ZRdb KZFP & Repeats
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Human_ZKSCAN1

  • Protein
    Zinc finger protein with KRAB and SCAN domains 1
  • Length
    563
  • Organism
    Homo sapiens (Human)
  • Time of emergence
    160.0 Mya
  • Time of Changing in binding specificity
    160.0 Mya
  • Uniprot_ID
    P17029
  • NCBI_ID
    7586
Sequence:
MMTAESREATGLSPQAAQEKDGIVIVKVEEEDEEDHMWGQDSTLQDTPPPDPEIFRQRFRRFCYQNTFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPKELQVWLQEYRPDSGEEAVTLLEDLELDLSGQQVPGQVHGPEMLARGMVPLDPVQESSSFDLHHEATQSHFKHSSRKPRLLQSRALPAAHIPAPPHEGSPRDQAMASALFTADSQAMVKIEDMAVSLILEEWGCQNLARRNLSRDNRQENYGSAFPQGGENRNENEESTSKAETSEDSASRGETTGRSQKEFGEKRDQEGKTGERQQKNPEEKTRKEKRDSGPAIGKDKKTITGERGPREKGKGLGRSFSLSSNFTTPEEVPTGTKSHRCDECGKCFTRSSSLIRHKIIHTGEKPYECSECGKAFSLNSNLVLHQRIHTGEKPHECNECGKAFSHSSNLILHQRIHSGEKPYECNECGKAFSQSSDLTKHQRIHTGEKPYECSECGKAFNRNSYLILHRRIHTREKPYKCTKCGKAFTRSSTLTLHHRIHARERASEYSPASLDAFGAFLKSCV
Domain KRAB, ZF, and degenerated ZF domains of KZFPs. :
...
# Domain name Pos
1 scan 56..138
2 KRAB 227..300
3 C2h2 377..399
4 C2h2 405..427
5 C2h2 433..455
6 C2h2 461..483
7 C2h2 489..511
8 C2h2 517..539
Gene Ontology Annotation The Gene Ontology (GO) describes knowledge of the biological domain based on three aspects: Molecular function, Biological process, and Cellular component. :
# Type TERM
1 Cellular Component nucleus
2 Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific
3 Molecular Function metal ion binding
4 Molecular Function RNA polymerase II cis-regulatory region sequence-specific DNA binding
5 Biological Process regulation of transcription by RNA polymerase II
Is there ChIP-seq data Is there any ChIP-seq data available for these KZFPs in the Cistrome database? :
Yes
Motif(meme-ChIP) DNA binding motifs of KZFPs obtained using meme-ChIP and mapped using pylogo. :
Forward:
...
Reverse:
...
Peak overlapping A ChIP-seq peak of KZFPs that intersects with a certain repeats sequences on the genome. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 5638 **** 99.0 Weakly correlated
2 MIRb 4422 **** 99.0 Weakly correlated
3 L2b 4020 **** 99.0 Weakly correlated
4 L2c 2884 **** 99.0 Weakly correlated
5 MIR 2310 **** 99.0 Weakly correlated
6 MIRc 1091 **** 99.0 Weakly correlated
7 MIR3 900 **** 99.0 Weakly correlated
8 AluJb 613 n.s 74.0 Weakly correlated
9 AluSx1 516 n.s 74.0 Weakly correlated
10 AluSz 485 n.s 74.0 Weakly correlated
11 AluSx 482 n.s 74.0 Weakly correlated
12 AluJr 427 n.s 74.0 Weakly correlated
13 AluJo 418 n.s 74.0 Weakly correlated
14 L2 402 n.s 99.0 Weakly correlated
15 AluSq2 272 n.s 74.0 Weakly correlated
16 L3 268 ** 99.0 Weakly correlated
17 AluY 251 n.s 74.0 Weakly correlated
18 MIR1_Amn 203 **** 319.0 Weakly correlated
19 AluSp 196 n.s 74.0 Weakly correlated
20 AluSz6 175 n.s 74.0 Weakly correlated
21 FLAM_C 152 **** 74.0 Weakly correlated
22 AluSx3 150 n.s 74.0 Weakly correlated
23 AluSg 135 n.s 74.0 Weakly correlated
24 MLT1I 130 **** 99.0 Weakly correlated
25 AluSc 119 n.s 74.0 Weakly correlated
26 MLT1K 113 n.s 99.0 Weakly correlated
27 L1M5 112 n.s 99.0 Weakly correlated
28 HAL1 111 n.s 99.0 Weakly correlated
29 MLT1B 110 n.s 99.0 Weakly correlated
30 MamRTE1 109 **** 99.0 Weakly correlated
31 MLT1L 107 **** 99.0 Weakly correlated
32 L1MC4 106 n.s 99.0 Weakly correlated
33 L1MB7 98 n.s 99.0 Weakly correlated
34 AluSc8 93 n.s 74.0 Weakly correlated
35 MLT1C 92 n.s 94.0 Weakly correlated
36 L3b 87 **** 99.0 Weakly correlated
37 MLT1J 87 n.s 99.0 Weakly correlated
38 L1MA3 82 n.s 74.0 Weakly correlated
39 AluJr4 78 n.s 74.0 Weakly correlated
40 MER41B 77 **** 74.0 Weakly correlated
41 MLT1D 75 n.s 99.0 Weakly correlated
42 LTR50 74 **** 99.0 Weakly correlated
43 AluSq 71 n.s 74.0 Weakly correlated
44 L1ME4b 71 n.s 99.0 Weakly correlated
45 MLT1H 71 n.s 99.0 Weakly correlated
46 LTR41 68 **** 99.0 Weakly correlated
47 MLT1A0 68 n.s 99.0 Weakly correlated
48 L1MEd 63 n.s 99.0 Weakly correlated
49 FRAM 62 **** 74.0 Weakly correlated
50 L1ME1 62 n.s 99.0 Weakly correlated
51 L1MB3 61 n.s 99.0 Weakly correlated
52 MLT1F2 60 n.s 99.0 Weakly correlated
53 L1MB8 59 n.s 99.0 Weakly correlated
54 LTR41C 58 **** 99.0 Weakly correlated
55 MLT1J2 56 ** 99.0 Weakly correlated
56 ERVL-E-int 54 n.s 99.0 Weakly correlated
57 L1MC3 53 n.s 99.0 Weakly correlated
58 L1MA2 52 n.s 74.0 Weakly correlated
59 L1ME3G 51 n.s 99.0 Weakly correlated
60 L1ME4a 51 n.s 99.0 Weakly correlated
61 L1MEc 50 n.s 99.0 Weakly correlated
62 L1PA16 50 n.s 74.0 Weakly correlated
63 AluSx4 48 n.s 74.0 Weakly correlated
64 L1ME3A 48 n.s 99.0 Weakly correlated
65 MLT1F 48 * 99.0 Weakly correlated
66 L1M4 47 n.s 99.0 Weakly correlated
67 LTR41B 47 **** 99.0 Weakly correlated
68 L1MB5 46 n.s 99.0 Weakly correlated
69 LTR33 46 n.s 99.0 Weakly correlated
70 MLT1H2 46 **** 99.0 Weakly correlated
71 HUERS-P3-int 44 **** 43.0 Weakly correlated
72 MLT1A 44 n.s 99.0 Weakly correlated
73 MLT1N2 44 *** 99.0 Weakly correlated
74 AmnSINE1 42 **** 319.0 Weakly correlated
75 LTR16C 42 n.s 99.0 Weakly correlated
76 L1MEg 41 n.s 99.0 Weakly correlated
77 MLT1J1 41 ** 99.0 Weakly correlated
78 L1MC5 40 n.s 99.0 Weakly correlated
79 FLAM_A 39 n.s 74.0 Weakly correlated
80 LTR8 39 n.s 43.0 Weakly correlated
81 ERV3-16A3_I-int 38 n.s 99.0 Weakly correlated
82 L1M1 38 n.s 74.0 Weakly correlated
83 Plat_L3 38 **** 99.0 Weakly correlated
84 L1MA4 37 n.s 87.0 Weakly correlated
85 L1MC5a 37 n.s 99.0 Weakly correlated
86 MER50 37 * 43.0 Weakly correlated
87 LTR53 36 **** 99.0 Weakly correlated
88 MLT1G 36 ** 99.0 Weakly correlated
89 L1MEf 35 n.s 99.0 Weakly correlated
90 L1M4b 34 n.s 99.0 Weakly correlated
91 AluSg7 33 n.s 74.0 Weakly correlated
92 L1MB2 33 n.s 99.0 Weakly correlated
93 L4_A_Mam 32 n.s 99.0 Weakly correlated
94 MER61E 32 **** 43.0 Weakly correlated
95 L1ME3 31 n.s 99.0 Weakly correlated
96 LTR8B 31 ** 43.0 Weakly correlated
97 MamSINE1 31 ** 99.0 Weakly correlated
98 Alu 30 **** 74.0 Weakly correlated
99 L1MC1 30 n.s 99.0 Weakly correlated
100 L1ME2 30 n.s 99.0 Weakly correlated
101 L1ME3Cz 30 n.s 99.0 Weakly correlated
102 L1PB1 30 n.s 74.0 Weakly correlated
103 MLT1O 30 * 99.0 Weakly correlated
104 MSTA 30 n.s 43.0 Weakly correlated
105 L1MD2 29 n.s 99.0 Weakly correlated
106 MER41A 29 n.s 74.0 Weakly correlated
107 MamGypLTR3a 29 **** 99.0 Weakly correlated
108 AluYj4 28 * 0.0 Weakly correlated
109 LTR13 28 **** 19.6 Weakly correlated
110 MER49 28 *** 43.0 Weakly correlated
111 MLT1F1 28 n.s 99.0 Weakly correlated
112 AluSg4 27 n.s 74.0 Weakly correlated
113 L1MB4 27 n.s 99.0 Weakly correlated
114 L1MC4a 27 n.s 99.0 Weakly correlated
115 LFSINE_Vert 27 **** 319.0 Weakly correlated
116 L1ME4c 26 n.s 99.0 Weakly correlated
117 L1PA7 26 n.s 74.0 Weakly correlated
118 LTR55 26 **** 99.0 Weakly correlated
119 MER72 26 **** 43.0 Weakly correlated
120 MLT2B4 26 n.s 99.0 Weakly correlated
121 L1MA9 25 n.s 99.0 Weakly correlated
122 LTR16A 25 n.s 99.0 Weakly correlated
123 LTR16A1 25 * 99.0 Weakly correlated
124 LTR19B 25 **** 43.0 Weakly correlated
125 LTR19C 25 **** 43.0 Weakly correlated
126 AluSc5 24 n.s 74.0 Weakly correlated
127 HERVK-int 23 * 28.9 Weakly correlated
128 HUERS-P3b-int 23 *** 43.0 Weakly correlated
129 L1ME2z 23 n.s 99.0 Weakly correlated
130 L1PA15-16 23 n.s 74.0 Weakly correlated
131 MER21C 23 n.s 99.0 Weakly correlated
132 MER4-int 23 n.s 74.0 Weakly correlated
133 MLT1M 23 **** 99.0 Weakly correlated
134 L1MA1 22 n.s 74.0 Weakly correlated
135 L1PB4 22 n.s 99.0 Weakly correlated
136 LTR78 22 n.s 99.0 Weakly correlated
137 ERVL-B4-int 21 n.s 99.0 Weakly correlated
138 L1MCc 21 n.s 99.0 Weakly correlated
139 L1MDa 21 n.s 99.0 Weakly correlated
140 MER54A 21 *** 87.0 Weakly correlated
141 MER66C 21 **** 43.0 Weakly correlated
142 MLT1A1 21 n.s 87.0 Weakly correlated
143 MLT1G3 21 n.s 99.0 Weakly correlated
144 MamRep605 21 n.s 99.0 Weakly correlated
145 HAL1ME 20 n.s 99.0 Weakly correlated
146 HERVIP10FH-int 20 ** 28.9 Weakly correlated
147 L1P2 20 n.s 28.9 Weakly correlated
148 L1PA17 20 n.s 74.0 Weakly correlated
149 LTR12C 20 n.s 19.6 Weakly correlated
150 LTR18B 20 **** 43.0 Weakly correlated
151 LTR4 20 **** 28.9 Weakly correlated
152 LTR67B 20 n.s 99.0 Weakly correlated
153 LTR79 20 n.s 99.0 Weakly correlated
154 MLT1G1 20 n.s 99.0 Weakly correlated
155 PRIMA4-int 20 **** 74.0 Weakly correlated
156 L1PA5 19 n.s 19.6 Weakly correlated
157 L1PA8 19 n.s 74.0 Weakly correlated
158 MER41E 19 **** 74.0 Weakly correlated
159 MER54B 19 **** 87.0 Weakly correlated
160 MER77B 19 * 99.0 Weakly correlated
161 L1M2 18 n.s 99.0 Weakly correlated
162 L1M6 18 n.s 99.0 Weakly correlated
163 L1MD 18 n.s 99.0 Weakly correlated
164 L1MD3 18 n.s 99.0 Weakly correlated
165 L1ME3B 18 n.s 99.0 Weakly correlated
166 L1MEi 18 n.s 99.0 Weakly correlated
167 L1PA2 18 n.s 15.2 Weakly correlated
168 LTR16 18 n.s 99.0 Weakly correlated
169 MER68 18 n.s 99.0 Weakly correlated
170 MLT1H1 18 n.s 99.0 Weakly correlated
171 MSTB1 18 n.s 74.0 Weakly correlated
172 L1M3 17 n.s 99.0 Weakly correlated
173 L1PA15 17 n.s 74.0 Weakly correlated
174 LTR21A 17 **** 28.9 Weakly correlated
175 LTR45C 17 **** 99.0 Weakly correlated
176 LTR73 17 **** 99.0 Weakly correlated
177 MER74B 17 ** 99.0 Weakly correlated
178 MLT1E1A 17 n.s 99.0 Weakly correlated
179 MSTB 17 n.s 43.0 Weakly correlated
180 MSTD 17 n.s 74.0 Weakly correlated
181 MamGypsy2-I 17 n.s 99.0 Weakly correlated
182 HERVE-int 16 n.s 19.6 Weakly correlated
183 L1MD1 16 n.s 99.0 Weakly correlated
184 L1PA11 16 n.s 74.0 Weakly correlated
185 L2-3_Crp 16 * 431.0 Weakly correlated
186 LTR16E1 16 n.s 99.0 Weakly correlated
187 LTR16E2 16 n.s 99.0 Weakly correlated
188 LTR1A2 16 n.s 43.0 Weakly correlated
189 LTR2 16 * 28.9 Weakly correlated
190 LTR52 16 ** 99.0 Weakly correlated
191 LTR62 16 **** 74.0 Weakly correlated
192 MLT2C1 16 n.s 99.0 Weakly correlated
193 MamGypLTR3 16 **** 99.0 Weakly correlated
194 THE1B 16 n.s 43.0 Weakly correlated
195 HERV17-int 15 n.s 28.9 Weakly correlated
196 L1M7 15 n.s 99.0 Weakly correlated
197 L1MA8 15 n.s 87.0 Weakly correlated
198 LTR16A2 15 n.s 99.0 Weakly correlated
199 LTR37A 15 n.s 99.0 Weakly correlated
200 LTR78B 15 n.s 99.0 Weakly correlated
201 LTR85a 15 * 99.0 Weakly correlated
202 THE1D 15 n.s 43.0 Weakly correlated
203 HERVH-int 14 n.s 28.9 Weakly correlated
204 L1M4c 14 n.s 99.0 Weakly correlated
205 L1PA10 14 n.s 74.0 Weakly correlated
206 LTR104_Mam 14 * 99.0 Weakly correlated
207 LTR33A 14 n.s 99.0 Weakly correlated
208 MER39 14 n.s 74.0 Weakly correlated
209 MLT2F 14 n.s 99.0 Weakly correlated
210 X6B_LINE 14 **** 99.0 Weakly correlated
211 ERV3-16A3_LTR 13 * 99.0 Weakly correlated
212 L1ME5 13 n.s 99.0 Weakly correlated
213 L1PA13 13 n.s 74.0 Weakly correlated
214 L1PA3 13 n.s 19.6 Weakly correlated
215 L1PA6 13 n.s 28.9 Weakly correlated
216 LTR19A 13 **** 43.0 Weakly correlated
217 LTR25-int 13 n.s 43.0 Weakly correlated
218 LTR36 13 *** 74.0 Weakly correlated
219 LTR40a 13 n.s 99.0 Weakly correlated
220 LTR7C 13 **** 28.9 Weakly correlated
221 LTR88a 13 **** 99.0 Weakly correlated
222 MER66B 13 n.s 43.0 Weakly correlated
223 MER77 13 n.s 99.0 Weakly correlated
224 MLT1E3 13 n.s 99.0 Weakly correlated
225 THE1C 13 n.s 43.0 Weakly correlated
226 HERVP71A-int 12 * 43.0 Weakly correlated
227 L1M3f 12 n.s 87.0 Weakly correlated
228 L1MEh 12 n.s 99.0 Weakly correlated
229 LTR13A 12 *** 28.9 Weakly correlated
230 LTR35A 12 **** 43.0 Weakly correlated
231 LTR76 12 **** 74.0 Weakly correlated
232 MER48 12 **** 28.9 Weakly correlated
233 MER74A 12 n.s 99.0 Weakly correlated
234 MLT1E2 12 n.s 99.0 Weakly correlated
235 HAL1b 11 n.s 99.0 Weakly correlated
236 HERV9-int 11 n.s 28.9 Weakly correlated
237 L1MA5A 11 n.s 87.0 Weakly correlated
238 L1MB1 11 n.s 99.0 Weakly correlated
239 L1MC2 11 n.s 99.0 Weakly correlated
240 L1MCa 11 n.s 99.0 Weakly correlated
241 L1PA4 11 n.s 19.6 Weakly correlated
242 L2-1_AMi 11 ** 319.0 Weakly correlated
243 LTR16B1 11 n.s 99.0 Weakly correlated
244 LTR33A_ 11 n.s 99.0 Weakly correlated
245 LTR5_Hs 11 n.s 0.0 Weakly correlated
246 LTR9D 11 n.s 43.0 Weakly correlated
247 MER21A 11 n.s 74.0 Weakly correlated
248 MER21B 11 n.s 99.0 Weakly correlated
249 MER61F 11 **** 43.0 Weakly correlated
250 MER83 11 ** 43.0 Weakly correlated
251 MLT2B3 11 n.s 99.0 Weakly correlated
252 AluYc 10 n.s 74.0 Weakly correlated
253 AluYf1 10 n.s 19.6 Weakly correlated
254 CR1_Mam 10 n.s 99.0 Weakly correlated
255 HERVH48-int 10 * 28.9 Weakly correlated
256 HERVL18-int 10 n.s 43.0 Weakly correlated
257 HERVL40-int 10 n.s 99.0 Weakly correlated
258 L1M3c 10 n.s 99.0 Weakly correlated
259 L1ME3C 10 n.s 99.0 Weakly correlated
260 L1ME3D 10 n.s 99.0 Weakly correlated
261 L1P1 10 n.s 19.6 Weakly correlated
262 L1P4 10 n.s 74.0 Weakly correlated
263 L4_C_Mam 10 n.s 99.0 Weakly correlated
264 LTR13_ 10 **** 28.9 Weakly correlated
265 LTR25 10 ** 43.0 Weakly correlated
266 LTR40b 10 n.s 99.0 Weakly correlated
267 LTR9 10 n.s 43.0 Weakly correlated
268 MER41-int 10 n.s 74.0 Weakly correlated
269 MER52A 10 n.s 74.0 Weakly correlated
270 MER90 10 * 99.0 Weakly correlated
271 MLT2D 10 n.s 99.0 Weakly correlated
272 AluYa8 9 **** 15.2 Weakly correlated
273 CR1-3_Croc 9 * 319.0 Weakly correlated
274 ERVL-int 9 n.s 99.0 Weakly correlated
275 FAM 9 n.s 87.0 Weakly correlated
276 L1MA4A 9 n.s 87.0 Weakly correlated
277 L1PB3 9 n.s 74.0 Weakly correlated
278 L1PREC2 9 n.s 43.0 Weakly correlated
279 LTR16B2 9 n.s 99.0 Weakly correlated
280 LTR33C 9 n.s 99.0 Weakly correlated
281 LTR46 9 **** 43.0 Weakly correlated
282 LTR54 9 n.s 74.0 Weakly correlated
283 LTR56 9 n.s 74.0 Weakly correlated
284 LTR5B 9 n.s 28.9 Weakly correlated
285 LTR81B 9 n.s 99.0 Weakly correlated
286 LTR88b 9 n.s 99.0 Weakly correlated
287 MER65D 9 ** 87.0 Weakly correlated
288 SVA_E 9 n.s 0.0 Weakly correlated
289 X7A_LINE 9 *** 319.0 Weakly correlated
290 AluSq4 8 n.s 74.0 Weakly correlated
291 AluYa5 8 n.s 15.2 Weakly correlated
292 AluYb8 8 n.s 15.2 Weakly correlated
293 AluYm1 8 n.s 19.6 Weakly correlated
294 AmnSINE2 8 **** 319.0 Weakly correlated
295 HERV16-int 8 n.s 99.0 Weakly correlated
296 HERVL-int 8 n.s 74.0 Weakly correlated
297 L1M3e 8 n.s 99.0 Weakly correlated
298 L1MC 8 n.s 99.0 Weakly correlated
299 L1PBa 8 n.s 74.0 Weakly correlated
300 L4_B_Mam 8 n.s 99.0 Weakly correlated
301 LTR18A 8 **** 43.0 Weakly correlated
302 LTR23 8 * 74.0 Weakly correlated
303 LTR26 8 n.s 74.0 Weakly correlated
304 LTR3 8 **** 28.9 Weakly correlated
305 LTR40c 8 n.s 99.0 Weakly correlated
306 LTR43 8 * 74.0 Weakly correlated
307 LTR84b 8 n.s 99.0 Weakly correlated
308 LTR85b 8 n.s 99.0 Weakly correlated
309 MER39B 8 n.s 74.0 Weakly correlated
310 MER52-int 8 n.s 99.0 Weakly correlated
311 MER65C 8 n.s 74.0 Weakly correlated
312 MER90a 8 n.s 99.0 Weakly correlated
313 THE1C-int 8 n.s 43.0 Weakly correlated
314 X7C_LINE 8 *** 319.0 Weakly correlated
315 AluSq10 7 n.s 74.0 Weakly correlated
316 L1M2a 7 n.s 87.0 Weakly correlated
317 L1MA6 7 n.s 87.0 Weakly correlated
318 LTR1 7 * 43.0 Weakly correlated
319 LTR106_Mam 7 n.s 99.0 Weakly correlated
320 LTR10A 7 * 28.9 Weakly correlated
321 LTR12E 7 * 19.6 Weakly correlated
322 LTR2C 7 ** 19.6 Weakly correlated
323 LTR44 7 ** 74.0 Weakly correlated
324 LTR75B 7 *** 99.0 Weakly correlated
325 LTR85c 7 n.s 99.0 Weakly correlated
326 LTR91 7 **** 99.0 Weakly correlated
327 MER50-int 7 n.s 43.0 Weakly correlated
328 MER52C 7 n.s 74.0 Weakly correlated
329 MER76 7 n.s 99.0 Weakly correlated
330 MER89 7 n.s 99.0 Weakly correlated
331 SVA_A 7 n.s 19.6 Weakly correlated
332 THE1B-int 7 n.s 43.0 Weakly correlated
333 AluYe5 6 n.s 74.0 Weakly correlated
334 ERV24_Prim-int 6 n.s 74.0 Weakly correlated
335 HERV3-int 6 n.s 28.9 Weakly correlated
336 HERVI-int 6 n.s 28.9 Weakly correlated
337 HERVK22-int 6 n.s 43.0 Weakly correlated
338 HERVKC4-int 6 ** 28.9 Weakly correlated
339 L1M4a2 6 n.s 99.0 Weakly correlated
340 L1MA10 6 n.s 99.0 Weakly correlated
341 L1MDb 6 n.s 99.0 Weakly correlated
342 L1ME3E 6 n.s 99.0 Weakly correlated
343 L1P3 6 n.s 74.0 Weakly correlated
344 LTR101_Mam 6 n.s 99.0 Weakly correlated
345 LTR105_Mam 6 n.s 99.0 Weakly correlated
346 LTR10F 6 n.s 28.9 Weakly correlated
347 LTR15 6 * 28.9 Weakly correlated
348 LTR16D 6 n.s 99.0 Weakly correlated
349 LTR16D2 6 * 99.0 Weakly correlated
350 LTR33B 6 n.s 99.0 Weakly correlated
351 LTR43B 6 ** 74.0 Weakly correlated
352 LTR53-int 6 n.s 99.0 Weakly correlated
353 LTR57 6 ** 74.0 Weakly correlated
354 LTR64 6 * 74.0 Weakly correlated
355 LTR82A 6 n.s 99.0 Weakly correlated
356 LTR82B 6 n.s 99.0 Weakly correlated
357 MER101 6 * 74.0 Weakly correlated
358 MER21-int 6 n.s 99.0 Weakly correlated
359 MER34 6 n.s 87.0 Weakly correlated
360 MER34C2 6 n.s 74.0 Weakly correlated
361 MER34D 6 ** 74.0 Weakly correlated
362 MER4C 6 n.s 74.0 Weakly correlated
363 MER4CL34 6 n.s 43.0 Weakly correlated
364 MER4E1 6 n.s 74.0 Weakly correlated
365 MER51A 6 n.s 43.0 Weakly correlated
366 MER57B2 6 n.s 43.0 Weakly correlated
367 MER61-int 6 n.s 43.0 Weakly correlated
368 MER61D 6 * 43.0 Weakly correlated
369 MER67A 6 * 99.0 Weakly correlated
370 MER84 6 * 43.0 Weakly correlated
371 MLT1B-int 6 n.s 99.0 Weakly correlated
372 MLT1E1 6 n.s 99.0 Weakly correlated
373 MLT2B1 6 n.s 99.0 Weakly correlated
374 MSTB2 6 n.s 74.0 Weakly correlated
375 MSTC 6 n.s 74.0 Weakly correlated
376 MamRep1151 6 n.s 99.0 Weakly correlated
377 X6A_LINE 6 * 99.0 Weakly correlated
378 AluYh9 5 **** 15.2 Weakly correlated
379 HAL1M8 5 n.s 99.0 Weakly correlated
380 HERV1_LTRa 5 **** 28.9 Weakly correlated
381 HERV1_LTRc 5 **** 28.9 Weakly correlated
382 HERV9NC-int 5 n.s 19.6 Weakly correlated
383 HERVIP10B3-int 5 n.s 28.9 Weakly correlated
384 L1M4a1 5 n.s 99.0 Weakly correlated
385 L1MA5 5 n.s 87.0 Weakly correlated
386 L1ME3F 5 n.s 99.0 Weakly correlated
387 L1MEj 5 n.s 99.0 Weakly correlated
388 L5 5 n.s 99.0 Weakly correlated
389 LTR102_Mam 5 n.s 99.0 Weakly correlated
390 LTR12 5 n.s 28.9 Weakly correlated
391 LTR14 5 ** 28.9 Weakly correlated
392 LTR24 5 * 74.0 Weakly correlated
393 LTR2752 5 n.s 43.0 Weakly correlated
394 LTR32 5 n.s 43.0 Weakly correlated
395 LTR35 5 *** 43.0 Weakly correlated
396 LTR3A 5 ** 28.9 Weakly correlated
397 LTR53B 5 * 99.0 Weakly correlated
398 LTR65 5 n.s 99.0 Weakly correlated
399 LTR71B 5 n.s 43.0 Weakly correlated
400 LTR75_1 5 *** 99.0 Weakly correlated
401 LTR81A 5 n.s 99.0 Weakly correlated
402 LTR87 5 n.s 99.0 Weakly correlated
403 LTR8A 5 n.s 43.0 Weakly correlated
404 MER4B 5 n.s 74.0 Weakly correlated
405 MER4B-int 5 n.s 99.0 Weakly correlated
406 MER4D 5 n.s 74.0 Weakly correlated
407 MER4D1 5 n.s 74.0 Weakly correlated
408 MER57B1 5 n.s 43.0 Weakly correlated
409 MER61A 5 n.s 43.0 Weakly correlated
410 MER65-int 5 n.s 87.0 Weakly correlated
411 MER65A 5 n.s 74.0 Weakly correlated
412 MER66A 5 n.s 43.0 Weakly correlated
413 MER74C 5 * 99.0 Weakly correlated
414 MLT1J-int 5 n.s 99.0 Weakly correlated
415 MLT2A2 5 n.s 74.0 Weakly correlated
416 MLT2B2 5 n.s 99.0 Weakly correlated
417 MamGypLTR2c 5 n.s 99.0 Weakly correlated
418 THE1A-int 5 n.s 43.0 Weakly correlated
419 AluYh3 4 n.s 15.2 Weakly correlated
420 AluYh3a3 4 * 15.2 Weakly correlated
421 AluYk2 4 n.s 19.6 Weakly correlated
422 HERV1_LTRe 4 **** 43.0 Weakly correlated
423 HERV30-int 4 n.s 28.9 Weakly correlated
424 HERVK11-int 4 n.s 28.9 Weakly correlated
425 L1HS 4 n.s 8.6 Weakly correlated
426 L1MEg1 4 n.s 99.0 Weakly correlated
427 LTR16D1 4 * 99.0 Weakly correlated
428 LTR17 4 n.s 28.9 Weakly correlated
429 LTR18C 4 *** 43.0 Weakly correlated
430 LTR27D 4 n.s 43.0 Weakly correlated
431 LTR37B 4 n.s 99.0 Weakly correlated
432 LTR3B 4 ** 28.9 Weakly correlated
433 LTR40A1 4 n.s 99.0 Weakly correlated
434 LTR42 4 n.s 74.0 Weakly correlated
435 LTR47A2 4 * 74.0 Weakly correlated
436 LTR48 4 n.s 74.0 Weakly correlated
437 LTR71A 4 * 43.0 Weakly correlated
438 LTR72 4 * 74.0 Weakly correlated
439 LTR75 4 n.s 99.0 Weakly correlated
440 LTR88c 4 n.s 99.0 Weakly correlated
441 LTR9B 4 n.s 43.0 Weakly correlated
442 MER110 4 n.s 99.0 Weakly correlated
443 MER31-int 4 n.s 99.0 Weakly correlated
444 MER31A 4 n.s 87.0 Weakly correlated
445 MER31B 4 n.s 99.0 Weakly correlated
446 MER34A 4 n.s 99.0 Weakly correlated
447 MER4A1 4 n.s 74.0 Weakly correlated
448 MER50C 4 ** 43.0 Weakly correlated
449 MER51D 4 ** 43.0 Weakly correlated
450 MER51E 4 * 43.0 Weakly correlated
451 MER52D 4 n.s 74.0 Weakly correlated
452 MER57F 4 n.s 74.0 Weakly correlated
453 MER66-int 4 n.s 43.0 Weakly correlated
454 MER67B 4 n.s 99.0 Weakly correlated
455 MER67C 4 n.s 99.0 Weakly correlated
456 MER73 4 n.s 87.0 Weakly correlated
457 MamGypLTR1a 4 n.s 99.0 Weakly correlated
458 MamGypLTR2b 4 n.s 99.0 Weakly correlated
459 MamRep1527 4 n.s 99.0 Weakly correlated
460 Mam_R4 4 n.s 99.0 Weakly correlated
461 Penelope1_Vert 4 n.s 319.0 Weakly correlated
462 SVA_D 4 n.s 15.2 Weakly correlated
463 X9_LINE 4 * 319.0 Weakly correlated
464 AluYk3 3 n.s 19.6 Weakly correlated
465 HERV15-int 3 n.s 28.9 Weakly correlated
466 HERV1_I-int 3 n.s 43.0 Weakly correlated
467 HERVIP10F-int 3 n.s 28.9 Weakly correlated
468 L1M6B 3 n.s 99.0 Weakly correlated
469 L1M8 3 n.s 99.0 Weakly correlated
470 L1MCb 3 n.s 99.0 Weakly correlated
471 L1MEa 3 n.s 99.0 Weakly correlated
472 L1MEg2 3 n.s 99.0 Weakly correlated
473 L1PB 3 n.s 74.0 Weakly correlated
474 L1PBa1 3 n.s 74.0 Weakly correlated
475 LTR103_Mam 3 n.s 99.0 Weakly correlated
476 LTR1A1 3 n.s 43.0 Weakly correlated
477 LTR24B 3 n.s 74.0 Weakly correlated
478 LTR27C 3 n.s 43.0 Weakly correlated
479 LTR27E 3 n.s 43.0 Weakly correlated
480 LTR28C 3 n.s 43.0 Weakly correlated
481 LTR29 3 n.s 43.0 Weakly correlated
482 LTR30 3 n.s 28.9 Weakly correlated
483 LTR3B_ 3 n.s 28.9 Weakly correlated
484 LTR47A 3 n.s 74.0 Weakly correlated
485 LTR51 3 n.s 74.0 Weakly correlated
486 LTR84a 3 n.s 99.0 Weakly correlated
487 LTR86C 3 n.s 99.0 Weakly correlated
488 LTR9A1 3 n.s 43.0 Weakly correlated
489 MER110A 3 n.s 99.0 Weakly correlated
490 MER11A 3 n.s 28.9 Weakly correlated
491 MER41C 3 n.s 74.0 Weakly correlated
492 MER61B 3 n.s 43.0 Weakly correlated
493 MER72B 3 n.s 43.0 Weakly correlated
494 MER92C 3 * 99.0 Weakly correlated
495 MLT1A0-int 3 n.s 99.0 Weakly correlated
496 MLT1A1-int 3 n.s 87.0 Weakly correlated
497 MLT1J1-int 3 n.s 99.0 Weakly correlated
498 MLT2E 3 n.s 99.0 Weakly correlated
499 MSTA1 3 n.s 74.0 Weakly correlated
500 MamGyp-int 3 n.s 99.0 Weakly correlated
501 MamGypsy2-LTR 3 n.s 99.0 Weakly correlated
502 PABL_A 3 n.s 43.0 Weakly correlated
503 PABL_A-int 3 n.s 74.0 Weakly correlated
504 PABL_B-int 3 n.s 74.0 Weakly correlated
505 X7B_LINE 3 n.s 319.0 Weakly correlated
506 AluYg6 2 n.s 15.2 Weakly correlated
507 AluYh7 2 * 0.0 Weakly correlated
508 AluYi6 2 n.s 15.2 Weakly correlated
509 AluYk11 2 n.s 15.2 Weakly correlated
510 ERVL47-int 2 n.s 74.0 Weakly correlated
511 HERV35I-int 2 n.s 43.0 Weakly correlated
512 HERVFH19-int 2 n.s 43.0 Weakly correlated
513 Harlequin-int 2 n.s 74.0 Weakly correlated
514 L1M3a 2 n.s 99.0 Weakly correlated
515 L1MA7 2 n.s 87.0 Weakly correlated
516 L1MEb 2 n.s 99.0 Weakly correlated
517 L1PA12 2 n.s 74.0 Weakly correlated
518 L1PA8A 2 n.s 74.0 Weakly correlated
519 L1PB2 2 n.s 74.0 Weakly correlated
520 L1PBb 2 n.s 74.0 Weakly correlated
521 LTR10B 2 n.s 28.9 Weakly correlated
522 LTR10C 2 n.s 28.9 Weakly correlated
523 LTR10D 2 n.s 28.9 Weakly correlated
524 LTR12_ 2 n.s 28.9 Weakly correlated
525 LTR14C 2 n.s 28.9 Weakly correlated
526 LTR16B 2 n.s 99.0 Weakly correlated
527 LTR19-int 2 n.s 43.0 Weakly correlated
528 LTR26C 2 n.s 0.0 Weakly correlated
529 LTR26D 2 n.s 0.0 Weakly correlated
530 LTR34 2 n.s 74.0 Weakly correlated
531 LTR37-int 2 n.s 99.0 Weakly correlated
532 LTR43-int 2 n.s 74.0 Weakly correlated
533 LTR54B 2 n.s 74.0 Weakly correlated
534 LTR58 2 * 99.0 Weakly correlated
535 LTR60B 2 n.s 74.0 Weakly correlated
536 LTR61 2 n.s 43.0 Weakly correlated
537 LTR69 2 n.s 99.0 Weakly correlated
538 LTR77 2 n.s 94.0 Weakly correlated
539 LTR81 2 n.s 99.0 Weakly correlated
540 LTR81C 2 n.s 99.0 Weakly correlated
541 LTR83 2 n.s 99.0 Weakly correlated
542 LTR86A2 2 n.s 99.0 Weakly correlated
543 LTR86B2 2 n.s 99.0 Weakly correlated
544 LTR90A 2 n.s 99.0 Weakly correlated
545 LTR90B 2 n.s 99.0 Weakly correlated
546 MER34B-int 2 n.s 99.0 Weakly correlated
547 MER4A 2 n.s 74.0 Weakly correlated
548 MER51C 2 n.s 43.0 Weakly correlated
549 MER57A1 2 n.s 43.0 Weakly correlated
550 MER57C2 2 n.s 87.0 Weakly correlated
551 MER57D 2 n.s 87.0 Weakly correlated
552 MER66D 2 n.s 43.0 Weakly correlated
553 MER68B 2 n.s 99.0 Weakly correlated
554 MER70B 2 n.s 87.0 Weakly correlated
555 MER92B 2 n.s 99.0 Weakly correlated
556 MLT1E3-int 2 n.s 99.0 Weakly correlated
557 MLT1G-int 2 n.s 99.0 Weakly correlated
558 MLT1K-int 2 n.s 99.0 Weakly correlated
559 MLT2B5 2 n.s 87.0 Weakly correlated
560 MamGypLTR1b 2 n.s 99.0 Weakly correlated
561 MamGypLTR1d 2 n.s 99.0 Weakly correlated
562 SVA_C 2 n.s 15.2 Weakly correlated
563 SVA_F 2 n.s 0.0 Weakly correlated
564 X1_LINE 2 * 319.0 Weakly correlated
565 AluYe6 1 n.s 74.0 Weakly correlated
566 CR1-13_AMi 1 n.s 319.0 Weakly correlated
567 CR1-16_AMi 1 n.s 319.0 Weakly correlated
568 CR1-L3A_Croc 1 n.s 319.0 Weakly correlated
569 ERV24B_Prim-int 1 n.s 74.0 Weakly correlated
570 HERV1_LTRd 1 * 43.0 Weakly correlated
571 HERV4_I-int 1 n.s 43.0 Weakly correlated
572 HERV9N-int 1 n.s 19.6 Weakly correlated
573 HERVFH21-int 1 n.s 28.9 Weakly correlated
574 HERVK13-int 1 n.s 19.6 Weakly correlated
575 HERVK14C-int 1 n.s 28.9 Weakly correlated
576 HERVK3-int 1 n.s 28.9 Weakly correlated
577 HERVK9-int 1 n.s 28.9 Weakly correlated
578 HERVL66-int 1 n.s 43.0 Weakly correlated
579 HERVL74-int 1 n.s 99.0 Weakly correlated
580 HERVS71-int 1 n.s 28.9 Weakly correlated
581 HUERS-P1-int 1 n.s 43.0 Weakly correlated
582 L1M 1 n.s 74.0 Weakly correlated
583 L1M2c 1 n.s 87.0 Weakly correlated
584 L1M3b 1 n.s 99.0 Weakly correlated
585 L1P4a 1 n.s 74.0 Weakly correlated
586 L1P4d 1 n.s 74.0 Weakly correlated
587 L1PA14 1 n.s 74.0 Weakly correlated
588 LOR1-int 1 n.s 74.0 Weakly correlated
589 LOR1a 1 n.s 74.0 Weakly correlated
590 LOR1b 1 n.s 74.0 Weakly correlated
591 LTR103b_Mam 1 n.s 99.0 Weakly correlated
592 LTR107_Mam 1 n.s 99.0 Weakly correlated
593 LTR108c_Mam 1 * 99.0 Weakly correlated
594 LTR108e_Mam 1 n.s 99.0 Weakly correlated
595 LTR109A2 1 * 99.0 Weakly correlated
596 LTR10B1 1 n.s 28.9 Weakly correlated
597 LTR10E 1 n.s 28.9 Weakly correlated
598 LTR10G 1 n.s 28.9 Weakly correlated
599 LTR12D 1 n.s 19.6 Weakly correlated
600 LTR14A 1 n.s 28.9 Weakly correlated
601 LTR1B1 1 n.s 43.0 Weakly correlated
602 LTR1D1 1 n.s 43.0 Weakly correlated
603 LTR1F 1 n.s 43.0 Weakly correlated
604 LTR26E 1 n.s 74.0 Weakly correlated
605 LTR27 1 n.s 43.0 Weakly correlated
606 LTR27B 1 n.s 43.0 Weakly correlated
607 LTR28 1 n.s 43.0 Weakly correlated
608 LTR28B 1 n.s 43.0 Weakly correlated
609 LTR2B 1 n.s 19.6 Weakly correlated
610 LTR31 1 n.s 74.0 Weakly correlated
611 LTR38A1 1 n.s 74.0 Weakly correlated
612 LTR38B 1 n.s 74.0 Weakly correlated
613 LTR39 1 n.s 43.0 Weakly correlated
614 LTR47B 1 * 74.0 Weakly correlated
615 LTR47B2 1 n.s 74.0 Weakly correlated
616 LTR47B4 1 n.s 74.0 Weakly correlated
617 LTR48B 1 n.s 74.0 Weakly correlated
618 LTR49 1 n.s 74.0 Weakly correlated
619 LTR49-int 1 n.s 74.0 Weakly correlated
620 LTR57-int 1 n.s 74.0 Weakly correlated
621 LTR60 1 * 43.0 Weakly correlated
622 LTR66 1 n.s 43.0 Weakly correlated
623 LTR7 1 n.s 19.6 Weakly correlated
624 LTR7B 1 n.s 28.9 Weakly correlated
625 LTR80A 1 n.s 99.0 Weakly correlated
626 LTR81AB 1 n.s 99.0 Weakly correlated
627 MER101-int 1 n.s 74.0 Weakly correlated
628 MER11B 1 n.s 19.6 Weakly correlated
629 MER11D 1 n.s 19.6 Weakly correlated
630 MER34A1 1 n.s 99.0 Weakly correlated
631 MER34B 1 n.s 87.0 Weakly correlated
632 MER41D 1 n.s 74.0 Weakly correlated
633 MER41G 1 n.s 74.0 Weakly correlated
634 MER51-int 1 n.s 43.0 Weakly correlated
635 MER51B 1 n.s 43.0 Weakly correlated
636 MER57A-int 1 n.s 43.0 Weakly correlated
637 MER57C1 1 n.s 74.0 Weakly correlated
638 MER57E3 1 n.s 74.0 Weakly correlated
639 MER61C 1 n.s 43.0 Weakly correlated
640 MER65B 1 n.s 74.0 Weakly correlated
641 MER68-int 1 n.s 99.0 Weakly correlated
642 MER70A 1 n.s 87.0 Weakly correlated
643 MER70C 1 n.s 99.0 Weakly correlated
644 MER83B-int 1 n.s 99.0 Weakly correlated
645 MER84-int 1 n.s 74.0 Weakly correlated
646 MER92A 1 n.s 99.0 Weakly correlated
647 MER95 1 n.s 99.0 Weakly correlated
648 MLT1C-int 1 n.s 94.0 Weakly correlated
649 MLT1D-int 1 n.s 99.0 Weakly correlated
650 MLT1E 1 n.s 99.0 Weakly correlated
651 MLT1F-int 1 n.s 99.0 Weakly correlated
652 MLT1G1-int 1 n.s 99.0 Weakly correlated
653 MLT1H1-int 1 n.s 99.0 Weakly correlated
654 MLT1H2-int 1 n.s 99.0 Weakly correlated
655 MLT1I-int 1 n.s 99.0 Weakly correlated
656 MLT1J2-int 1 n.s 99.0 Weakly correlated
657 MLT1O-int 1 ** 99.0 Weakly correlated
658 MLT2A1 1 n.s 74.0 Weakly correlated
659 MLT2C2 1 n.s 99.0 Weakly correlated
660 MSTB-int 1 n.s 43.0 Weakly correlated
661 MSTD-int 1 n.s 74.0 Weakly correlated
662 MamGypLTR1c 1 n.s 99.0 Weakly correlated
663 PRIMA4_LTR 1 n.s 74.0 Weakly correlated
664 THE1A 1 n.s 43.0 Weakly correlated
665 THE1D-int 1 n.s 28.9 Weakly correlated
666 X5B_LINE 1 ** 319.0 Weakly correlated
Motif in Repeats The motif of KZFPs identified by the MEME-ChIP is present in repeats sequences. :
# Repeats name Record number Significance Emergence time(Mya) Time correlation with KZFP
1 L2a 2204 **** 99.0 Weakly correlated
2 L2b 1456 **** 99.0 Weakly correlated
3 MIRb 1158 **** 99.0 Weakly correlated
4 L2c 891 **** 99.0 Weakly correlated
5 MIR 514 n.s 99.0 Weakly correlated
6 MIRc 54 n.s 99.0 Weakly correlated
7 MIR3 28 n.s 99.0 Weakly correlated
8 L1MA3 26 n.s 74.0 Weakly correlated
9 MLT1I 26 n.s 99.0 Weakly correlated
10 L1MA2 23 n.s 74.0 Weakly correlated
11 L2 22 n.s 99.0 Weakly correlated
12 AluJb 15 n.s 74.0 Weakly correlated
13 AluJo 12 n.s 74.0 Weakly correlated
14 AluJr 11 n.s 74.0 Weakly correlated
15 L1MA1 10 n.s 74.0 Weakly correlated
16 MIR1_Amn 10 n.s 319.0 Weakly correlated
17 HAL1 9 n.s 99.0 Weakly correlated
18 L1PA16 9 n.s 74.0 Weakly correlated
19 L3 9 n.s 99.0 Weakly correlated
20 MER41B 8 n.s 74.0 Weakly correlated
21 HERV9-int 7 n.s 28.9 Weakly correlated
22 HUERS-P3-int 6 n.s 43.0 Weakly correlated
23 LTR41 6 n.s 99.0 Weakly correlated
24 MamRTE1 6 n.s 99.0 Weakly correlated
25 ERV3-16A3_I-int 5 n.s 99.0 Weakly correlated
26 L1MB7 5 n.s 99.0 Weakly correlated
27 L1MC4 5 n.s 99.0 Weakly correlated
28 MER41A 5 n.s 74.0 Weakly correlated
29 MLT1B 5 n.s 99.0 Weakly correlated
30 MLT1F2 5 n.s 99.0 Weakly correlated
31 MLT1G 5 n.s 99.0 Weakly correlated
32 ERVL-E-int 4 n.s 99.0 Weakly correlated
33 HERVK-int 4 n.s 28.9 Weakly correlated
34 L1MC3 4 n.s 99.0 Weakly correlated
35 L1ME1 4 n.s 99.0 Weakly correlated
36 L1ME3 4 n.s 99.0 Weakly correlated
37 L1PA13 4 n.s 74.0 Weakly correlated
38 LTR40a 4 n.s 99.0 Weakly correlated
39 LTR50 4 n.s 99.0 Weakly correlated
40 LTR53 4 n.s 99.0 Weakly correlated
41 MER72 4 n.s 43.0 Weakly correlated
42 AluSp 3 n.s 74.0 Weakly correlated
43 AluSx1 3 n.s 74.0 Weakly correlated
44 AluSx3 3 n.s 74.0 Weakly correlated
45 L1M4 3 n.s 99.0 Weakly correlated
46 L1MB3 3 n.s 99.0 Weakly correlated
47 L1MB4 3 n.s 99.0 Weakly correlated
48 L1MC1 3 n.s 99.0 Weakly correlated
49 L1MC4a 3 n.s 99.0 Weakly correlated
50 L1MDa 3 n.s 99.0 Weakly correlated
51 L1ME2 3 n.s 99.0 Weakly correlated
52 L1ME3A 3 n.s 99.0 Weakly correlated
53 L1PA15 3 n.s 74.0 Weakly correlated
54 L1PA17 3 n.s 74.0 Weakly correlated
55 L1PB3 3 n.s 74.0 Weakly correlated
56 L2-3_Crp 3 n.s 431.0 Weakly correlated
57 LTR16A 3 n.s 99.0 Weakly correlated
58 LTR19C 3 n.s 43.0 Weakly correlated
59 LTR33 3 n.s 99.0 Weakly correlated
60 LTR40c 3 n.s 99.0 Weakly correlated
61 LTR41C 3 n.s 99.0 Weakly correlated
62 LTR57 3 n.s 74.0 Weakly correlated
63 MER61E 3 n.s 43.0 Weakly correlated
64 MLT1C 3 n.s 94.0 Weakly correlated
65 MLT1J2 3 n.s 99.0 Weakly correlated
66 MLT1L 3 n.s 99.0 Weakly correlated
67 MLT2A2 3 n.s 74.0 Weakly correlated
68 MamGypLTR3a 3 n.s 99.0 Weakly correlated
69 THE1B-int 3 n.s 43.0 Weakly correlated
70 AluJr4 2 n.s 74.0 Weakly correlated
71 AluSc 2 n.s 74.0 Weakly correlated
72 AluSq2 2 n.s 74.0 Weakly correlated
73 AluSz 2 n.s 74.0 Weakly correlated
74 ERVL-B4-int 2 n.s 99.0 Weakly correlated
75 FLAM_C 2 n.s 74.0 Weakly correlated
76 HERV17-int 2 n.s 28.9 Weakly correlated
77 HERV9NC-int 2 n.s 19.6 Weakly correlated
78 HERVE-int 2 n.s 19.6 Weakly correlated
79 HERVIP10FH-int 2 n.s 28.9 Weakly correlated
80 HERVK22-int 2 n.s 43.0 Weakly correlated
81 L1M2 2 n.s 99.0 Weakly correlated
82 L1M5 2 n.s 99.0 Weakly correlated
83 L1MA4 2 n.s 87.0 Weakly correlated
84 L1MB2 2 n.s 99.0 Weakly correlated
85 L1MB8 2 n.s 99.0 Weakly correlated
86 L1MCc 2 n.s 99.0 Weakly correlated
87 L1ME3C 2 n.s 99.0 Weakly correlated
88 L1ME4b 2 n.s 99.0 Weakly correlated
89 L1MEc 2 n.s 99.0 Weakly correlated
90 L1MEd 2 n.s 99.0 Weakly correlated
91 L1P2 2 n.s 28.9 Weakly correlated
92 L1PA10 2 n.s 74.0 Weakly correlated
93 L1PA11 2 n.s 74.0 Weakly correlated
94 L1PA5 2 n.s 19.6 Weakly correlated
95 L1PB1 2 n.s 74.0 Weakly correlated
96 L1PBa 2 n.s 74.0 Weakly correlated
97 LTR10B 2 n.s 28.9 Weakly correlated
98 LTR12C 2 n.s 19.6 Weakly correlated
99 LTR16B1 2 n.s 99.0 Weakly correlated
100 LTR16C 2 n.s 99.0 Weakly correlated
101 LTR2752 2 n.s 43.0 Weakly correlated
102 LTR67B 2 n.s 99.0 Weakly correlated
103 LTR8 2 n.s 43.0 Weakly correlated
104 MER21C 2 n.s 99.0 Weakly correlated
105 MER4CL34 2 n.s 43.0 Weakly correlated
106 MER52-int 2 n.s 99.0 Weakly correlated
107 MER52A 2 n.s 74.0 Weakly correlated
108 MER61D 2 n.s 43.0 Weakly correlated
109 MER65-int 2 n.s 87.0 Weakly correlated
110 MER84 2 n.s 43.0 Weakly correlated
111 MER89 2 n.s 99.0 Weakly correlated
112 MLT1A0 2 n.s 99.0 Weakly correlated
113 MLT1F 2 n.s 99.0 Weakly correlated
114 MLT1J 2 n.s 99.0 Weakly correlated
115 MLT1O 2 n.s 99.0 Weakly correlated
116 MSTB2 2 n.s 74.0 Weakly correlated
117 THE1C-int 2 n.s 43.0 Weakly correlated
118 AluSc8 1 n.s 74.0 Weakly correlated
119 AluSx4 1 n.s 74.0 Weakly correlated
120 AluSz6 1 n.s 74.0 Weakly correlated
121 AluY 1 n.s 74.0 Weakly correlated
122 AmnSINE1 1 n.s 319.0 Weakly correlated
123 CR1_Mam 1 n.s 99.0 Weakly correlated
124 ERV3-16A3_LTR 1 n.s 99.0 Weakly correlated
125 FAM 1 n.s 87.0 Weakly correlated
126 HAL1ME 1 n.s 99.0 Weakly correlated
127 HERV9N-int 1 n.s 19.6 Weakly correlated
128 HERVH-int 1 n.s 28.9 Weakly correlated
129 HERVI-int 1 n.s 28.9 Weakly correlated
130 HERVK9-int 1 n.s 28.9 Weakly correlated
131 HERVKC4-int 1 n.s 28.9 Weakly correlated
132 HERVL-int 1 n.s 74.0 Weakly correlated
133 HERVP71A-int 1 n.s 43.0 Weakly correlated
134 HUERS-P3b-int 1 n.s 43.0 Weakly correlated
135 Harlequin-int 1 n.s 74.0 Weakly correlated
136 L1HS 1 n.s 8.6 Weakly correlated
137 L1M1 1 n.s 74.0 Weakly correlated
138 L1M3 1 n.s 99.0 Weakly correlated
139 L1M4b 1 n.s 99.0 Weakly correlated
140 L1M7 1 n.s 99.0 Weakly correlated
141 L1MA4A 1 n.s 87.0 Weakly correlated
142 L1MA5A 1 n.s 87.0 Weakly correlated
143 L1MA7 1 n.s 87.0 Weakly correlated
144 L1MA8 1 n.s 87.0 Weakly correlated
145 L1MB1 1 n.s 99.0 Weakly correlated
146 L1MB5 1 n.s 99.0 Weakly correlated
147 L1MC2 1 n.s 99.0 Weakly correlated
148 L1MC5a 1 n.s 99.0 Weakly correlated
149 L1MCa 1 n.s 99.0 Weakly correlated
150 L1MD 1 n.s 99.0 Weakly correlated
151 L1MD1 1 n.s 99.0 Weakly correlated
152 L1MD3 1 n.s 99.0 Weakly correlated
153 L1ME3Cz 1 n.s 99.0 Weakly correlated
154 L1ME3F 1 n.s 99.0 Weakly correlated
155 L1ME3G 1 n.s 99.0 Weakly correlated
156 L1MEa 1 n.s 99.0 Weakly correlated
157 L1MEf 1 n.s 99.0 Weakly correlated
158 L1PA15-16 1 n.s 74.0 Weakly correlated
159 L1PA2 1 n.s 15.2 Weakly correlated
160 L1PA3 1 n.s 19.6 Weakly correlated
161 L1PB4 1 n.s 99.0 Weakly correlated
162 L1PBa1 1 n.s 74.0 Weakly correlated
163 L3b 1 n.s 99.0 Weakly correlated
164 L4_A_Mam 1 n.s 99.0 Weakly correlated
165 L5 1 n.s 99.0 Weakly correlated
166 LTR102_Mam 1 n.s 99.0 Weakly correlated
167 LTR105_Mam 1 n.s 99.0 Weakly correlated
168 LTR14 1 n.s 28.9 Weakly correlated
169 LTR16A2 1 n.s 99.0 Weakly correlated
170 LTR16D 1 n.s 99.0 Weakly correlated
171 LTR16D2 1 n.s 99.0 Weakly correlated
172 LTR16E1 1 n.s 99.0 Weakly correlated
173 LTR21A 1 n.s 28.9 Weakly correlated
174 LTR23 1 n.s 74.0 Weakly correlated
175 LTR25 1 n.s 43.0 Weakly correlated
176 LTR25-int 1 n.s 43.0 Weakly correlated
177 LTR27E 1 n.s 43.0 Weakly correlated
178 LTR33C 1 n.s 99.0 Weakly correlated
179 LTR34 1 n.s 74.0 Weakly correlated
180 LTR36 1 n.s 74.0 Weakly correlated
181 LTR3A 1 n.s 28.9 Weakly correlated
182 LTR4 1 n.s 28.9 Weakly correlated
183 LTR40b 1 n.s 99.0 Weakly correlated
184 LTR41B 1 n.s 99.0 Weakly correlated
185 LTR45C 1 n.s 99.0 Weakly correlated
186 LTR49 1 n.s 74.0 Weakly correlated
187 LTR49-int 1 n.s 74.0 Weakly correlated
188 LTR52 1 n.s 99.0 Weakly correlated
189 LTR7 1 n.s 19.6 Weakly correlated
190 LTR71B 1 n.s 43.0 Weakly correlated
191 LTR78B 1 n.s 99.0 Weakly correlated
192 LTR80A 1 n.s 99.0 Weakly correlated
193 LTR81C 1 n.s 99.0 Weakly correlated
194 LTR82A 1 n.s 99.0 Weakly correlated
195 LTR86A2 1 n.s 99.0 Weakly correlated
196 LTR87 1 n.s 99.0 Weakly correlated
197 LTR88b 1 n.s 99.0 Weakly correlated
198 LTR8A 1 n.s 43.0 Weakly correlated
199 LTR9 1 n.s 43.0 Weakly correlated
200 MER110 1 n.s 99.0 Weakly correlated
201 MER11A 1 n.s 28.9 Weakly correlated
202 MER21B 1 n.s 99.0 Weakly correlated
203 MER34D 1 n.s 74.0 Weakly correlated
204 MER39B 1 n.s 74.0 Weakly correlated
205 MER41C 1 n.s 74.0 Weakly correlated
206 MER41E 1 n.s 74.0 Weakly correlated
207 MER49 1 n.s 43.0 Weakly correlated
208 MER4B-int 1 n.s 99.0 Weakly correlated
209 MER50 1 n.s 43.0 Weakly correlated
210 MER50-int 1 n.s 43.0 Weakly correlated
211 MER54A 1 n.s 87.0 Weakly correlated
212 MER61F 1 n.s 43.0 Weakly correlated
213 MER65A 1 n.s 74.0 Weakly correlated
214 MER65C 1 n.s 74.0 Weakly correlated
215 MER66-int 1 n.s 43.0 Weakly correlated
216 MER66B 1 n.s 43.0 Weakly correlated
217 MER68 1 n.s 99.0 Weakly correlated
218 MER74A 1 n.s 99.0 Weakly correlated
219 MER77 1 n.s 99.0 Weakly correlated
220 MLT1A 1 n.s 99.0 Weakly correlated
221 MLT1E1A 1 n.s 99.0 Weakly correlated
222 MLT1E2 1 n.s 99.0 Weakly correlated
223 MLT1G3 1 n.s 99.0 Weakly correlated
224 MLT1H1 1 n.s 99.0 Weakly correlated
225 MLT1H2 1 n.s 99.0 Weakly correlated
226 MLT1J-int 1 n.s 99.0 Weakly correlated
227 MLT1J1 1 n.s 99.0 Weakly correlated
228 MLT1J1-int 1 n.s 99.0 Weakly correlated
229 MLT1K 1 n.s 99.0 Weakly correlated
230 MLT1M 1 n.s 99.0 Weakly correlated
231 MLT1N2 1 n.s 99.0 Weakly correlated
232 MLT2A1 1 n.s 74.0 Weakly correlated
233 MLT2B1 1 n.s 99.0 Weakly correlated
234 MLT2B5 1 n.s 87.0 Weakly correlated
235 MSTB 1 n.s 43.0 Weakly correlated
236 MamGyp-int 1 n.s 99.0 Weakly correlated
237 MamRep605 1 n.s 99.0 Weakly correlated
238 THE1B 1 n.s 43.0 Weakly correlated
239 X7C_LINE 1 n.s 319.0 Weakly correlated
Motif in Repeats Consensus The motif of KZFPs identified by MEME-ChIP analysis can be utilized to locate the corresponding region within the consensus sequences of repeats. :
# Repeats name Emergence time(Mya) Time correlation with KZFP
1 HAL1 99.0 Weakly correlated
2 HERV9-INT 28.9 Weakly correlated
3 HUERS-P3-INT 43.0 Weakly correlated
4 L1MA1 74.0 Weakly correlated
5 L1MA2 74.0 Weakly correlated
6 L2A 99.0 Weakly correlated
7 L2B 99.0 Weakly correlated
8 L2C 99.0 Weakly correlated
9 L3 99.0 Weakly correlated
10 LTR41 99.0 Weakly correlated
11 MIR 99.0 Weakly correlated
12 MIRB 99.0 Weakly correlated
13 MLT1I 99.0 Weakly correlated
14 MAMRTE1 99.0 Weakly correlated