ZRdb KZFP & Repeats
...

Human_ZNF485

  • Protein
    Zinc finger protein 485
  • Length
    441
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    99.0 Mya
  • Time of Changing in binding specificity
    94.0 Mya
  • Uniprot_ID
    Q8NCK3
  • NCBI_ID
    220992
Sequence:
MAPRAQIQGPLTFGDVAVAFTRIEWRHLDAAQRALYRDVMLENYGNLVSVGLLSSKPKLITQLEQGAEPWTEVREAPSGTHAVEDYWFETKMSALKQSTSEASVLGERTKSVMMEKGLDWEGRSSTEKNYKCKECGKVFKYNSSFISHQRNHTSEKPHKCKECGIAFMNSSSLLNHHKVHAGKQPYRCIECGKFLKKHSTFINHQRIHSREKPHKCIECGKTFRKNSILLSHQRIHTGQKPYKCNDCGKAFAQNAALTRHERIHSGEKPFKCNKCGRAFRDNSTVLEHQKIHTGEKPYQCNECGKAFRKSSTLISHQRMHTGEKPYHCSKCGKSFRYSSSFAGHQKTHSGNKPYQCRDCGKAFTKSSTLTGHQRIHTGEKPYHCKKCGKAFRHSSGLVEHQRLHTGEKPYKCNECGKAFPRSSALKQHKKIHNKERAMKCS
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 KRAB 11..82
2 C2h2 130..152
3 C2h2 158..180
4 C2h2 186..208
5 C2h2 214..236
6 C2h2 242..264
7 C2h2 270..292
8 C2h2 298..320
9 C2h2 326..348
10 C2h2 354..376
11 C2h2 382..404
12 C2h2 410..432
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription activator activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
...
Reverse:
...
Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 HERVL-int 333 **** 74.0 Weakly correlated
2 L2a 253 **** 99.0 Moderately correlated
3 L2c 214 **** 99.0 Moderately correlated
4 MIRb 167 **** 99.0 Moderately correlated
5 L2 132 **** 99.0 Moderately correlated
6 L2b 118 **** 99.0 Moderately correlated
7 L1MC1 108 **** 99.0 Moderately correlated
8 MIR 103 ** 99.0 Moderately correlated
9 L1PA13 96 **** 74.0 Weakly correlated
10 AluJb 93 n.s 74.0 Weakly correlated
11 AluSx 89 n.s 74.0 Weakly correlated
12 AluSx1 85 n.s 74.0 Weakly correlated
13 AluSz 82 n.s 74.0 Weakly correlated
14 ERVL-B4-int 80 **** 99.0 Moderately correlated
15 AluY 71 n.s 74.0 Weakly correlated
16 MIRc 71 **** 99.0 Moderately correlated
17 AluJr 65 n.s 74.0 Weakly correlated
18 ERVL-E-int 64 **** 99.0 Moderately correlated
19 MIR3 57 **** 99.0 Moderately correlated
20 L1PA15 55 **** 74.0 Weakly correlated
21 AluJo 51 n.s 74.0 Weakly correlated
22 L3 51 **** 99.0 Moderately correlated
23 MLT1C 48 **** 94.0 Highly correlated
24 AluSq2 46 n.s 74.0 Weakly correlated
25 L1MC2 45 **** 99.0 Moderately correlated
26 HAL1 42 *** 99.0 Moderately correlated
27 AluSp 39 n.s 74.0 Weakly correlated
28 L1M5 37 n.s 99.0 Moderately correlated
29 AluSg 36 n.s 74.0 Weakly correlated
30 L1MC3 34 ** 99.0 Moderately correlated
31 L1MC4 34 * 99.0 Moderately correlated
32 MSTA 34 *** 43.0 Weakly correlated
33 L1PREC2 33 *** 43.0 Weakly correlated
34 THE1B 31 * 43.0 Weakly correlated
35 AluSc 30 n.s 74.0 Weakly correlated
36 AluSz6 29 n.s 74.0 Weakly correlated
37 L1ME1 28 n.s 99.0 Moderately correlated
38 MLT1B 28 *** 99.0 Moderately correlated
39 MLT1D 28 * 99.0 Moderately correlated
40 L1MB7 26 n.s 99.0 Moderately correlated
41 L1PA16 25 n.s 74.0 Weakly correlated
42 AluSx3 24 n.s 74.0 Weakly correlated
43 L1MC4a 24 *** 99.0 Moderately correlated
44 MLT1J 24 **** 99.0 Moderately correlated
45 ERV3-16A3_I-int 23 *** 99.0 Moderately correlated
46 L1ME4a 23 n.s 99.0 Moderately correlated
47 L1PB1 23 n.s 74.0 Weakly correlated
48 MLT1L 23 **** 99.0 Moderately correlated
49 L1M4 22 n.s 99.0 Moderately correlated
50 L1MEd 22 n.s 99.0 Moderately correlated
51 L1ME4b 20 n.s 99.0 Moderately correlated
52 MLT1K 20 ** 99.0 Moderately correlated
53 AluSc8 19 n.s 74.0 Weakly correlated
54 FLAM_C 19 *** 74.0 Weakly correlated
55 HERVH-int 19 n.s 28.9 Weakly correlated
56 L1MB3 19 n.s 99.0 Moderately correlated
57 L1MC5a 19 n.s 99.0 Moderately correlated
58 L1PA14 18 ** 74.0 Weakly correlated
59 L1PA7 18 n.s 74.0 Weakly correlated
60 THE1A 18 **** 43.0 Weakly correlated
61 L1M1 17 n.s 74.0 Weakly correlated
62 L1MA9 17 n.s 99.0 Moderately correlated
63 L1MB8 17 n.s 99.0 Moderately correlated
64 L1MEc 17 n.s 99.0 Moderately correlated
65 L1PA8 16 n.s 74.0 Weakly correlated
66 MLT1I 16 *** 99.0 Moderately correlated
67 ERVL-int 15 **** 99.0 Moderately correlated
68 L1PA17 15 * 74.0 Weakly correlated
69 LTR16C 15 **** 99.0 Moderately correlated
70 LTR9B 15 **** 43.0 Weakly correlated
71 L1ME3Cz 14 n.s 99.0 Moderately correlated
72 L1PA12 14 **** 74.0 Weakly correlated
73 L1PA4 14 n.s 19.6 Weakly correlated
74 AluJr4 13 n.s 74.0 Weakly correlated
75 HERVK14-int 13 **** 28.9 Weakly correlated
76 L1ME3B 13 n.s 99.0 Moderately correlated
77 L1ME3G 13 n.s 99.0 Moderately correlated
78 L1MEg 13 n.s 99.0 Moderately correlated
79 L1PB4 13 n.s 99.0 Moderately correlated
80 MER39 13 **** 74.0 Weakly correlated
81 MSTB1 13 *** 74.0 Weakly correlated
82 THE1D 13 n.s 43.0 Weakly correlated
83 L1MA4A 12 n.s 87.0 Weakly correlated
84 L1MC5 12 n.s 99.0 Moderately correlated
85 L1MD2 12 n.s 99.0 Moderately correlated
86 L1PA5 12 n.s 19.6 Weakly correlated
87 MLT1A0 12 n.s 99.0 Moderately correlated
88 AluSq 11 n.s 74.0 Weakly correlated
89 L1ME2 11 n.s 99.0 Moderately correlated
90 MLT1A 11 n.s 99.0 Moderately correlated
91 MLT1J2 11 ** 99.0 Moderately correlated
92 AluSx4 10 n.s 74.0 Weakly correlated
93 HERVP71A-int 10 **** 43.0 Weakly correlated
94 L1MA2 10 n.s 74.0 Weakly correlated
95 L1MA4 10 n.s 87.0 Weakly correlated
96 L1MD3 10 * 99.0 Moderately correlated
97 L1ME3A 10 n.s 99.0 Moderately correlated
98 L1MEf 10 n.s 99.0 Moderately correlated
99 L1PBa 10 n.s 74.0 Weakly correlated
100 MLT1N2 10 *** 99.0 Moderately correlated
101 MLT1O 10 **** 99.0 Moderately correlated
102 FLAM_A 9 * 74.0 Weakly correlated
103 L1M2 9 n.s 99.0 Moderately correlated
104 L1M4b 9 n.s 99.0 Moderately correlated
105 L1MB5 9 n.s 99.0 Moderately correlated
106 L1ME3 9 n.s 99.0 Moderately correlated
107 L1PA10 9 n.s 74.0 Weakly correlated
108 L1PA11 9 n.s 74.0 Weakly correlated
109 L3b 9 ** 99.0 Moderately correlated
110 MIR1_Amn 9 ** 319.0 Weakly correlated
111 MLT1E3 9 **** 99.0 Moderately correlated
112 MSTB 9 n.s 43.0 Weakly correlated
113 AluSg4 8 n.s 74.0 Weakly correlated
114 L1M6 8 * 99.0 Moderately correlated
115 L1MA7 8 n.s 87.0 Weakly correlated
116 L1ME3E 8 * 99.0 Moderately correlated
117 MER11C 8 ** 19.6 Weakly correlated
118 MLT1G3 8 ** 99.0 Moderately correlated
119 MLT1H 8 n.s 99.0 Moderately correlated
120 MamRep605 8 *** 99.0 Moderately correlated
121 THE1C 8 n.s 43.0 Weakly correlated
122 L1MA8 7 n.s 87.0 Weakly correlated
123 L1MB1 7 n.s 99.0 Moderately correlated
124 L1MC 7 n.s 99.0 Moderately correlated
125 L1MCa 7 n.s 99.0 Moderately correlated
126 L1MD1 7 n.s 99.0 Moderately correlated
127 L1ME3D 7 n.s 99.0 Moderately correlated
128 L1P3 7 n.s 74.0 Weakly correlated
129 L1PA3 7 n.s 19.6 Weakly correlated
130 L1PB3 7 n.s 74.0 Weakly correlated
131 MER41C 7 **** 74.0 Weakly correlated
132 MSTA-int 7 n.s 43.0 Weakly correlated
133 MamRTE1 7 * 99.0 Moderately correlated
134 Plat_L3 7 *** 99.0 Moderately correlated
135 AluSc5 6 n.s 74.0 Weakly correlated
136 HERV16-int 6 ** 99.0 Moderately correlated
137 HERVIP10FH-int 6 *** 28.9 Weakly correlated
138 L1M3 6 n.s 99.0 Moderately correlated
139 L1M4a2 6 * 99.0 Moderately correlated
140 L1M8 6 ** 99.0 Moderately correlated
141 L1MB2 6 n.s 99.0 Moderately correlated
142 L1ME3C 6 * 99.0 Moderately correlated
143 L1ME5 6 * 99.0 Moderately correlated
144 L1PA6 6 n.s 28.9 Weakly correlated
145 L1PA8A 6 n.s 74.0 Weakly correlated
146 LTR16 6 * 99.0 Moderately correlated
147 LTR16A 6 n.s 99.0 Moderately correlated
148 LTR33 6 n.s 99.0 Moderately correlated
149 LTR33A 6 ** 99.0 Moderately correlated
150 MER21C 6 n.s 99.0 Moderately correlated
151 MER4-int 6 n.s 74.0 Weakly correlated
152 MER41-int 6 n.s 74.0 Weakly correlated
153 MLT1F2 6 n.s 99.0 Moderately correlated
154 MLT1H2 6 * 99.0 Moderately correlated
155 MLT2B3 6 n.s 99.0 Moderately correlated
156 MLT2F 6 ** 99.0 Moderately correlated
157 THE1A-int 6 n.s 43.0 Weakly correlated
158 AluYc 5 n.s 74.0 Weakly correlated
159 FRAM 5 n.s 74.0 Weakly correlated
160 HAL1ME 5 n.s 99.0 Moderately correlated
161 L1M4c 5 n.s 99.0 Moderately correlated
162 L1MA10 5 n.s 99.0 Moderately correlated
163 L1MA3 5 n.s 74.0 Weakly correlated
164 L1MB4 5 n.s 99.0 Moderately correlated
165 L1MD 5 n.s 99.0 Moderately correlated
166 L1ME2z 5 n.s 99.0 Moderately correlated
167 LTR16B2 5 ** 99.0 Moderately correlated
168 LTR2 5 *** 28.9 Weakly correlated
169 LTR33C 5 **** 99.0 Moderately correlated
170 LTR50 5 * 99.0 Moderately correlated
171 LTR78 5 n.s 99.0 Moderately correlated
172 LTR81B 5 *** 99.0 Moderately correlated
173 MER21B 5 n.s 99.0 Moderately correlated
174 MER4C 5 **** 74.0 Weakly correlated
175 MER50-int 5 ** 43.0 Weakly correlated
176 MLT1G 5 * 99.0 Moderately correlated
177 MLT2B4 5 n.s 99.0 Moderately correlated
178 THE1B-int 5 n.s 43.0 Weakly correlated
179 AluYm1 4 n.s 19.6 Weakly correlated
180 HAL1M8 4 n.s 99.0 Moderately correlated
181 HERVK9-int 4 n.s 28.9 Weakly correlated
182 L1M4a1 4 n.s 99.0 Moderately correlated
183 L1MCc 4 n.s 99.0 Moderately correlated
184 L1MDa 4 n.s 99.0 Moderately correlated
185 L1MEh 4 n.s 99.0 Moderately correlated
186 L1PA2 4 n.s 15.2 Weakly correlated
187 L1PB2 4 n.s 74.0 Weakly correlated
188 L4_A_Mam 4 n.s 99.0 Moderately correlated
189 L4_C_Mam 4 n.s 99.0 Moderately correlated
190 LOR1-int 4 n.s 74.0 Weakly correlated
191 LTR103b_Mam 4 **** 99.0 Moderately correlated
192 LTR16B1 4 ** 99.0 Moderately correlated
193 LTR16E1 4 * 99.0 Moderately correlated
194 LTR41C 4 *** 99.0 Moderately correlated
195 LTR48B 4 ** 74.0 Weakly correlated
196 LTR49-int 4 n.s 74.0 Weakly correlated
197 LTR8 4 n.s 43.0 Weakly correlated
198 LTR88a 4 **** 99.0 Moderately correlated
199 LTR9 4 ** 43.0 Weakly correlated
200 MER34 4 ** 87.0 Weakly correlated
201 MER34A 4 ** 99.0 Moderately correlated
202 MER34B 4 *** 87.0 Weakly correlated
203 MER41A 4 n.s 74.0 Weakly correlated
204 MER4D 4 * 74.0 Weakly correlated
205 MER65-int 4 * 87.0 Weakly correlated
206 MLT1E2 4 n.s 99.0 Moderately correlated
207 MamGypLTR3a 4 ** 99.0 Moderately correlated
208 MamRep1527 4 ** 99.0 Moderately correlated
209 ERV3-16A3_LTR 3 ** 99.0 Moderately correlated
210 HERVE_a-int 3 * 28.9 Weakly correlated
211 HUERS-P1-int 3 * 43.0 Weakly correlated
212 Harlequin-int 3 n.s 74.0 Weakly correlated
213 L1M6B 3 *** 99.0 Moderately correlated
214 L1MA1 3 n.s 74.0 Weakly correlated
215 L1MA6 3 n.s 87.0 Weakly correlated
216 L1MCb 3 n.s 99.0 Moderately correlated
217 L1ME4c 3 n.s 99.0 Moderately correlated
218 L1MEb 3 n.s 99.0 Moderately correlated
219 L1MEi 3 n.s 99.0 Moderately correlated
220 L1P1 3 n.s 19.6 Weakly correlated
221 L1P4 3 n.s 74.0 Weakly correlated
222 LTR104_Mam 3 * 99.0 Moderately correlated
223 LTR10A 3 *** 28.9 Weakly correlated
224 LTR16A1 3 n.s 99.0 Moderately correlated
225 LTR19B 3 *** 43.0 Weakly correlated
226 LTR2C 3 *** 19.6 Weakly correlated
227 LTR33A_ 3 * 99.0 Moderately correlated
228 LTR41B 3 ** 99.0 Moderately correlated
229 LTR55 3 ** 99.0 Moderately correlated
230 LTR78B 3 n.s 99.0 Moderately correlated
231 LTR79 3 n.s 99.0 Moderately correlated
232 LTR8A 3 n.s 43.0 Weakly correlated
233 MER11A 3 n.s 28.9 Weakly correlated
234 MER11B 3 * 19.6 Weakly correlated
235 MER21A 3 n.s 74.0 Weakly correlated
236 MER31B 3 * 99.0 Moderately correlated
237 MER41B 3 n.s 74.0 Weakly correlated
238 MER4B-int 3 n.s 99.0 Moderately correlated
239 MER52D 3 n.s 74.0 Weakly correlated
240 MER57A-int 3 n.s 43.0 Weakly correlated
241 MER68 3 n.s 99.0 Moderately correlated
242 MER74A 3 n.s 99.0 Moderately correlated
243 MER77 3 n.s 99.0 Moderately correlated
244 MLT1F1 3 n.s 99.0 Moderately correlated
245 MLT1H-int 3 * 99.0 Moderately correlated
246 MLT1H1 3 n.s 99.0 Moderately correlated
247 MLT2A1 3 n.s 74.0 Weakly correlated
248 MLT2B1 3 n.s 99.0 Moderately correlated
249 MLT2C1 3 n.s 99.0 Moderately correlated
250 AluSg7 2 n.s 74.0 Weakly correlated
251 AluYa5 2 n.s 15.2 Weakly correlated
252 AluYj4 2 n.s 0.0 Weakly correlated
253 AmnSINE1 2 * 319.0 Weakly correlated
254 CR1-12_AMi 2 **** 319.0 Weakly correlated
255 CR1-16_AMi 2 ** 319.0 Weakly correlated
256 CR1_Mam 2 n.s 99.0 Moderately correlated
257 FAM 2 n.s 87.0 Weakly correlated
258 HAL1b 2 n.s 99.0 Moderately correlated
259 HERVE-int 2 n.s 19.6 Weakly correlated
260 HERVIP10B3-int 2 n.s 28.9 Weakly correlated
261 HERVK11-int 2 n.s 28.9 Weakly correlated
262 HERVK22-int 2 n.s 43.0 Weakly correlated
263 L1M2a 2 n.s 87.0 Weakly correlated
264 L1M3a 2 n.s 99.0 Moderately correlated
265 L1M7 2 n.s 99.0 Moderately correlated
266 L1ME3F 2 n.s 99.0 Moderately correlated
267 L1MEg2 2 * 99.0 Moderately correlated
268 L1P2 2 n.s 28.9 Weakly correlated
269 L1PB 2 n.s 74.0 Weakly correlated
270 L2-1_AMi 2 * 319.0 Weakly correlated
271 L2-3_Crp 2 n.s 431.0 Weakly correlated
272 LTR10F 2 * 28.9 Weakly correlated
273 LTR12C 2 n.s 19.6 Weakly correlated
274 LTR13 2 n.s 19.6 Weakly correlated
275 LTR16D 2 * 99.0 Moderately correlated
276 LTR16E2 2 n.s 99.0 Moderately correlated
277 LTR1A2 2 n.s 43.0 Weakly correlated
278 LTR26 2 * 74.0 Weakly correlated
279 LTR33B 2 n.s 99.0 Moderately correlated
280 LTR37-int 2 n.s 99.0 Moderately correlated
281 LTR38-int 2 *** 74.0 Weakly correlated
282 LTR41 2 n.s 99.0 Moderately correlated
283 LTR43-int 2 ** 74.0 Weakly correlated
284 LTR5A 2 n.s 19.6 Weakly correlated
285 LTR5B 2 n.s 28.9 Weakly correlated
286 LTR67B 2 n.s 99.0 Moderately correlated
287 LTR81C 2 ** 99.0 Moderately correlated
288 LTR84b 2 * 99.0 Moderately correlated
289 LTR85a 2 n.s 99.0 Moderately correlated
290 LTR85c 2 * 99.0 Moderately correlated
291 LTR88b 2 * 99.0 Moderately correlated
292 LTR88c 2 ** 99.0 Moderately correlated
293 MER110 2 * 99.0 Moderately correlated
294 MER21-int 2 n.s 99.0 Moderately correlated
295 MER39B 2 n.s 74.0 Weakly correlated
296 MER49 2 n.s 43.0 Weakly correlated
297 MER54A 2 n.s 87.0 Weakly correlated
298 MER66-int 2 n.s 43.0 Weakly correlated
299 MER67C 2 n.s 99.0 Moderately correlated
300 MER74B 2 n.s 99.0 Moderately correlated
301 MER89 2 n.s 99.0 Moderately correlated
302 MLT1A1 2 n.s 87.0 Weakly correlated
303 MLT1E1A 2 n.s 99.0 Moderately correlated
304 MLT1G1 2 n.s 99.0 Moderately correlated
305 MLT1I-int 2 n.s 99.0 Moderately correlated
306 MLT1K-int 2 *** 99.0 Moderately correlated
307 MLT2A2 2 n.s 74.0 Weakly correlated
308 MLT2B2 2 n.s 99.0 Moderately correlated
309 MSTB-int 2 n.s 43.0 Weakly correlated
310 MSTC 2 n.s 74.0 Weakly correlated
311 MSTD 2 n.s 74.0 Weakly correlated
312 MamGypLTR1c 2 * 99.0 Moderately correlated
313 MamGypsy2-LTR 2 ** 99.0 Moderately correlated
314 MamSINE1 2 n.s 99.0 Moderately correlated
315 PRIMA4-int 2 * 74.0 Weakly correlated
316 PRIMAX-int 2 **** 74.0 Weakly correlated
317 SVA_C 2 n.s 15.2 Weakly correlated
318 SVA_D 2 n.s 15.2 Weakly correlated
319 THE1D-int 2 n.s 28.9 Weakly correlated
320 Alu 1 n.s 74.0 Weakly correlated
321 AluSq4 1 n.s 74.0 Weakly correlated
322 AluYb8 1 n.s 15.2 Weakly correlated
323 AluYb9 1 * 15.2 Weakly correlated
324 AluYd8 1 * 15.2 Weakly correlated
325 AluYf1 1 n.s 19.6 Weakly correlated
326 AluYh3 1 n.s 15.2 Weakly correlated
327 AluYh9 1 *** 15.2 Weakly correlated
328 AluYk11 1 * 15.2 Weakly correlated
329 AluYk2 1 n.s 19.6 Weakly correlated
330 AluYk3 1 n.s 19.6 Weakly correlated
331 CR1-3_Croc 1 n.s 319.0 Weakly correlated
332 ERV24_Prim-int 1 n.s 74.0 Weakly correlated
333 HERV35I-int 1 n.s 43.0 Weakly correlated
334 HERV9NC-int 1 n.s 19.6 Weakly correlated
335 HERVK14C-int 1 * 28.9 Weakly correlated
336 HERVL66-int 1 * 43.0 Weakly correlated
337 HERVS71-int 1 n.s 28.9 Weakly correlated
338 HUERS-P3-int 1 n.s 43.0 Weakly correlated
339 L1HS 1 n.s 8.6 Weakly correlated
340 L1M3b 1 n.s 99.0 Moderately correlated
341 L1M3d 1 n.s 99.0 Moderately correlated
342 L1M3de 1 n.s 99.0 Moderately correlated
343 L1M3e 1 n.s 99.0 Moderately correlated
344 L1MA5A 1 n.s 87.0 Weakly correlated
345 L1MDb 1 n.s 99.0 Moderately correlated
346 L1MEa 1 n.s 99.0 Moderately correlated
347 L1MEg1 1 n.s 99.0 Moderately correlated
348 L1MEj 1 n.s 99.0 Moderately correlated
349 L1P4a 1 n.s 74.0 Weakly correlated
350 L1PA15-16 1 n.s 74.0 Weakly correlated
351 L1PBa1 1 n.s 74.0 Weakly correlated
352 L1PBb 1 n.s 74.0 Weakly correlated
353 L4_B_Mam 1 n.s 99.0 Moderately correlated
354 LFSINE_Vert 1 n.s 319.0 Weakly correlated
355 LTR102_Mam 1 n.s 99.0 Moderately correlated
356 LTR105_Mam 1 n.s 99.0 Moderately correlated
357 LTR108a_Mam 1 ** 99.0 Moderately correlated
358 LTR14A 1 ** 28.9 Weakly correlated
359 LTR14B 1 n.s 28.9 Weakly correlated
360 LTR16A2 1 n.s 99.0 Moderately correlated
361 LTR16B 1 n.s 99.0 Moderately correlated
362 LTR17 1 n.s 28.9 Weakly correlated
363 LTR18B 1 n.s 43.0 Weakly correlated
364 LTR19A 1 n.s 43.0 Weakly correlated
365 LTR1B 1 n.s 43.0 Weakly correlated
366 LTR1C1 1 ** 43.0 Weakly correlated
367 LTR1F2 1 * 43.0 Weakly correlated
368 LTR22B1 1 * 28.9 Weakly correlated
369 LTR22E 1 ** 28.9 Weakly correlated
370 LTR27D 1 * 43.0 Weakly correlated
371 LTR28C 1 n.s 43.0 Weakly correlated
372 LTR32 1 n.s 43.0 Weakly correlated
373 LTR35B 1 * 43.0 Weakly correlated
374 LTR37A 1 n.s 99.0 Moderately correlated
375 LTR37B 1 n.s 99.0 Moderately correlated
376 LTR38C 1 ** 74.0 Weakly correlated
377 LTR39 1 n.s 43.0 Weakly correlated
378 LTR40b 1 n.s 99.0 Moderately correlated
379 LTR40c 1 n.s 99.0 Moderately correlated
380 LTR42 1 * 74.0 Weakly correlated
381 LTR45C 1 n.s 99.0 Moderately correlated
382 LTR46 1 * 43.0 Weakly correlated
383 LTR53-int 1 n.s 99.0 Moderately correlated
384 LTR54 1 n.s 74.0 Weakly correlated
385 LTR54B 1 n.s 74.0 Weakly correlated
386 LTR56 1 n.s 74.0 Weakly correlated
387 LTR57 1 * 74.0 Weakly correlated
388 LTR57-int 1 n.s 74.0 Weakly correlated
389 LTR5_Hs 1 n.s 0.0 Weakly correlated
390 LTR6A 1 n.s 28.9 Weakly correlated
391 LTR71B 1 * 43.0 Weakly correlated
392 LTR75 1 * 99.0 Moderately correlated
393 LTR81 1 * 99.0 Moderately correlated
394 LTR81A 1 n.s 99.0 Moderately correlated
395 LTR82A 1 n.s 99.0 Moderately correlated
396 LTR83 1 n.s 99.0 Moderately correlated
397 LTR85b 1 n.s 99.0 Moderately correlated
398 LTR86A1 1 n.s 99.0 Moderately correlated
399 LTR86A2 1 * 99.0 Moderately correlated
400 LTR89 1 n.s 99.0 Moderately correlated
401 LTR9A1 1 n.s 43.0 Weakly correlated
402 LTR9D 1 n.s 43.0 Weakly correlated
403 MER101-int 1 n.s 74.0 Weakly correlated
404 MER101B 1 * 87.0 Weakly correlated
405 MER110-int 1 n.s 99.0 Moderately correlated
406 MER11D 1 n.s 19.6 Weakly correlated
407 MER31-int 1 n.s 99.0 Moderately correlated
408 MER34A1 1 n.s 99.0 Moderately correlated
409 MER34C2 1 n.s 74.0 Weakly correlated
410 MER34C_ 1 n.s 87.0 Weakly correlated
411 MER41D 1 n.s 74.0 Weakly correlated
412 MER41E 1 n.s 74.0 Weakly correlated
413 MER41G 1 ** 74.0 Weakly correlated
414 MER48 1 * 28.9 Weakly correlated
415 MER4A 1 n.s 74.0 Weakly correlated
416 MER4A1 1 n.s 74.0 Weakly correlated
417 MER4A1_ 1 n.s 74.0 Weakly correlated
418 MER4D1 1 n.s 74.0 Weakly correlated
419 MER4E1 1 n.s 74.0 Weakly correlated
420 MER50 1 n.s 43.0 Weakly correlated
421 MER51B 1 n.s 43.0 Weakly correlated
422 MER52-int 1 n.s 99.0 Moderately correlated
423 MER52A 1 n.s 74.0 Weakly correlated
424 MER57-int 1 n.s 87.0 Weakly correlated
425 MER61-int 1 n.s 43.0 Weakly correlated
426 MER61B 1 n.s 43.0 Weakly correlated
427 MER61C 1 * 43.0 Weakly correlated
428 MER61D 1 * 43.0 Weakly correlated
429 MER61F 1 * 43.0 Weakly correlated
430 MER66B 1 n.s 43.0 Weakly correlated
431 MER67D 1 n.s 99.0 Moderately correlated
432 MER68B 1 n.s 99.0 Moderately correlated
433 MER77B 1 n.s 99.0 Moderately correlated
434 MER83B-int 1 n.s 99.0 Moderately correlated
435 MER84 1 * 43.0 Weakly correlated
436 MER84-int 1 * 74.0 Weakly correlated
437 MER87B 1 * 74.0 Weakly correlated
438 MER90a 1 n.s 99.0 Moderately correlated
439 MER92C 1 ** 99.0 Moderately correlated
440 MER92D 1 ** 99.0 Moderately correlated
441 MER9a1 1 n.s 19.6 Weakly correlated
442 MER9a2 1 n.s 19.6 Weakly correlated
443 MER9a3 1 n.s 28.9 Weakly correlated
444 MLT1A-int 1 n.s 99.0 Moderately correlated
445 MLT1A1-int 1 n.s 87.0 Weakly correlated
446 MLT1E 1 n.s 99.0 Moderately correlated
447 MLT1G-int 1 * 99.0 Moderately correlated
448 MLT1H2-int 1 n.s 99.0 Moderately correlated
449 MLT1J1 1 n.s 99.0 Moderately correlated
450 MLT1J2-int 1 n.s 99.0 Moderately correlated
451 MLT1L-int 1 ** 99.0 Moderately correlated
452 MLT1M 1 n.s 99.0 Moderately correlated
453 MLT1O-int 1 **** 99.0 Moderately correlated
454 MLT2C2 1 n.s 99.0 Moderately correlated
455 MSTA1 1 n.s 74.0 Weakly correlated
456 MSTB1-int 1 n.s 74.0 Weakly correlated
457 MSTB2-int 1 * 74.0 Weakly correlated
458 MamGypLTR1a 1 n.s 99.0 Moderately correlated
459 MamGypLTR1d 1 n.s 99.0 Moderately correlated
460 MamRep1151 1 n.s 99.0 Moderately correlated
461 PABL_A-int 1 n.s 74.0 Weakly correlated
462 THE1C-int 1 n.s 43.0 Weakly correlated
463 X6B_LINE 1 * 99.0 Moderately correlated
464 X7B_LINE 1 * 319.0 Weakly correlated
465 X7C_LINE 1 * 319.0 Weakly correlated
466 X8_LINE 1 ** 319.0 Weakly correlated
467 X9_LINE 1 * 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 HERVL-int 327 **** 74.0 Weakly correlated
2 L2a 165 **** 99.0 Moderately correlated
3 L2c 123 **** 99.0 Moderately correlated
4 L1MC1 101 **** 99.0 Moderately correlated
5 L2 89 **** 99.0 Moderately correlated
6 L1PA13 82 **** 74.0 Weakly correlated
7 ERVL-B4-int 74 **** 99.0 Moderately correlated
8 L2b 64 * 99.0 Moderately correlated
9 ERVL-E-int 59 **** 99.0 Moderately correlated
10 MIRb 47 n.s 99.0 Moderately correlated
11 L1PA15 46 **** 74.0 Weakly correlated
12 L1MC2 43 **** 99.0 Moderately correlated
13 MIR 39 n.s 99.0 Moderately correlated
14 MLT1C 31 ** 94.0 Highly correlated
15 L3 28 n.s 99.0 Moderately correlated
16 L1PREC2 27 * 43.0 Weakly correlated
17 AluSx1 27 n.s 74.0 Weakly correlated
18 HAL1 26 n.s 99.0 Moderately correlated
19 L1MC3 26 n.s 99.0 Moderately correlated
20 AluSx 25 n.s 74.0 Weakly correlated
21 MIRc 22 n.s 99.0 Moderately correlated
22 AluSz 19 n.s 74.0 Weakly correlated
23 ERV3-16A3_I-int 19 ** 99.0 Moderately correlated
24 L1MC4 19 n.s 99.0 Moderately correlated
25 AluJb 18 n.s 74.0 Weakly correlated
26 L1MC4a 18 * 99.0 Moderately correlated
27 MIR3 18 n.s 99.0 Moderately correlated
28 MLT1D 18 n.s 99.0 Moderately correlated
29 L1M5 17 n.s 99.0 Moderately correlated
30 L1PB1 17 n.s 74.0 Weakly correlated
31 L1PA14 17 ** 74.0 Weakly correlated
32 MSTA 17 n.s 43.0 Weakly correlated
33 LTR9B 16 **** 43.0 Weakly correlated
34 L1ME1 16 n.s 99.0 Moderately correlated
35 HERVH-int 15 n.s 28.9 Weakly correlated
36 L1MB7 15 n.s 99.0 Moderately correlated
37 L1M4 14 n.s 99.0 Moderately correlated
38 THE1A 14 **** 43.0 Weakly correlated
39 L1MEd 14 n.s 99.0 Moderately correlated
40 L1PA16 14 n.s 74.0 Weakly correlated
41 L1ME4a 13 n.s 99.0 Moderately correlated
42 AluY 13 n.s 74.0 Weakly correlated
43 MLT1J 13 n.s 99.0 Moderately correlated
44 L1PA12 12 *** 74.0 Weakly correlated
45 THE1B 12 n.s 43.0 Weakly correlated
46 ERVL-int 12 **** 99.0 Moderately correlated
47 MLT1L 12 * 99.0 Moderately correlated
48 AluJo 11 n.s 74.0 Weakly correlated
49 L1ME4b 11 n.s 99.0 Moderately correlated
50 AluJr 11 n.s 74.0 Weakly correlated
51 L1MEc 11 n.s 99.0 Moderately correlated
52 L1PA17 11 n.s 74.0 Weakly correlated
53 L1MA9 11 n.s 99.0 Moderately correlated
54 MLT1B 10 n.s 99.0 Moderately correlated
55 L1M1 10 n.s 74.0 Weakly correlated
56 L1ME3Cz 10 n.s 99.0 Moderately correlated
57 L1MB3 9 n.s 99.0 Moderately correlated
58 MER39 9 ** 74.0 Weakly correlated
59 AluSq2 9 n.s 74.0 Weakly correlated
60 LTR16C 9 * 99.0 Moderately correlated
61 L1MB8 9 n.s 99.0 Moderately correlated
62 HERVP71A-int 9 **** 43.0 Weakly correlated
63 L1ME3B 9 n.s 99.0 Moderately correlated
64 L1PB4 8 n.s 99.0 Moderately correlated
65 L1ME3A 8 n.s 99.0 Moderately correlated
66 HERVK14-int 8 **** 28.9 Weakly correlated
67 L1MC5a 8 n.s 99.0 Moderately correlated
68 L1PA7 8 n.s 74.0 Weakly correlated
69 MLT1K 8 n.s 99.0 Moderately correlated
70 AluSc 7 n.s 74.0 Weakly correlated
71 AluSz6 7 n.s 74.0 Weakly correlated
72 L1MA2 7 n.s 74.0 Weakly correlated
73 L1MD3 7 n.s 99.0 Moderately correlated
74 L1PA8 7 n.s 74.0 Weakly correlated
75 L1M4b 7 n.s 99.0 Moderately correlated
76 L1MC5 7 n.s 99.0 Moderately correlated
77 L1MD2 7 n.s 99.0 Moderately correlated
78 AluSp 7 n.s 74.0 Weakly correlated
79 L1MEg 7 n.s 99.0 Moderately correlated
80 L1M2 6 n.s 99.0 Moderately correlated
81 L1MEf 6 n.s 99.0 Moderately correlated
82 MLT1A 6 n.s 99.0 Moderately correlated
83 MER41C 6 **** 74.0 Weakly correlated
84 MLT1E3 6 ** 99.0 Moderately correlated
85 MLT1O 6 * 99.0 Moderately correlated
86 MSTB 6 n.s 43.0 Weakly correlated
87 L1PBa 6 n.s 74.0 Weakly correlated
88 L3b 6 n.s 99.0 Moderately correlated
89 MLT1N2 6 * 99.0 Moderately correlated
90 HERV16-int 6 ** 99.0 Moderately correlated
91 MLT1J2 6 n.s 99.0 Moderately correlated
92 MLT1I 6 n.s 99.0 Moderately correlated
93 L1ME3C 5 n.s 99.0 Moderately correlated
94 LTR33A 5 ** 99.0 Moderately correlated
95 FLAM_C 5 n.s 74.0 Weakly correlated
96 L1M4c 5 n.s 99.0 Moderately correlated
97 LTR2 5 *** 28.9 Weakly correlated
98 L1MA8 5 n.s 87.0 Weakly correlated
99 L1ME2z 5 n.s 99.0 Moderately correlated
100 AluSc8 5 n.s 74.0 Weakly correlated
101 L1MA4 5 n.s 87.0 Weakly correlated
102 L1MB5 5 n.s 99.0 Moderately correlated
103 MIR1_Amn 5 n.s 319.0 Weakly correlated
104 THE1D 5 n.s 43.0 Weakly correlated
105 L1M8 5 * 99.0 Moderately correlated
106 L1ME3 5 n.s 99.0 Moderately correlated
107 L1MA4A 5 n.s 87.0 Weakly correlated
108 L1MD1 5 n.s 99.0 Moderately correlated
109 L1MC 4 n.s 99.0 Moderately correlated
110 L1ME2 4 n.s 99.0 Moderately correlated
111 L1ME3G 4 n.s 99.0 Moderately correlated
112 L1PA5 4 n.s 19.6 Weakly correlated
113 LTR16 4 n.s 99.0 Moderately correlated
114 LTR16B1 4 ** 99.0 Moderately correlated
115 MLT1A0 4 n.s 99.0 Moderately correlated
116 LTR33C 4 *** 99.0 Moderately correlated
117 THE1C 4 n.s 43.0 Weakly correlated
118 L1PA11 4 n.s 74.0 Weakly correlated
119 LTR9 4 ** 43.0 Weakly correlated
120 L1PB3 4 n.s 74.0 Weakly correlated
121 AluSq 4 n.s 74.0 Weakly correlated
122 L1M4a1 4 n.s 99.0 Moderately correlated
123 MER4-int 4 n.s 74.0 Weakly correlated
124 L1PB2 4 n.s 74.0 Weakly correlated
125 MER41-int 4 n.s 74.0 Weakly correlated
126 MSTB1 4 n.s 74.0 Weakly correlated
127 L1M4a2 4 n.s 99.0 Moderately correlated
128 L1MCa 4 n.s 99.0 Moderately correlated
129 L1PA8A 4 n.s 74.0 Weakly correlated
130 AluSg 4 n.s 74.0 Weakly correlated
131 AluSx3 4 n.s 74.0 Weakly correlated
132 L1MB2 4 n.s 99.0 Moderately correlated
133 Plat_L3 4 * 99.0 Moderately correlated
134 HERVE-int 3 n.s 19.6 Weakly correlated
135 L1P4 3 n.s 74.0 Weakly correlated
136 LTR2C 3 *** 19.6 Weakly correlated
137 LTR49-int 3 n.s 74.0 Weakly correlated
138 LTR78 3 n.s 99.0 Moderately correlated
139 MLT2F 3 n.s 99.0 Moderately correlated
140 L1MDa 3 n.s 99.0 Moderately correlated
141 HAL1M8 3 n.s 99.0 Moderately correlated
142 L1MA3 3 n.s 74.0 Weakly correlated
143 L1ME3E 3 n.s 99.0 Moderately correlated
144 LTR19B 3 *** 43.0 Weakly correlated
145 LTR33A_ 3 * 99.0 Moderately correlated
146 MER21C 3 n.s 99.0 Moderately correlated
147 MER52D 3 n.s 74.0 Weakly correlated
148 MamGypLTR3a 3 * 99.0 Moderately correlated
149 LTR33 3 n.s 99.0 Moderately correlated
150 LTR78B 3 n.s 99.0 Moderately correlated
151 MER11A 3 n.s 28.9 Weakly correlated
152 MER4B-int 3 n.s 99.0 Moderately correlated
153 L1ME3D 3 n.s 99.0 Moderately correlated
154 L1P3 3 n.s 74.0 Weakly correlated
155 L4_C_Mam 3 n.s 99.0 Moderately correlated
156 MER21B 3 n.s 99.0 Moderately correlated
157 MER68 3 n.s 99.0 Moderately correlated
158 MLT1H 3 n.s 99.0 Moderately correlated
159 AluSc5 3 n.s 74.0 Weakly correlated
160 LOR1-int 3 n.s 74.0 Weakly correlated
161 MER34A 3 * 99.0 Moderately correlated
162 MLT1G3 3 n.s 99.0 Moderately correlated
163 MLT2B3 3 n.s 99.0 Moderately correlated
164 THE1B-int 3 n.s 43.0 Weakly correlated
165 ERV3-16A3_LTR 3 ** 99.0 Moderately correlated
166 LTR16A 3 n.s 99.0 Moderately correlated
167 MER11C 3 n.s 19.6 Weakly correlated
168 Harlequin-int 3 n.s 74.0 Weakly correlated
169 L1MB1 2 n.s 99.0 Moderately correlated
170 L1MEg2 2 * 99.0 Moderately correlated
171 LTR16B2 2 n.s 99.0 Moderately correlated
172 LTR38-int 2 *** 74.0 Weakly correlated
173 MER34B 2 * 87.0 Weakly correlated
174 MER65-int 2 n.s 87.0 Weakly correlated
175 MLT1F2 2 n.s 99.0 Moderately correlated
176 HAL1ME 2 n.s 99.0 Moderately correlated
177 MER4D 2 n.s 74.0 Weakly correlated
178 MLT1E2 2 n.s 99.0 Moderately correlated
179 MLT2B4 2 n.s 99.0 Moderately correlated
180 MamGypsy2-LTR 2 ** 99.0 Moderately correlated
181 THE1D-int 2 n.s 28.9 Weakly correlated
182 HERVK9-int 2 n.s 28.9 Weakly correlated
183 L1PA10 2 n.s 74.0 Weakly correlated
184 MER74A 2 n.s 99.0 Moderately correlated
185 MLT1H-int 2 n.s 99.0 Moderately correlated
186 MLT1H2 2 n.s 99.0 Moderately correlated
187 MLT1K-int 2 *** 99.0 Moderately correlated
188 MLT2B2 2 n.s 99.0 Moderately correlated
189 HUERS-P1-int 2 n.s 43.0 Weakly correlated
190 L1MA6 2 n.s 87.0 Weakly correlated
191 LTR88c 2 ** 99.0 Moderately correlated
192 MER31B 2 n.s 99.0 Moderately correlated
193 MSTA-int 2 n.s 43.0 Weakly correlated
194 L1M3a 2 n.s 99.0 Moderately correlated
195 L1M6B 2 ** 99.0 Moderately correlated
196 L1MA7 2 n.s 87.0 Weakly correlated
197 L1MDb 2 n.s 99.0 Moderately correlated
198 L1PA4 2 n.s 19.6 Weakly correlated
199 LTR16E2 2 n.s 99.0 Moderately correlated
200 LTR41 2 n.s 99.0 Moderately correlated
201 MER50-int 2 n.s 43.0 Weakly correlated
202 MER67C 2 n.s 99.0 Moderately correlated
203 SVA_C 2 n.s 15.2 Weakly correlated
204 HAL1b 2 n.s 99.0 Moderately correlated
205 L1MCc 2 n.s 99.0 Moderately correlated
206 LTR103b_Mam 2 ** 99.0 Moderately correlated
207 LTR81B 2 * 99.0 Moderately correlated
208 LTR81C 2 ** 99.0 Moderately correlated
209 MER34 2 n.s 87.0 Weakly correlated
210 HERVE_a-int 2 n.s 28.9 Weakly correlated
211 L1ME3F 2 n.s 99.0 Moderately correlated
212 L1ME4c 2 n.s 99.0 Moderately correlated
213 L4_A_Mam 2 n.s 99.0 Moderately correlated
214 LTR55 2 * 99.0 Moderately correlated
215 LTR8 2 n.s 43.0 Weakly correlated
216 LTR8A 2 n.s 43.0 Weakly correlated
217 MLT2C1 2 n.s 99.0 Moderately correlated
218 MamRTE1 2 n.s 99.0 Moderately correlated
219 L1M7 2 n.s 99.0 Moderately correlated
220 L1MB4 2 n.s 99.0 Moderately correlated
221 L1ME5 2 n.s 99.0 Moderately correlated
222 L1MEh 2 n.s 99.0 Moderately correlated
223 L1PB 2 n.s 74.0 Weakly correlated
224 LTR41B 2 * 99.0 Moderately correlated
225 LTR48B 2 n.s 74.0 Weakly correlated
226 LTR84b 2 * 99.0 Moderately correlated
227 LTR88a 2 ** 99.0 Moderately correlated
228 CR1-12_AMi 1 ** 319.0 Weakly correlated
229 L1M3 1 n.s 99.0 Moderately correlated
230 LTR102_Mam 1 n.s 99.0 Moderately correlated
231 LTR16A2 1 n.s 99.0 Moderately correlated
232 LTR50 1 n.s 99.0 Moderately correlated
233 LTR79 1 n.s 99.0 Moderately correlated
234 MER110 1 n.s 99.0 Moderately correlated
235 MER66-int 1 n.s 43.0 Weakly correlated
236 MER68B 1 n.s 99.0 Moderately correlated
237 MLT1E1A 1 n.s 99.0 Moderately correlated
238 MLT1F1 1 n.s 99.0 Moderately correlated
239 MLT1G 1 n.s 99.0 Moderately correlated
240 MLT1H2-int 1 n.s 99.0 Moderately correlated
241 MamRep605 1 n.s 99.0 Moderately correlated
242 L1HS 1 n.s 8.6 Weakly correlated
243 L1M6 1 n.s 99.0 Moderately correlated
244 L1PA6 1 n.s 28.9 Weakly correlated
245 LTR13 1 n.s 19.6 Weakly correlated
246 LTR22B1 1 * 28.9 Weakly correlated
247 LTR37B 1 n.s 99.0 Moderately correlated
248 LTR71B 1 * 43.0 Weakly correlated
249 LTR82A 1 n.s 99.0 Moderately correlated
250 MER31-int 1 n.s 99.0 Moderately correlated
251 MER34A1 1 n.s 99.0 Moderately correlated
252 MER41E 1 n.s 74.0 Weakly correlated
253 MER41G 1 ** 74.0 Weakly correlated
254 MER4E1 1 n.s 74.0 Weakly correlated
255 MER61B 1 n.s 43.0 Weakly correlated
256 MER77 1 n.s 99.0 Moderately correlated
257 MER84-int 1 * 74.0 Weakly correlated
258 MER89 1 n.s 99.0 Moderately correlated
259 MSTB1-int 1 n.s 74.0 Weakly correlated
260 MamGypLTR1d 1 n.s 99.0 Moderately correlated
261 MamSINE1 1 n.s 99.0 Moderately correlated
262 AluSg7 1 n.s 74.0 Weakly correlated
263 HERVH48-int 1 n.s 28.9 Weakly correlated
264 HUERS-P3-int 1 n.s 43.0 Weakly correlated
265 L1M3e 1 n.s 99.0 Moderately correlated
266 L1PA15-16 1 n.s 74.0 Weakly correlated
267 LTR14A 1 ** 28.9 Weakly correlated
268 LTR35B 1 * 43.0 Weakly correlated
269 LTR46 1 * 43.0 Weakly correlated
270 LTR53-int 1 n.s 99.0 Moderately correlated
271 LTR57-int 1 n.s 74.0 Weakly correlated
272 LTR85c 1 n.s 99.0 Moderately correlated
273 MER34C_ 1 n.s 87.0 Weakly correlated
274 MER9a3 1 n.s 28.9 Weakly correlated
275 MLT1G1 1 n.s 99.0 Moderately correlated
276 MLT2B1 1 n.s 99.0 Moderately correlated
277 MamGypLTR1a 1 n.s 99.0 Moderately correlated
278 PABL_A-int 1 n.s 74.0 Weakly correlated
279 X7C_LINE 1 * 319.0 Weakly correlated
280 AluSq4 1 n.s 74.0 Weakly correlated
281 HERVK22-int 1 n.s 43.0 Weakly correlated
282 HERVS71-int 1 n.s 28.9 Weakly correlated
283 L1MCb 1 n.s 99.0 Moderately correlated
284 L1PA2 1 n.s 15.2 Weakly correlated
285 LTR16B 1 n.s 99.0 Moderately correlated
286 LTR5B 1 n.s 28.9 Weakly correlated
287 LTR85a 1 n.s 99.0 Moderately correlated
288 LTR88b 1 n.s 99.0 Moderately correlated
289 LTR9D 1 n.s 43.0 Weakly correlated
290 MER11B 1 n.s 19.6 Weakly correlated
291 MER4A1_ 1 n.s 74.0 Weakly correlated
292 MER4C 1 n.s 74.0 Weakly correlated
293 MER54A 1 n.s 87.0 Weakly correlated
294 MLT1G-int 1 * 99.0 Moderately correlated
295 X7B_LINE 1 * 319.0 Weakly correlated
296 AluYc 1 n.s 74.0 Weakly correlated
297 HERVIP10B3-int 1 n.s 28.9 Weakly correlated
298 L1MA1 1 n.s 74.0 Weakly correlated
299 L1MEj 1 n.s 99.0 Moderately correlated
300 LTR16A1 1 n.s 99.0 Moderately correlated
301 LTR85b 1 n.s 99.0 Moderately correlated
302 LTR9A1 1 n.s 43.0 Weakly correlated
303 MER101B 1 * 87.0 Weakly correlated
304 MER41B 1 n.s 74.0 Weakly correlated
305 MER57-int 1 n.s 87.0 Weakly correlated
306 MLT1L-int 1 ** 99.0 Moderately correlated
307 PRIMA4-int 1 n.s 74.0 Weakly correlated
308 AluJr4 1 n.s 74.0 Weakly correlated
309 AluSx4 1 n.s 74.0 Weakly correlated
310 AluYk2 1 n.s 19.6 Weakly correlated
311 HERVK11-int 1 n.s 28.9 Weakly correlated
312 L1MA5A 1 n.s 87.0 Weakly correlated
313 L1PA3 1 n.s 19.6 Weakly correlated
314 L2-1_AMi 1 n.s 319.0 Weakly correlated
315 L2-3_Crp 1 n.s 431.0 Weakly correlated
316 LTR16E1 1 n.s 99.0 Moderately correlated
317 LTR42 1 * 74.0 Weakly correlated
318 LTR81 1 * 99.0 Moderately correlated
319 MER57A-int 1 n.s 43.0 Weakly correlated
320 MER77B 1 n.s 99.0 Moderately correlated
321 MER83B-int 1 n.s 99.0 Moderately correlated
322 MSTB-int 1 n.s 43.0 Weakly correlated
323 MamGypLTR1c 1 n.s 99.0 Moderately correlated
324 SVA_D 1 n.s 15.2 Weakly correlated
325 AluYd8 1 * 15.2 Weakly correlated
326 L1M3de 1 n.s 99.0 Moderately correlated
327 L1MEi 1 n.s 99.0 Moderately correlated
328 LTR17 1 n.s 28.9 Weakly correlated
329 LTR32 1 n.s 43.0 Weakly correlated
330 LTR37A 1 n.s 99.0 Moderately correlated
331 MER21A 1 n.s 74.0 Weakly correlated
332 MER34C2 1 n.s 74.0 Weakly correlated
333 MLT1I-int 1 n.s 99.0 Moderately correlated
334 MLT1M 1 n.s 99.0 Moderately correlated
335 AluSg4 1 n.s 74.0 Weakly correlated
336 FLAM_A 1 n.s 74.0 Weakly correlated
337 HERVK14C-int 1 * 28.9 Weakly correlated
338 L1MA10 1 n.s 99.0 Moderately correlated
339 L1MEa 1 n.s 99.0 Moderately correlated
340 L1MEg1 1 n.s 99.0 Moderately correlated
341 LTR1B 1 n.s 43.0 Weakly correlated
342 LTR37-int 1 n.s 99.0 Moderately correlated
343 LTR39 1 n.s 43.0 Weakly correlated
344 LTR40b 1 n.s 99.0 Moderately correlated
345 LTR41C 1 n.s 99.0 Moderately correlated
346 LTR67B 1 n.s 99.0 Moderately correlated
347 LTR81A 1 n.s 99.0 Moderately correlated
348 MER101-int 1 n.s 74.0 Weakly correlated
349 MER4A1 1 n.s 74.0 Weakly correlated
350 MER74B 1 n.s 99.0 Moderately correlated
351 MLT1J2-int 1 n.s 99.0 Moderately correlated
352 MSTB2-int 1 * 74.0 Weakly correlated
353 THE1A-int 1 n.s 43.0 Weakly correlated
354 X6B_LINE 1 * 99.0 Moderately correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 ERV3-16A3_I-INT 99.0 Moderately correlated
2 ERVL-B4-INT 99.0 Moderately correlated
3 ERVL-INT 99.0 Moderately correlated
4 HERVH-INT 28.9 Weakly correlated
5 HERVL-INT 74.0 Weakly correlated
6 HERVP71A-INT 43.0 Weakly correlated
7 L1PA8 74.0 Weakly correlated
8 LTR16C 99.0 Moderately correlated
9 LTR9B 43.0 Weakly correlated
10 MSTA 43.0 Weakly correlated
11 THE1A 43.0 Weakly correlated
12 THE1B 43.0 Weakly correlated