE1C 1 n.s 43.0 Weakly correlated
287 THE1C-int 1 n.s 43.0 Weakly correlated
288 X7B_LINE 1 * 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 58 n.s 99.0 Moderately correlated
2 L2 43 *** 99.0 Moderately correlated
3 LTR10F 31 **** 28.9 Weakly correlated
4 L2c 28 n.s 99.0 Moderately correlated
5 L2b 22 n.s 99.0 Moderately correlated
6 MSTA 21 *** 43.0 Weakly correlated
7 L1M4b 19 **** 99.0 Moderately correlated
8 MLT2B3 15 **** 99.0 Moderately correlated
9 AluJb 13 n.s 74.0 Weakly correlated
10 MIRb 9 n.s 99.0 Moderately correlated
11 ERVL-B4-int 9 * 99.0 Moderately correlated
12 HERVL-int 9 n.s 74.0 Weakly correlated
13 AluSx 9 n.s 74.0 Weakly correlated
14 MIR 8 n.s 99.0 Moderately correlated
15 L1ME1 8 n.s 99.0 Moderately correlated
16 L1MB8 7 n.s 99.0 Moderately correlated
17 MIR3 7 n.s 99.0 Moderately correlated
18 THE1D 6 n.s 43.0 Weakly correlated
19 AluSq2 6 n.s 74.0 Weakly correlated
20 HAL1 6 n.s 99.0 Moderately correlated
21 L1PA4 5 n.s 19.6 Weakly correlated
22 L1MB7 5 n.s 99.0 Moderately correlated
23 L1MC3 5 n.s 99.0 Moderately correlated
24 LTR45B 5 **** 74.0 Weakly correlated
25 AluJo 5 n.s 74.0 Weakly correlated
26 L3 5 n.s 99.0 Moderately correlated
27 L1MC4 5 n.s 99.0 Moderately correlated
28 L1MEc 5 n.s 99.0 Moderately correlated
29 AluSx3 4 n.s 74.0 Weakly correlated
30 MLT2B4 4 n.s 99.0 Moderately correlated
31 L1MB3 4 n.s 99.0 Moderately correlated
32 AluJr 4 n.s 74.0 Weakly correlated
33 Harlequin-int 4 ** 74.0 Weakly correlated
34 L1M4 4 n.s 99.0 Moderately correlated
35 MLT1O 4 * 99.0 Moderately correlated
36 L1ME4b 3 n.s 99.0 Moderately correlated
37 MLT1G 3 * 99.0 Moderately correlated
38 L1MD1 3 n.s 99.0 Moderately correlated
39 L1PA3 3 n.s 19.6 Weakly correlated
40 MLT1H 3 n.s 99.0 Moderately correlated
41 MLT1K 3 n.s 99.0 Moderately correlated
42 AluSx1 3 n.s 74.0 Weakly correlated
43 ERVL-int 3 ** 99.0 Moderately correlated
44 MLT1D 3 n.s 99.0 Moderately correlated
45 L1MC5 3 n.s 99.0 Moderately correlated
46 L1ME2z 3 n.s 99.0 Moderately correlated
47 L1PA2 3 n.s 15.2 Weakly correlated
48 L1MB4 3 n.s 99.0 Moderately correlated
49 MSTC 3 n.s 74.0 Weakly correlated
50 MSTD 3 n.s 74.0 Weakly correlated
51 AluSc 3 n.s 74.0 Weakly correlated
52 L1M5 3 n.s 99.0 Moderately correlated
53 LTR1A2 3 ** 43.0 Weakly correlated
54 HERVIP10FH-int 2 * 28.9 Weakly correlated
55 MLT1J2 2 n.s 99.0 Moderately correlated
56 AluY 2 n.s 74.0 Weakly correlated
57 AluYf1 2 n.s 19.6 Weakly correlated
58 LTR8 2 n.s 43.0 Weakly correlated
59 MLT2A2 2 n.s 74.0 Weakly correlated
60 MSTB 2 n.s 43.0 Weakly correlated
61 MLT1F2 2 n.s 99.0 Moderately correlated
62 MLT2C1 2 n.s 99.0 Moderately correlated
63 HERVK-int 2 n.s 28.9 Weakly correlated
64 L2-3_Crp 2 * 431.0 Weakly correlated
65 MER21C 2 n.s 99.0 Moderately correlated
66 MER61C 2 *** 43.0 Weakly correlated
67 MLT1F1 2 n.s 99.0 Moderately correlated
68 MLT2B1 2 n.s 99.0 Moderately correlated
69 L1P2 2 n.s 28.9 Weakly correlated
70 L1PA5 2 n.s 19.6 Weakly correlated
71 MLT1B 2 n.s 99.0 Moderately correlated
72 MLT1G1 2 n.s 99.0 Moderately correlated
73 L1MA5A 2 n.s 87.0 Weakly correlated
74 HERVE_a-int 2 * 28.9 Weakly correlated
75 L1M1 2 n.s 74.0 Weakly correlated
76 L1P1 2 n.s 19.6 Weakly correlated
77 MSTA-int 2 n.s 43.0 Weakly correlated
78 AluSc5 2 n.s 74.0 Weakly correlated
79 AluSz 2 n.s 74.0 Weakly correlated
80 AluYa8 2 **** 15.2 Weakly correlated
81 L1MA4 2 n.s 87.0 Weakly correlated
82 L1PA6 2 n.s 28.9 Weakly correlated
83 L1PBa 2 n.s 74.0 Weakly correlated
84 LTR16D2 2 *** 99.0 Moderately correlated
85 LTR8B 2 n.s 43.0 Weakly correlated
86 MIRc 2 n.s 99.0 Moderately correlated
87 AmnSINE1 1 n.s 319.0 Weakly correlated
88 L1MB1 1 n.s 99.0 Moderately correlated
89 L1MC4a 1 n.s 99.0 Moderately correlated
90 L1MD2 1 n.s 99.0 Moderately correlated
91 L1ME3A 1 n.s 99.0 Moderately correlated
92 L1ME3B 1 n.s 99.0 Moderately correlated
93 L1ME3E 1 n.s 99.0 Moderately correlated
94 LTR27 1 ** 43.0 Weakly correlated
95 LTR33 1 n.s 99.0 Moderately correlated
96 MLT1A1 1 n.s 87.0 Weakly correlated
97 MLT2B2 1 n.s 99.0 Moderately correlated
98 L1MA7 1 n.s 87.0 Weakly correlated
99 L1MEf 1 n.s 99.0 Moderately correlated
100 L1PA14 1 n.s 74.0 Weakly correlated
101 L1PA15 1 n.s 74.0 Weakly correlated
102 L1PA17 1 n.s 74.0 Weakly correlated
103 LTR16B1 1 n.s 99.0 Moderately correlated
104 LTR33B 1 n.s 99.0 Moderately correlated
105 LTR56 1 n.s 74.0 Weakly correlated
106 MER52D 1 n.s 74.0 Weakly correlated
107 MER65C 1 * 74.0 Weakly correlated
108 MLT1H1 1 n.s 99.0 Moderately correlated
109 MamGypLTR1b 1 n.s 99.0 Moderately correlated
110 MamRTE1 1 n.s 99.0 Moderately correlated
111 THE1B-int 1 n.s 43.0 Weakly correlated
112 AluSq 1 n.s 74.0 Weakly correlated
113 L1M2 1 n.s 99.0 Moderately correlated
114 L1ME2 1 n.s 99.0 Moderately correlated
115 L1ME3 1 n.s 99.0 Moderately correlated
116 L1ME5 1 n.s 99.0 Moderately correlated
117 L1PA10 1 n.s 74.0 Weakly correlated
118 L1PA8A 1 n.s 74.0 Weakly correlated
119 L2-1_AMi 1 * 319.0 Weakly correlated
120 MER74A 1 n.s 99.0 Moderately correlated
121 MLT1C 1 n.s 94.0 Highly correlated
122 MLT1L 1 n.s 99.0 Moderately correlated
123 MLT1N2 1 n.s 99.0 Moderately correlated
124 MSTB1 1 n.s 74.0 Weakly correlated
125 AluSz6 1 n.s 74.0 Weakly correlated
126 L1M3b 1 n.s 99.0 Moderately correlated
127 L1MC 1 n.s 99.0 Moderately correlated
128 L1MC1 1 n.s 99.0 Moderately correlated
129 L1MEg 1 n.s 99.0 Moderately correlated
130 LTR50 1 n.s 99.0 Moderately correlated
131 MER21-int 1 n.s 99.0 Moderately correlated
132 MER68-int 1 * 99.0 Moderately correlated
133 MLT2C2 1 n.s 99.0 Moderately correlated
134 MLT2D 1 n.s 99.0 Moderately correlated
135 THE1C 1 n.s 43.0 Weakly correlated
136 X7B_LINE 1 * 319.0 Weakly correlated
137 ERVL-E-int 1 n.s 99.0 Moderately correlated
138 FLAM_A 1 n.s 74.0 Weakly correlated
139 HERVKC4-int 1 ** 28.9 Weakly correlated
140 L1MDa 1 n.s 99.0 Moderately correlated
141 L1P3 1 n.s 74.0 Weakly correlated
142 LTR29 1 * 43.0 Weakly correlated
143 LTR41C 1 * 99.0 Moderately correlated
144 MER57A-int 1 n.s 43.0 Weakly correlated
145 MER61D 1 * 43.0 Weakly correlated
146 MER74C 1 ** 99.0 Moderately correlated
147 THE1C-int 1 n.s 43.0 Weakly correlated
148 AluSg4 1 n.s 74.0 Weakly correlated
149 HERVIP10B3-int 1 n.s 28.9 Weakly correlated
150 L1M4a2 1 n.s 99.0 Moderately correlated
151 L1MEi 1 n.s 99.0 Moderately correlated
152 L1PB1 1 n.s 74.0 Weakly correlated
153 L4_B_Mam 1 n.s 99.0 Moderately correlated
154 LTR26C 1 * 0.0 Weakly correlated
155 LTR55 1 * 99.0 Moderately correlated
156 LTR67B 1 n.s 99.0 Moderately correlated
157 MER41-int 1 n.s 74.0 Weakly correlated
158 MLT1J1 1 n.s 99.0 Moderately correlated
159 AluSg 1 n.s 74.0 Weakly correlated
160 L1M2c 1 n.s 87.0 Weakly correlated
161 L1M6 1 n.s 99.0 Moderately correlated
162 L1MC5a 1 n.s 99.0 Moderately correlated
163 L1PA13 1 n.s 74.0 Weakly correlated
164 LTR16 1 n.s 99.0 Moderately correlated
165 MLT2A1 1 n.s 74.0 Weakly correlated
166 MLT2B5 1 * 87.0 Weakly correlated
167 AluSp 1 n.s 74.0 Weakly correlated
168 FRAM 1 n.s 74.0 Weakly correlated
169 HUERS-P3b-int 1 n.s 43.0 Weakly correlated
170 L1MA2 1 n.s 74.0 Weakly correlated
171 L1MD 1 n.s 99.0 Moderately correlated
172 L1ME3Cz 1 n.s 99.0 Moderately correlated
173 L1MEj 1 n.s 99.0 Moderately correlated
174 L3b 1 n.s 99.0 Moderately correlated
175 LTR16E1 1 n.s 99.0 Moderately correlated
176 LTR18A 1 ** 43.0 Weakly correlated
177 LTR1D 1 n.s 43.0 Weakly correlated
178 LTR41 1 n.s 99.0 Moderately correlated
179 MER31-int 1 n.s 99.0 Moderately correlated
180 MER61F 1 ** 43.0 Weakly correlated
181 MER66B 1 n.s 43.0 Weakly correlated
182 MLT1J 1 n.s 99.0 Moderately correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUSX 74.0 Weakly correlated
2 ERVL-B4-INT 99.0 Moderately correlated
3 HAL1 99.0 Moderately correlated
4 HERVL-INT 74.0 Weakly correlated
5 L1M4B 99.0 Moderately correlated
6 L1MB8 99.0 Moderately correlated
7 L2 99.0 Moderately correlated
8 L2B 99.0 Moderately correlated
9 L2C 99.0 Moderately correlated
10 MIR 99.0 Moderately correlated
11 MIRB 99.0 Moderately correlated
12 MLT2B3 99.0 Moderately correlated
13 MSTA 43.0 Weakly correlated
14 THE1D 43.0 Weakly correlated