ZRdb KZFP & Repeats
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Human_ZFP57

  • Protein
    Zinc finger protein 57 homolog
  • Length
    452
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    87.0 Mya
  • Uniprot_ID
    Q9NU63
  • NCBI_ID
    346171
Sequence:
MAAGEPRSLLFFQKPVTFEDVAVNFTQEEWDCLDASQRVLYQDVMSETFKNLTSVARIFLHKPELITKLEQEEEQWRETRVLQASQAGPPFFCYTCGKCFSRRSYLYSHQFVHNPKLTNSCSQCGKLFRSPKSLSYHRRMHLGERPFCCTLCDKTYCDASGLSRHRRVHLGYRPHSCSVCGKSFRDQSELKRHQKIHQNQEPVDGNQECTLRIPGTQAEFQTPIARSQRSIQGLLDVNHAPVARSQEPIFRTEGPMAQNQASVLKNQAPVTRTQAPITGTLCQDARSNSHPVKPSRLNVFCCPHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHWKQKSYLCPICDLSFGEKEGLMDHWRGYKGKDLCQSSHHKCRVILGQWLGFSHDVPTMAGEEWKHGGDQSPPRIHTPRRRGLREKACKGDKTKEAVSILKHK
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 16..88
2 C2h2 91..113
3 C2h2 119..141
4 C2h2 147..169
5 C2h2 175..197
6 C2h2 300..322
7 C2h2 328..350
8 dec2h2 356..378
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function chromatin binding
3 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
4 Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific
5 Molecular Function metal ion binding
6 Molecular Function RNA polymerase II transcription regulatory region sequence-specific DNA binding
7 Biological Process DNA methylation involved in embryo development
8 Biological Process negative regulation of transcription by RNA polymerase II
9 Biological Process regulation of gene expression by genomic imprinting
10 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 LTR12C 355 **** 19.6 Weakly correlated
2 AluY 292 **** 74.0 Weakly correlated
3 MIRb 220 n.s 99.0 Moderately correlated
4 L2a 197 n.s 99.0 Moderately correlated
5 AluSx 188 n.s 74.0 Weakly correlated
6 AluJb 180 n.s 74.0 Weakly correlated
7 AluSx1 176 n.s 74.0 Weakly correlated
8 AluSz 167 n.s 74.0 Weakly correlated
9 L1PA4 162 ** 19.6 Weakly correlated
10 HERVH-int 159 **** 28.9 Weakly correlated
11 MIR 143 n.s 99.0 Moderately correlated
12 AluSp 137 *** 74.0 Weakly correlated
13 L2c 132 n.s 99.0 Moderately correlated
14 LTR17 123 **** 28.9 Weakly correlated
15 SVA_D 123 **** 15.2 Weakly correlated
16 L1PA3 114 n.s 19.6 Weakly correlated
17 AluSq2 112 n.s 74.0 Weakly correlated
18 L1PA5 109 n.s 19.6 Weakly correlated
19 L2b 108 n.s 99.0 Moderately correlated
20 SVA_B 89 **** 15.2 Weakly correlated
21 MIRc 83 n.s 99.0 Moderately correlated
22 AluJo 82 n.s 74.0 Weakly correlated
23 L2 77 n.s 99.0 Moderately correlated
24 MIR3 73 n.s 99.0 Moderately correlated
25 LTR12D 72 **** 19.6 Weakly correlated
26 MLT1C 71 **** 94.0 Moderately correlated
27 AluJr 69 n.s 74.0 Weakly correlated
28 L1MB3 63 * 99.0 Moderately correlated
29 AluSz6 62 n.s 74.0 Weakly correlated
30 AluSg 61 n.s 74.0 Weakly correlated
31 AluSc 60 n.s 74.0 Weakly correlated
32 MLT1D 60 * 99.0 Moderately correlated
33 AluSx3 59 n.s 74.0 Weakly correlated
34 SVA_F 58 **** 0.0 Weakly correlated
35 MER50 56 **** 43.0 Weakly correlated
36 AluSc8 55 * 74.0 Weakly correlated
37 L1PA2 54 n.s 15.2 Weakly correlated
38 L1M5 53 n.s 99.0 Moderately correlated
39 L1PA7 52 n.s 74.0 Weakly correlated
40 SVA_A 49 **** 19.6 Weakly correlated
41 L1PB1 38 n.s 74.0 Weakly correlated
42 L3 38 n.s 99.0 Moderately correlated
43 L1PA6 37 n.s 28.9 Weakly correlated
44 MamRTE1 35 **** 99.0 Moderately correlated
45 AluSq 34 n.s 74.0 Weakly correlated
46 L1MB7 34 n.s 99.0 Moderately correlated
47 SVA_C 34 **** 15.2 Weakly correlated
48 L1PA16 32 n.s 74.0 Weakly correlated
49 THE1A 31 **** 43.0 Weakly correlated
50 THE1B-int 31 n.s 43.0 Weakly correlated
51 L1PA10 30 n.s 74.0 Weakly correlated
52 L1ME1 29 n.s 99.0 Moderately correlated
53 L1MC4 28 n.s 99.0 Moderately correlated
54 HERVL-int 27 n.s 74.0 Weakly correlated
55 MLT1B 26 n.s 99.0 Moderately correlated
56 L1PA13 24 n.s 74.0 Weakly correlated
57 MLT1A1 24 ** 87.0 Highly correlated
58 HAL1 23 n.s 99.0 Moderately correlated
59 L1PA11 23 n.s 74.0 Weakly correlated
60 L1MB5 22 n.s 99.0 Moderately correlated
61 L1MC3 22 n.s 99.0 Moderately correlated
62 L1MEd 22 n.s 99.0 Moderately correlated
63 MLT1F2 22 * 99.0 Moderately correlated
64 MLT1K 22 n.s 99.0 Moderately correlated
65 L1MA9 21 n.s 99.0 Moderately correlated
66 L1ME3A 21 n.s 99.0 Moderately correlated
67 L1ME3B 21 n.s 99.0 Moderately correlated
68 L1PREC2 21 n.s 43.0 Weakly correlated
69 MLT1G1 21 **** 99.0 Moderately correlated
70 THE1B 21 n.s 43.0 Weakly correlated
71 HERVH48-int 20 **** 28.9 Weakly correlated
72 L1PA8 20 n.s 74.0 Weakly correlated
73 LTR10F 20 **** 28.9 Weakly correlated
74 MLT1A0 20 n.s 99.0 Moderately correlated
75 ERVL-E-int 19 n.s 99.0 Moderately correlated
76 L1M1 19 n.s 74.0 Weakly correlated
77 L1MC4a 19 n.s 99.0 Moderately correlated
78 L1MD2 19 n.s 99.0 Moderately correlated
79 L1P1 19 n.s 19.6 Weakly correlated
80 LTR10A 19 **** 28.9 Weakly correlated
81 LTR13 19 **** 19.6 Weakly correlated
82 MER52A 19 * 74.0 Weakly correlated
83 MLT1I 19 n.s 99.0 Moderately correlated
84 MLT1L 19 n.s 99.0 Moderately correlated
85 THE1C 19 n.s 43.0 Weakly correlated
86 AluSg7 18 n.s 74.0 Weakly correlated
87 L1M2 18 n.s 99.0 Moderately correlated
88 L1M4 18 n.s 99.0 Moderately correlated
89 L1MC5a 18 n.s 99.0 Moderately correlated
90 L1MD1 18 n.s 99.0 Moderately correlated
91 L1MEf 18 n.s 99.0 Moderately correlated
92 MER52D 18 **** 74.0 Weakly correlated
93 MLT1H 18 n.s 99.0 Moderately correlated
94 AluJr4 17 n.s 74.0 Weakly correlated
95 L1HS 17 n.s 8.6 Weakly correlated
96 L1PA15 17 n.s 74.0 Weakly correlated
97 L1MA4 16 n.s 87.0 Highly correlated
98 L1MC1 16 n.s 99.0 Moderately correlated
99 L1ME4b 16 n.s 99.0 Moderately correlated
100 L1PA17 16 n.s 74.0 Weakly correlated
101 LOR1b 16 **** 74.0 Weakly correlated
102 LTR27E 16 **** 43.0 Weakly correlated
103 MER57D 16 **** 87.0 Highly correlated
104 MIR1_Amn 16 ** 319.0 Weakly correlated
105 THE1D-int 16 n.s 28.9 Weakly correlated
106 AluYm1 15 * 19.6 Weakly correlated
107 HERVE-int 15 **** 19.6 Weakly correlated
108 L1PA8A 15 n.s 74.0 Weakly correlated
109 LTR12 15 **** 28.9 Weakly correlated
110 MER66B 15 **** 43.0 Weakly correlated
111 MSTB 15 n.s 43.0 Weakly correlated
112 FRAM 14 ** 74.0 Weakly correlated
113 HERVL18-int 14 **** 43.0 Weakly correlated
114 L1MB1 14 n.s 99.0 Moderately correlated
115 L1MB8 14 n.s 99.0 Moderately correlated
116 LTR12E 14 **** 19.6 Weakly correlated
117 LTR1A2 14 **** 43.0 Weakly correlated
118 Alu 13 **** 74.0 Weakly correlated
119 HERVK9-int 13 * 28.9 Weakly correlated
120 L1MA3 13 n.s 74.0 Weakly correlated
121 L1MDa 13 n.s 99.0 Moderately correlated
122 L1MEc 13 n.s 99.0 Moderately correlated
123 L1PB2 13 n.s 74.0 Weakly correlated
124 MSTA-int 13 n.s 43.0 Weakly correlated
125 ERV3-16A3_I-int 12 n.s 99.0 Moderately correlated
126 HERVK13-int 12 **** 19.6 Weakly correlated
127 L1M3 12 n.s 99.0 Moderately correlated
128 L1MA2 12 n.s 74.0 Weakly correlated
129 L1MB2 12 n.s 99.0 Moderately correlated
130 L1ME4a 12 n.s 99.0 Moderately correlated
131 LTR10B1 12 **** 28.9 Weakly correlated
132 LTR8 12 n.s 43.0 Weakly correlated
133 MLT1N2 12 * 99.0 Moderately correlated
134 MSTC 12 * 74.0 Weakly correlated
135 SVA_E 12 **** 0.0 Weakly correlated
136 HERVIP10F-int 11 *** 28.9 Weakly correlated
137 HERVK3-int 11 **** 28.9 Weakly correlated
138 L1MA6 11 n.s 87.0 Highly correlated
139 L1MA8 11 n.s 87.0 Highly correlated
140 L1MD3 11 n.s 99.0 Moderately correlated
141 L1ME2z 11 n.s 99.0 Moderately correlated
142 L1ME3Cz 11 n.s 99.0 Moderately correlated
143 L1ME3G 11 n.s 99.0 Moderately correlated
144 LTR10G 11 **** 28.9 Weakly correlated
145 LTR67B 11 ** 99.0 Moderately correlated
146 MER49 11 *** 43.0 Weakly correlated
147 MLT1F1 11 * 99.0 Moderately correlated
148 MLT1J2 11 n.s 99.0 Moderately correlated
149 MSTA 11 n.s 43.0 Weakly correlated
150 AluSc5 10 n.s 74.0 Weakly correlated
151 AluSx4 10 n.s 74.0 Weakly correlated
152 AluYc 10 n.s 74.0 Weakly correlated
153 FLAM_C 10 n.s 74.0 Weakly correlated
154 HERVK22-int 10 ** 43.0 Weakly correlated
155 L1MC2 10 n.s 99.0 Moderately correlated
156 L1MEg 10 n.s 99.0 Moderately correlated
157 LTR30 10 **** 28.9 Weakly correlated
158 MER41B 10 n.s 74.0 Weakly correlated
159 MER4D 10 ** 74.0 Weakly correlated
160 MLT1F 10 n.s 99.0 Moderately correlated
161 MLT1J 10 n.s 99.0 Moderately correlated
162 MSTD 10 n.s 74.0 Weakly correlated
163 THE1C-int 10 n.s 43.0 Weakly correlated
164 THE1D 10 n.s 43.0 Weakly correlated
165 AluSg4 9 n.s 74.0 Weakly correlated
166 HERV9NC-int 9 * 19.6 Weakly correlated
167 HERVIP10FH-int 9 *** 28.9 Weakly correlated
168 HERVK11-int 9 *** 28.9 Weakly correlated
169 HERVK14-int 9 **** 28.9 Weakly correlated
170 L1MA4A 9 n.s 87.0 Highly correlated
171 L1MD 9 n.s 99.0 Moderately correlated
172 L1ME3 9 n.s 99.0 Moderately correlated
173 L1P2 9 n.s 28.9 Weakly correlated
174 LTR12F 9 **** 28.9 Weakly correlated
175 MamSINE1 9 * 99.0 Moderately correlated
176 AluYj4 8 n.s 0.0 Weakly correlated
177 AluYk4 8 *** 15.2 Weakly correlated
178 HERV17-int 8 n.s 28.9 Weakly correlated
179 L1MC5 8 n.s 99.0 Moderately correlated
180 L1PBa 8 n.s 74.0 Weakly correlated
181 LOR1a 8 *** 74.0 Weakly correlated
182 LTR12_ 8 *** 28.9 Weakly correlated
183 LTR16E2 8 * 99.0 Moderately correlated
184 LTR33 8 n.s 99.0 Moderately correlated
185 LTR40b 8 *** 99.0 Moderately correlated
186 LTR41 8 ** 99.0 Moderately correlated
187 LTR9 8 ** 43.0 Weakly correlated
188 MER70B 8 *** 87.0 Highly correlated
189 MLT1G3 8 n.s 99.0 Moderately correlated
190 AluYh3 7 n.s 15.2 Weakly correlated
191 ERVL-B4-int 7 n.s 99.0 Moderately correlated
192 L1M3c 7 n.s 99.0 Moderately correlated
193 L1MB4 7 n.s 99.0 Moderately correlated
194 L1MCa 7 n.s 99.0 Moderately correlated
195 L1PB4 7 n.s 99.0 Moderately correlated
196 LTR16B2 7 * 99.0 Moderately correlated
197 LTR56 7 ** 74.0 Weakly correlated
198 LTR78 7 n.s 99.0 Moderately correlated
199 MER4A1 7 n.s 74.0 Weakly correlated
200 MER50B 7 ** 43.0 Weakly correlated
201 MER57A-int 7 n.s 43.0 Weakly correlated
202 MLT1H2 7 n.s 99.0 Moderately correlated
203 MLT2F 7 n.s 99.0 Moderately correlated
204 MSTB2 7 * 74.0 Weakly correlated
205 MamRep605 7 n.s 99.0 Moderately correlated
206 THE1A-int 7 n.s 43.0 Weakly correlated
207 FLAM_A 6 n.s 74.0 Weakly correlated
208 HAL1ME 6 n.s 99.0 Moderately correlated
209 HERVIP10B3-int 6 * 28.9 Weakly correlated
210 HUERS-P3-int 6 n.s 43.0 Weakly correlated
211 L1M4a2 6 n.s 99.0 Moderately correlated
212 L1M4b 6 n.s 99.0 Moderately correlated
213 L1MCc 6 n.s 99.0 Moderately correlated
214 L1ME2 6 n.s 99.0 Moderately correlated
215 L3b 6 n.s 99.0 Moderately correlated
216 LOR1-int 6 n.s 74.0 Weakly correlated
217 LTR2752 6 *** 43.0 Weakly correlated
218 LTR5B 6 * 28.9 Weakly correlated
219 MER83 6 *** 43.0 Weakly correlated
220 MLT1A 6 n.s 99.0 Moderately correlated
221 MLT1E3 6 n.s 99.0 Moderately correlated
222 MSTB1 6 n.s 74.0 Weakly correlated
223 AluSq4 5 n.s 74.0 Weakly correlated
224 AluYf1 5 n.s 19.6 Weakly correlated
225 HERV3-int 5 n.s 28.9 Weakly correlated
226 L1MA7 5 n.s 87.0 Highly correlated
227 L1ME3C 5 n.s 99.0 Moderately correlated
228 L1ME4c 5 n.s 99.0 Moderately correlated
229 L1MEi 5 n.s 99.0 Moderately correlated
230 L4_A_Mam 5 n.s 99.0 Moderately correlated
231 LTR10E 5 *** 28.9 Weakly correlated
232 LTR14B 5 ** 28.9 Weakly correlated
233 LTR16B1 5 * 99.0 Moderately correlated
234 LTR18A 5 **** 43.0 Weakly correlated
235 LTR33A 5 n.s 99.0 Moderately correlated
236 LTR3B 5 **** 28.9 Weakly correlated
237 LTR40a 5 n.s 99.0 Moderately correlated
238 LTR41B 5 ** 99.0 Moderately correlated
239 LTR49 5 n.s 74.0 Weakly correlated
240 LTR5_Hs 5 n.s 0.0 Weakly correlated
241 LTR9B 5 * 43.0 Weakly correlated
242 MER41A 5 n.s 74.0 Weakly correlated
243 MER57C2 5 *** 87.0 Highly correlated
244 MER66A 5 *** 43.0 Weakly correlated
245 MLT1E1A 5 n.s 99.0 Moderately correlated
246 X9_LINE 5 **** 319.0 Weakly correlated
247 AluYa5 4 n.s 15.2 Weakly correlated
248 AluYc3 4 ** 74.0 Weakly correlated
249 AluYe5 4 n.s 74.0 Weakly correlated
250 AluYk2 4 * 19.6 Weakly correlated
251 ERV3-16A3_LTR 4 * 99.0 Moderately correlated
252 FAM 4 n.s 87.0 Highly correlated
253 HAL1M8 4 n.s 99.0 Moderately correlated
254 HERV-Fc1-int 4 **** 8.6 Weakly correlated
255 HERV1_I-int 4 ** 43.0 Weakly correlated
256 HERV9-int 4 n.s 28.9 Weakly correlated
257 HERVP71A-int 4 * 43.0 Weakly correlated
258 HUERS-P2-int 4 * 43.0 Weakly correlated
259 HUERS-P3b-int 4 n.s 43.0 Weakly correlated
260 L1M4a1 4 n.s 99.0 Moderately correlated
261 L1M6 4 n.s 99.0 Moderately correlated
262 L1M8 4 n.s 99.0 Moderately correlated
263 L1ME3D 4 n.s 99.0 Moderately correlated
264 L1ME3F 4 n.s 99.0 Moderately correlated
265 L1P3 4 n.s 74.0 Weakly correlated
266 LTR104_Mam 4 n.s 99.0 Moderately correlated
267 LTR10B2 4 **** 28.9 Weakly correlated
268 LTR10C 4 * 28.9 Weakly correlated
269 LTR16C 4 n.s 99.0 Moderately correlated
270 LTR28C 4 * 43.0 Weakly correlated
271 LTR31 4 *** 74.0 Weakly correlated
272 LTR32 4 n.s 43.0 Weakly correlated
273 LTR38-int 4 **** 74.0 Weakly correlated
274 LTR4 4 **** 28.9 Weakly correlated
275 LTR50 4 n.s 99.0 Moderately correlated
276 LTR8A 4 n.s 43.0 Weakly correlated
277 LTR9C 4 *** 43.0 Weakly correlated
278 MER21C 4 n.s 99.0 Moderately correlated
279 MER34A1 4 * 99.0 Moderately correlated
280 MER39B 4 n.s 74.0 Weakly correlated
281 MER41-int 4 n.s 74.0 Weakly correlated
282 MER41D 4 ** 74.0 Weakly correlated
283 MER51A 4 n.s 43.0 Weakly correlated
284 MER57-int 4 n.s 87.0 Highly correlated
285 MER67B 4 ** 99.0 Moderately correlated
286 MER74B 4 n.s 99.0 Moderately correlated
287 MLT1E2 4 n.s 99.0 Moderately correlated
288 MLT1G 4 n.s 99.0 Moderately correlated
289 MLT1H1 4 n.s 99.0 Moderately correlated
290 MLT1J1 4 n.s 99.0 Moderately correlated
291 PRIMA41-int 4 n.s 74.0 Weakly correlated
292 AluSq10 3 n.s 74.0 Weakly correlated
293 AluYe6 3 *** 74.0 Weakly correlated
294 AluYk11 3 ** 15.2 Weakly correlated
295 AmnSINE1 3 n.s 319.0 Weakly correlated
296 HERV16-int 3 n.s 99.0 Moderately correlated
297 HERV30-int 3 * 28.9 Weakly correlated
298 HERVE_a-int 3 n.s 28.9 Weakly correlated
299 HERVK14C-int 3 * 28.9 Weakly correlated
300 HERVL40-int 3 n.s 99.0 Moderately correlated
301 HUERS-P1-int 3 n.s 43.0 Weakly correlated
302 L1M3e 3 n.s 99.0 Moderately correlated
303 L1M4c 3 n.s 99.0 Moderately correlated
304 L1M7 3 n.s 99.0 Moderately correlated
305 L1MA5 3 n.s 87.0 Highly correlated
306 L1MA5A 3 n.s 87.0 Highly correlated
307 L1ME3E 3 n.s 99.0 Moderately correlated
308 L1P4 3 n.s 74.0 Weakly correlated
309 L1PA12 3 n.s 74.0 Weakly correlated
310 L1PB3 3 n.s 74.0 Weakly correlated
311 LTR12B 3 n.s 28.9 Weakly correlated
312 LTR16A 3 n.s 99.0 Moderately correlated
313 LTR16D 3 n.s 99.0 Moderately correlated
314 LTR16D2 3 ** 99.0 Moderately correlated
315 LTR1D 3 n.s 43.0 Weakly correlated
316 LTR26 3 n.s 74.0 Weakly correlated
317 LTR26C 3 ** 0.0 Weakly correlated
318 LTR38B 3 ** 74.0 Weakly correlated
319 LTR45 3 *** 99.0 Moderately correlated
320 LTR45C 3 * 99.0 Moderately correlated
321 LTR52-int 3 ** 99.0 Moderately correlated
322 LTR53-int 3 * 99.0 Moderately correlated
323 LTR5A 3 n.s 19.6 Weakly correlated
324 LTR82A 3 n.s 99.0 Moderately correlated
325 LTR82B 3 n.s 99.0 Moderately correlated
326 LTR86B2 3 *** 99.0 Moderately correlated
327 LTR88b 3 n.s 99.0 Moderately correlated
328 LTR8B 3 n.s 43.0 Weakly correlated
329 MER11A 3 n.s 28.9 Weakly correlated
330 MER31B 3 n.s 99.0 Moderately correlated
331 MER39 3 n.s 74.0 Weakly correlated
332 MER48 3 ** 28.9 Weakly correlated
333 MER51E 3 ** 43.0 Weakly correlated
334 MER52-int 3 n.s 99.0 Moderately correlated
335 MER65-int 3 n.s 87.0 Highly correlated
336 MER66-int 3 n.s 43.0 Weakly correlated
337 MER68-int 3 * 99.0 Moderately correlated
338 MER72 3 n.s 43.0 Weakly correlated
339 MER76 3 n.s 99.0 Moderately correlated
340 MER77 3 n.s 99.0 Moderately correlated
341 MLT1H-int 3 n.s 99.0 Moderately correlated
342 MLT2C1 3 n.s 99.0 Moderately correlated
343 MSTB-int 3 n.s 43.0 Weakly correlated
344 MSTD-int 3 n.s 74.0 Weakly correlated
345 PABL_A-int 3 n.s 74.0 Weakly correlated
346 AluYh7 2 *** 0.0 Weakly correlated
347 AluYh9 2 **** 15.2 Weakly correlated
348 AluYi6 2 * 15.2 Weakly correlated
349 AluYk3 2 n.s 19.6 Weakly correlated
350 HERV15-int 2 n.s 28.9 Weakly correlated
351 HERVI-int 2 n.s 28.9 Weakly correlated
352 HERVK-int 2 n.s 28.9 Weakly correlated
353 HERVKC4-int 2 * 28.9 Weakly correlated
354 HERVS71-int 2 n.s 28.9 Weakly correlated
355 L1M2a1 2 * 79.0 Weakly correlated
356 L1MA1 2 n.s 74.0 Weakly correlated
357 L1MC 2 n.s 99.0 Moderately correlated
358 L1MEh 2 n.s 99.0 Moderately correlated
359 L1PA15-16 2 n.s 74.0 Weakly correlated
360 L1PB 2 n.s 74.0 Weakly correlated
361 L1PBa1 2 n.s 74.0 Weakly correlated
362 L1PBb 2 n.s 74.0 Weakly correlated
363 L4_C_Mam 2 n.s 99.0 Moderately correlated
364 LTR1 2 n.s 43.0 Weakly correlated
365 LTR101_Mam 2 n.s 99.0 Moderately correlated
366 LTR102_Mam 2 n.s 99.0 Moderately correlated
367 LTR13A 2 n.s 28.9 Weakly correlated
368 LTR16E1 2 n.s 99.0 Moderately correlated
369 LTR18B 2 n.s 43.0 Weakly correlated
370 LTR18C 2 *** 43.0 Weakly correlated
371 LTR1A1 2 n.s 43.0 Weakly correlated
372 LTR1B 2 n.s 43.0 Weakly correlated
373 LTR1C1 2 ** 43.0 Weakly correlated
374 LTR22B 2 * 28.9 Weakly correlated
375 LTR26E 2 ** 74.0 Weakly correlated
376 LTR28 2 * 43.0 Weakly correlated
377 LTR2C 2 * 19.6 Weakly correlated
378 LTR35A 2 ** 43.0 Weakly correlated
379 LTR37B 2 n.s 99.0 Moderately correlated
380 LTR3A 2 * 28.9 Weakly correlated
381 LTR41C 2 n.s 99.0 Moderately correlated
382 LTR42 2 * 74.0 Weakly correlated
383 LTR43 2 n.s 74.0 Weakly correlated
384 LTR43-int 2 * 74.0 Weakly correlated
385 LTR43B 2 * 74.0 Weakly correlated
386 LTR46 2 * 43.0 Weakly correlated
387 LTR47A 2 n.s 74.0 Weakly correlated
388 LTR49-int 2 n.s 74.0 Weakly correlated
389 LTR54B 2 n.s 74.0 Weakly correlated
390 LTR62 2 n.s 74.0 Weakly correlated
391 LTR75B 2 ** 99.0 Moderately correlated
392 LTR81C 2 n.s 99.0 Moderately correlated
393 LTR83 2 n.s 99.0 Moderately correlated
394 LTR86A1 2 n.s 99.0 Moderately correlated
395 LTR87 2 n.s 99.0 Moderately correlated
396 MER101B 2 * 87.0 Highly correlated
397 MER11C 2 n.s 19.6 Weakly correlated
398 MER21-int 2 n.s 99.0 Moderately correlated
399 MER21A 2 n.s 74.0 Weakly correlated
400 MER21B 2 n.s 99.0 Moderately correlated
401 MER34 2 n.s 87.0 Highly correlated
402 MER34-int 2 n.s 99.0 Moderately correlated
403 MER34A 2 n.s 99.0 Moderately correlated
404 MER34B 2 n.s 87.0 Highly correlated
405 MER50C 2 ** 43.0 Weakly correlated
406 MER52C 2 n.s 74.0 Weakly correlated
407 MER57A1 2 n.s 43.0 Weakly correlated
408 MER57E1 2 n.s 87.0 Highly correlated
409 MER61A 2 n.s 43.0 Weakly correlated
410 MER61E 2 n.s 43.0 Weakly correlated
411 MER65A 2 n.s 74.0 Weakly correlated
412 MER66C 2 n.s 43.0 Weakly correlated
413 MER68 2 n.s 99.0 Moderately correlated
414 MER70-int 2 n.s 99.0 Moderately correlated
415 MER77B 2 n.s 99.0 Moderately correlated
416 MER89 2 n.s 99.0 Moderately correlated
417 MER90 2 n.s 99.0 Moderately correlated
418 MER90a 2 n.s 99.0 Moderately correlated
419 MER9a3 2 n.s 28.9 Weakly correlated
420 MLT1E 2 n.s 99.0 Moderately correlated
421 MLT1E1A-int 2 ** 99.0 Moderately correlated
422 MLT1J2-int 2 n.s 99.0 Moderately correlated
423 MLT1O 2 n.s 99.0 Moderately correlated
424 MLT2C2 2 n.s 99.0 Moderately correlated
425 MamGypLTR1b 2 n.s 99.0 Moderately correlated
426 MamGypsy2-I 2 n.s 99.0 Moderately correlated
427 PABL_A 2 n.s 43.0 Weakly correlated
428 AluYb8 1 n.s 15.2 Weakly correlated
429 AluYg6 1 n.s 15.2 Weakly correlated
430 CR1-13_AMi 1 ** 319.0 Weakly correlated
431 CR1-16_AMi 1 n.s 319.0 Weakly correlated
432 ERV24_Prim-int 1 n.s 74.0 Weakly correlated
433 ERVL-int 1 n.s 99.0 Moderately correlated
434 HAL1b 1 n.s 99.0 Moderately correlated
435 HERV-Fc1_LTR1 1 *** 15.2 Weakly correlated
436 HERV-Fc2-int 1 ** 15.2 Weakly correlated
437 HERV4_I-int 1 n.s 43.0 Weakly correlated
438 HERV9N-int 1 n.s 19.6 Weakly correlated
439 HERVFH19-int 1 n.s 43.0 Weakly correlated
440 Harlequin-int 1 n.s 74.0 Weakly correlated
441 L1M2c 1 n.s 87.0 Highly correlated
442 L1M3a 1 n.s 99.0 Moderately correlated
443 L1M3b 1 n.s 99.0 Moderately correlated
444 L1MA10 1 n.s 99.0 Moderately correlated
445 L1MCb 1 n.s 99.0 Moderately correlated
446 L1MDb 1 n.s 99.0 Moderately correlated
447 L1MEb 1 n.s 99.0 Moderately correlated
448 L1P4a 1 n.s 74.0 Weakly correlated
449 L1PA14 1 n.s 74.0 Weakly correlated
450 L4_B_Mam 1 n.s 99.0 Moderately correlated
451 LFSINE_Vert 1 n.s 319.0 Weakly correlated
452 LTR06 1 * 74.0 Weakly correlated
453 LTR103b_Mam 1 n.s 99.0 Moderately correlated
454 LTR10B 1 * 28.9 Weakly correlated
455 LTR13_ 1 * 28.9 Weakly correlated
456 LTR14A 1 * 28.9 Weakly correlated
457 LTR16 1 n.s 99.0 Moderately correlated
458 LTR16A1 1 n.s 99.0 Moderately correlated
459 LTR16A2 1 n.s 99.0 Moderately correlated
460 LTR19A 1 n.s 43.0 Weakly correlated
461 LTR19C 1 n.s 43.0 Weakly correlated
462 LTR1C3 1 * 43.0 Weakly correlated
463 LTR1F1 1 n.s 43.0 Weakly correlated
464 LTR2 1 n.s 28.9 Weakly correlated
465 LTR22C0 1 * 28.9 Weakly correlated
466 LTR25 1 n.s 43.0 Weakly correlated
467 LTR25-int 1 n.s 43.0 Weakly correlated
468 LTR27B 1 n.s 43.0 Weakly correlated
469 LTR27C 1 n.s 43.0 Weakly correlated
470 LTR28B 1 n.s 43.0 Weakly correlated
471 LTR3 1 * 28.9 Weakly correlated
472 LTR33C 1 n.s 99.0 Moderately correlated
473 LTR36 1 n.s 74.0 Weakly correlated
474 LTR37-int 1 n.s 99.0 Moderately correlated
475 LTR48B 1 n.s 74.0 Weakly correlated
476 LTR57 1 n.s 74.0 Weakly correlated
477 LTR60B 1 n.s 74.0 Weakly correlated
478 LTR64 1 n.s 74.0 Weakly correlated
479 LTR65 1 n.s 99.0 Moderately correlated
480 LTR6B 1 n.s 19.6 Weakly correlated
481 LTR7 1 n.s 19.6 Weakly correlated
482 LTR71A 1 n.s 43.0 Weakly correlated
483 LTR81A 1 n.s 99.0 Moderately correlated
484 LTR88c 1 n.s 99.0 Moderately correlated
485 LTR9A1 1 n.s 43.0 Weakly correlated
486 LTR9D 1 n.s 43.0 Weakly correlated
487 MER110 1 n.s 99.0 Moderately correlated
488 MER110-int 1 n.s 99.0 Moderately correlated
489 MER11B 1 n.s 19.6 Weakly correlated
490 MER11D 1 n.s 19.6 Weakly correlated
491 MER31-int 1 n.s 99.0 Moderately correlated
492 MER4-int 1 n.s 74.0 Weakly correlated
493 MER4B-int 1 n.s 99.0 Moderately correlated
494 MER51B 1 n.s 43.0 Weakly correlated
495 MER57B1 1 n.s 43.0 Weakly correlated
496 MER57B2 1 n.s 43.0 Weakly correlated
497 MER74A 1 n.s 99.0 Moderately correlated
498 MER92-int 1 n.s 99.0 Moderately correlated
499 MER92B 1 n.s 99.0 Moderately correlated
500 MLT1A0-int 1 n.s 99.0 Moderately correlated
501 MLT1A1-int 1 n.s 87.0 Highly correlated
502 MLT1B-int 1 n.s 99.0 Moderately correlated
503 MLT1D-int 1 n.s 99.0 Moderately correlated
504 MLT1F-int 1 n.s 99.0 Moderately correlated
505 MLT1G3-int 1 n.s 99.0 Moderately correlated
506 MLT1H1-int 1 n.s 99.0 Moderately correlated
507 MLT1I-int 1 n.s 99.0 Moderately correlated
508 MLT2A2 1 n.s 74.0 Weakly correlated
509 MLT2B2 1 n.s 99.0 Moderately correlated
510 MSTB2-int 1 n.s 74.0 Weakly correlated
511 MamGypLTR2b 1 n.s 99.0 Moderately correlated
512 Mam_R4 1 n.s 99.0 Moderately correlated
513 Plat_L3 1 n.s 99.0 Moderately correlated
514 PrimLTR79 1 * 74.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 56 n.s 99.0 Moderately correlated
2 HERVH-int 55 ** 28.9 Weakly correlated
3 AluY 51 n.s 74.0 Weakly correlated
4 L1PA5 47 n.s 19.6 Weakly correlated
5 L1PA4 37 n.s 19.6 Weakly correlated
6 AluSx1 36 n.s 74.0 Weakly correlated
7 AluJb 34 n.s 74.0 Weakly correlated
8 AluSx 33 n.s 74.0 Weakly correlated
9 AluSz 33 n.s 74.0 Weakly correlated
10 L1PA3 31 n.s 19.6 Weakly correlated
11 L1PA7 30 n.s 74.0 Weakly correlated
12 L2c 30 n.s 99.0 Moderately correlated
13 AluSp 29 n.s 74.0 Weakly correlated
14 LTR12C 29 n.s 19.6 Weakly correlated
15 MIRb 28 n.s 99.0 Moderately correlated
16 LTR12D 25 **** 19.6 Weakly correlated
17 L2b 20 n.s 99.0 Moderately correlated
18 MER50 20 **** 43.0 Weakly correlated
19 L2 18 n.s 99.0 Moderately correlated
20 MIR 17 n.s 99.0 Moderately correlated
21 L1MB3 16 n.s 99.0 Moderately correlated
22 L1PA16 16 n.s 74.0 Weakly correlated
23 L1PB1 16 n.s 74.0 Weakly correlated
24 AluSq2 15 n.s 74.0 Weakly correlated
25 HERVL-int 15 n.s 74.0 Weakly correlated
26 L1PA6 15 n.s 28.9 Weakly correlated
27 MLT1C 15 n.s 94.0 Moderately correlated
28 AluJr 14 n.s 74.0 Weakly correlated
29 L1M5 14 n.s 99.0 Moderately correlated
30 MLT1D 14 n.s 99.0 Moderately correlated
31 SVA_B 14 **** 15.2 Weakly correlated
32 L1PA10 13 n.s 74.0 Weakly correlated
33 L1PA11 13 n.s 74.0 Weakly correlated
34 MLT1A1 13 n.s 87.0 Highly correlated
35 AluSx3 12 n.s 74.0 Weakly correlated
36 L1PA8 12 n.s 74.0 Weakly correlated
37 HERVH48-int 11 **** 28.9 Weakly correlated
38 L1PA15 11 n.s 74.0 Weakly correlated
39 LTR17 11 *** 28.9 Weakly correlated
40 MIRc 11 n.s 99.0 Moderately correlated
41 AluSz6 10 n.s 74.0 Weakly correlated
42 L1PA13 10 n.s 74.0 Weakly correlated
43 L3 10 n.s 99.0 Moderately correlated
44 LOR1b 10 **** 74.0 Weakly correlated
45 L1ME1 9 n.s 99.0 Moderately correlated
46 L1PA2 9 n.s 15.2 Weakly correlated
47 L1PREC2 9 n.s 43.0 Weakly correlated
48 MLT1F2 9 n.s 99.0 Moderately correlated
49 AluJo 8 n.s 74.0 Weakly correlated
50 AluSc8 8 n.s 74.0 Weakly correlated
51 L1MA4 8 n.s 87.0 Highly correlated
52 L1PA17 8 n.s 74.0 Weakly correlated
53 LTR10F 8 **** 28.9 Weakly correlated
54 MLT1G1 8 n.s 99.0 Moderately correlated
55 AluSc 7 n.s 74.0 Weakly correlated
56 HERVK9-int 7 n.s 28.9 Weakly correlated
57 L1MC1 7 n.s 99.0 Moderately correlated
58 L1ME3A 7 n.s 99.0 Moderately correlated
59 LTR10A 7 **** 28.9 Weakly correlated
60 LTR10G 7 **** 28.9 Weakly correlated
61 MLT1I 7 n.s 99.0 Moderately correlated
62 MLT1K 7 n.s 99.0 Moderately correlated
63 THE1B-int 7 n.s 43.0 Weakly correlated
64 L1M1 6 n.s 74.0 Weakly correlated
65 L1MB2 6 n.s 99.0 Moderately correlated
66 L1MD2 6 n.s 99.0 Moderately correlated
67 MIR3 6 n.s 99.0 Moderately correlated
68 MLT1A0 6 n.s 99.0 Moderately correlated
69 MSTD 6 n.s 74.0 Weakly correlated
70 MamRTE1 6 n.s 99.0 Moderately correlated
71 AluSg 5 n.s 74.0 Weakly correlated
72 ERVL-E-int 5 n.s 99.0 Moderately correlated
73 HERVL18-int 5 * 43.0 Weakly correlated
74 L1M2 5 n.s 99.0 Moderately correlated
75 L1M4 5 n.s 99.0 Moderately correlated
76 L1MA3 5 n.s 74.0 Weakly correlated
77 L1MA4A 5 n.s 87.0 Highly correlated
78 L1MA6 5 n.s 87.0 Highly correlated
79 L1MA9 5 n.s 99.0 Moderately correlated
80 L1MB1 5 n.s 99.0 Moderately correlated
81 L1MC3 5 n.s 99.0 Moderately correlated
82 L1MC5a 5 n.s 99.0 Moderately correlated
83 L1MD3 5 n.s 99.0 Moderately correlated
84 L1ME3 5 n.s 99.0 Moderately correlated
85 L1MEc 5 n.s 99.0 Moderately correlated
86 L1MEf 5 n.s 99.0 Moderately correlated
87 L1PB2 5 n.s 74.0 Weakly correlated
88 MER49 5 n.s 43.0 Weakly correlated
89 MER4D 5 n.s 74.0 Weakly correlated
90 MER57D 5 *** 87.0 Highly correlated
91 MLT1B 5 n.s 99.0 Moderately correlated
92 MLT1F 5 n.s 99.0 Moderately correlated
93 MLT1H 5 n.s 99.0 Moderately correlated
94 MSTB 5 n.s 43.0 Weakly correlated
95 THE1A 5 n.s 43.0 Weakly correlated
96 THE1D-int 5 n.s 28.9 Weakly correlated
97 AluSq 4 n.s 74.0 Weakly correlated
98 HAL1 4 n.s 99.0 Moderately correlated
99 L1MA2 4 n.s 74.0 Weakly correlated
100 L1MA8 4 n.s 87.0 Highly correlated
101 L1MB7 4 n.s 99.0 Moderately correlated
102 L1MB8 4 n.s 99.0 Moderately correlated
103 L1MC4a 4 n.s 99.0 Moderately correlated
104 L1MD1 4 n.s 99.0 Moderately correlated
105 L1ME3Cz 4 n.s 99.0 Moderately correlated
106 L1ME4b 4 n.s 99.0 Moderately correlated
107 L1PB4 4 n.s 99.0 Moderately correlated
108 LOR1a 4 n.s 74.0 Weakly correlated
109 LTR27E 4 ** 43.0 Weakly correlated
110 LTR30 4 *** 28.9 Weakly correlated
111 LTR67B 4 n.s 99.0 Moderately correlated
112 MLT1J 4 n.s 99.0 Moderately correlated
113 MLT1L 4 n.s 99.0 Moderately correlated
114 MSTC 4 n.s 74.0 Weakly correlated
115 THE1D 4 n.s 43.0 Weakly correlated
116 AluJr4 3 n.s 74.0 Weakly correlated
117 AluSc5 3 n.s 74.0 Weakly correlated
118 AluSg7 3 n.s 74.0 Weakly correlated
119 HERVIP10FH-int 3 n.s 28.9 Weakly correlated
120 HERVK14-int 3 n.s 28.9 Weakly correlated
121 HERVK22-int 3 n.s 43.0 Weakly correlated
122 HERVK3-int 3 n.s 28.9 Weakly correlated
123 L1M4a2 3 n.s 99.0 Moderately correlated
124 L1MB5 3 n.s 99.0 Moderately correlated
125 L1MC2 3 n.s 99.0 Moderately correlated
126 L1MC4 3 n.s 99.0 Moderately correlated
127 L1MDa 3 n.s 99.0 Moderately correlated
128 L1ME2z 3 n.s 99.0 Moderately correlated
129 L1ME3B 3 n.s 99.0 Moderately correlated
130 L1MEd 3 n.s 99.0 Moderately correlated
131 L1PB3 3 n.s 74.0 Weakly correlated
132 L1PBa 3 n.s 74.0 Weakly correlated
133 LTR10E 3 * 28.9 Weakly correlated
134 LTR12 3 n.s 28.9 Weakly correlated
135 LTR13 3 n.s 19.6 Weakly correlated
136 LTR16E2 3 n.s 99.0 Moderately correlated
137 LTR56 3 n.s 74.0 Weakly correlated
138 LTR5B 3 n.s 28.9 Weakly correlated
139 LTR5_Hs 3 n.s 0.0 Weakly correlated
140 LTR9 3 n.s 43.0 Weakly correlated
141 MER41-int 3 n.s 74.0 Weakly correlated
142 MER52A 3 n.s 74.0 Weakly correlated
143 MER57A-int 3 n.s 43.0 Weakly correlated
144 MLT1F1 3 n.s 99.0 Moderately correlated
145 MLT1G3 3 n.s 99.0 Moderately correlated
146 MLT1H2 3 n.s 99.0 Moderately correlated
147 MLT1N2 3 n.s 99.0 Moderately correlated
148 MLT2F 3 n.s 99.0 Moderately correlated
149 MSTA 3 n.s 43.0 Weakly correlated
150 MSTA-int 3 n.s 43.0 Weakly correlated
151 THE1C 3 n.s 43.0 Weakly correlated
152 AluSg4 2 n.s 74.0 Weakly correlated
153 AluYc 2 n.s 74.0 Weakly correlated
154 AluYh3 2 n.s 15.2 Weakly correlated
155 AluYm1 2 n.s 19.6 Weakly correlated
156 AmnSINE1 2 n.s 319.0 Weakly correlated
157 ERV3-16A3_I-int 2 n.s 99.0 Moderately correlated
158 ERVL-B4-int 2 n.s 99.0 Moderately correlated
159 FLAM_C 2 n.s 74.0 Weakly correlated
160 HERV17-int 2 n.s 28.9 Weakly correlated
161 HERV1_I-int 2 * 43.0 Weakly correlated
162 HERVK13-int 2 * 19.6 Weakly correlated
163 HERVK14C-int 2 n.s 28.9 Weakly correlated
164 HERVKC4-int 2 * 28.9 Weakly correlated
165 HERVP71A-int 2 n.s 43.0 Weakly correlated
166 HUERS-P2-int 2 n.s 43.0 Weakly correlated
167 L1HS 2 n.s 8.6 Weakly correlated
168 L1M3c 2 n.s 99.0 Moderately correlated
169 L1M7 2 n.s 99.0 Moderately correlated
170 L1MA5 2 n.s 87.0 Highly correlated
171 L1MA7 2 n.s 87.0 Highly correlated
172 L1MB4 2 n.s 99.0 Moderately correlated
173 L1MD 2 n.s 99.0 Moderately correlated
174 L1ME2 2 n.s 99.0 Moderately correlated
175 L1ME3C 2 n.s 99.0 Moderately correlated
176 L1ME3F 2 n.s 99.0 Moderately correlated
177 L1ME3G 2 n.s 99.0 Moderately correlated
178 L1ME4a 2 n.s 99.0 Moderately correlated
179 L1MEg 2 n.s 99.0 Moderately correlated
180 L1MEi 2 n.s 99.0 Moderately correlated
181 L1P1 2 n.s 19.6 Weakly correlated
182 L1PA12 2 n.s 74.0 Weakly correlated
183 L1PA8A 2 n.s 74.0 Weakly correlated
184 L1PBa1 2 n.s 74.0 Weakly correlated
185 LOR1-int 2 n.s 74.0 Weakly correlated
186 LTR10B1 2 ** 28.9 Weakly correlated
187 LTR10B2 2 ** 28.9 Weakly correlated
188 LTR12_ 2 n.s 28.9 Weakly correlated
189 LTR16B2 2 n.s 99.0 Moderately correlated
190 LTR16C 2 n.s 99.0 Moderately correlated
191 LTR1A2 2 n.s 43.0 Weakly correlated
192 LTR26 2 n.s 74.0 Weakly correlated
193 LTR2752 2 n.s 43.0 Weakly correlated
194 LTR40a 2 n.s 99.0 Moderately correlated
195 LTR41 2 n.s 99.0 Moderately correlated
196 LTR50 2 n.s 99.0 Moderately correlated
197 LTR5A 2 n.s 19.6 Weakly correlated
198 MER21C 2 n.s 99.0 Moderately correlated
199 MER39 2 n.s 74.0 Weakly correlated
200 MER51A 2 n.s 43.0 Weakly correlated
201 MER52D 2 n.s 74.0 Weakly correlated
202 MER57C2 2 n.s 87.0 Highly correlated
203 MER66B 2 n.s 43.0 Weakly correlated
204 MIR1_Amn 2 n.s 319.0 Weakly correlated
205 MLT1A 2 n.s 99.0 Moderately correlated
206 MLT1G 2 n.s 99.0 Moderately correlated
207 MLT1H1 2 n.s 99.0 Moderately correlated
208 MLT1J1 2 n.s 99.0 Moderately correlated
209 MLT1J2 2 n.s 99.0 Moderately correlated
210 MSTB1 2 n.s 74.0 Weakly correlated
211 MSTB2 2 n.s 74.0 Weakly correlated
212 MSTD-int 2 n.s 74.0 Weakly correlated
213 MamSINE1 2 n.s 99.0 Moderately correlated
214 SVA_A 2 n.s 19.6 Weakly correlated
215 THE1B 2 n.s 43.0 Weakly correlated
216 THE1C-int 2 n.s 43.0 Weakly correlated
217 X9_LINE 2 ** 319.0 Weakly correlated
218 AluSq4 1 n.s 74.0 Weakly correlated
219 AluYc3 1 n.s 74.0 Weakly correlated
220 AluYe6 1 n.s 74.0 Weakly correlated
221 AluYh9 1 ** 15.2 Weakly correlated
222 CR1-13_AMi 1 ** 319.0 Weakly correlated
223 CR1-16_AMi 1 n.s 319.0 Weakly correlated
224 ERV24_Prim-int 1 n.s 74.0 Weakly correlated
225 ERV3-16A3_LTR 1 n.s 99.0 Moderately correlated
226 ERVL-int 1 n.s 99.0 Moderately correlated
227 FAM 1 n.s 87.0 Highly correlated
228 FRAM 1 n.s 74.0 Weakly correlated
229 HAL1ME 1 n.s 99.0 Moderately correlated
230 HERV-Fc1-int 1 * 8.6 Weakly correlated
231 HERV-Fc2-int 1 ** 15.2 Weakly correlated
232 HERV15-int 1 n.s 28.9 Weakly correlated
233 HERV30-int 1 n.s 28.9 Weakly correlated
234 HERV9N-int 1 n.s 19.6 Weakly correlated
235 HERVFH19-int 1 n.s 43.0 Weakly correlated
236 HERVI-int 1 n.s 28.9 Weakly correlated
237 HERVIP10F-int 1 n.s 28.9 Weakly correlated
238 HERVK-int 1 n.s 28.9 Weakly correlated
239 HERVL40-int 1 n.s 99.0 Moderately correlated
240 HUERS-P1-int 1 n.s 43.0 Weakly correlated
241 HUERS-P3-int 1 n.s 43.0 Weakly correlated
242 HUERS-P3b-int 1 n.s 43.0 Weakly correlated
243 L1M2c 1 n.s 87.0 Highly correlated
244 L1M3 1 n.s 99.0 Moderately correlated
245 L1M3e 1 n.s 99.0 Moderately correlated
246 L1M4a1 1 n.s 99.0 Moderately correlated
247 L1M4b 1 n.s 99.0 Moderately correlated
248 L1M6 1 n.s 99.0 Moderately correlated
249 L1MA1 1 n.s 74.0 Weakly correlated
250 L1MA10 1 n.s 99.0 Moderately correlated
251 L1MA5A 1 n.s 87.0 Highly correlated
252 L1MC 1 n.s 99.0 Moderately correlated
253 L1MC5 1 n.s 99.0 Moderately correlated
254 L1MCa 1 n.s 99.0 Moderately correlated
255 L1MDb 1 n.s 99.0 Moderately correlated
256 L1ME3D 1 n.s 99.0 Moderately correlated
257 L1ME3E 1 n.s 99.0 Moderately correlated
258 L1MEb 1 n.s 99.0 Moderately correlated
259 L1MEh 1 n.s 99.0 Moderately correlated
260 L1P2 1 n.s 28.9 Weakly correlated
261 L1P3 1 n.s 74.0 Weakly correlated
262 L1PA14 1 n.s 74.0 Weakly correlated
263 L1PA15-16 1 n.s 74.0 Weakly correlated
264 L1PB 1 n.s 74.0 Weakly correlated
265 L4_A_Mam 1 n.s 99.0 Moderately correlated
266 LTR104_Mam 1 n.s 99.0 Moderately correlated
267 LTR10B 1 * 28.9 Weakly correlated
268 LTR12B 1 n.s 28.9 Weakly correlated
269 LTR12E 1 n.s 19.6 Weakly correlated
270 LTR12F 1 n.s 28.9 Weakly correlated
271 LTR14B 1 n.s 28.9 Weakly correlated
272 LTR16A 1 n.s 99.0 Moderately correlated
273 LTR16A1 1 n.s 99.0 Moderately correlated
274 LTR16B1 1 n.s 99.0 Moderately correlated
275 LTR16D 1 n.s 99.0 Moderately correlated
276 LTR16D2 1 n.s 99.0 Moderately correlated
277 LTR16E1 1 n.s 99.0 Moderately correlated
278 LTR1B 1 n.s 43.0 Weakly correlated
279 LTR1C3 1 * 43.0 Weakly correlated
280 LTR1D 1 n.s 43.0 Weakly correlated
281 LTR22B 1 n.s 28.9 Weakly correlated
282 LTR25-int 1 n.s 43.0 Weakly correlated
283 LTR26C 1 n.s 0.0 Weakly correlated
284 LTR3 1 * 28.9 Weakly correlated
285 LTR33 1 n.s 99.0 Moderately correlated
286 LTR33A 1 n.s 99.0 Moderately correlated
287 LTR35A 1 * 43.0 Weakly correlated
288 LTR36 1 n.s 74.0 Weakly correlated
289 LTR37B 1 n.s 99.0 Moderately correlated
290 LTR38-int 1 * 74.0 Weakly correlated
291 LTR40b 1 n.s 99.0 Moderately correlated
292 LTR42 1 n.s 74.0 Weakly correlated
293 LTR43 1 n.s 74.0 Weakly correlated
294 LTR43-int 1 n.s 74.0 Weakly correlated
295 LTR43B 1 n.s 74.0 Weakly correlated
296 LTR45 1 n.s 99.0 Moderately correlated
297 LTR45C 1 n.s 99.0 Moderately correlated
298 LTR49 1 n.s 74.0 Weakly correlated
299 LTR49-int 1 n.s 74.0 Weakly correlated
300 LTR53-int 1 n.s 99.0 Moderately correlated
301 LTR60B 1 n.s 74.0 Weakly correlated
302 LTR78 1 n.s 99.0 Moderately correlated
303 LTR81C 1 n.s 99.0 Moderately correlated
304 LTR82A 1 n.s 99.0 Moderately correlated
305 LTR86B2 1 n.s 99.0 Moderately correlated
306 LTR87 1 n.s 99.0 Moderately correlated
307 LTR8B 1 n.s 43.0 Weakly correlated
308 LTR9A1 1 n.s 43.0 Weakly correlated
309 LTR9B 1 n.s 43.0 Weakly correlated
310 MER110 1 n.s 99.0 Moderately correlated
311 MER21-int 1 n.s 99.0 Moderately correlated
312 MER31B 1 n.s 99.0 Moderately correlated
313 MER34-int 1 n.s 99.0 Moderately correlated
314 MER34A1 1 n.s 99.0 Moderately correlated
315 MER41B 1 n.s 74.0 Weakly correlated
316 MER4B-int 1 n.s 99.0 Moderately correlated
317 MER50B 1 n.s 43.0 Weakly correlated
318 MER50C 1 * 43.0 Weakly correlated
319 MER52-int 1 n.s 99.0 Moderately correlated
320 MER57-int 1 n.s 87.0 Highly correlated
321 MER57A1 1 n.s 43.0 Weakly correlated
322 MER57E1 1 n.s 87.0 Highly correlated
323 MER61A 1 n.s 43.0 Weakly correlated
324 MER65-int 1 n.s 87.0 Highly correlated
325 MER66A 1 n.s 43.0 Weakly correlated
326 MER67B 1 n.s 99.0 Moderately correlated
327 MER68 1 n.s 99.0 Moderately correlated
328 MER68-int 1 n.s 99.0 Moderately correlated
329 MER70-int 1 n.s 99.0 Moderately correlated
330 MER70B 1 n.s 87.0 Highly correlated
331 MER72 1 n.s 43.0 Weakly correlated
332 MER74B 1 n.s 99.0 Moderately correlated
333 MER77 1 n.s 99.0 Moderately correlated
334 MER77B 1 n.s 99.0 Moderately correlated
335 MER89 1 n.s 99.0 Moderately correlated
336 MER90a 1 n.s 99.0 Moderately correlated
337 MLT1B-int 1 n.s 99.0 Moderately correlated
338 MLT1E1A 1 n.s 99.0 Moderately correlated
339 MLT1E3 1 n.s 99.0 Moderately correlated
340 MLT1H-int 1 n.s 99.0 Moderately correlated
341 MLT2C1 1 n.s 99.0 Moderately correlated
342 MSTB2-int 1 n.s 74.0 Weakly correlated
343 MamGypsy2-I 1 n.s 99.0 Moderately correlated
344 Mam_R4 1 n.s 99.0 Moderately correlated
345 PABL_A-int 1 n.s 74.0 Weakly correlated
346 Plat_L3 1 n.s 99.0 Moderately correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ALUJB 74.0 Weakly correlated
2 ALUJR 74.0 Weakly correlated
3 ALUSC 74.0 Weakly correlated
4 ALUSC8 74.0 Weakly correlated
5 ALUSX1 74.0 Weakly correlated
6 ALUSX3 74.0 Weakly correlated
7 ALUY 74.0 Weakly correlated
8 HERVH-INT 28.9 Weakly correlated
9 HERVH48-INT 28.9 Weakly correlated
10 HERVK9-INT 28.9 Weakly correlated
11 HERVL-INT 74.0 Weakly correlated
12 L1M1 74.0 Weakly correlated
13 L1M5 99.0 Moderately correlated
14 L1MA4 87.0 Highly correlated
15 L1MB2 99.0 Moderately correlated
16 L1MB3 99.0 Moderately correlated
17 L1MC1 99.0 Moderately correlated
18 L1ME3A 99.0 Moderately correlated
19 L1PA10 74.0 Weakly correlated
20 L1PA11 74.0 Weakly correlated
21 L1PA13 74.0 Weakly correlated
22 L1PA15 74.0 Weakly correlated
23 L1PA16 74.0 Weakly correlated
24 L1PA17 74.0 Weakly correlated
25 L1PA2 15.2 Weakly correlated
26 L1PA3 19.6 Weakly correlated
27 L1PA4 19.6 Weakly correlated
28 L1PA5 19.6 Weakly correlated
29 L1PA6 28.9 Weakly correlated
30 L1PA7 74.0 Weakly correlated
31 L1PA8 74.0 Weakly correlated
32 L1PB1 74.0 Weakly correlated
33 L1PREC2 43.0 Weakly correlated
34 L2 99.0 Moderately correlated
35 L2A 99.0 Moderately correlated
36 L2C 99.0 Moderately correlated
37 L3 99.0 Moderately correlated
38 LOR1B 74.0 Weakly correlated
39 LTR10G 28.9 Weakly correlated
40 LTR12C 19.6 Weakly correlated
41 LTR12D 19.6 Weakly correlated
42 LTR17 28.9 Weakly correlated
43 MER50 43.0 Weakly correlated
44 MLT1A0 99.0 Moderately correlated
45 MLT1A1 87.0 Highly correlated
46 MLT1C 94.0 Moderately correlated
47 MLT1F2 99.0 Moderately correlated
48 MLT1G1 99.0 Moderately correlated
49 MLT1I 99.0 Moderately correlated
50 MSTD 74.0 Weakly correlated
51 MAMRTE1 99.0 Moderately correlated
52 SVA_B 15.2 Weakly correlated