ZRdb KZFP & Repeats
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Human_ZNF468

  • Protein
    Zinc finger protein 468
  • Length
    522
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    74.0 Mya
  • Time of Changing in binding specificity
    28.9 Mya
  • Uniprot_ID
    Q5VIY5
  • NCBI_ID
    90333
Sequence:
MALPQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMLKTLSSTGQGNTEVIHTGTLHRQASHHIGEFCFHEIEKDIHGFEFQWKEDETNGHAAPMTEIKELAGSTGQHDQRHAGNKRIKDQLGSSFHLHLPEPHIFQSEGKIGNQVEKSINNASSVSTSQRICCRPKTHISNKYGNNSLHSSLLTQKWEVHMREKSFECIQSFKSFNCSSLLKKHQIIHLEEKQCKCDVCGKVFNQKRYLACHRRCHTGEKPYKCNECGKTFGHNSSLFIHKALHTGEKPYECEECDKVFSRKSHLERHKRIHTGEKPYKCKVCDEAFAYNSYLAKHTILHTGEKPYTCNECGKVFNRLSTLARHHRLHTGEKPYKCEECDKVFSRKSHLERHRRIHSGEKPYKCEECCKVFSRKSNLERHRRIHTGEKPYKCKVCDKAFQRDSHLAQHQRVHTGEKPYKCNECGKTFGQTSSLIIHRRLHTGEKPYKCNECGKTFSQMSSLVYHHRLHSGEKP
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 8..80
2 dec2h2 215..237
3 C2h2 243..265
4 C2h2 271..293
5 C2h2 299..321
6 C2h2 327..349
7 C2h2 355..377
8 C2h2 383..405
9 C2h2 411..433
10 C2h2 439..461
11 C2h2 467..489
12 C2h2 495..517
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
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Reverse:
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Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MER11A 299 **** 28.9 Highly correlated
2 LTR17 159 **** 28.9 Highly correlated
3 L2a 71 n.s 99.0 Weakly correlated
4 THE1B-int 64 **** 43.0 Moderately correlated
5 L2b 47 n.s 99.0 Weakly correlated
6 AluJb 45 n.s 74.0 Weakly correlated
7 MIRb 44 n.s 99.0 Weakly correlated
8 AluY 43 n.s 74.0 Weakly correlated
9 L2c 43 n.s 99.0 Weakly correlated
10 AluSz 36 n.s 74.0 Weakly correlated
11 MIR 36 n.s 99.0 Weakly correlated
12 THE1B 34 ** 43.0 Moderately correlated
13 AluSx1 33 n.s 74.0 Weakly correlated
14 MIR3 32 n.s 99.0 Weakly correlated
15 SVA_D 30 **** 15.2 Weakly correlated
16 AluSx 28 n.s 74.0 Weakly correlated
17 L2 26 n.s 99.0 Weakly correlated
18 THE1C-int 25 **** 43.0 Moderately correlated
19 AluJr 24 n.s 74.0 Weakly correlated
20 AluSq2 24 n.s 74.0 Weakly correlated
21 MIRc 24 n.s 99.0 Weakly correlated
22 MSTA-int 22 **** 43.0 Moderately correlated
23 AluSp 21 n.s 74.0 Weakly correlated
24 LTR12C 21 *** 19.6 Weakly correlated
25 MSTA 21 n.s 43.0 Moderately correlated
26 AluJo 19 n.s 74.0 Weakly correlated
27 LTR8 18 **** 43.0 Moderately correlated
28 THE1D-int 18 **** 28.9 Highly correlated
29 HERVK9-int 15 **** 28.9 Highly correlated
30 AluSz6 14 n.s 74.0 Weakly correlated
31 L1MB3 14 n.s 99.0 Weakly correlated
32 MSTB 14 ** 43.0 Moderately correlated
33 THE1A-int 14 *** 43.0 Moderately correlated
34 SVA_B 13 **** 15.2 Weakly correlated
35 L1PA7 12 n.s 74.0 Weakly correlated
36 L3 12 n.s 99.0 Weakly correlated
37 SVA_A 12 **** 19.6 Weakly correlated
38 THE1C 11 n.s 43.0 Moderately correlated
39 AluSc 10 n.s 74.0 Weakly correlated
40 AluSg 10 n.s 74.0 Weakly correlated
41 AluSx3 10 n.s 74.0 Weakly correlated
42 L1MB7 10 n.s 99.0 Weakly correlated
43 L1MDa 10 n.s 99.0 Weakly correlated
44 L1PA10 10 n.s 74.0 Weakly correlated
45 MLT1B 10 n.s 99.0 Weakly correlated
46 MLT1J 10 n.s 99.0 Weakly correlated
47 L1PB1 9 n.s 74.0 Weakly correlated
48 MER50 9 *** 43.0 Moderately correlated
49 MSTB1 9 * 74.0 Weakly correlated
50 AluJr4 8 n.s 74.0 Weakly correlated
51 FLAM_C 8 n.s 74.0 Weakly correlated
52 L1M5 8 n.s 99.0 Weakly correlated
53 L1MA9 8 n.s 99.0 Weakly correlated
54 LTR9B 8 **** 43.0 Moderately correlated
55 MLT1C 8 n.s 94.0 Weakly correlated
56 HAL1 7 n.s 99.0 Weakly correlated
57 L1MC4 7 n.s 99.0 Weakly correlated
58 L1PA16 7 n.s 74.0 Weakly correlated
59 L1PREC2 7 n.s 43.0 Moderately correlated
60 LTR33 7 n.s 99.0 Weakly correlated
61 LTR6A 7 **** 28.9 Highly correlated
62 MER51A 7 **** 43.0 Moderately correlated
63 MLT1D 7 n.s 99.0 Weakly correlated
64 SVA_F 7 ** 0.0 Weakly correlated
65 THE1D 7 n.s 43.0 Moderately correlated
66 FLAM_A 6 n.s 74.0 Weakly correlated
67 HERVE-int 6 ** 19.6 Weakly correlated
68 L1ME4b 6 n.s 99.0 Weakly correlated
69 L1MEc 6 n.s 99.0 Weakly correlated
70 L1PA12 6 n.s 74.0 Weakly correlated
71 L1PA3 6 n.s 19.6 Weakly correlated
72 L1PA4 6 n.s 19.6 Weakly correlated
73 L1PA8 6 n.s 74.0 Weakly correlated
74 LTR10A 6 **** 28.9 Highly correlated
75 LTR14C 6 **** 28.9 Highly correlated
76 LTR28C 6 **** 43.0 Moderately correlated
77 MER21A 6 ** 74.0 Weakly correlated
78 MER21C 6 n.s 99.0 Weakly correlated
79 MER4A1 6 ** 74.0 Weakly correlated
80 MER52A 6 n.s 74.0 Weakly correlated
81 MER72 6 **** 43.0 Moderately correlated
82 MIR1_Amn 6 * 319.0 Weakly correlated
83 AluSc8 5 n.s 74.0 Weakly correlated
84 L1M1 5 n.s 74.0 Weakly correlated
85 L1M4 5 n.s 99.0 Weakly correlated
86 L1MC1 5 n.s 99.0 Weakly correlated
87 L1MC5 5 n.s 99.0 Weakly correlated
88 L1MCa 5 n.s 99.0 Weakly correlated
89 L1ME1 5 n.s 99.0 Weakly correlated
90 L1MEd 5 n.s 99.0 Weakly correlated
91 L1P3 5 n.s 74.0 Weakly correlated
92 L1PA13 5 n.s 74.0 Weakly correlated
93 L1PA2 5 n.s 15.2 Weakly correlated
94 LTR16C 5 n.s 99.0 Weakly correlated
95 LTR2 5 *** 28.9 Highly correlated
96 LTR50 5 * 99.0 Weakly correlated
97 MER11B 5 ** 19.6 Weakly correlated
98 MER21B 5 n.s 99.0 Weakly correlated
99 AluSc5 4 n.s 74.0 Weakly correlated
100 HERVIP10FH-int 4 ** 28.9 Highly correlated
101 L1M4b 4 n.s 99.0 Weakly correlated
102 L1MA2 4 n.s 74.0 Weakly correlated
103 L1MB1 4 n.s 99.0 Weakly correlated
104 L1MC3 4 n.s 99.0 Weakly correlated
105 L1MDb 4 * 99.0 Weakly correlated
106 L1ME4a 4 n.s 99.0 Weakly correlated
107 L1PA8A 4 n.s 74.0 Weakly correlated
108 L1PB4 4 n.s 99.0 Weakly correlated
109 LTR1B 4 *** 43.0 Moderately correlated
110 MER52D 4 * 74.0 Weakly correlated
111 MER61-int 4 n.s 43.0 Moderately correlated
112 MER61A 4 *** 43.0 Moderately correlated
113 MLT1A0 4 n.s 99.0 Weakly correlated
114 MLT1A1 4 n.s 87.0 Weakly correlated
115 MLT1F2 4 n.s 99.0 Weakly correlated
116 MLT1G3 4 n.s 99.0 Weakly correlated
117 MLT1K 4 n.s 99.0 Weakly correlated
118 PrimLTR79 4 **** 74.0 Weakly correlated
119 SVA_C 4 ** 15.2 Weakly correlated
120 AluSg7 3 n.s 74.0 Weakly correlated
121 AluSx4 3 n.s 74.0 Weakly correlated
122 AluYa5 3 n.s 15.2 Weakly correlated
123 AluYc 3 n.s 74.0 Weakly correlated
124 ERVL-E-int 3 n.s 99.0 Weakly correlated
125 HAL1ME 3 n.s 99.0 Weakly correlated
126 HERVH-int 3 n.s 28.9 Highly correlated
127 HERVH48-int 3 ** 28.9 Highly correlated
128 HUERS-P2-int 3 ** 43.0 Moderately correlated
129 L1M6 3 n.s 99.0 Weakly correlated
130 L1MA3 3 n.s 74.0 Weakly correlated
131 L1MA4A 3 n.s 87.0 Weakly correlated
132 L1MA5A 3 n.s 87.0 Weakly correlated
133 L1MB2 3 n.s 99.0 Weakly correlated
134 L1MB5 3 n.s 99.0 Weakly correlated
135 L1MB8 3 n.s 99.0 Weakly correlated
136 L1MC5a 3 n.s 99.0 Weakly correlated
137 L1MD2 3 n.s 99.0 Weakly correlated
138 L1ME3Cz 3 n.s 99.0 Weakly correlated
139 L1MEg 3 n.s 99.0 Weakly correlated
140 L1PA15 3 n.s 74.0 Weakly correlated
141 L1PBa 3 n.s 74.0 Weakly correlated
142 LTR10F 3 ** 28.9 Highly correlated
143 LTR13 3 * 19.6 Weakly correlated
144 LTR16 3 n.s 99.0 Weakly correlated
145 LTR1D1 3 ** 43.0 Moderately correlated
146 LTR67B 3 n.s 99.0 Weakly correlated
147 LTR83 3 ** 99.0 Weakly correlated
148 MER11C 3 n.s 19.6 Weakly correlated
149 MER66B 3 * 43.0 Moderately correlated
150 MER92B 3 ** 99.0 Weakly correlated
151 MLT1A 3 n.s 99.0 Weakly correlated
152 MLT1F 3 n.s 99.0 Weakly correlated
153 MLT1F1 3 n.s 99.0 Weakly correlated
154 MLT1L 3 n.s 99.0 Weakly correlated
155 MSTB-int 3 n.s 43.0 Moderately correlated
156 MSTD 3 n.s 74.0 Weakly correlated
157 SVA_E 3 ** 0.0 Weakly correlated
158 THE1A 3 n.s 43.0 Moderately correlated
159 Alu 2 * 74.0 Weakly correlated
160 AluSg4 2 n.s 74.0 Weakly correlated
161 AluSq 2 n.s 74.0 Weakly correlated
162 AluYj4 2 n.s 0.0 Weakly correlated
163 AluYm1 2 n.s 19.6 Weakly correlated
164 ERV3-16A3_I-int 2 n.s 99.0 Weakly correlated
165 FAM 2 n.s 87.0 Weakly correlated
166 HERVFH21-int 2 ** 28.9 Highly correlated
167 HERVS71-int 2 n.s 28.9 Highly correlated
168 HUERS-P3-int 2 n.s 43.0 Moderately correlated
169 HUERS-P3b-int 2 n.s 43.0 Moderately correlated
170 L1MA8 2 n.s 87.0 Weakly correlated
171 L1MB4 2 n.s 99.0 Weakly correlated
172 L1MC 2 n.s 99.0 Weakly correlated
173 L1MC4a 2 n.s 99.0 Weakly correlated
174 L1MCc 2 n.s 99.0 Weakly correlated
175 L1MD1 2 n.s 99.0 Weakly correlated
176 L1ME2 2 n.s 99.0 Weakly correlated
177 L1ME3 2 n.s 99.0 Weakly correlated
178 L1ME3A 2 n.s 99.0 Weakly correlated
179 L1ME3B 2 n.s 99.0 Weakly correlated
180 L1ME3D 2 n.s 99.0 Weakly correlated
181 L1ME3E 2 n.s 99.0 Weakly correlated
182 L1ME3G 2 n.s 99.0 Weakly correlated
183 L1ME4c 2 n.s 99.0 Weakly correlated
184 L1PA11 2 n.s 74.0 Weakly correlated
185 L1PA17 2 n.s 74.0 Weakly correlated
186 L1PA6 2 n.s 28.9 Highly correlated
187 L2-3_Crp 2 n.s 431.0 Weakly correlated
188 L3b 2 n.s 99.0 Weakly correlated
189 L4_C_Mam 2 n.s 99.0 Weakly correlated
190 LTR10E 2 ** 28.9 Highly correlated
191 LTR12D 2 n.s 19.6 Weakly correlated
192 LTR16A1 2 n.s 99.0 Weakly correlated
193 LTR16E1 2 n.s 99.0 Weakly correlated
194 LTR1B0 2 *** 43.0 Moderately correlated
195 LTR1E 2 * 43.0 Moderately correlated
196 LTR1F1 2 ** 43.0 Moderately correlated
197 LTR1F2 2 ** 43.0 Moderately correlated
198 LTR41 2 n.s 99.0 Weakly correlated
199 LTR41C 2 * 99.0 Weakly correlated
200 LTR46-int 2 ** 74.0 Weakly correlated
201 LTR48B 2 n.s 74.0 Weakly correlated
202 LTR55 2 ** 99.0 Weakly correlated
203 LTR5_Hs 2 n.s 0.0 Weakly correlated
204 LTR84b 2 * 99.0 Weakly correlated
205 MER31B 2 n.s 99.0 Weakly correlated
206 MER34D 2 ** 74.0 Weakly correlated
207 MER4-int 2 n.s 74.0 Weakly correlated
208 MER41-int 2 n.s 74.0 Weakly correlated
209 MER41B 2 n.s 74.0 Weakly correlated
210 MER49 2 n.s 43.0 Moderately correlated
211 MER52-int 2 n.s 99.0 Weakly correlated
212 MER66C 2 ** 43.0 Moderately correlated
213 MER67C 2 n.s 99.0 Weakly correlated
214 MER68 2 n.s 99.0 Weakly correlated
215 MER74A 2 n.s 99.0 Weakly correlated
216 MER83 2 ** 43.0 Moderately correlated
217 MER87 2 *** 43.0 Moderately correlated
218 MER90a 2 n.s 99.0 Weakly correlated
219 MLT1E2 2 n.s 99.0 Weakly correlated
220 MLT1H 2 n.s 99.0 Weakly correlated
221 MLT1H1 2 n.s 99.0 Weakly correlated
222 MLT1I 2 n.s 99.0 Weakly correlated
223 MLT1J2 2 n.s 99.0 Weakly correlated
224 MLT1O 2 n.s 99.0 Weakly correlated
225 MLT2B4 2 n.s 99.0 Weakly correlated
226 MSTB2 2 n.s 74.0 Weakly correlated
227 MSTC 2 n.s 74.0 Weakly correlated
228 MamGypLTR1a 2 * 99.0 Weakly correlated
229 MamSINE1 2 n.s 99.0 Weakly correlated
230 AluYb8 1 n.s 15.2 Weakly correlated
231 AluYh9 1 *** 15.2 Weakly correlated
232 AluYk11 1 * 15.2 Weakly correlated
233 AluYk2 1 n.s 19.6 Weakly correlated
234 AluYk4 1 n.s 15.2 Weakly correlated
235 AmnSINE1 1 n.s 319.0 Weakly correlated
236 AmnSINE2 1 * 319.0 Weakly correlated
237 CR1_Mam 1 n.s 99.0 Weakly correlated
238 ERV3-16A3_LTR 1 n.s 99.0 Weakly correlated
239 ERVL-B4-int 1 n.s 99.0 Weakly correlated
240 HAL1M8 1 n.s 99.0 Weakly correlated
241 HAL1b 1 n.s 99.0 Weakly correlated
242 HERV17-int 1 n.s 28.9 Highly correlated
243 HERVFH19-int 1 * 43.0 Moderately correlated
244 HERVI-int 1 n.s 28.9 Highly correlated
245 HERVIP10B3-int 1 n.s 28.9 Highly correlated
246 HERVK-int 1 n.s 28.9 Highly correlated
247 HERVL18-int 1 n.s 43.0 Moderately correlated
248 HERVL40-int 1 n.s 99.0 Weakly correlated
249 L1M 1 * 74.0 Weakly correlated
250 L1M2 1 n.s 99.0 Weakly correlated
251 L1M3 1 n.s 99.0 Weakly correlated
252 L1M4c 1 n.s 99.0 Weakly correlated
253 L1M8 1 n.s 99.0 Weakly correlated
254 L1MA1 1 n.s 74.0 Weakly correlated
255 L1MA10 1 n.s 99.0 Weakly correlated
256 L1MA4 1 n.s 87.0 Weakly correlated
257 L1MA6 1 n.s 87.0 Weakly correlated
258 L1MA7 1 n.s 87.0 Weakly correlated
259 L1MC2 1 n.s 99.0 Weakly correlated
260 L1MD 1 n.s 99.0 Weakly correlated
261 L1MD3 1 n.s 99.0 Weakly correlated
262 L1ME3C 1 n.s 99.0 Weakly correlated
263 L1ME3F 1 n.s 99.0 Weakly correlated
264 L1MEa 1 n.s 99.0 Weakly correlated
265 L1MEf 1 n.s 99.0 Weakly correlated
266 L1MEg2 1 n.s 99.0 Weakly correlated
267 L1MEi 1 n.s 99.0 Weakly correlated
268 L1P1 1 n.s 19.6 Weakly correlated
269 L1P2 1 n.s 28.9 Highly correlated
270 L1P3b 1 ** 43.0 Moderately correlated
271 L1P4 1 n.s 74.0 Weakly correlated
272 L1PA5 1 n.s 19.6 Weakly correlated
273 L1PB3 1 n.s 74.0 Weakly correlated
274 L2-1_AMi 1 n.s 319.0 Weakly correlated
275 LOR1-int 1 n.s 74.0 Weakly correlated
276 LOR1a 1 n.s 74.0 Weakly correlated
277 LOR1b 1 n.s 74.0 Weakly correlated
278 LTR1 1 n.s 43.0 Moderately correlated
279 LTR102_Mam 1 n.s 99.0 Weakly correlated
280 LTR10B 1 ** 28.9 Highly correlated
281 LTR10G 1 * 28.9 Highly correlated
282 LTR12E 1 * 19.6 Weakly correlated
283 LTR14B 1 n.s 28.9 Highly correlated
284 LTR16A 1 n.s 99.0 Weakly correlated
285 LTR16A2 1 n.s 99.0 Weakly correlated
286 LTR16D2 1 * 99.0 Weakly correlated
287 LTR19C 1 * 43.0 Moderately correlated
288 LTR1A1 1 n.s 43.0 Moderately correlated
289 LTR1F 1 * 43.0 Moderately correlated
290 LTR21A 1 ** 28.9 Highly correlated
291 LTR24B 1 n.s 74.0 Weakly correlated
292 LTR25-int 1 n.s 43.0 Moderately correlated
293 LTR27C 1 * 43.0 Moderately correlated
294 LTR29 1 n.s 43.0 Moderately correlated
295 LTR33A 1 n.s 99.0 Weakly correlated
296 LTR33A_ 1 n.s 99.0 Weakly correlated
297 LTR33B 1 n.s 99.0 Weakly correlated
298 LTR33C 1 n.s 99.0 Weakly correlated
299 LTR37A 1 n.s 99.0 Weakly correlated
300 LTR4 1 ** 28.9 Highly correlated
301 LTR45B 1 n.s 74.0 Weakly correlated
302 LTR48 1 n.s 74.0 Weakly correlated
303 LTR49 1 n.s 74.0 Weakly correlated
304 LTR54B 1 n.s 74.0 Weakly correlated
305 LTR59 1 ** 43.0 Moderately correlated
306 LTR7 1 n.s 19.6 Weakly correlated
307 LTR78B 1 n.s 99.0 Weakly correlated
308 LTR79 1 n.s 99.0 Weakly correlated
309 LTR81 1 * 99.0 Weakly correlated
310 LTR81C 1 n.s 99.0 Weakly correlated
311 LTR82B 1 n.s 99.0 Weakly correlated
312 LTR87 1 n.s 99.0 Weakly correlated
313 LTR88c 1 n.s 99.0 Weakly correlated
314 LTR8A 1 n.s 43.0 Moderately correlated
315 LTR8B 1 n.s 43.0 Moderately correlated
316 LTR9D 1 n.s 43.0 Moderately correlated
317 MER110 1 n.s 99.0 Weakly correlated
318 MER31A 1 n.s 87.0 Weakly correlated
319 MER34A 1 n.s 99.0 Weakly correlated
320 MER34B 1 n.s 87.0 Weakly correlated
321 MER39 1 n.s 74.0 Weakly correlated
322 MER41A 1 n.s 74.0 Weakly correlated
323 MER41C 1 n.s 74.0 Weakly correlated
324 MER4A 1 n.s 74.0 Weakly correlated
325 MER4B 1 n.s 74.0 Weakly correlated
326 MER4C 1 n.s 74.0 Weakly correlated
327 MER4CL34 1 n.s 43.0 Moderately correlated
328 MER4D 1 n.s 74.0 Weakly correlated
329 MER4D0 1 n.s 74.0 Weakly correlated
330 MER50-int 1 n.s 43.0 Moderately correlated
331 MER51E 1 * 43.0 Moderately correlated
332 MER52C 1 n.s 74.0 Weakly correlated
333 MER54B 1 n.s 87.0 Weakly correlated
334 MER57B1 1 n.s 43.0 Moderately correlated
335 MER61B 1 n.s 43.0 Moderately correlated
336 MER61C 1 * 43.0 Moderately correlated
337 MER61E 1 * 43.0 Moderately correlated
338 MER61F 1 * 43.0 Moderately correlated
339 MER66-int 1 n.s 43.0 Moderately correlated
340 MER67A 1 * 99.0 Weakly correlated
341 MER70C 1 * 99.0 Weakly correlated
342 MER72B 1 * 43.0 Moderately correlated
343 MER76 1 n.s 99.0 Weakly correlated
344 MER77 1 n.s 99.0 Weakly correlated
345 MER77B 1 n.s 99.0 Weakly correlated
346 MER83B 1 ** 43.0 Moderately correlated
347 MER83B-int 1 n.s 99.0 Weakly correlated
348 MER87B 1 * 74.0 Weakly correlated
349 MLT1E1 1 n.s 99.0 Weakly correlated
350 MLT1E3 1 n.s 99.0 Weakly correlated
351 MLT1F1-int 1 * 99.0 Weakly correlated
352 MLT1G1 1 n.s 99.0 Weakly correlated
353 MLT1G1-int 1 n.s 99.0 Weakly correlated
354 MLT1H2 1 n.s 99.0 Weakly correlated
355 MLT1H2-int 1 n.s 99.0 Weakly correlated
356 MLT1I-int 1 n.s 99.0 Weakly correlated
357 MLT1J1 1 n.s 99.0 Weakly correlated
358 MLT1J2-int 1 n.s 99.0 Weakly correlated
359 MLT1M 1 n.s 99.0 Weakly correlated
360 MLT2A1 1 n.s 74.0 Weakly correlated
361 MLT2B3 1 n.s 99.0 Weakly correlated
362 MST-int 1 * 74.0 Weakly correlated
363 MSTB1-int 1 n.s 74.0 Weakly correlated
364 MamGypLTR3a 1 n.s 99.0 Weakly correlated
365 MamRTE1 1 n.s 99.0 Weakly correlated
366 PABL_B-int 1 n.s 74.0 Weakly correlated
367 Plat_L3 1 n.s 99.0 Weakly correlated
368 THE1-int 1 * 43.0 Moderately correlated
369 X6A_LINE 1 * 99.0 Weakly correlated
370 X8_LINE 1 ** 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 MER11A 288 **** 28.9 Highly correlated
2 LTR17 148 **** 28.9 Highly correlated
3 THE1B-int 60 **** 43.0 Moderately correlated
4 L2a 36 n.s 99.0 Weakly correlated
5 SVA_D 23 **** 15.2 Weakly correlated
6 L2b 23 n.s 99.0 Weakly correlated
7 THE1C-int 22 **** 43.0 Moderately correlated
8 MSTA-int 19 *** 43.0 Moderately correlated
9 L2 17 n.s 99.0 Weakly correlated
10 L2c 16 n.s 99.0 Weakly correlated
11 MSTA 16 n.s 43.0 Moderately correlated
12 THE1B 15 n.s 43.0 Moderately correlated
13 AluSz 14 n.s 74.0 Weakly correlated
14 MSTB 13 * 43.0 Moderately correlated
15 THE1A-int 13 *** 43.0 Moderately correlated
16 THE1D-int 12 ** 28.9 Highly correlated
17 AluSx1 11 n.s 74.0 Weakly correlated
18 HERVK9-int 11 **** 28.9 Highly correlated
19 AluJb 11 n.s 74.0 Weakly correlated
20 AluY 10 n.s 74.0 Weakly correlated
21 L1PA7 10 n.s 74.0 Weakly correlated
22 L1PA10 9 n.s 74.0 Weakly correlated
23 MIRb 9 n.s 99.0 Weakly correlated
24 AluSq2 8 n.s 74.0 Weakly correlated
25 L1MB3 8 n.s 99.0 Weakly correlated
26 MER50 8 ** 43.0 Moderately correlated
27 LTR9B 8 **** 43.0 Moderately correlated
28 LTR12C 7 n.s 19.6 Weakly correlated
29 THE1C 7 n.s 43.0 Moderately correlated
30 THE1D 7 n.s 43.0 Moderately correlated
31 AluSz6 7 n.s 74.0 Weakly correlated
32 MIR 7 n.s 99.0 Weakly correlated
33 AluJr 7 n.s 74.0 Weakly correlated
34 MIR3 7 n.s 99.0 Weakly correlated
35 SVA_B 7 *** 15.2 Weakly correlated
36 AluJo 6 n.s 74.0 Weakly correlated
37 LTR28C 6 **** 43.0 Moderately correlated
38 MER4A1 6 ** 74.0 Weakly correlated
39 MER51A 6 *** 43.0 Moderately correlated
40 MER72 6 **** 43.0 Moderately correlated
41 LTR14C 6 **** 28.9 Highly correlated
42 LTR6A 6 **** 28.9 Highly correlated
43 SVA_A 6 *** 19.6 Weakly correlated
44 SVA_F 6 ** 0.0 Weakly correlated
45 AluSp 5 n.s 74.0 Weakly correlated
46 MER11B 5 ** 19.6 Weakly correlated
47 MER21C 5 n.s 99.0 Weakly correlated
48 MLT1J 5 n.s 99.0 Weakly correlated
49 MSTB1 5 n.s 74.0 Weakly correlated
50 AluSx 5 n.s 74.0 Weakly correlated
51 HAL1 5 n.s 99.0 Weakly correlated
52 HERVE-int 5 ** 19.6 Weakly correlated
53 L1MB7 5 n.s 99.0 Weakly correlated
54 LTR33 5 n.s 99.0 Weakly correlated
55 L1PA8 5 n.s 74.0 Weakly correlated
56 L1PB1 5 n.s 74.0 Weakly correlated
57 MLT1B 5 n.s 99.0 Weakly correlated
58 L1MA9 5 n.s 99.0 Weakly correlated
59 LTR1B 4 *** 43.0 Moderately correlated
60 MER21A 4 n.s 74.0 Weakly correlated
61 L1PA16 4 n.s 74.0 Weakly correlated
62 L1MC1 4 n.s 99.0 Weakly correlated
63 L1MEd 4 n.s 99.0 Weakly correlated
64 L1M1 4 n.s 74.0 Weakly correlated
65 L1MDb 4 * 99.0 Weakly correlated
66 MER52A 4 n.s 74.0 Weakly correlated
67 AluSg 4 n.s 74.0 Weakly correlated
68 L1P3 4 n.s 74.0 Weakly correlated
69 LTR16C 4 n.s 99.0 Weakly correlated
70 L1PA13 3 n.s 74.0 Weakly correlated
71 L1MB1 3 n.s 99.0 Weakly correlated
72 L1PB4 3 n.s 99.0 Weakly correlated
73 MER52D 3 n.s 74.0 Weakly correlated
74 MSTB-int 3 n.s 43.0 Moderately correlated
75 HERVH48-int 3 ** 28.9 Highly correlated
76 L1MA2 3 n.s 74.0 Weakly correlated
77 LTR50 3 n.s 99.0 Weakly correlated
78 MLT1A1 3 n.s 87.0 Weakly correlated
79 L1MA4A 3 n.s 87.0 Weakly correlated
80 L1ME4a 3 n.s 99.0 Weakly correlated
81 L1MDa 3 n.s 99.0 Weakly correlated
82 LTR1D1 3 ** 43.0 Moderately correlated
83 MER11C 3 n.s 19.6 Weakly correlated
84 HAL1ME 3 n.s 99.0 Weakly correlated
85 L1PA8A 3 n.s 74.0 Weakly correlated
86 L3 3 n.s 99.0 Weakly correlated
87 MER61A 3 ** 43.0 Moderately correlated
88 MLT1D 3 n.s 99.0 Weakly correlated
89 MLT1F 3 n.s 99.0 Weakly correlated
90 L1ME4b 3 n.s 99.0 Weakly correlated
91 L1PA3 3 n.s 19.6 Weakly correlated
92 MLT1G3 3 n.s 99.0 Weakly correlated
93 AluSx3 3 n.s 74.0 Weakly correlated
94 L1MCa 3 n.s 99.0 Weakly correlated
95 L1PBa 3 n.s 74.0 Weakly correlated
96 MER21B 3 n.s 99.0 Weakly correlated
97 L1MB4 2 n.s 99.0 Weakly correlated
98 L1MB8 2 n.s 99.0 Weakly correlated
99 L1ME3 2 n.s 99.0 Weakly correlated
100 LTR16E1 2 n.s 99.0 Weakly correlated
101 MER41-int 2 n.s 74.0 Weakly correlated
102 MSTC 2 n.s 74.0 Weakly correlated
103 MSTD 2 n.s 74.0 Weakly correlated
104 HERVFH21-int 2 ** 28.9 Highly correlated
105 L1ME3G 2 n.s 99.0 Weakly correlated
106 AluJr4 2 n.s 74.0 Weakly correlated
107 HERVH-int 2 n.s 28.9 Highly correlated
108 HUERS-P3b-int 2 n.s 43.0 Moderately correlated
109 LTR1F2 2 ** 43.0 Moderately correlated
110 LTR2 2 n.s 28.9 Highly correlated
111 LTR46-int 2 ** 74.0 Weakly correlated
112 MLT1K 2 n.s 99.0 Weakly correlated
113 L1MCc 2 n.s 99.0 Weakly correlated
114 L1ME1 2 n.s 99.0 Weakly correlated
115 L1PA11 2 n.s 74.0 Weakly correlated
116 MER83 2 ** 43.0 Moderately correlated
117 MSTB2 2 n.s 74.0 Weakly correlated
118 SVA_C 2 n.s 15.2 Weakly correlated
119 HUERS-P2-int 2 * 43.0 Moderately correlated
120 L1MC4 2 n.s 99.0 Weakly correlated
121 L1ME2 2 n.s 99.0 Weakly correlated
122 L1PA12 2 n.s 74.0 Weakly correlated
123 LTR1B0 2 *** 43.0 Moderately correlated
124 LTR1F1 2 ** 43.0 Moderately correlated
125 LTR41 2 n.s 99.0 Weakly correlated
126 LTR48B 2 n.s 74.0 Weakly correlated
127 MER92B 2 * 99.0 Weakly correlated
128 L1M5 2 n.s 99.0 Weakly correlated
129 L1MB2 2 n.s 99.0 Weakly correlated
130 L1MD2 2 n.s 99.0 Weakly correlated
131 L1PA17 2 n.s 74.0 Weakly correlated
132 LTR16 2 n.s 99.0 Weakly correlated
133 LTR16A1 2 n.s 99.0 Weakly correlated
134 LTR1E 2 * 43.0 Moderately correlated
135 MER49 2 n.s 43.0 Moderately correlated
136 MER74A 2 n.s 99.0 Weakly correlated
137 MLT1H 2 n.s 99.0 Weakly correlated
138 MLT1O 2 n.s 99.0 Weakly correlated
139 AluSc 2 n.s 74.0 Weakly correlated
140 AluSc8 2 n.s 74.0 Weakly correlated
141 L1MC 2 n.s 99.0 Weakly correlated
142 L2-3_Crp 2 n.s 431.0 Weakly correlated
143 LTR10E 2 ** 28.9 Highly correlated
144 MER90a 2 n.s 99.0 Weakly correlated
145 MIRc 2 n.s 99.0 Weakly correlated
146 FLAM_C 2 n.s 74.0 Weakly correlated
147 HUERS-P3-int 2 n.s 43.0 Moderately correlated
148 L1MA3 2 n.s 74.0 Weakly correlated
149 L1MD1 2 n.s 99.0 Weakly correlated
150 L1PA4 2 n.s 19.6 Weakly correlated
151 LTR55 2 ** 99.0 Weakly correlated
152 MER4-int 2 n.s 74.0 Weakly correlated
153 MER61-int 2 n.s 43.0 Moderately correlated
154 MER66B 2 n.s 43.0 Moderately correlated
155 MLT1F2 2 n.s 99.0 Weakly correlated
156 L1MC3 1 n.s 99.0 Weakly correlated
157 L1P2 1 n.s 28.9 Highly correlated
158 L1PA2 1 n.s 15.2 Weakly correlated
159 LTR59 1 ** 43.0 Moderately correlated
160 MER34B 1 n.s 87.0 Weakly correlated
161 MER41B 1 n.s 74.0 Weakly correlated
162 MER4B 1 n.s 74.0 Weakly correlated
163 MER87 1 * 43.0 Moderately correlated
164 MLT1A 1 n.s 99.0 Weakly correlated
165 MLT1H2-int 1 n.s 99.0 Weakly correlated
166 MSTB1-int 1 n.s 74.0 Weakly correlated
167 AluSg4 1 n.s 74.0 Weakly correlated
168 L1M6 1 n.s 99.0 Weakly correlated
169 LTR102_Mam 1 n.s 99.0 Weakly correlated
170 LTR10G 1 * 28.9 Highly correlated
171 LTR12E 1 * 19.6 Weakly correlated
172 LTR29 1 n.s 43.0 Moderately correlated
173 LTR4 1 ** 28.9 Highly correlated
174 LTR81 1 * 99.0 Weakly correlated
175 LTR9D 1 n.s 43.0 Moderately correlated
176 MER31A 1 n.s 87.0 Weakly correlated
177 MER34A 1 n.s 99.0 Weakly correlated
178 MER52-int 1 n.s 99.0 Weakly correlated
179 THE1A 1 n.s 43.0 Moderately correlated
180 X8_LINE 1 ** 319.0 Weakly correlated
181 HERVFH19-int 1 * 43.0 Moderately correlated
182 LTR1 1 n.s 43.0 Moderately correlated
183 LTR10A 1 n.s 28.9 Highly correlated
184 LTR16A 1 n.s 99.0 Weakly correlated
185 LTR33A 1 n.s 99.0 Weakly correlated
186 MER4D 1 n.s 74.0 Weakly correlated
187 MLT1F1-int 1 * 99.0 Weakly correlated
188 MamSINE1 1 n.s 99.0 Weakly correlated
189 FLAM_A 1 n.s 74.0 Weakly correlated
190 HERVI-int 1 n.s 28.9 Highly correlated
191 L1M4b 1 n.s 99.0 Weakly correlated
192 L1ME3D 1 n.s 99.0 Weakly correlated
193 L1ME3E 1 n.s 99.0 Weakly correlated
194 L1MEa 1 n.s 99.0 Weakly correlated
195 L1P3b 1 ** 43.0 Moderately correlated
196 LOR1b 1 n.s 74.0 Weakly correlated
197 LTR10B 1 ** 28.9 Highly correlated
198 LTR16D2 1 * 99.0 Weakly correlated
199 LTR25-int 1 n.s 43.0 Moderately correlated
200 LTR67B 1 n.s 99.0 Weakly correlated
201 LTR8A 1 n.s 43.0 Moderately correlated
202 MER41A 1 n.s 74.0 Weakly correlated
203 MER51E 1 * 43.0 Moderately correlated
204 MER61F 1 * 43.0 Moderately correlated
205 MER66-int 1 n.s 43.0 Moderately correlated
206 MLT2B4 1 n.s 99.0 Weakly correlated
207 MamGypLTR1a 1 n.s 99.0 Weakly correlated
208 THE1-int 1 * 43.0 Moderately correlated
209 ERVL-B4-int 1 n.s 99.0 Weakly correlated
210 L1MA5A 1 n.s 87.0 Weakly correlated
211 L1MC2 1 n.s 99.0 Weakly correlated
212 L1MC5 1 n.s 99.0 Weakly correlated
213 L1MC5a 1 n.s 99.0 Weakly correlated
214 LTR10F 1 n.s 28.9 Highly correlated
215 LTR1F 1 * 43.0 Moderately correlated
216 LTR21A 1 ** 28.9 Highly correlated
217 MER54B 1 n.s 87.0 Weakly correlated
218 MER61C 1 * 43.0 Moderately correlated
219 MLT1E2 1 n.s 99.0 Weakly correlated
220 MLT1G1 1 n.s 99.0 Weakly correlated
221 MLT1I 1 n.s 99.0 Weakly correlated
222 MLT1I-int 1 n.s 99.0 Weakly correlated
223 MLT1J1 1 n.s 99.0 Weakly correlated
224 MLT1L 1 n.s 99.0 Weakly correlated
225 AluYk4 1 n.s 15.2 Weakly correlated
226 L1M8 1 n.s 99.0 Weakly correlated
227 L1MA4 1 n.s 87.0 Weakly correlated
228 L1MC4a 1 n.s 99.0 Weakly correlated
229 L1PA6 1 n.s 28.9 Highly correlated
230 L2-1_AMi 1 n.s 319.0 Weakly correlated
231 LTR13 1 n.s 19.6 Weakly correlated
232 LTR41C 1 n.s 99.0 Weakly correlated
233 LTR49 1 n.s 74.0 Weakly correlated
234 MER52C 1 n.s 74.0 Weakly correlated
235 MER68 1 n.s 99.0 Weakly correlated
236 MER72B 1 * 43.0 Moderately correlated
237 MIR1_Amn 1 n.s 319.0 Weakly correlated
238 MST-int 1 * 74.0 Weakly correlated
239 AluYk2 1 n.s 19.6 Weakly correlated
240 HERVIP10FH-int 1 n.s 28.9 Highly correlated
241 L1M4c 1 n.s 99.0 Weakly correlated
242 L1MEc 1 n.s 99.0 Weakly correlated
243 L1PREC2 1 n.s 43.0 Moderately correlated
244 LTR8 1 n.s 43.0 Moderately correlated
245 MER31B 1 n.s 99.0 Weakly correlated
246 MER67C 1 n.s 99.0 Weakly correlated
247 MER77B 1 n.s 99.0 Weakly correlated
248 MLT1C 1 n.s 94.0 Weakly correlated
249 MLT1H1 1 n.s 99.0 Weakly correlated
250 AluYa5 1 n.s 15.2 Weakly correlated
251 ERVL-E-int 1 n.s 99.0 Weakly correlated
252 L1M2 1 n.s 99.0 Weakly correlated
253 L1MB5 1 n.s 99.0 Weakly correlated
254 L1ME3Cz 1 n.s 99.0 Weakly correlated
255 L1MEf 1 n.s 99.0 Weakly correlated
256 L1P4 1 n.s 74.0 Weakly correlated
257 LTR16A2 1 n.s 99.0 Weakly correlated
258 LTR1A1 1 n.s 43.0 Moderately correlated
259 MER4A 1 n.s 74.0 Weakly correlated
260 MER4D0 1 n.s 74.0 Weakly correlated
261 MER67A 1 * 99.0 Weakly correlated
262 MLT1F1 1 n.s 99.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 HERVK9-INT 28.9 Highly correlated
2 L2 99.0 Weakly correlated
3 LTR14C 28.9 Highly correlated
4 LTR17 28.9 Highly correlated
5 LTR28C 43.0 Moderately correlated
6 LTR6A 28.9 Highly correlated
7 LTR9B 43.0 Moderately correlated
8 MER11A 28.9 Highly correlated
9 MER4A1 74.0 Weakly correlated
10 MER50 43.0 Moderately correlated
11 MER51A 43.0 Moderately correlated
12 MER72 43.0 Moderately correlated
13 MSTA 43.0 Moderately correlated
14 SVA_A 19.6 Weakly correlated
15 SVA_B 15.2 Weakly correlated
16 THE1B 43.0 Moderately correlated
17 THE1C 43.0 Moderately correlated
18 THE1D-INT 28.9 Highly correlated